Citrus Sinensis ID: 040731

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
Protein Sequence
ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcHccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
ATPFLAGLAIAAAALAGRYGIQAWqaiktrppkpkirkfyeggfQTTMTKREAALILGvrenatpdkvkEAHRRVMVanhpdaggshyLASKINEAKdvmlgktkgsgsaf
Flexible Loop (DISEMBL)
ATPFLAGLAIAAAALAGRYGIQAwqaiktrppkpkiRKFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVAnhpdaggshyLASKINEAKDVMLGKtkgsgsaf
Low Complexity Region (SEG)
ATPFlaglaiaaaalagRYGIQAWQAiktrppkpkirkFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF
Disordered region (IsUnstruct)
***FLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR***************************************************
Disordered Region (DISOPRED)
ATPFLAGLAIAAAALAGRYGIQ******************************AALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD*************
Disordered Region (DISEMBL)
ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF
Disordered Region (DISPRO)
ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGK********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	111	2.2.26 [Sep-21-2011]
Q8RV04	112	Mitochondrial import inne	yes	no	1.0	0.991	0.846	5e-51
Q9LYY2	112	Mitochondrial import inne	no	no	1.0	0.991	0.783	2e-41
Q9SF33	112	Mitochondrial import inne	no	no	0.846	0.839	0.808	4e-41
Q78YY6	149	DnaJ homolog subfamily C	yes	no	0.891	0.664	0.481	2e-23
Q3ZBN8	116	Mitochondrial import inne	yes	no	0.945	0.905	0.495	4e-23
Q5RF34	116	Mitochondrial import inne	yes	no	0.945	0.905	0.495	5e-23
Q96DA6	116	Mitochondrial import inne	yes	no	0.945	0.905	0.495	5e-23
Q5RCP4	150	DnaJ homolog subfamily C	no	no	0.891	0.66	0.471	5e-22
Q9Y5T4	150	DnaJ homolog subfamily C	no	no	0.891	0.66	0.471	6e-22
Q6PBT7	115	Mitochondrial import inne	no	no	0.900	0.869	0.427	1e-20

>sp|Q8RV04|TI141_ARATH Mitochondrial import inner membrane translocase subunit TIM14-1 OS=Arabidopsis thaliana GN=TIM14-1 PE=3 SV=1

 Score =  199 bits (505), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 94/111 (84%), Positives = 103/111 (92%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATPF+AG+A+AA ALAGRYGIQAWQA K RPP+PKI+KFYEGGFQ TMTKREAALILGVR
Sbjct: 2   ATPFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           E+   +KVKEAHR+VMVANHPDAGGSH+LASKINEAKDVMLGKTK SGSAF
Sbjct: 62  ESVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112

Component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYY2|TI143_ARATH Mitochondrial import inner membrane translocase subunit TIM14-3 OS=Arabidopsis thaliana GN=TIM14-3 PE=3 SV=1

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/111 (78%), Positives = 99/111 (89%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATP +AG A+AAAA+AGRYGI AWQA K RP  P++R+FYEGGFQ++MT+REAALILGVR
Sbjct: 2   ATPMIAGAAVAAAAVAGRYGILAWQAFKARPRVPRMRRFYEGGFQSSMTRREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           E+   DKVKEAHRRVMVANHPDAGGSHYLASKINEAKD+MLGK+  SGSAF
Sbjct: 62  ESVVADKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKSNNSGSAF 112

Component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF33|TI142_ARATH Mitochondrial import inner membrane translocase subunit TIM14-2 OS=Arabidopsis thaliana GN=TIM14-2 PE=3 SV=1

 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 76/94 (80%), Positives = 85/94 (90%)

Query: 18  RYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMV 77
           +YGI+AWQA K RP +P++RKFYEGGFQ TM +REAALILGVRE+   +KVKEAHRRVMV
Sbjct: 19  KYGIEAWQAFKLRPVRPRMRKFYEGGFQATMNRREAALILGVRESVAAEKVKEAHRRVMV 78

Query: 78  ANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           ANHPDAGGSHYLASKINEAKD+MLGKTK SGSAF
Sbjct: 79  ANHPDAGGSHYLASKINEAKDMMLGKTKNSGSAF 112

Component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q78YY6|DJC15_MOUSE DnaJ homolog subfamily C member 15 OS=Mus musculus GN=Dnajc15 PE=2 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 7/106 (6%)

Query: 7   GLAIAAAALAGRYGIQAWQAIKT-------RPPKPKIRKFYEGGFQTTMTKREAALILGV 59
           GL +AA A AGRY  Q W+ ++        +   P    +Y+GGF+  M+KREA+LILGV
Sbjct: 42  GLGVAAVAFAGRYAFQIWKPLEQVITATARKISSPSFSSYYKGGFEQKMSKREASLILGV 101

Query: 60  RENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
             +A   K++ AH+R+M+ NHPD GGS YLASKINEAKD++   +K
Sbjct: 102 SPSAGKAKIRTAHKRIMILNHPDKGGSPYLASKINEAKDLLEASSK 147

Mus musculus (taxid: 10090)

>sp|Q3ZBN8|TIM14_BOVIN Mitochondrial import inner membrane translocase subunit TIM14 OS=Bos taurus GN=DNAJC19 PE=3 SV=3

 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 8/113 (7%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAW--------QAIKTRPPKPKIRKFYEGGFQTTMTKRE 52
           +T    GL IAAA  AGRY +QA         Q  ++ P       +Y GGF+  MTKRE
Sbjct: 3   STVVAVGLTIAAAGFAGRYALQAMKHMEPQVKQVFQSLPKTAFSGGYYRGGFEPKMTKRE 62

Query: 53  AALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
           AALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++ G+ K
Sbjct: 63  AALILGVSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Bos taurus (taxid: 9913)

>sp|Q5RF34|TIM14_PONAB Mitochondrial import inner membrane translocase subunit TIM14 OS=Pongo abelii GN=DNAJC19 PE=3 SV=3

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 8/113 (7%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAW--------QAIKTRPPKPKIRKFYEGGFQTTMTKRE 52
           +T    GL IAAA  AGRY +QA         Q  ++ P       +Y GGF+  MTKRE
Sbjct: 3   STVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKRE 62

Query: 53  AALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
           AALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++ G+ K
Sbjct: 63  AALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Pongo abelii (taxid: 9601)

>sp|Q96DA6|TIM14_HUMAN Mitochondrial import inner membrane translocase subunit TIM14 OS=Homo sapiens GN=DNAJC19 PE=1 SV=3

 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 8/113 (7%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAW--------QAIKTRPPKPKIRKFYEGGFQTTMTKRE 52
           +T    GL IAAA  AGRY +QA         Q  ++ P       +Y GGF+  MTKRE
Sbjct: 3   STVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKSAFSGGYYRGGFEPKMTKRE 62

Query: 53  AALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
           AALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD++ G+ K
Sbjct: 63  AALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Homo sapiens (taxid: 9606)

>sp|Q5RCP4|DJC15_PONAB DnaJ homolog subfamily C member 15 OS=Pongo abelii GN=DNAJC15 PE=2 SV=1

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 7/106 (6%)

Query: 7   GLAIAAAALAGRYGIQAWQAIKT-------RPPKPKIRKFYEGGFQTTMTKREAALILGV 59
           GL +AA A AGRY  + W+ ++        +   P +  +Y+GGF+  M++REA LILGV
Sbjct: 44  GLGVAAFAFAGRYAFRIWKPLEQVITETAKKISTPSLSSYYKGGFEKKMSRREAGLILGV 103

Query: 60  RENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
             +A   K++ AHRRVM+ NHPD GGS Y+A+KINEAKD++   TK
Sbjct: 104 SPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETTTK 149

Pongo abelii (taxid: 9601)

>sp|Q9Y5T4|DJC15_HUMAN DnaJ homolog subfamily C member 15 OS=Homo sapiens GN=DNAJC15 PE=1 SV=2

 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 7/106 (6%)

Query: 7   GLAIAAAALAGRYGIQAWQAIKT-------RPPKPKIRKFYEGGFQTTMTKREAALILGV 59
           GL +AA A AGRY  + W+ ++        +   P    +Y+GGF+  M++REA LILGV
Sbjct: 44  GLGVAALAFAGRYAFRIWKPLEQVITETAKKISTPSFSSYYKGGFEQKMSRREAGLILGV 103

Query: 60  RENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
             +A   K++ AHRRVM+ NHPD GGS Y+A+KINEAKD++   TK
Sbjct: 104 SPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETTTK 149

Homo sapiens (taxid: 9606)

>sp|Q6PBT7|TIM14_DANRE Mitochondrial import inner membrane translocase subunit TIM14 OS=Danio rerio GN=dnajc19 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 73/117 (62%), Gaps = 17/117 (14%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRK------------FYEGGFQTTM 48
           +T    GL +AAA   GRY ++A + ++     P++++            +Y GGF   M
Sbjct: 3   STMVAVGLTLAAAGFTGRYAVRAMKHME-----PQVKQALEASKSAFGSGYYRGGFDPKM 57

Query: 49  TKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
            +REA+LILGV   A   K++EAHR++M+ NHPD GGS YLA+KINEAKD++ G+ K
Sbjct: 58  NRREASLILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDGQAK 114

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
18403957	112	chaperone DnaJ-domain containing protein	1.0	0.991	0.846	2e-49
297823385	112	DNAJ heat shock N-terminal domain-contai	1.0	0.991	0.819	2e-48
326498039	112	predicted protein [Hordeum vulgare subsp	1.0	0.991	0.828	2e-48
224069344	112	predicted protein [Populus trichocarpa]	1.0	0.991	0.792	1e-46
115471001	114	Os07g0192300 [Oryza sativa Japonica Grou	1.0	0.973	0.801	4e-46
414876263	112	TPA: import inner membrane translocase s	1.0	0.991	0.810	7e-46
356511849	112	PREDICTED: mitochondrial import inner me	1.0	0.991	0.891	9e-46
195639528	112	mitochondrial import inner membrane tran	1.0	0.991	0.801	1e-45
242052047	112	hypothetical protein SORBIDRAFT_03g00540	1.0	0.991	0.801	3e-45
239985483	112	mitochondrial import inner membrane tran	0.990	0.982	0.790	4e-45

>gi|18403957|ref|NP_565824.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gi|75330641|sp|Q8RV04.1|TI141_ARATH RecName: Full=Mitochondrial import inner membrane translocase subunit TIM14-1; AltName: Full=Chaperone DnaJ-domain containing protein 1 gi|20197532|gb|AAM15117.1| expressed protein [Arabidopsis thaliana] gi|20197993|gb|AAM15345.1| expressed protein [Arabidopsis thaliana] gi|21536803|gb|AAM61135.1| DNAJ protein-like [Arabidopsis thaliana] gi|110737575|dbj|BAF00729.1| hypothetical protein [Arabidopsis thaliana] gi|114050699|gb|ABI49499.1| At2g35795 [Arabidopsis thaliana] gi|330254068|gb|AEC09162.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana]

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/111 (84%), Positives = 103/111 (92%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATPF+AG+A+AA ALAGRYGIQAWQA K RPP+PKI+KFYEGGFQ TMTKREAALILGVR
Sbjct: 2   ATPFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           E+   +KVKEAHR+VMVANHPDAGGSH+LASKINEAKDVMLGKTK SGSAF
Sbjct: 62  ESVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823385|ref|XP_002879575.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325414|gb|EFH55834.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/111 (81%), Positives = 103/111 (92%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATPF+AG+A+AA ALAGRYGIQAWQA K RPP+PKI+KFY+GGFQ TMTKREAALILG+R
Sbjct: 2   ATPFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYDGGFQPTMTKREAALILGIR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           ++   +KVKEAHR+VMVANHPDAGGSH+LASKINEAKDVMLGKTK SGSAF
Sbjct: 62  QSVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326498039|dbj|BAJ94882.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326498277|dbj|BAJ98566.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326507336|dbj|BAJ95745.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/111 (82%), Positives = 100/111 (90%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATP +AGLA+AA ALAGRYGIQAWQA K RP  P++RKFYEGGFQ TMT+REA LILG+R
Sbjct: 2   ATPLIAGLAVAATALAGRYGIQAWQAYKARPIVPRMRKFYEGGFQATMTRREAGLILGIR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           EN  PDKVKEAH+RVMVANHPDAGGSHYLASKINEAKDV+LGKTKG GSAF
Sbjct: 62  ENVRPDKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLLGKTKGGGSAF 112

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069344|ref|XP_002326335.1| predicted protein [Populus trichocarpa] gi|222833528|gb|EEE72005.1| predicted protein [Populus trichocarpa]

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 88/111 (79%), Positives = 98/111 (88%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATP + G+A+AA A AGRYGIQAWQA K RPP  ++RKFYEGGFQ+ MT+REAALILGVR
Sbjct: 2   ATPLIMGMAVAATAYAGRYGIQAWQAFKARPPTARMRKFYEGGFQSVMTRREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           E+   DKVKEAHRRVMVANHPDAGGSHYLASKINEAKD++LGKTKG GSAF
Sbjct: 62  ESTAADKVKEAHRRVMVANHPDAGGSHYLASKINEAKDILLGKTKGGGSAF 112

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115471001|ref|NP_001059099.1| Os07g0192300 [Oryza sativa Japonica Group] gi|113610635|dbj|BAF21013.1| Os07g0192300, partial [Oryza sativa Japonica Group]

 Score =  188 bits (477), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 89/111 (80%), Positives = 99/111 (89%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATP +AGL +AAAALAGRY IQAW A K RP  P++RKFYEGGFQ TMT+REA LILGVR
Sbjct: 4   ATPLIAGLTVAAAALAGRYSIQAWNAYKARPVVPRMRKFYEGGFQPTMTRREAGLILGVR 63

