Citrus Sinensis ID: 040810

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
MEGKARNHLLLLFSFFFTAAASLQYQTFVLNSLPTPSTLSWPESVSVSESESSLPLPAPDAESSLSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRGRANGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA
ccHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEEEEEEEEEcccccccEEEEEEEccccccccccEEEEcccccccHHHHccccccccEEEEEccccccccccEEEEcccccccccEEEccccccccccEEEEEEEEEEEccEEEcccccccccccccccccEEEEcccccEEccHHHHHHHHHHHHHHHccccccccccccccccccccccEEcccEEEEEEEccEEEEccccEEEEEccccEEEEEEEEcccccEEEEEEEEEcEEEEEEccccEEEEEccccc
ccHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccEEEEEEEHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHcccccccccccccccccHcccccEEEEEEEEccccccEEEEEEcccccEEEEccccccHHHHccccccccccccEEEcccccHHHHHccccccccccccEEEEEEcccccEEEEEEEEEEEEccEEEccEEEEEcccccccEEccccEccccccccccccccccccccEEEEEEEcccccccccEEEEcccccccccccccEEEcccccEEEEEEEcEEEEccEEEEEccHHHcccccccccEEEEEcccEEEcccHHHHHHHHHHHcccHccccccccccccccEEEEEccccccccEEEEEEccEEccccHHHEEEEEccccEEEEEcccccccEEEEEcEEEccEEEEEEcccccEEccccccc
MEGKARNHLLLLFSFFFTAAASLQYQTFVlnslptpstlswpesvsvsesesslplpapdaesslslrlhhvdslsfnrtpehlfnLRIQRDVLRVKSLTAFAesavrvpprnrsrgranggfsSSVISGLaqgsgeyftrlgvgtppryVYMVLDtgsdvvwiqcapckkcysqtdpvfdpaksrsfatvpcrsplcrkldssgcnrrntclyqvsygdgsitvgdfstetltfrgTRVARVALGCGHDNEGLFVAAAGLLglgrgrlsfptqtgrrfnrkfsyclvdrstsakpssmvfgdsavsrtarftpllanpkldtfYYVELVGISVGGAHVRGITAslfkldpagnggviidsgtsvtrltrPAYIALRDAFRAGasslkrapdfslfdtcfdlsgktevkvPTVVLHFrgadvslpatnylipvdssgtfCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASrigfaprgca
MEGKARNHLLLLFSFFFTAAASLQYQTFVLNSLPTPSTLSWPESVSVSESESSLPLPAPDAESSLSLRLHHVDSLsfnrtpehlfnlriqRDVLRVKSLTafaesavrvpprnrsrgranggfsSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVfdpaksrsfatvpcrsplcrkldssgcnrrNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLsfptqtgrrfnrKFSYCLVDrstsakpssmvfgdsavsrtarfTPLLANPKLDTFYYVELVGISVGGAHVRGITASlfkldpagnggviidsgtsvtrLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIgfaprgca
MEGKARNHllllfsffftaaaslQYQTFVLNSLPTPSTlswpesvsvsesesslplpAPDAESSLSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRGRANGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVaaagllglgrgrlSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA
******NHLLLLFSFFFTAAASLQYQTFVLNSL************************************HHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAE***********************ISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDR*********VFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFA*****
****ARNHLLLLFSFFFTAAASLQYQTFVLNSLPTPS***************************************************IQRDVLRV**********************************LAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTD**F****SR***TVPCRSPLCRKLDS**CNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDR*****P**MVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRA**********FSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA
MEGKARNHLLLLFSFFFTAAASLQYQTFVLNSLPTPS*************************SSLSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRGRANGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA
*EGKARNHLLLLFSFFFTAAASLQYQTFVLNSLPTP**************************SSLSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVP**********GGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEGKARNHLLLLFSFFFTAAASLQYQTFVLNSLPTPSTLSWPESVSVSESESSLPLPAPDAESSLSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRGRANGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query480 2.2.26 [Sep-21-2011]
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.931 0.894 0.488 1e-105
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.860 0.878 0.485 4e-97
Q766C3437 Aspartic proteinase nepen N/A no 0.808 0.887 0.391 2e-71
Q766C2438 Aspartic proteinase nepen N/A no 0.812 0.890 0.380 1e-68
Q6XBF8437 Aspartic proteinase CDR1 no no 0.712 0.782 0.371 5e-58
Q3EBM5447 Probable aspartic proteas no no 0.756 0.812 0.348 9e-50
Q9LZL3453 Aspartic proteinase