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           ENA P+KVKEAH++VMVANHPDAGGSHYLASKINEAKD++LGKTKG GSAF
Sbjct: 64  ENAHPEKVKEAHKKVMVANHPDAGGSHYLASKINEAKDILLGKTKGGGSAF 114

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414876263|tpg|DAA53394.1| TPA: import inner membrane translocase subunit TIM14 [Zea mays]

 Score =  187 bits (475), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 90/111 (81%), Positives = 98/111 (88%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATP +AGLAIAA ALAGRYG+QAWQA K RP  P++RKFYEGGFQ TM +REAALILGVR
Sbjct: 2   ATPLIAGLAIAATALAGRYGVQAWQAYKARPIVPRMRKFYEGGFQPTMNRREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           E A  +KVKEAH+RVMVANHPDAGGSHYLASKINEAKDV+ GKTKG GSAF
Sbjct: 62  ETANAEKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLSGKTKGGGSAF 112

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511849|ref|XP_003524634.1| PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-like [Glycine max]

 Score =  187 bits (474), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 99/111 (89%), Positives = 107/111 (96%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATPFLAGLA+AAAALA RYGIQAWQA K+RPPKP++RKFYEGGFQ+TMT+REAALILGVR
Sbjct: 2   ATPFLAGLAVAAAALASRYGIQAWQAFKSRPPKPRLRKFYEGGFQSTMTRREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           ENAT DKVKEAHR+VMVANHPDAGGSHYLASKINEAKDVMLGK +GSGSAF
Sbjct: 62  ENATADKVKEAHRKVMVANHPDAGGSHYLASKINEAKDVMLGKGRGSGSAF 112

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195639528|gb|ACG39232.1| mitochondrial import inner membrane translocase subunit TIM14 [Zea mays]

 Score =  186 bits (473), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/111 (80%), Positives = 98/111 (88%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATP +AGLA+AA ALAGRYG+QAWQA K RP  P++RKFYEGGFQ TM +REAALILGVR
Sbjct: 2   ATPLIAGLAVAATALAGRYGVQAWQAYKARPIVPRMRKFYEGGFQPTMNRREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           E A  +KVKEAH+RVMVANHPDAGGSHYLASKINEAKDV+ GKTKG GSAF
Sbjct: 62  ETANAEKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLSGKTKGGGSAF 112

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242052047|ref|XP_002455169.1| hypothetical protein SORBIDRAFT_03g005400 [Sorghum bicolor] gi|241927144|gb|EES00289.1| hypothetical protein SORBIDRAFT_03g005400 [Sorghum bicolor]

 Score =  185 bits (469), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 89/111 (80%), Positives = 97/111 (87%)

Query: 1   ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVR 60
           ATP +AGLA+AA ALAGRYGIQAWQA K RP  P++RKFYEGGFQ  M +REAALILGVR
Sbjct: 2   ATPLIAGLAVAATALAGRYGIQAWQAYKARPIVPRMRKFYEGGFQPMMNRREAALILGVR 61

Query: 61  ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
           E A  +KVKEAH+RVMVANHPDAGGSHYLASKINEAKDV+ GKTKG GSAF
Sbjct: 62  ETANAEKVKEAHKRVMVANHPDAGGSHYLASKINEAKDVLSGKTKGGGSAF 112

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|239985483|ref|NP_001146932.1| mitochondrial import inner membrane translocase subunit TIM14 [Zea mays] gi|195605332|gb|ACG24496.1| mitochondrial import inner membrane translocase subunit TIM14 [Zea mays]

 Score =  184 bits (468), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/110 (79%), Positives = 97/110 (88%)

Query: 2   TPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVRE 61
           TP +AGLA+AA ALAGRYG+QAWQA K RP  P++RKFYEGGFQ TM +REAALILGVRE
Sbjct: 3   TPLIAGLAVAATALAGRYGVQAWQAYKARPIVPRMRKFYEGGFQPTMNRREAALILGVRE 62

Query: 62  NATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
            A  +KVKEAH+RVM+ANHPDAGGSHYLASKINEAKDV+ GKTKG GSAF
Sbjct: 63  TANAEKVKEAHKRVMIANHPDAGGSHYLASKINEAKDVLSGKTKGGGSAF 112

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
TAIR|locus:2828254	112	AT2G35795 [Arabidopsis thalian	1.0	0.991	0.693	1.9e-35
TAIR|locus:2143488	112	AT5G03030 "AT5G03030" [Arabido	1.0	0.991	0.657	1.2e-33
TAIR|locus:2075004	112	AT3G09700 "AT3G09700" [Arabido	0.846	0.839	0.744	8.5e-33
UNIPROTKB|Q96DA6	116	DNAJC19 "Mitochondrial import	0.603	0.577	0.611	8.3e-19
UNIPROTKB|F1SGA9	116	DNAJC19 "Uncharacterized prote	0.603	0.577	0.611	8.3e-19
UNIPROTKB|Q3ZBN8	116	DNAJC19 "Mitochondrial import	0.603	0.577	0.611	1.1e-18
ZFIN|ZDB-GENE-040801-216	149	dnajc15 "DnaJ (Hsp40) homolog,	0.558	0.416	0.645	2.2e-18
MGI|MGI:1913398	149	Dnajc15 "DnaJ (Hsp40) homolog,	0.810	0.604	0.453	4.6e-18
UNIPROTKB|A1A4R3	149	DNAJC15 "Uncharacterized prote	0.603	0.449	0.582	9.5e-18
RGD|1307154	149	Dnajc15 "DnaJ (Hsp40) homolog,	0.810	0.604	0.443	9.5e-18

TAIR|locus:2828254 AT2G35795 [Arabidopsis thaliana (taxid:3702)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 77/111 (69%), Positives = 81/111 (72%)

Query:     1 ATPFXXXXXXXXXXXXXRYGIQAWQAXXXXXXXXXXXXFYEGGFQTTMTKREAALILGVR 60
             ATPF             RYGIQAWQA            FYEGGFQ TMTKREAALILGVR
Sbjct:     2 ATPFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGVR 61

Query:    61 ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
             E+   +KVKEAHR+VMVANHPDAGGSH+LASKINEAKDVMLGKTK SGSAF
Sbjct:    62 ESVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=ISS

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2143488 AT5G03030 "AT5G03030" [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 73/111 (65%), Positives = 79/111 (71%)

Query:     1 ATPFXXXXXXXXXXXXXRYGIQAWQAXXXXXXXXXXXXFYEGGFQTTMTKREAALILGVR 60
             ATP              RYGI AWQA            FYEGGFQ++MT+REAALILGVR
Sbjct:     2 ATPMIAGAAVAAAAVAGRYGILAWQAFKARPRVPRMRRFYEGGFQSSMTRREAALILGVR 61

Query:    61 ENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
             E+   DKVKEAHRRVMVANHPDAGGSHYLASKINEAKD+MLGK+  SGSAF
Sbjct:    62 ESVVADKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKSNNSGSAF 112

GO:0006457 "protein folding" evidence=ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2075004 AT3G09700 "AT3G09700" [Arabidopsis thaliana (taxid:3702)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 70/94 (74%), Positives = 76/94 (80%)

Query:    18 RYGIQAWQAXXXXXXXXXXXXFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMV 77
             +YGI+AWQA            FYEGGFQ TM +REAALILGVRE+   +KVKEAHRRVMV
Sbjct:    19 KYGIEAWQAFKLRPVRPRMRKFYEGGFQATMNRREAALILGVRESVAAEKVKEAHRRVMV 78

Query:    78 ANHPDAGGSHYLASKINEAKDVMLGKTKGSGSAF 111
             ANHPDAGGSHYLASKINEAKD+MLGKTK SGSAF
Sbjct:    79 ANHPDAGGSHYLASKINEAKDMMLGKTKNSGSAF 112

GO:0006457 "protein folding" evidence=ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0006333 "chromatin assembly or disassembly" evidence=RCA

UNIPROTKB|Q96DA6 DNAJC19 "Mitochondrial import inner membrane translocase subunit TIM14" [Homo sapiens (taxid:9606)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query:    39 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 98
             +Y GGF+  MTKREAALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD
Sbjct:    49 YYRGGFEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKD 108

Query:    99 VMLGKTK 105
             ++ G+ K
Sbjct:   109 LLEGQAK 115

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006457 "protein folding" evidence=NAS

GO:0007601 "visual perception" evidence=IMP

GO:0016021 "integral to membrane" evidence=NAS

GO:0006626 "protein targeting to mitochondrion" evidence=NAS;TAS

GO:0048806 "genitalia development" evidence=IMP

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|F1SGA9 DNAJC19 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query:    39 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 98
             +Y GGF+  MTKREAALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD
Sbjct:    49 YYRGGFEPKMTKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKD 108

Query:    99 VMLGKTK 105
             ++ G+ K
Sbjct:   109 LLEGQAK 115

GO:0048806 "genitalia development" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q3ZBN8 DNAJC19 "Mitochondrial import inner membrane translocase subunit TIM14" [Bos taurus (taxid:9913)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query:    39 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 98
             +Y GGF+  MTKREAALILGV   A   K+++AHRR+M+ NHPD GGS Y+A+KINEAKD
Sbjct:    49 YYRGGFEPKMTKREAALILGVSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKD 108

Query:    99 VMLGKTK 105
             ++ G+ K
Sbjct:   109 LLEGQAK 115

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

ZFIN|ZDB-GENE-040801-216 dnajc15 "DnaJ (Hsp40) homolog, subfamily C, member 15" [Danio rerio (taxid:7955)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 40/62 (64%), Positives = 52/62 (83%)

Query:    39 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 98
             +Y+GGF+  MT+REA+LILG+   +T  KV+EAHRR+MV NHPD GGS YLA+KINEAKD
Sbjct:    82 YYKGGFEQKMTRREASLILGISPTSTKTKVREAHRRIMVLNHPDKGGSPYLAAKINEAKD 141

Query:    99 VM 100
             ++
Sbjct:   142 LL 143

GO:0048793 "pronephros development" evidence=IEA

MGI|MGI:1913398 Dnajc15 "DnaJ (Hsp40) homolog, subfamily C, member 15" [Mus musculus (taxid:10090)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 44/97 (45%), Positives = 60/97 (61%)

Query:    18 RYGIQAWQ-------AXXXXXXXXXXXXFYEGGFQTTMTKREAALILGVRENATPDKVKE 70
             RY  Q W+       A            +Y+GGF+  M+KREA+LILGV  +A   K++ 
Sbjct:    53 RYAFQIWKPLEQVITATARKISSPSFSSYYKGGFEQKMSKREASLILGVSPSAGKAKIRT 112

Query:    71 AHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGS 107
             AH+R+M+ NHPD GGS YLASKINEAKD++   +K +
Sbjct:   113 AHKRIMILNHPDKGGSPYLASKINEAKDLLEASSKAN 149

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A1A4R3 DNAJC15 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 39/67 (58%), Positives = 54/67 (80%)

Query:    39 FYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 98
             +Y+GGF+  M++REA+LILGV  +A+  K++ AHRR+M+ NHPD GGS YLA+KINEAKD
Sbjct:    82 YYKGGFEQKMSRREASLILGVSPSASKAKIRAAHRRIMILNHPDKGGSPYLATKINEAKD 141

Query:    99 VMLGKTK 105
             ++   TK
Sbjct:   142 LLEATTK 148

GO:0005739 "mitochondrion" evidence=IEA

RGD|1307154 Dnajc15 "DnaJ (Hsp40) homolog, subfamily C, member 15" [Rattus norvegicus (taxid:10116)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 43/97 (44%), Positives = 60/97 (61%)

Query:    18 RYGIQAWQ-------AXXXXXXXXXXXXFYEGGFQTTMTKREAALILGVRENATPDKVKE 70
             RY  Q W+       A            +Y+GGF+  M++REA+LILGV  +A   K++ 
Sbjct:    53 RYAFQIWKPLEQVLTATARKISSPSFSSYYKGGFEQKMSRREASLILGVSPSAGKAKIRT 112

Query:    71 AHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGS 107
             AH+R+M+ NHPD GGS YLASKINEAKD++   +K +
Sbjct:   113 AHKRIMILNHPDKGGSPYLASKINEAKDLLEASSKAN 149

GO:0005739 "mitochondrion" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LYY2	TI143_ARATH	No assigned EC number	0.7837	1.0	0.9910	no	no
Q5RF34	TIM14_PONAB	No assigned EC number	0.4955	0.9459	0.9051	yes	no
Q96DA6	TIM14_HUMAN	No assigned EC number	0.4955	0.9459	0.9051	yes	no
P91454	TIM14_CAEEL	No assigned EC number	0.4705	0.8738	0.8660	yes	no
Q5B4H1	TIM14_EMENI	No assigned EC number	0.4554	0.8918	0.9428	yes	no
Q3ZBN8	TIM14_BOVIN	No assigned EC number	0.4955	0.9459	0.9051	yes	no
Q4WI88	TIM14_ASPFU	No assigned EC number	0.4653	0.8918	0.9428	yes	no
Q54QN1	TIM14_DICDI	No assigned EC number	0.4036	0.9279	0.9115	yes	no
Q4I7T5	TIM14_GIBZE	No assigned EC number	0.5232	0.7387	0.7809	yes	no
Q9SF33	TI142_ARATH	No assigned EC number	0.8085	0.8468	0.8392	no	no
Q8RV04	TI141_ARATH	No assigned EC number	0.8468	1.0	0.9910	yes	no
Q9VTJ8	TIM14_DROME	No assigned EC number	0.4375	0.9009	0.8474	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT2G35795	DNAJ heat shock N-terminal domain-containing protein; DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN- heat shock protein binding; INVOLVED IN- protein folding; LOCATED IN- cellular_component unknown; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Heat shock protein DnaJ, N-terminal (InterPro-IPR001623); BEST Arabidopsis thaliana protein match is- DNAJ heat shock N-terminal domain-containing protein (TAIR-AT3G09700.1); Has 691 Blast hits to 691 proteins in 212 species- Archae - 0; Bacteria - 129; Metazoa - 169; Fung [...] (112 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	TXR1	TXR1 (THAXTOMIN A RESISTANT 1); mutant exhibited resistance to growth on media containing thaxt [...] (116 aa)					•	•	•		0.929
	AT5G61880	signaling molecule-related; signaling molecule-related; INVOLVED IN- biological_process unknown [...] (113 aa)					•	•	•		0.922
	AR192	AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodim [...] (327 aa)						•	•		0.906
	AT5G55200	co-chaperone grpE protein, putative; co-chaperone grpE protein, putative; FUNCTIONS IN- ATP bin [...] (302 aa)						•	•		0.904
	AT3G09700	DNAJ heat shock N-terminal domain-containing protein; DNAJ heat shock N-terminal domain-contain [...] (112 aa)			•		•	•	•	•	0.903
	AT5G03030	DNAJ heat shock N-terminal domain-containing protein; DNAJ heat shock N-terminal domain-contain [...] (112 aa)			•		•	•	•	•	0.903
	ATTIM17-1	ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter; m [...] (218 aa)						•	•		0.902
	TIM50	TIM50; component of a translocase in the mitochondrial inner membrane ; Essential component of [...] (376 aa)						•	•		0.902
	TIM17-3	ATTIM17-3; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter; m [...] (133 aa)						•	•		0.902
	ATTIM17-2	ATTIM17-2; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter; M [...] (243 aa)						•	•		0.900

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	111
PTZ00100	116	PTZ00100, PTZ00100, DnaJ chaperone protein; Provis	3e-23
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	3e-07
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	6e-07
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	2e-06
pfam00226	63	pfam00226, DnaJ, DnaJ domain	5e-06
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	8e-05
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	2e-04
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	3e-04
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	6e-04
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	7e-04
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	0.001
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	0.001
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	0.001
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	0.003
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	0.003
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	0.004

>gnl|CDD|240265 PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional

 Score = 86.1 bits (213), Expect = 3e-23
 Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 25/119 (21%)

Query: 3   PFLAGLAIAAAALAGRYGIQAWQ-------------------AIKTRPPKPKIRKFYEGG 43
           P +A L      LA RYG +  +                   ++ +   K  ++     G
Sbjct: 4   PIVA-LTFGGGVLAVRYGYRYLKNQKIFGSNNMSFPLSGFNPSLGSLFLKNDLK-----G 57

Query: 44  FQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLG 102
           F+  M+K EA  IL +   A+ ++++EAH+++M+ NHPD GGS Y+ASK+NEAKD++L 
Sbjct: 58  FENPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLLLK 116

Length = 116

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)

Query: 56 ILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLA----SKINEAKDV 99
          ILGV  +A+ +++K+A+R++ +  HPD       A     +INEA +V
Sbjct: 5  ILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEV 52

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 42.6 bits (101), Expect = 6e-07
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 5/50 (10%)

Query: 56  ILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLAS-----KINEAKDVM 100
           ILGV  +A+ D++K+A+R++ +  HPD        +     +INEA +V+
Sbjct: 6   ILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVL 55

Length = 60

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 44.6 bits (105), Expect = 2e-06
 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 48  MTKREAALILGVRENATPDKVKEAHRRVMVANHPD---AGGSHYLASKINEAKDVMLGKT 104
           M K++   +LGV + A+  ++++A+R++    HPD   +  +H    +INEA DV+L K 
Sbjct: 1   MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKD 60

Query: 105 K 105
           K
Sbjct: 61  K 61

Length = 372

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)

Query: 56 ILGVRENATPDKVKEAHRRVMVANHPD----AGGSHYLASKINEAKDV 99
          ILGV  +A+ +++K+A+R++ +  HPD       +     +INEA +V
Sbjct: 5  ILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEV 52

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 39.8 bits (93), Expect = 8e-05
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 42  GGFQTTMTKREAA-----LILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEA 96
           GGF     KRE        +L + ++ T  ++K+A+R++ + +HPD GG      +I+ A
Sbjct: 14  GGFDGGRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRA 73

Query: 97  KDVM 100
            +V+
Sbjct: 74  YEVL 77

Length = 421

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 98
          M+KR+   +LGV  NA+ D+VK+A+R++    HPD   +     K  E K+
Sbjct: 1  MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKE 51

Length = 371

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 56  ILGVRENATPDKVKEAHRRVMVANHPD 82
           +LGV E+    ++K A+R++M  +HPD
Sbjct: 205 VLGVSESDDDQEIKRAYRKLMSEHHPD 231

Length = 267

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 37.1 bits (86), Expect = 6e-04
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 49  TKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASK---INEAKDVM 100
            K++   ILGV  NAT +++K+A+RR+    HPD   +     K   INEA  V+
Sbjct: 1   AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVL 55

Length = 382

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 48  MTKREAA-----LILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLAS----KINEAKD 98
           M +RE         LGV  +A+ +++K+A+R++    HPDA      A      ++EA D
Sbjct: 1   MAQREWVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHD 60

Query: 99  VMLGKTK 105
           V+    K
Sbjct: 61  VLSDPAK 67

Length = 392

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 4/49 (8%)

Query: 56  ILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASK----INEAKDVM 100
           ILGV + A+P+++K+A+R++ V  HPD       A K    ++EA +V+
Sbjct: 6   ILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVL 54

Length = 391

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 48  MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLAS----KINEAKDVM 100
             K++   ILGV  NAT +++K+A+RR+    HPD       A     +INEA +++
Sbjct: 2   AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEIL 58

Length = 386

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 14/35 (40%), Positives = 23/35 (65%)

Query: 48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
            KR+   +LGV + AT D++K+A+R+  +  HPD
Sbjct: 2  AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPD 36

Length = 386

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 35.5 bits (82), Expect = 0.003
 Identities = 14/35 (40%), Positives = 25/35 (71%)

Query: 48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
          M KR+   +LGV ++A+ D++K+A+R++    HPD
Sbjct: 1  MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPD 35

Length = 376

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 4/49 (8%)

Query: 56  ILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASK----INEAKDVM 100
           +LGV ++AT  ++K+A+R++    HPDA      A +    I+EA DV+
Sbjct: 14  VLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVL 62

Length = 389

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 34.9 bits (81), Expect = 0.004
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)

Query: 56 ILGVRENATPDKVKEAHRRVMVANHPDAG---GSHYLASKINEAKDV 99
          ILGV ++A+ +++K+A+R++    HPD      +     +INEA +V
Sbjct: 5  ILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEV 51

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	111
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	99.93
PTZ00100	116	DnaJ chaperone protein; Provisional	99.92
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	99.86
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.73
KOG3442	132	consensus Uncharacterized conserved protein [Funct	99.67
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.67
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	99.66
PHA03102	153	Small T antigen; Reviewed	99.65
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.63
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.61
PRK14296	372	chaperone protein DnaJ; Provisional	99.61
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.59
PRK14279	392	chaperone protein DnaJ; Provisional	99.58
PRK14288	369	chaperone protein DnaJ; Provisional	99.57
PRK14286	372	chaperone protein DnaJ; Provisional	99.57
PRK14282	369	chaperone protein DnaJ; Provisional	99.55
PRK14287	371	chaperone protein DnaJ; Provisional	99.55
PRK14299	291	chaperone protein DnaJ; Provisional	99.54
PRK14285	365	chaperone protein DnaJ; Provisional	99.53
PRK14276	380	chaperone protein DnaJ; Provisional	99.53
PRK10767	371	chaperone protein DnaJ; Provisional	99.52
PRK14301	373	chaperone protein DnaJ; Provisional	99.51
PRK14295	389	chaperone protein DnaJ; Provisional	99.51
PRK14280	376	chaperone protein DnaJ; Provisional	99.51
PRK14294	366	chaperone protein DnaJ; Provisional	99.51
PRK14283	378	chaperone protein DnaJ; Provisional	99.51
PRK14298	377	chaperone protein DnaJ; Provisional	99.51
PRK14297	380	chaperone protein DnaJ; Provisional	99.51
PRK14278	378	chaperone protein DnaJ; Provisional	99.5
PRK14281	397	chaperone protein DnaJ; Provisional	99.5
PRK14277	386	chaperone protein DnaJ; Provisional	99.49
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.49
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.49
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.49
PRK14291	382	chaperone protein DnaJ; Provisional	99.47
PRK14300	372	chaperone protein DnaJ; Provisional	99.46
PRK14290	365	chaperone protein DnaJ; Provisional	99.44
PHA02624	647	large T antigen; Provisional	99.44
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.44
PRK14284	391	chaperone protein DnaJ; Provisional	99.43
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.43
PRK14289	386	chaperone protein DnaJ; Provisional	99.43
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.42
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.42
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.41
PRK14292	371	chaperone protein DnaJ; Provisional	99.41
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.34
PRK14293	374	chaperone protein DnaJ; Provisional	99.33
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.29
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.29
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.27
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.23
PRK05014	171	hscB co-chaperone HscB; Provisional	99.22
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.21
PRK01356	166	hscB co-chaperone HscB; Provisional	99.2
PRK00294	173	hscB co-chaperone HscB; Provisional	99.17
PRK03578	176	hscB co-chaperone HscB; Provisional	99.17
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	99.13
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.03
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.0
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	98.99
PRK01773	173	hscB co-chaperone HscB; Provisional	98.91
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	98.82
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	98.74
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	98.7
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.69
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.65
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.37
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.09
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	97.55
PF13446	62	RPT: A repeated domain in UCH-protein	97.22
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	96.96
KOG0431	453	consensus Auxilin-like protein and related protein	96.48
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	95.16
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	92.64
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	89.7

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.93  E-value=5.1e-25  Score=145.40  Aligned_cols=105  Identities=60%  Similarity=0.940  Sum_probs=98.8

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCCchhhhhhhcCCCCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHH
Q 040731            1 ATPFLAGLAIAAAALAGRYGIQ----AWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVRENATPDKVKEAHRRVM   76 (111)
Q Consensus         1 ~~~~i~~l~i~~~~~~~r~~~~----a~~~~~~~~~~~~~~~~~~~~~~~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~   76 (111)
                      +.|+++|+.|....+-+|.+++    +||.+...+.+.....||++||+..|+..||-.||||++..+++.||+++|+.+
T Consensus         2 ~~~i~~G~gvaa~a~ag~~gl~~~~~~~qa~~~~~~~~~~~~~y~GGF~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM   81 (112)
T KOG0723|consen    2 VSPIIAGLGVAALAFAGRYGLWMKTLAKQAFKTLPKGPFFGAFYKGGFEPKMSRREAALILGVTPSLDKDKIKEAHRRIM   81 (112)
T ss_pred             chhHHHhHHHHHHHHhchhhhhchhHHHHHHHHcCCCcchhhhhhcccccccchHHHHHHhCCCccccHHHHHHHHHHHH
Confidence            4789999999999999999999    888888888778888999999999999999999999999999999999999999


Q ss_pred             HhcCCCCCCCHHHHHHHHHHHHHhcCCCC
Q 040731           77 VANHPDAGGSHYLASKINEAKDVMLGKTK  105 (111)
Q Consensus        77 ~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~  105 (111)
                      ..||||++||+|...+||+|+++|.....
T Consensus        82 ~~NHPD~GGSPYlAsKINEAKdlLe~~~~  110 (112)
T KOG0723|consen   82 LANHPDRGGSPYLASKINEAKDLLEGTSL  110 (112)
T ss_pred             HcCCCcCCCCHHHHHHHHHHHHHHhcccc
Confidence            99999999999999999999999986543

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.92  E-value=3.5e-24  Score=144.43  Aligned_cols=99  Identities=39%  Similarity=0.680  Sum_probs=86.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc----------hhhhhh----hcCCCCCCCHHHHHHHcCCCCCCCHHHH
Q 040731            3 PFLAGLAIAAAALAGRYGIQAWQAIKTRPPKP----------KIRKFY----EGGFQTTMTKREAALILGVRENATPDKV   68 (111)
Q Consensus         3 ~~i~~l~i~~~~~~~r~~~~a~~~~~~~~~~~----------~~~~~~----~~~~~~~m~~~ea~~iLgl~~~~s~~eI   68 (111)
                      ||++ +.+.++.+++|.++++|++....++++          ..+.++    ..++++.|+.+|||+||||+++++.+||
T Consensus         4 ~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~f~~~Ms~~eAy~ILGv~~~As~~eI   82 (116)
T PTZ00100          4 PIVA-LTFGGGVLAVRYGYRYLKNQKIFGSNNMSFPLSGFNPSLGSLFLKNDLKGFENPMSKSEAYKILNISPTASKERI   82 (116)
T ss_pred             hHHH-HHHhHHHHHHHHHHHHHHHHhhccCccccCCchhhhHHHHHHHhccccccccCCCCHHHHHHHcCCCCCCCHHHH
Confidence            6666 888999999999999999877766432          233433    5689999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcC
Q 040731           69 KEAHRRVMVANHPDAGGSHYLASKINEAKDVMLG  102 (111)
Q Consensus        69 k~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~  102 (111)
                      +++||+|++++|||++|+++.+++|++||++|.+
T Consensus        83 kkaYRrLa~~~HPDkgGs~~~~~kIneAyevL~k  116 (116)
T PTZ00100         83 REAHKQLMLRNHPDNGGSTYIASKVNEAKDLLLK  116 (116)
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999963

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=99.86  E-value=3.2e-22  Score=136.89  Aligned_cols=104  Identities=25%  Similarity=0.361  Sum_probs=47.1

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch-h-hhh----hhcCCCCCCCHHHHHHHcCCCCCCCHHHHHHHHHH
Q 040731            1 ATPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPK-I-RKF----YEGGFQTTMTKREAALILGVRENATPDKVKEAHRR   74 (111)
Q Consensus         1 ~~~~i~~l~i~~~~~~~r~~~~a~~~~~~~~~~~~-~-~~~----~~~~~~~~m~~~ea~~iLgl~~~~s~~eIk~~yr~   74 (111)
                      +++||++++|+|+.+++|+|.+||+|+..+.+... . +..    ........|+++||+.||||++..++++|.++|.+
T Consensus         2 a~riiaqiiv~G~~vvgRAf~~AyrQA~aa~~~a~~a~~~a~~~~~a~~~~~~Mtl~EA~~ILnv~~~~~~eeI~k~y~~   81 (127)
T PF03656_consen    2 AKRIIAQIIVTGGQVVGRAFTQAYRQAAAAAQAAAGAGQNASARGAAASNSKGMTLDEARQILNVKEELSREEIQKRYKH   81 (127)
T ss_dssp             -------------------------------------------------------HHHHHHHHT--G--SHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHhhcCCCCHHHHHHHcCCCCccCHHHHHHHHHH
Confidence            57899999999999999999999999984432211 1 111    11113348999999999999999999999999999


Q ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Q 040731           75 VMVANHPDAGGSHYLASKINEAKDVMLGKT  104 (111)
Q Consensus        75 l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~  104 (111)
                      |+..|+|++|||+|++.+|..|+|+|..+.
T Consensus        82 Lf~~Nd~~kGGSfYLQSKV~rAKErl~~El  111 (127)
T PF03656_consen   82 LFKANDPSKGGSFYLQSKVFRAKERLEQEL  111 (127)
T ss_dssp             HHHHT-CCCTS-HHHHHHHHHHHHHHHHHH
T ss_pred             HHhccCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998653

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=2.3e-18  Score=135.23  Aligned_cols=61  Identities=33%  Similarity=0.454  Sum_probs=55.8

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC-C---HHHHHHHHHHHHHhcCCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g-~---~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      |...++|+||||+.++|.+|||++||+|+++||||++. +   .++|++|++|||+|+|+++|..
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~   65 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAA   65 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            55679999999999999999999999999999999976 4   4689999999999999999864

>KOG3442 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.67  E-value=3.1e-16  Score=106.12  Aligned_cols=104  Identities=24%  Similarity=0.327  Sum_probs=85.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch-hhhhhhc-------CCCCCCCHHHHHHHcCCCCCCCHHHHHHHHH
Q 040731            2 TPFLAGLAIAAAALAGRYGIQAWQAIKTRPPKPK-IRKFYEG-------GFQTTMTKREAALILGVRENATPDKVKEAHR   73 (111)
Q Consensus         2 ~~~i~~l~i~~~~~~~r~~~~a~~~~~~~~~~~~-~~~~~~~-------~~~~~m~~~ea~~iLgl~~~~s~~eIk~~yr   73 (111)
                      +|.+++++|.|+.+++|+|.+||+|+.++..... .+.-.+.       .....|+++|+..||+|++..++++|.++|.
T Consensus         2 ~R~~aqiIi~G~qvvgrAf~~A~RQeia~s~~aa~~~~a~k~g~~~~~~~~~~~iTlqEa~qILnV~~~ln~eei~k~ye   81 (132)
T KOG3442|consen    2 ARYLAQIIIMGSQVVGRAFVQAYRQEIAASQQAAARQAAGKSGTRSAEANSNGKITLQEAQQILNVKEPLNREEIEKRYE   81 (132)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccccccccccccHHHHhhHhCCCCCCCHHHHHHHHH
Confidence            6899999999999999999999998866442211 1111111       1223599999999999999999999999999


Q ss_pred             HHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCC
Q 040731           74 RVMVANHPDAGGSHYLASKINEAKDVMLGKTK  105 (111)
Q Consensus        74 ~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~  105 (111)
                      .|+..|.+.+|||+|++.+|-.|.|.|..+.+
T Consensus        82 hLFevNdkskGGSFYLQSKVfRAkErld~El~  113 (132)
T KOG3442|consen   82 HLFEVNDKSKGGSFYLQSKVFRAKERLDEELK  113 (132)
T ss_pred             HHHhccCcccCcceeehHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999876543

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.67  E-value=7.6e-17  Score=128.92  Aligned_cols=63  Identities=22%  Similarity=0.399  Sum_probs=58.7

Q ss_pred             CCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCC
Q 040731           45 QTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        45 ~~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .+.|...++|++|||++++|.+|||++||+|+++||||++++.+.|++|++||++|+|+.+|.
T Consensus        22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~   84 (421)
T PTZ00037         22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRK   84 (421)
T ss_pred             cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHH
Confidence            445677899999999999999999999999999999999998999999999999999998874

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=5.8e-17  Score=125.29  Aligned_cols=61  Identities=28%  Similarity=0.401  Sum_probs=55.5

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH----HHHHHHHHHHHHhcCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH----YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~----~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..+.+|.|+||||+.++|..|||++||+|++++|||||.++    +.|++||.||++|+|+.+|.
T Consensus        12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk   76 (336)
T KOG0713|consen   12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRK   76 (336)
T ss_pred             hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHH
Confidence            34558999999999999999999999999999999998754    58899999999999998875

>PHA03102 Small T antigen; Reviewed

Probab=99.65  E-value=2e-16  Score=111.37  Aligned_cols=60  Identities=22%  Similarity=0.263  Sum_probs=56.6

Q ss_pred             CHHHHHHHcCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 040731           49 TKREAALILGVRENA--TPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        49 ~~~ea~~iLgl~~~~--s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      +.++++++|||++++  |.++||++||++++++|||++|+++.|++||+||++|.++..+..
T Consensus         3 e~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~   64 (153)
T PHA03102          3 ESKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLR   64 (153)
T ss_pred             hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhcc
Confidence            468999999999999  999999999999999999999999999999999999999877655

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.63  E-value=6.7e-16  Score=91.76  Aligned_cols=54  Identities=33%  Similarity=0.448  Sum_probs=49.5

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC-----CHHHHHHHHHHHHHhcCCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGG-----SHYLASKINEAKDVMLGKTK  105 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g-----~~~~~~~i~~Ay~~L~~~~~  105 (111)
                      ++|++|||+++++.++|+++|+++++.+|||+++     ..+.+.+|++||++|.++.+
T Consensus         2 ~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999987     34688999999999998753

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.61  E-value=1.4e-15  Score=88.85  Aligned_cols=51  Identities=31%  Similarity=0.438  Sum_probs=47.2

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLG  102 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~  102 (111)
                      ++|++|||+++++.++|+++|+++++.+|||++++    ...+.+|++||++|++
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999774    5788999999999975

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.61  E-value=6.4e-16  Score=121.82  Aligned_cols=60  Identities=35%  Similarity=0.527  Sum_probs=54.2

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |+..++|++|||+++++.+|||++||+|+++||||++.   ..+.|++|++||++|+|+.+|.
T Consensus         1 m~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~   63 (372)
T PRK14296          1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRK   63 (372)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhh
Confidence            45579999999999999999999999999999999964   3468999999999999998874

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.59  E-value=2.5e-15  Score=90.61  Aligned_cols=55  Identities=29%  Similarity=0.465  Sum_probs=50.2

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCC-CCH----HHHHHHHHHHHHhcCCCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAG-GSH----YLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~-g~~----~~~~~i~~Ay~~L~~~~~r  106 (111)
                      ++|+||||+++++.++|+++|+++++.+|||+. ++.    +.+..|++||++|.++.+|
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R   60 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERR   60 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHH
Confidence            589999999999999999999999999999994 455    6889999999999998765

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.58  E-value=2.4e-15  Score=119.32  Aligned_cols=58  Identities=28%  Similarity=0.389  Sum_probs=53.2

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC-C---HHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g-~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..|+|++|||+++++.+|||++||+|+++||||+++ +   .+.|++|++||++|+|+.+|.
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~   69 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK   69 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhh
Confidence            479999999999999999999999999999999975 3   368899999999999998874

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.57  E-value=1.9e-15  Score=119.05  Aligned_cols=57  Identities=25%  Similarity=0.319  Sum_probs=52.0

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC-C---HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGG-S---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g-~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||++++|.+|||++||+|+++||||++. +   .+.|++|++||++|+|+.+|.
T Consensus         3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~   63 (369)
T PRK14288          3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRA   63 (369)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHH
Confidence            58999999999999999999999999999999975 2   368999999999999998764

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.57  E-value=2.3e-15  Score=118.63  Aligned_cols=60  Identities=27%  Similarity=0.391  Sum_probs=53.8

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |+..++|++|||+++++.+|||++||+|+++||||++..    .+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~   64 (372)
T PRK14286          1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQ   64 (372)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHH
Confidence            455799999999999999999999999999999999752    368999999999999998763

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.55  E-value=4.3e-15  Score=116.91  Aligned_cols=60  Identities=32%  Similarity=0.397  Sum_probs=53.8

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-----HHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |...++|+||||+++++.+|||++||+|+++||||++..     .+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~   65 (369)
T PRK14282          1 REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRA   65 (369)
T ss_pred             CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHH
Confidence            445799999999999999999999999999999999653     358899999999999998875

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.55  E-value=5.6e-15  Score=116.43  Aligned_cols=60  Identities=33%  Similarity=0.446  Sum_probs=53.7

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |...++|++|||+++++.+|||++||+|++++|||++.+   .+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~   63 (371)
T PRK14287          1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKA   63 (371)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHH
Confidence            445689999999999999999999999999999999754   357899999999999998764

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.54  E-value=5.5e-15  Score=113.11  Aligned_cols=59  Identities=34%  Similarity=0.446  Sum_probs=52.9

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      |...++|+||||++++|.+|||++||+|++++|||++.+   .+.|++|++||++|+++.+|
T Consensus         1 m~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr   62 (291)
T PRK14299          1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKR   62 (291)
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHH
Confidence            445799999999999999999999999999999999753   36889999999999998765

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.53  E-value=9.1e-15  Score=115.04  Aligned_cols=57  Identities=28%  Similarity=0.490  Sum_probs=52.0

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|++|||+++++.+|||++||+|+++||||++++    .+.|++|++||++|+|+.+|.
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~   63 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA   63 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhH
Confidence            689999999999999999999999999999999753    257999999999999998764

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.53  E-value=1.1e-14  Score=115.15  Aligned_cols=60  Identities=27%  Similarity=0.349  Sum_probs=53.9

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |..+++|+||||+++++.+|||++||+|+++||||++.+   .+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~   63 (380)
T PRK14276          1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRA   63 (380)
T ss_pred             CCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhh
Confidence            344699999999999999999999999999999999753   478999999999999998764

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.52  E-value=1.2e-14  Score=114.46  Aligned_cols=60  Identities=33%  Similarity=0.472  Sum_probs=53.5

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-H---HHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-H---YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-~---~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |+..++|+||||+++++.+|||++||+|++++|||++++ .   +.|++|++||++|+++.+|.
T Consensus         1 ~~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~   64 (371)
T PRK10767          1 MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA   64 (371)
T ss_pred             CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhh
Confidence            455799999999999999999999999999999999753 2   57899999999999998764

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=1.4e-14  Score=114.19  Aligned_cols=60  Identities=28%  Similarity=0.433  Sum_probs=53.6

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |+..++|++|||+++++.++||++||+|++++|||++.+    .+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~   64 (373)
T PRK14301          1 MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRA   64 (373)
T ss_pred             CCCCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhh
Confidence            345799999999999999999999999999999999753    257899999999999998775

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=1.6e-14  Score=114.57  Aligned_cols=58  Identities=31%  Similarity=0.426  Sum_probs=52.4

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..++|+||||+++++.+|||++||+|+++||||++.+    .+.|++|++||++|+|+.+|.
T Consensus         8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~   69 (389)
T PRK14295          8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK   69 (389)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHH
Confidence            3699999999999999999999999999999999652    368899999999999998764

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=1.3e-14  Score=114.43  Aligned_cols=60  Identities=32%  Similarity=0.448  Sum_probs=53.7

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |...++|+||||+++++.+|||++||+|+++||||++.   ..+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~   63 (376)
T PRK14280          1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRA   63 (376)
T ss_pred             CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHH
Confidence            44579999999999999999999999999999999964   3478999999999999998764

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=1.3e-14  Score=114.02  Aligned_cols=60  Identities=30%  Similarity=0.443  Sum_probs=53.8

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |+..++|+||||+++++.+|||++||+|++++|||++.+    .+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~   64 (366)
T PRK14294          1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRG   64 (366)
T ss_pred             CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHH
Confidence            556799999999999999999999999999999999763    367899999999999997763

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=1.4e-14  Score=114.36  Aligned_cols=60  Identities=30%  Similarity=0.383  Sum_probs=53.8

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |...++|++|||+++++.+|||++||+|+++||||++.   ..+.|++|++||++|+|+.+|.
T Consensus         2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~   64 (378)
T PRK14283          2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQ   64 (378)
T ss_pred             CCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHH
Confidence            33579999999999999999999999999999999964   4578999999999999998764

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=1.9e-14  Score=113.69  Aligned_cols=58  Identities=28%  Similarity=0.396  Sum_probs=52.6

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..++|+||||+++++.+|||++||+|++++|||++.+   .+.|++|++||++|+|+.+|.
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~   64 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRA   64 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhh
Confidence            3699999999999999999999999999999999754   367899999999999998764

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=1.9e-14  Score=113.65  Aligned_cols=60  Identities=28%  Similarity=0.451  Sum_probs=53.4

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |...++|++|||+++++.+|||++||+|+++||||++.+    .+.|++|++||++|+|+.+|.
T Consensus         1 ~~~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~   64 (380)
T PRK14297          1 MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKA   64 (380)
T ss_pred             CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhC
Confidence            334699999999999999999999999999999999753    257899999999999998775

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=1.6e-14  Score=114.11  Aligned_cols=57  Identities=28%  Similarity=0.339  Sum_probs=52.4

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~---~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.+|||++||+|++++|||++++.   +.|++|++||++|+|+.+|.
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~   62 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRR   62 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhh
Confidence            5899999999999999999999999999999998764   47899999999999998774

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=2.4e-14  Score=113.75  Aligned_cols=57  Identities=30%  Similarity=0.439  Sum_probs=52.1

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.+|||++||+|++++|||++++    .+.|++|++||++|+|+.+|.
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~   63 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRR   63 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhh
Confidence            589999999999999999999999999999999764    367899999999999988764

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.49  E-value=2.5e-14  Score=113.22  Aligned_cols=57  Identities=33%  Similarity=0.446  Sum_probs=51.8

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.+|||++||+|+++||||++.+    .+.|++|++||++|+|+.+|.
T Consensus         5 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~   65 (386)
T PRK14277          5 KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRA   65 (386)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHH
Confidence            699999999999999999999999999999999753    357899999999999997764

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.49  E-value=2.1e-14  Score=111.75  Aligned_cols=57  Identities=26%  Similarity=0.368  Sum_probs=52.3

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ...|.||||+++++.+|||++||+|+++|||||+.+. +.|++|+.|||+|+|+++|.
T Consensus         4 ~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~   61 (337)
T KOG0712|consen    4 TKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKRE   61 (337)
T ss_pred             cccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHH
Confidence            4579999999999999999999999999999998765 79999999999999987763

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.49  E-value=2.7e-14  Score=109.89  Aligned_cols=59  Identities=24%  Similarity=0.348  Sum_probs=53.2

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      |+..++|++|||+++++.+|||++||+|++++|||++.   ....|++|++||++|+++.+|
T Consensus         1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr   62 (306)
T PRK10266          1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRR   62 (306)
T ss_pred             CCcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHH
Confidence            45579999999999999999999999999999999964   456889999999999998766

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.49  E-value=1.7e-13  Score=100.83  Aligned_cols=60  Identities=27%  Similarity=0.377  Sum_probs=53.9

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCC----CCCHHHHHHHHHHHHHhcCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDA----GGSHYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk----~g~~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      .+..-|+|+||||+++++..|||++||+|++++||||    .++.+.+..|++||+.|.|+..|
T Consensus        95 ~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sr  158 (230)
T KOG0721|consen   95 ERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSR  158 (230)
T ss_pred             HhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhH
Confidence            4445689999999999999999999999999999999    56778889999999999998765

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=6.1e-14  Score=110.89  Aligned_cols=57  Identities=35%  Similarity=0.425  Sum_probs=52.2

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|++|||+++++.++||++||+|++++|||++.+   .+.|++|++||++|+|+.+|.
T Consensus         3 ~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~   62 (382)
T PRK14291          3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRK   62 (382)
T ss_pred             CCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHH
Confidence            589999999999999999999999999999999753   468999999999999998764

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.46  E-value=8.4e-14  Score=109.77  Aligned_cols=57  Identities=28%  Similarity=0.364  Sum_probs=51.8

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||++++|.+|||++||++++++|||++.+   .+.|++|++||++|+|+.+|+
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~   62 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRA   62 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhh
Confidence            589999999999999999999999999999999643   468899999999999988664

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.44  E-value=1.1e-13  Score=108.88  Aligned_cols=57  Identities=30%  Similarity=0.381  Sum_probs=51.8

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-----~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.+||+++||+|++++|||++.+.     +.|++|++||++|+|+.+|.
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~   64 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRR   64 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhh
Confidence            5899999999999999999999999999999997532     67899999999999998764

>PHA02624 large T antigen; Provisional

Probab=99.44  E-value=1.6e-13  Score=113.71  Aligned_cols=59  Identities=22%  Similarity=0.269  Sum_probs=55.7

Q ss_pred             HHHHHHHcCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 040731           50 KREAALILGVRENA--TPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        50 ~~ea~~iLgl~~~~--s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      .+++|++|||++++  +.++||++||++++++|||++|+++.|++|++||++|.++.++..
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r   70 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSAR   70 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhh
Confidence            57999999999999  999999999999999999999999999999999999999877654

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.44  E-value=1.8e-13  Score=103.40  Aligned_cols=58  Identities=29%  Similarity=0.428  Sum_probs=53.7

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..+.|++|||+.+++.++||++||+|++++|||++|+    +++|.+||.||++|+|+.+|.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~   91 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRN   91 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhh
Confidence            6789999999999999999999999999999999776    368999999999999998874

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=1.4e-13  Score=109.10  Aligned_cols=56  Identities=30%  Similarity=0.469  Sum_probs=50.9

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ++|+||||+++++.+|||++||+|++++|||++.+    .+.|++|++||++|.|+.+|.
T Consensus         2 d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~   61 (391)
T PRK14284          2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRE   61 (391)
T ss_pred             CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHH
Confidence            68999999999999999999999999999999763    357899999999999997653

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.43  E-value=3.7e-13  Score=102.21  Aligned_cols=58  Identities=29%  Similarity=0.402  Sum_probs=51.4

Q ss_pred             CCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCC---C-CH-------HHHHHHHHHHHHhcCC
Q 040731           46 TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAG---G-SH-------YLASKINEAKDVMLGK  103 (111)
Q Consensus        46 ~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~---g-~~-------~~~~~i~~Ay~~L~~~  103 (111)
                      ..++..++|++||+++++|.++||++||+|+++||||+.   | ++       +.+++|++||++|++.
T Consensus       195 ~~~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        195 RGPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             CCCcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            368899999999999999999999999999999999993   2 22       4779999999999864

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=1.4e-13  Score=108.87  Aligned_cols=59  Identities=34%  Similarity=0.410  Sum_probs=52.9

Q ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           49 TKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        49 ~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ...++|++|||+++++.+||+++||+|++++|||++..    .+.|++|++||++|.|+.+|.
T Consensus         3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~   65 (386)
T PRK14289          3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRS   65 (386)
T ss_pred             ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHH
Confidence            34799999999999999999999999999999999753    367899999999999997764

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.42  E-value=1.8e-13  Score=107.03  Aligned_cols=56  Identities=30%  Similarity=0.418  Sum_probs=51.0

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ++|++|||+++++.++||++||+|++++|||++.+   .+.|++|++||++|+|+.+|.
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~   59 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRA   59 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHH
Confidence            57999999999999999999999999999999753   468999999999999998764

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.42  E-value=2.6e-13  Score=108.71  Aligned_cols=61  Identities=25%  Similarity=0.350  Sum_probs=54.2

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHhcCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-----~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      +.....+|++|||+.++++.+||++||+|+++||||++++.     +.|+.|+.||++|+|+..|.
T Consensus         4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~   69 (508)
T KOG0717|consen    4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERA   69 (508)
T ss_pred             chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhh
Confidence            34457899999999999999999999999999999997643     57899999999999997763

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.41  E-value=1.9e-13  Score=104.75  Aligned_cols=62  Identities=27%  Similarity=0.402  Sum_probs=55.5

Q ss_pred             CCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCCC
Q 040731           46 TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        46 ~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..+..+++|+|||++.+++..|||.+|++|++++|||.+.   ....|++|.+|||+|+++.+|.
T Consensus        38 ~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~  102 (288)
T KOG0715|consen   38 RIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQ  102 (288)
T ss_pred             ccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHH
Confidence            4555669999999999999999999999999999999854   4578999999999999998875

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.41  E-value=4.1e-13  Score=105.69  Aligned_cols=57  Identities=30%  Similarity=0.392  Sum_probs=52.0

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.++||++||+|++++|||++++   .+.|++|++||++|+|+.+|.
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~   61 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRA   61 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhh
Confidence            478999999999999999999999999999999864   467899999999999998764

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.34  E-value=1.9e-12  Score=103.98  Aligned_cols=60  Identities=25%  Similarity=0.318  Sum_probs=54.0

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-------HHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ....|.|.+|+++++++.+||+++||+++..+||||.-|+       +.|++|.+|||+|+|+.+|.
T Consensus         6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRa   72 (546)
T KOG0718|consen    6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRA   72 (546)
T ss_pred             cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHH
Confidence            3446999999999999999999999999999999997765       47899999999999998763

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.33  E-value=1.1e-12  Score=103.49  Aligned_cols=57  Identities=30%  Similarity=0.372  Sum_probs=51.9

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.+||+++||++++++|||++.   ..+.|+.|++||++|+++.+|.
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~   62 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRA   62 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHH
Confidence            58999999999999999999999999999999964   3478899999999999998764

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.29  E-value=3.1e-12  Score=98.35  Aligned_cols=58  Identities=24%  Similarity=0.351  Sum_probs=52.4

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-H---HHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-H---YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-~---~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..|+|.||||+++++..+|+++|+..++.+|||||.+ +   +.|+.|.+||++|.|+..|.
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~   65 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRA   65 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHH
Confidence            4699999999999999999999999999999999754 3   57899999999999987664

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.29  E-value=4.5e-12  Score=89.83  Aligned_cols=59  Identities=27%  Similarity=0.362  Sum_probs=52.9

Q ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC-CH----HHHHHHHHHHHHhcCCCCCC
Q 040731           49 TKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG-SH----YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        49 ~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g-~~----~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ...++|+||||+++++..||+++||++++++|||++. ++    +.|+.|++||++|+++.++.
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~   67 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRA   67 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHH
Confidence            4578999999999999999999999999999999965 33    78899999999999987764

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.27  E-value=4.4e-12  Score=109.00  Aligned_cols=61  Identities=23%  Similarity=0.156  Sum_probs=54.5

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .+...++|+||||+++++..+||++||+|++++|||++.+   ...|++|++||++|+|+.+|.
T Consensus       569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk  632 (1136)
T PTZ00341        569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKK  632 (1136)
T ss_pred             cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHH
Confidence            3445799999999999999999999999999999999753   357899999999999998875

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.23  E-value=6.1e-12  Score=93.71  Aligned_cols=58  Identities=21%  Similarity=0.373  Sum_probs=52.1

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC------CHHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGG------SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g------~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..+.|++|||..+++..+|+++|+++++++|||++.      ....|+.|+.||.+|.|+.+|.
T Consensus        13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~   76 (264)
T KOG0719|consen   13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRA   76 (264)
T ss_pred             ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            359999999999999999999999999999999962      3468999999999999987764

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.22  E-value=1.7e-11  Score=87.70  Aligned_cols=56  Identities=18%  Similarity=0.194  Sum_probs=48.0

Q ss_pred             HHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCCC--CH-------HHHHHHHHHHHHhcCCCCCC
Q 040731           52 EAALILGVREN--ATPDKVKEAHRRVMVANHPDAGG--SH-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        52 ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~g--~~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ++|++|||++.  .+..+|+++|+++++++|||+..  +.       ..+..||+||++|+++.+|.
T Consensus         2 ~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra   68 (171)
T PRK05014          2 DYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRA   68 (171)
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHH
Confidence            68999999996  68899999999999999999943  22       24588999999999998765

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.21  E-value=1.2e-11  Score=104.31  Aligned_cols=57  Identities=30%  Similarity=0.484  Sum_probs=51.6

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~---~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.++||++||+|++++|||++++.   ..|++|++||++|+++.+|.
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa   61 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRA   61 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHH
Confidence            4799999999999999999999999999999997653   46899999999999988765

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.20  E-value=1.8e-11  Score=87.34  Aligned_cols=57  Identities=19%  Similarity=0.254  Sum_probs=48.8

Q ss_pred             HHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCHH-------HHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVREN--ATPDKVKEAHRRVMVANHPDAGGSHY-------LASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~g~~~-------~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|++|||++.  ++..+|+++|+++++++|||+..+..       .+..||+||++|+++.+|+
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra   67 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRA   67 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            468999999997  68999999999999999999965432       2469999999999997664

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.17  E-value=4e-11  Score=86.08  Aligned_cols=60  Identities=15%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             CCHHHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCC--H-------HHHHHHHHHHHHhcCCCCCC
Q 040731           48 MTKREAALILGVREN--ATPDKVKEAHRRVMVANHPDAGGS--H-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        48 m~~~ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~g~--~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      |...++|++||+++.  .+..+|+++||++++++|||+..+  .       ..+..||+||++|+++.+|+
T Consensus         1 ~~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra   71 (173)
T PRK00294          1 MGTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRA   71 (173)
T ss_pred             CCCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhH
Confidence            345679999999998  678999999999999999999432  2       24689999999999998775

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.17  E-value=4.9e-11  Score=85.79  Aligned_cols=57  Identities=21%  Similarity=0.250  Sum_probs=48.8

Q ss_pred             HHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCCC--CH-------HHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVREN--ATPDKVKEAHRRVMVANHPDAGG--SH-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~g--~~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|++|||++.  .+..+|+++|+++++++|||+..  +.       ..+..||+||++|+++.+|.
T Consensus         6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra   73 (176)
T PRK03578          6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRA   73 (176)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHH
Confidence            689999999996  68999999999999999999943  22       12479999999999998765

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=99.13  E-value=2.7e-10  Score=98.97  Aligned_cols=74  Identities=22%  Similarity=0.334  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHhCCCCchhhhhhhcCCCCCCCHHHHHHHcCCCCC----CCHHHHHHHHHHHHHhcCCCCCC-CHHHH
Q 040731           16 AGRYGIQAWQAIKTRPPKPKIRKFYEGGFQTTMTKREAALILGVREN----ATPDKVKEAHRRVMVANHPDAGG-SHYLA   90 (111)
Q Consensus        16 ~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~m~~~ea~~iLgl~~~----~s~~eIk~~yr~l~~~~HPDk~g-~~~~~   90 (111)
                      +.|..+-+|++...+++.             .|+..+||+||.++-+    .++++||++|++|+.+||||||. .-++|
T Consensus      1259 fL~~~L~~W~~ElekKP~-------------~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEGRemF 1325 (2235)
T KOG1789|consen 1259 FLRCCLATWYNELEKKPA-------------TMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEGREMF 1325 (2235)
T ss_pred             HHHHHHHHHHHHHhcCCC-------------ccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchHHHHH
Confidence            467778899988888844             8999999999999775    34588999999999999999986 45788


Q ss_pred             HHHHHHHHHhcC
Q 040731           91 SKINEAKDVMLG  102 (111)
Q Consensus        91 ~~i~~Ay~~L~~  102 (111)
                      .++|+|||.|..
T Consensus      1326 e~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1326 ERVNKAYELLSS 1337 (2235)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999983

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.03  E-value=1.4e-10  Score=87.75  Aligned_cols=58  Identities=22%  Similarity=0.339  Sum_probs=52.3

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .+++|++||++.+++..||.++||+|+++||||++.+   ...|..|..||++|.|+..+.
T Consensus        32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt   92 (329)
T KOG0722|consen   32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRT   92 (329)
T ss_pred             chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHH
Confidence            4899999999999999999999999999999999543   457899999999999987654

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.00  E-value=3.3e-10  Score=90.99  Aligned_cols=58  Identities=21%  Similarity=0.200  Sum_probs=52.6

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~---~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..|+|.+|||+.++|.++||+.||+++...||||+-.+   +.|+.|..||++|.+..+|.
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~  294 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRK  294 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhh
Confidence            45899999999999999999999999999999997644   68899999999999988764

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=98.99  E-value=4e-10  Score=88.87  Aligned_cols=62  Identities=29%  Similarity=0.326  Sum_probs=54.5

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCHH-------HHHHHHHHHHHhcCCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHY-------LASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~~-------~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      ....+|+|+||||..++++.||-++||+|+.+||||...+.+       .|.-|..|.++|+|+++|++
T Consensus       390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrq  458 (504)
T KOG0624|consen  390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQ  458 (504)
T ss_pred             HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhh
Confidence            344689999999999999999999999999999999866554       56889999999999988764

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=98.91  E-value=1.9e-09  Score=77.42  Aligned_cols=57  Identities=12%  Similarity=0.133  Sum_probs=48.6

Q ss_pred             HHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCC--CCH-------HHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVREN--ATPDKVKEAHRRVMVANHPDAG--GSH-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~--g~~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|++||+++.  .+...++++|+++.+.+|||+.  .+.       .....||+||.+|++|.+|+
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA   69 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRA   69 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHH
Confidence            468999999987  7999999999999999999993  333       23489999999999998764

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=98.82  E-value=8.2e-09  Score=83.34  Aligned_cols=56  Identities=20%  Similarity=0.296  Sum_probs=49.1

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---------HHHHHHHHHHHHHhcCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---------HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---------~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      -|+|+||||+.+.+..+||++||+|..++||||-..         .+....|++||+.|.|..+|
T Consensus        98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~r  162 (610)
T COG5407          98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRR  162 (610)
T ss_pred             CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence            578999999999999999999999999999999432         24568999999999988665

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.74  E-value=7.9e-09  Score=82.65  Aligned_cols=59  Identities=25%  Similarity=0.421  Sum_probs=52.9

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHhcCCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-----~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      ..+||.|||+..+++..||+++||++++.||||++...     -.|+++-+||.+|.|+.++.+
T Consensus       372 Rkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r  435 (486)
T KOG0550|consen  372 RKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVR  435 (486)
T ss_pred             hhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhh
Confidence            46999999999999999999999999999999996544     368999999999999987764

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.70  E-value=1.2e-08  Score=75.56  Aligned_cols=58  Identities=28%  Similarity=0.371  Sum_probs=50.3

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHhcCCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-----~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      .++|.+|||..+++.++|+++|+++++++|||++.++     ..+.++.+||++|.++.++..
T Consensus         3 ~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~   65 (306)
T KOG0714|consen    3 KDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKI   65 (306)
T ss_pred             ccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhh
Confidence            5899999999999988999999999999999996554     246888899999999877653

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.69  E-value=2.4e-08  Score=70.61  Aligned_cols=46  Identities=15%  Similarity=0.161  Sum_probs=38.4

Q ss_pred             CCCHHHHHHHHHHHHHhcCCCCC--CCH-------HHHHHHHHHHHHhcCCCCCC
Q 040731           62 NATPDKVKEAHRRVMVANHPDAG--GSH-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        62 ~~s~~eIk~~yr~l~~~~HPDk~--g~~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      +.+..+|+++|+++++++|||+.  .+.       ..+..||+||++|+++.+|+
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra   56 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRA   56 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhH
Confidence            35789999999999999999983  221       45699999999999998775

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.65  E-value=3.4e-08  Score=72.58  Aligned_cols=53  Identities=15%  Similarity=0.265  Sum_probs=48.0

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHhcCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDVMLGKT  104 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-----~~~~~i~~Ay~~L~~~~  104 (111)
                      .+|++|.|.++++.++|+++||+|+...|||+|.++     ..|.-|..||..|.++.
T Consensus        54 NpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~  111 (250)
T KOG1150|consen   54 NPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDK  111 (250)
T ss_pred             ChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHH
Confidence            689999999999999999999999999999999876     25677899999998875

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.37  E-value=1.1e-06  Score=66.27  Aligned_cols=52  Identities=37%  Similarity=0.440  Sum_probs=46.6

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHH-Hhc
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKD-VML  101 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~-~L~  101 (111)
                      ..|+|.|||++++++.++++.+|.+|++.+|||.|.   +...|.+|.+||. +|.
T Consensus        46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq  101 (342)
T KOG0568|consen   46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQ  101 (342)
T ss_pred             HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHH
Confidence            469999999999999999999999999999999864   5678999999998 443

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.09  E-value=4.1e-06  Score=64.31  Aligned_cols=58  Identities=22%  Similarity=0.376  Sum_probs=51.1

Q ss_pred             HHHHHHcCCCCC---CCHHHHHHHHHHHHHhcCCCCC------CCHHHHHHHHHHHHHhcCCCCCCC
Q 040731           51 REAALILGVREN---ATPDKVKEAHRRVMVANHPDAG------GSHYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        51 ~ea~~iLgl~~~---~s~~eIk~~yr~l~~~~HPDk~------g~~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      .+.|.+|||+.-   +.+++|.+++++.+.+||||+.      |+...|.-|..||++|.|..+|..
T Consensus        43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~q  109 (379)
T COG5269          43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQ  109 (379)
T ss_pred             hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhh
Confidence            689999999885   7889999999999999999992      466788999999999999987754

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=97.55  E-value=0.0001  Score=52.69  Aligned_cols=50  Identities=32%  Similarity=0.498  Sum_probs=42.9

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCC---CCCHH--------HHHHHHHHHHHh
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDA---GGSHY--------LASKINEAKDVM  100 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk---~g~~~--------~~~~i~~Ay~~L  100 (111)
                      .++|.+||++...+..+|+++|++++..+|||+   .|.+.        ..++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            799999999999999999999999999999998   44443        347788888754

>PF13446 RPT: A repeated domain in UCH-protein

Probab=97.22  E-value=0.0021  Score=38.31  Aligned_cols=48  Identities=25%  Similarity=0.270  Sum_probs=38.5

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVML  101 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~  101 (111)
                      .|+.++||++||++++.+.+.|-..|+.... ..      |.....+.+|-.+|-
T Consensus         1 ~~~~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~~------P~~~~~~r~AL~~Ia   48 (62)
T PF13446_consen    1 YMDVEEAYEILGIDEDTDDDFIISAFQSKVN-DD------PSQKDTLREALRVIA   48 (62)
T ss_pred             CCCHHHHHHHhCcCCCCCHHHHHHHHHHHHH-cC------hHhHHHHHHHHHHHH
Confidence            4899999999999999999999999999888 22      345556666666655

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=96.96  E-value=0.00097  Score=47.34  Aligned_cols=59  Identities=24%  Similarity=0.315  Sum_probs=47.3

Q ss_pred             CHHHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCCC-------C--HHHHHHHHHHHHHhcCCCCCC
Q 040731           49 TKREAALILGVREN--ATPDKVKEAHRRVMVANHPDAGG-------S--HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        49 ~~~ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~g-------~--~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      +..+.|.++|....  .+++.+...|....++.|||+.+       +  .+...+||+||++|.++.+|+
T Consensus         6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA   75 (168)
T KOG3192|consen    6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARA   75 (168)
T ss_pred             hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHH
Confidence            45788999988665  67788888999999999999932       1  134689999999999997764

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=96.48  E-value=0.0037  Score=50.99  Aligned_cols=24  Identities=38%  Similarity=0.639  Sum_probs=21.5

Q ss_pred             CCCCCHHHHHHHHHHHHHhcCCCC
Q 040731           60 RENATPDKVKEAHRRVMVANHPDA   83 (111)
Q Consensus        60 ~~~~s~~eIk~~yr~l~~~~HPDk   83 (111)
                      ..-++..+||++|||..+..||||
T Consensus       397 tDLVtp~~VKKaYrKA~L~VHPDK  420 (453)
T KOG0431|consen  397 TDLVTPAQVKKAYRKAVLCVHPDK  420 (453)
T ss_pred             hhccCHHHHHHHHHhhhheeCccc
Confidence            333789999999999999999999

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=95.16  E-value=0.053  Score=39.67  Aligned_cols=40  Identities=23%  Similarity=0.356  Sum_probs=35.0

Q ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCC
Q 040731           60 RENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGK  103 (111)
Q Consensus        60 ~~~~s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~  103 (111)
                      ++++|.+||++++.++..+|    +|+.....+|..|||.|.-+
T Consensus         1 S~~ASfeEIq~Arn~ll~~y----~gd~~~~~~IEaAYD~ILM~   40 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQY----AGDEKSREAIEAAYDAILME   40 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHHHH
Confidence            47899999999999999988    66788889999999988643

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=92.64  E-value=0.05  Score=38.79  Aligned_cols=43  Identities=23%  Similarity=0.223  Sum_probs=33.7

Q ss_pred             CHHHHHHHHHHHHHhcCCCCCCCH---------HHHHHHHHHHHHhcCCCCC
Q 040731           64 TPDKVKEAHRRVMVANHPDAGGSH---------YLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        64 s~~eIk~~yr~l~~~~HPDk~g~~---------~~~~~i~~Ay~~L~~~~~r  106 (111)
                      +.+.++..|+.+.+.+|||+.++.         ..+..+|.||.+|.++..+
T Consensus        16 ~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~r   67 (174)
T COG1076          16 DLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLR   67 (174)
T ss_pred             HHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence            445688999999999999995432         1347899999999987654

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=89.70  E-value=0.44  Score=31.95  Aligned_cols=42  Identities=24%  Similarity=0.280  Sum_probs=29.2

Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCCCHHHH--------HHHHHHHHHhcCCC
Q 040731           63 ATPDKVKEAHRRVMVANHPDAGGSHYLA--------SKINEAKDVMLGKT  104 (111)
Q Consensus        63 ~s~~eIk~~yr~l~~~~HPDk~g~~~~~--------~~i~~Ay~~L~~~~  104 (111)
                      .+..+++.+-|...++.|||.-+.....        +.|+.=-+.|....
T Consensus         6 ~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~   55 (112)
T PF14687_consen    6 LSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK   55 (112)
T ss_pred             hhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence            4667899999999999999985543333        45555555555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	111
2guz_A	71	Structure Of The Tim14-tim16 Complex Of The Mitocho		5e-15

>pdb|2GUZ|A Chain A, Structure Of The Tim14-tim16 Complex Of The Mitochondrial Protein Import Motor Length = 71

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 39  FYEGGFQTTMTKREAALILGVRENA-TPDKVKEAHRRVMVANHPDAGGSHYLASKINEAK 97
           F +GGF   M  +EA  IL + EN  T  K+KE HR++M+ANHPD GGS +LA+KINEAK
Sbjct: 2   FLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAK 61
Query: 98  DVM 100
           D +
Sbjct: 62  DFL 64

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	111
2guz_A	71	Mitochondrial import inner membrane translocase su	5e-31
2guz_B	65	Mitochondrial import inner membrane translocase su	5e-21
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	1e-06
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	8e-06
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	1e-05
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	1e-04
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	2e-04
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	2e-04
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	3e-04
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	5e-04
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	5e-04
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	5e-04
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	7e-04

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score =  103 bits (260), Expect = 5e-31
 Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)

Query: 39  FYEGGFQTTMTKREAALILGVRENA-TPDKVKEAHRRVMVANHPDAGGSHYLASKINEAK 97
           F +GGF   M  +EA  IL + EN  T  K+KE HR++M+ANHPD GGS +LA+KINEAK
Sbjct: 2   FLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAK 61

Query: 98  DVMLGKTK 105
           D +  +  
Sbjct: 62  DFLEKRGI 69

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 65

 Score = 78.4 bits (193), Expect = 5e-21
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 48  MTKREAALILGVRE---NATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVM 100
           MT  E+  IL + E   +   DK+      +   N  + GGS YL SK+  A + +
Sbjct: 1   MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERL 56

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 44.1 bits (104), Expect = 1e-06
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 56  ILGVRENATPDK--VKEAHRRVMVANHPDAGGSHYLASKINEAKDVM 100
           +LG+  +A  +   +++A+ +     HPD GG      K+N     M
Sbjct: 16  LLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKM 62

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 39.9 bits (93), Expect = 8e-06
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 56  ILGVRENATPD--KVKEAHRRVMVANHPDAGGSHYLASKINEAKDVM 100
           +L +      D  ++++A+++  +  HPD GGSH L  ++N      
Sbjct: 16  LLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTF 62

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 40.2 bits (94), Expect = 1e-05
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 56  ILGVRENATPDK--VKEAHRRVMVANHPDAGGSHYLASKINEAKDVM 100
           +LG+  +A  +   +++A+ +     HPD GG      K+N     M
Sbjct: 13  LLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKM 59

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 37.9 bits (88), Expect = 1e-04
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKD 98
          M K++   ILG   +A    +K+ ++++++  HPD   +   A  + E   
Sbjct: 7  MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQ 57

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 10/40 (25%), Positives = 21/40 (52%)

Query: 43 GFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
          G   +    +   +L V   A+ + +K+A+R++ +  HPD
Sbjct: 1  GSSGSSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPD 40

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 22/37 (59%)

Query: 46 TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
          ++ +  +   ILGV  NA+  ++K+A+ ++    HPD
Sbjct: 2  SSGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPD 38

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 46  TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHYLASK---INEAKDVM 100
           ++ +  +   ILGV   A+ + +K+A+RR+ +  HPD   +         I  A  V+
Sbjct: 2   SSGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVL 59

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 35.4 bits (82), Expect = 5e-04
 Identities = 12/40 (30%), Positives = 24/40 (60%)

Query: 43 GFQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
          G   +        +LGV+ +A+P+ +K+A+R++ +  HPD
Sbjct: 1  GSSGSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPD 40

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 35.4 bits (82), Expect = 5e-04
 Identities = 10/37 (27%), Positives = 22/37 (59%)

Query: 46 TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
          ++ +      ILGV ++A+  ++K+A  ++ +  HPD
Sbjct: 2  SSGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPD 38

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 10/35 (28%), Positives = 24/35 (68%)

Query: 48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
          + +     +LGV+ +A+ +++K+A+R++ +  HPD
Sbjct: 5  VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPD 39

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 35.1 bits (81), Expect = 7e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 46 TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPD 82
           + ++     +LGV   AT  ++K A+ R     HPD
Sbjct: 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPD 48

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	111
2guz_A	71	Mitochondrial import inner membrane translocase su	99.88
2guz_B	65	Mitochondrial import inner membrane translocase su	99.8
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.77
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.72
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.71
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.7
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.68
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.68
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.67
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.67
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.66
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.66
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.65
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.65
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.64
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.64
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.63
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.62
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.62
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.6
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.6
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.57
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.56
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.55
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.5
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.47
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.46
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.44
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.43
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.41
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.41
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.4
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.28
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.17
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.4

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.88  E-value=7.4e-23  Score=126.25  Aligned_cols=68  Identities=50%  Similarity=0.810  Sum_probs=64.2

Q ss_pred             hhhcCCCCCCCHHHHHHHcCCCC-CCCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCC
Q 040731           39 FYEGGFQTTMTKREAALILGVRE-NATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        39 ~~~~~~~~~m~~~ea~~iLgl~~-~~s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      |+.++++..|+.+++|+||||++ +++.++|+++||+|++++|||++|+++.|++|++||++|.++..|
T Consensus         2 ~~~g~~~~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A            2 FLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             CCCSCCCSSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCC
T ss_pred             CcCCCCCCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhc
Confidence            67889999999999999999999 799999999999999999999999999999999999999987554

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.80  E-value=1e-19  Score=110.77  Aligned_cols=56  Identities=30%  Similarity=0.440  Sum_probs=53.8

Q ss_pred             CCHHHHHHHcCCCCC---CCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCC
Q 040731           48 MTKREAALILGVREN---ATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGK  103 (111)
Q Consensus        48 m~~~ea~~iLgl~~~---~s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~  103 (111)
                      |+.+||+.||||+++   ++.++|+++||+|+..||||+|||+|++.+||+|+++|..+
T Consensus         1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            789999999999999   89999999999999999999999999999999999999754

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.77  E-value=2.4e-19  Score=112.60  Aligned_cols=61  Identities=20%  Similarity=0.264  Sum_probs=56.5

Q ss_pred             CCHHHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 040731           48 MTKREAALILGVREN--ATPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        48 m~~~ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      .+..++|+||||+++  ++.++||++||+|++++|||++|+.+.|++|++||++|+++.+|..
T Consensus         8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~   70 (79)
T 1faf_A            8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR   70 (79)
T ss_dssp             HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH
Confidence            446789999999999  9999999999999999999999999999999999999999876654

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.72  E-value=7.7e-18  Score=107.82  Aligned_cols=61  Identities=11%  Similarity=0.140  Sum_probs=55.3

Q ss_pred             CCCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-----HHHHHHHHHHHHHhcCCC
Q 040731           44 FQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDVMLGKT  104 (111)
Q Consensus        44 ~~~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-----~~~~~~i~~Ay~~L~~~~  104 (111)
                      ...+++..++|+||||+++++.++||++||+|++++|||++++     .+.|++|++||++|.+..
T Consensus         9 ~~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~   74 (88)
T 1iur_A            9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA   74 (88)
T ss_dssp             CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            3457889999999999999999999999999999999999775     468999999999999854

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=6e-18  Score=108.38  Aligned_cols=60  Identities=30%  Similarity=0.425  Sum_probs=55.4

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHHHhcCCCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAG---GSHYLASKINEAKDVMLGKTKGSGS  109 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~---g~~~~~~~i~~Ay~~L~~~~~r~~~  109 (111)
                      ..++|+||||+++++.++||++||+|++++|||++   +..+.|++|++||++|.++.+|+.+
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~~   88 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGPS   88 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccCC
Confidence            36899999999999999999999999999999997   5678999999999999999988764

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=2.2e-17  Score=107.30  Aligned_cols=63  Identities=24%  Similarity=0.216  Sum_probs=56.9

Q ss_pred             CCCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCC
Q 040731           44 FQTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        44 ~~~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      ....|+..++|+||||+++++.++||++||+|++++|||++++    .+.|++|++||++|.++.+|
T Consensus        10 ~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R   76 (99)
T 2yua_A           10 GDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLR   76 (99)
T ss_dssp             CCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHH
T ss_pred             CCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHH
Confidence            4457888999999999999999999999999999999999764    57899999999999998765

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=4.9e-17  Score=101.96  Aligned_cols=59  Identities=22%  Similarity=0.294  Sum_probs=53.0

Q ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHhcCCCCCC
Q 040731           49 TKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        49 ~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-----~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ...++|+||||+++++.++|+++|+++++++|||++++.     +.|++|++||++|+++.+|.
T Consensus         7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~   70 (82)
T 2ej7_A            7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD   70 (82)
T ss_dssp             SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHH
T ss_pred             CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence            347899999999999999999999999999999997653     47899999999999997763

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=2.8e-17  Score=102.42  Aligned_cols=61  Identities=26%  Similarity=0.328  Sum_probs=54.2

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++..++|+||||+++++.++|+++|+++++++|||++++    .+.|++|++||++|.++.+|.
T Consensus         3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~   67 (79)
T 2dn9_A            3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK   67 (79)
T ss_dssp             SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
Confidence            3455789999999999999999999999999999999764    478999999999999987653

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.67  E-value=4.7e-17  Score=103.58  Aligned_cols=59  Identities=24%  Similarity=0.305  Sum_probs=53.5

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      ++..++|+||||+++++.++|+++||+|++++|||++++   .+.|++|++||++|.++.+|
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R   65 (88)
T 2ctr_A            4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRR   65 (88)
T ss_dssp             CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHH
Confidence            445789999999999999999999999999999999876   46889999999999998665

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.67  E-value=5e-17  Score=104.28  Aligned_cols=59  Identities=24%  Similarity=0.349  Sum_probs=54.2

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCC-CCHHHHHHHHHHHHHhcCCCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAG-GSHYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~-g~~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      +...++|+||||+++++.++|+++|++|++++|||++ ++.+.|++|++||++|+++.+|
T Consensus         5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R   64 (92)
T 2o37_A            5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKR   64 (92)
T ss_dssp             CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHH
T ss_pred             ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHH
Confidence            3557999999999999999999999999999999996 6788999999999999998665

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.66  E-value=5.7e-17  Score=99.78  Aligned_cols=58  Identities=24%  Similarity=0.357  Sum_probs=52.9

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..++|+||||+++++.++|+++|+++++++|||++++ .+.|++|++||++|.++.+|.
T Consensus         7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~   65 (73)
T 2och_A            7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQ   65 (73)
T ss_dssp             CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHH
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHH
Confidence            4589999999999999999999999999999999764 689999999999999987653

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.66  E-value=3.2e-17  Score=102.00  Aligned_cols=60  Identities=27%  Similarity=0.312  Sum_probs=53.8

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      .++..++|+||||+++++.++|+++|+++++++|||++++   .+.|++|++||++|.++.+|
T Consensus         3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R   65 (78)
T 2ctp_A            3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKR   65 (78)
T ss_dssp             CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHH
Confidence            3556799999999999999999999999999999999754   46889999999999998765

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.65  E-value=3.4e-17  Score=104.98  Aligned_cols=62  Identities=18%  Similarity=0.247  Sum_probs=55.3

Q ss_pred             CCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC----------CHHHHHHHHHHHHHhcCCCCCC
Q 040731           46 TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG----------SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        46 ~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g----------~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..|...++|+||||+++++.++||++|+++++++|||++.          ..+.|++|++||++|.++.+|.
T Consensus        11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~   82 (94)
T 1wjz_A           11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKK   82 (94)
T ss_dssp             SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHH
T ss_pred             ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHH
Confidence            4577889999999999999999999999999999999964          2368899999999999998764

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.65  E-value=2.5e-17  Score=109.97  Aligned_cols=59  Identities=22%  Similarity=0.199  Sum_probs=55.7

Q ss_pred             HHHHHHHcCCCCCCCH--HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 040731           50 KREAALILGVRENATP--DKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~--~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      ..++|+||||+++++.  ++||++||+|++++|||++++.+.|++|++||++|+++.+|..
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~   67 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH   67 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHH
Confidence            4689999999999988  9999999999999999999999999999999999999988875

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.64  E-value=1.1e-16  Score=102.47  Aligned_cols=57  Identities=26%  Similarity=0.387  Sum_probs=51.7

Q ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-----HHHHHHHHHHHHHhcCCCCC
Q 040731           50 KREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        50 ~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-----~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      ..++|+||||+++++.++|+++|++|++++|||++++     .+.|++|++||++|.++.+|
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R   69 (92)
T 2dmx_A            8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR   69 (92)
T ss_dssp             CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHH
Confidence            4689999999999999999999999999999999764     36789999999999998654

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.64  E-value=1.8e-16  Score=104.70  Aligned_cols=61  Identities=26%  Similarity=0.406  Sum_probs=54.7

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++..++|+||||+++++.++||++|++|++++|||++++    .+.|++|++||++|.++.+|.
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~   77 (109)
T 2ctw_A           13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRN   77 (109)
T ss_dssp             TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHH
Confidence            4556799999999999999999999999999999999875    468899999999999987653

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.63  E-value=1.8e-16  Score=105.04  Aligned_cols=61  Identities=15%  Similarity=0.243  Sum_probs=54.8

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .+...++|+||||+++++.++||++||++++++|||++++    .+.|++|++||++|.++.+|.
T Consensus        16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~   80 (112)
T 2ctq_A           16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA   80 (112)
T ss_dssp             CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHH
Confidence            3456899999999999999999999999999999999764    578999999999999987653

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.62  E-value=1.6e-16  Score=98.52  Aligned_cols=56  Identities=29%  Similarity=0.378  Sum_probs=50.9

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      .++|+||||+++++.++|+++|+++++++|||+++   ..+.|++|++||++|+++.+|
T Consensus         3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R   61 (77)
T 1hdj_A            3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR   61 (77)
T ss_dssp             CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHH
Confidence            36899999999999999999999999999999975   357899999999999998665

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.62  E-value=2.3e-16  Score=100.32  Aligned_cols=59  Identities=20%  Similarity=0.307  Sum_probs=52.9

Q ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHHHhcCCCCCC
Q 040731           49 TKREAALILGVRENATPDKVKEAHRRVMVANHPDAGG---SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        49 ~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g---~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ...++|+||||+++++.++||++||++++++|||+++   ..+.|++|++||++|.++.+|.
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~   76 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRT   76 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHH
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHH
Confidence            3468999999999999999999999999999999975   4578999999999999987653

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.60  E-value=4.6e-16  Score=108.01  Aligned_cols=62  Identities=19%  Similarity=0.297  Sum_probs=55.0

Q ss_pred             CCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH----------HHHHHHHHHHHHhcCCCCCC
Q 040731           46 TTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH----------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        46 ~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~----------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      +.|+..++|+||||+++++.++||++||++++++|||++++.          +.|++|++||++|+|+.+|.
T Consensus         5 ~~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~   76 (155)
T 2l6l_A            5 EQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKR   76 (155)
T ss_dssp             CCCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHC
T ss_pred             ccCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence            356678999999999999999999999999999999996532          68899999999999997764

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.60  E-value=6.5e-16  Score=100.55  Aligned_cols=56  Identities=30%  Similarity=0.344  Sum_probs=50.9

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-----HHHHHHHHHHHHHhcCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-----HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-----~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      .++|+||||+++++.++||++|+++++++|||++++     .+.|++|++||++|+++.+|
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R   62 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR   62 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHH
Confidence            468999999999999999999999999999999764     36789999999999998665

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.57  E-value=7.5e-16  Score=101.40  Aligned_cols=58  Identities=17%  Similarity=0.165  Sum_probs=52.8

Q ss_pred             HHHHHHHcCCCCCC-CHHHHHHHHHHHHHhcCCCCCCC-------HHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENA-TPDKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~-s~~eIk~~yr~l~~~~HPDk~g~-------~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..++|+||||++++ +.++||++||++++++|||++++       .+.|++|++||++|+++.+|.
T Consensus        14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~   79 (109)
T 2qsa_A           14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKT   79 (109)
T ss_dssp             TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred             CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHH
Confidence            46899999999999 99999999999999999999876       468899999999999987653

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.56  E-value=2.6e-16  Score=111.91  Aligned_cols=60  Identities=22%  Similarity=0.189  Sum_probs=52.2

Q ss_pred             CHHHHHHHcCCCCCCC--HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 040731           49 TKREAALILGVRENAT--PDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        49 ~~~ea~~iLgl~~~~s--~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      ...++|+||||+++++  .++||++||++++++|||++++.+.|++|++||++|+|+.+|..
T Consensus         9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~   70 (174)
T 2pf4_E            9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH   70 (174)
T ss_dssp             HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHT
T ss_pred             ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence            3578999999999988  69999999999999999999999999999999999999877653

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.55  E-value=3.5e-16  Score=102.14  Aligned_cols=56  Identities=27%  Similarity=0.394  Sum_probs=50.8

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r  106 (111)
                      .++|+||||+++++.++||++||+|++++|||++++    .+.+++|++||++|+++.+|
T Consensus         3 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R   62 (103)
T 1bq0_A            3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR   62 (103)
T ss_dssp             CCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHH
T ss_pred             CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHH
Confidence            468999999999999999999999999999999764    46889999999999998654

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.50  E-value=1.7e-15  Score=116.74  Aligned_cols=64  Identities=23%  Similarity=0.320  Sum_probs=0.0

Q ss_pred             CCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC---HHHHHHHHHHHHHhcCCCCCCC
Q 040731           45 QTTMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS---HYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        45 ~~~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~---~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      +..|+..++|++|||+++++.+|||++||+|++++|||++.+   .+.|++|++||++|+|+.+|..
T Consensus        22 ~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~   88 (329)
T 3lz8_A           22 SNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE   88 (329)
T ss_dssp             -------------------------------------------------------------------
T ss_pred             cccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcc
Confidence            346888999999999999999999999999999999999654   4689999999999999988753

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.47  E-value=1.4e-14  Score=103.10  Aligned_cols=57  Identities=25%  Similarity=0.364  Sum_probs=51.1

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.++||++||++++++|||++++    .+.|++|++||++|+++.+|.
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~   62 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK   62 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHH
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHH
Confidence            479999999999999999999999999999999752    468899999999999987653

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.46  E-value=2.4e-14  Score=101.27  Aligned_cols=55  Identities=15%  Similarity=0.151  Sum_probs=49.4

Q ss_pred             HHHHHcCCCCCC--CHHHHHHHHHHHHHhcCCCCCCC--H-------HHHHHHHHHHHHhcCCCCC
Q 040731           52 EAALILGVRENA--TPDKVKEAHRRVMVANHPDAGGS--H-------YLASKINEAKDVMLGKTKG  106 (111)
Q Consensus        52 ea~~iLgl~~~~--s~~eIk~~yr~l~~~~HPDk~g~--~-------~~~~~i~~Ay~~L~~~~~r  106 (111)
                      ++|++|||++++  +..+|+++||++++++|||++++  .       ..|..||+||++|+++.+|
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R   67 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMR   67 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence            689999999998  99999999999999999999543  2       4689999999999998766

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.44  E-value=9.4e-15  Score=94.22  Aligned_cols=52  Identities=19%  Similarity=0.297  Sum_probs=46.3

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-------HHHHHHHHHHHHHhcC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDVMLG  102 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-------~~~~~~i~~Ay~~L~~  102 (111)
                      +..|++|||+.+++.++||++||++++++|||++.+       ...|++|++||++|.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            356999999999999999999999999999999543       3479999999999975

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.41  E-value=7.6e-14  Score=101.45  Aligned_cols=58  Identities=14%  Similarity=0.203  Sum_probs=50.1

Q ss_pred             HHHHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCCCC--H-------HHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVREN--ATPDKVKEAHRRVMVANHPDAGGS--H-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~g~--~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..++|+||||+++  ++.++|+++||+|++++|||++++  .       ..|++||+||++|+|+.+|.
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~  110 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRG  110 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence            4689999999986  789999999999999999999643  2       35699999999999987763

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.41  E-value=9.7e-15  Score=96.22  Aligned_cols=53  Identities=17%  Similarity=0.094  Sum_probs=47.2

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCC----C-------HHHHHHHHHHHHHhcCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGG----S-------HYLASKINEAKDVMLGKT  104 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g----~-------~~~~~~i~~Ay~~L~~~~  104 (111)
                      .++|+|||++. ++.++||++||++++++|||++.    +       .+.|++|++||++|+|+.
T Consensus        41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            58999999986 99999999999999999999942    3       468999999999999874

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.40  E-value=1e-14  Score=104.35  Aligned_cols=57  Identities=19%  Similarity=0.324  Sum_probs=51.6

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-------HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-------~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|++|||+++++.++||++||++++++|||++.+       .+.|++|++||++|.++.+|.
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~  180 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKP  180 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhh
Confidence            589999999999999999999999999999999532       358899999999999998875

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.28  E-value=3e-13  Score=96.51  Aligned_cols=59  Identities=14%  Similarity=0.198  Sum_probs=51.4

Q ss_pred             CHHHHHHHc------CCCC-CCCHHHHHHHHHHHHHhcCCCCCC-CHHHHHHHHHHHHHhcCCCCCC
Q 040731           49 TKREAALIL------GVRE-NATPDKVKEAHRRVMVANHPDAGG-SHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        49 ~~~ea~~iL------gl~~-~~s~~eIk~~yr~l~~~~HPDk~g-~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ...++|+||      |+++ +++..+|+++||+|++++|||+++ +...|++||+||++|+|+.+|.
T Consensus         9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~   75 (181)
T 3uo3_A            9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRS   75 (181)
T ss_dssp             CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHH
T ss_pred             CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHH
Confidence            346899999      4655 799999999999999999999976 6778999999999999987653

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.17  E-value=1.8e-12  Score=107.34  Aligned_cols=61  Identities=23%  Similarity=0.326  Sum_probs=34.1

Q ss_pred             CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           47 TMTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        47 ~m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .....++|++|||+++++.++||++||++++++|||++++    .+.|++|++||++|+|+.+|.
T Consensus        17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~   81 (780)
T 3apo_A           17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK   81 (780)
T ss_dssp             ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHH
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHH
Confidence            3445799999999999999999999999999999999753    357899999999999987653

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.40  E-value=1.3e-07  Score=70.86  Aligned_cols=57  Identities=26%  Similarity=0.299  Sum_probs=50.0

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCHH-------HHHHHHHHHHHhcCCCCCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGGSHY-------LASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~~-------~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      +.|.+||+....+.+++++.|+++++++|||+..++.       .|++|++||++|.|+.+|..
T Consensus       383 ~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~  446 (450)
T 2y4t_A          383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKK  446 (450)
T ss_dssp             CSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC--
T ss_pred             hHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHh
Confidence            5688999999999999999999999999999977654       78999999999999988753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	111
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-04
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	8e-04

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 35.7 bits (82), Expect = 1e-04
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 50  KREAALILGVRENATPDK--VKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTK 105
           K     +L +      D   +++A+++  +  HPD GGSH L  ++N        +  
Sbjct: 10  KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVY 67

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 33.8 bits (77), Expect = 8e-04
 Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 56  ILGVRENATPDKVKEAHRRVMVANHPDAGGSHY-------LASKINEAKDVMLGKTK 105
            +G+ +  TP++VK+ +R+ ++  HPD             +  ++N+A      + +
Sbjct: 38  PVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQ 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	111
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.76
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.73
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.65
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.6
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.6
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.54
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.47
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.43

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.76  E-value=1.4e-19  Score=112.40  Aligned_cols=58  Identities=21%  Similarity=0.278  Sum_probs=54.2

Q ss_pred             HHHHHHHcCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCC
Q 040731           50 KREAALILGVRENA--TPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        50 ~~ea~~iLgl~~~~--s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ..++|+||||++++  +.++|+++||++++++|||++|+++.|++||+||++|.++.+|.
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~~e~~~~in~Ay~~L~d~~~r~   69 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNL   69 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHCCHHHHH
Confidence            57999999999987  89999999999999999999999999999999999999987654

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.73  E-value=4.2e-19  Score=116.69  Aligned_cols=59  Identities=22%  Similarity=0.215  Sum_probs=54.6

Q ss_pred             HHHHHHHcCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC
Q 040731           50 KREAALILGVRENA--TPDKVKEAHRRVMVANHPDAGGSHYLASKINEAKDVMLGKTKGSG  108 (111)
Q Consensus        50 ~~ea~~iLgl~~~~--s~~eIk~~yr~l~~~~HPDk~g~~~~~~~i~~Ay~~L~~~~~r~~  108 (111)
                      ..+.|+||||+.++  +.++||++||+|++++|||++|+.+.|++|++||++|+++.+|..
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~e~F~~I~~AY~vLsd~~kR~~   67 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAH   67 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHhCCHHHHHH
Confidence            46899999999998  788999999999999999999999999999999999998877653

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=1.7e-17  Score=101.69  Aligned_cols=57  Identities=26%  Similarity=0.394  Sum_probs=50.9

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGS----HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~----~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      +++|+||||++++|.++|+++|+++++.+|||++.+    ...|.+|++||++|+++.+|.
T Consensus         3 ~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~   63 (75)
T d1xbla_           3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA   63 (75)
T ss_dssp             CCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHH
T ss_pred             CCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHH
Confidence            578999999999999999999999999999999653    256899999999999997653

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=3.2e-16  Score=99.75  Aligned_cols=57  Identities=18%  Similarity=0.277  Sum_probs=50.5

Q ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH----------HHHHHHHHHHHHhcCCCCCC
Q 040731           51 REAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH----------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        51 ~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~----------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      .++|+||||+++++.++|+++|++|++++|||++...          +.|..|++||++|.++.+|.
T Consensus        16 ~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~   82 (94)
T d1wjza_          16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKK   82 (94)
T ss_dssp             SCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHH
T ss_pred             cChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            5899999999999999999999999999999995321          35799999999999998764

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.4e-16  Score=98.18  Aligned_cols=57  Identities=12%  Similarity=0.158  Sum_probs=50.3

Q ss_pred             CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH-----HHHHHHHHHHHHhcCCC
Q 040731           48 MTKREAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH-----YLASKINEAKDVMLGKT  104 (111)
Q Consensus        48 m~~~ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~-----~~~~~i~~Ay~~L~~~~  104 (111)
                      -..+++|+|||+++++|.+|||++||+|++++|||++++.     +.|++|++||++|.+..
T Consensus        13 ~~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~~~   74 (88)
T d1iura_          13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQA   74 (88)
T ss_dssp             SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999997542     46899999999997653

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.1e-15  Score=93.86  Aligned_cols=56  Identities=29%  Similarity=0.348  Sum_probs=50.6

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCCH---HHHHHHHHHHHHhcCCCCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGGSH---YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~~---~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ++|+||||++++|.++|+++|+++++++|||++.++   +.+..|++||++|.++.+|.
T Consensus         4 dyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~   62 (77)
T d1hdja_           4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE   62 (77)
T ss_dssp             CSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             ChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHH
Confidence            689999999999999999999999999999996543   67899999999999987653

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=1.9e-14  Score=87.86  Aligned_cols=56  Identities=16%  Similarity=0.197  Sum_probs=47.1

Q ss_pred             HHHHHcCCCCC--CCHHHHHHHHHHHHHhcCCCCC--CCH-------HHHHHHHHHHHHhcCCCCCC
Q 040731           52 EAALILGVREN--ATPDKVKEAHRRVMVANHPDAG--GSH-------YLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        52 ea~~iLgl~~~--~s~~eIk~~yr~l~~~~HPDk~--g~~-------~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      ++|++|||+.+  ++.++|+++|+++++.+|||+.  .+.       ..+..|++||++|+|+.+|.
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~   68 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRA   68 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            68999999986  5689999999999999999993  232       34578999999999987763

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.43  E-value=7.5e-15  Score=94.02  Aligned_cols=56  Identities=20%  Similarity=0.328  Sum_probs=50.0

Q ss_pred             HHHHHcCCCCCCCHHHHHHHHHHHHHhcCCCCCCC-------HHHHHHHHHHHHHhcCCCCCC
Q 040731           52 EAALILGVRENATPDKVKEAHRRVMVANHPDAGGS-------HYLASKINEAKDVMLGKTKGS  107 (111)
Q Consensus        52 ea~~iLgl~~~~s~~eIk~~yr~l~~~~HPDk~g~-------~~~~~~i~~Ay~~L~~~~~r~  107 (111)
                      +.|++||+++.++.++||++|+++++.+|||++.+       ...|+.|++||++|+++.+|.
T Consensus        34 ~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~   96 (98)
T d1nz6a_          34 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKP   96 (98)
T ss_dssp             CSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred             cCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHh
Confidence            45889999999999999999999999999998443       246899999999999999886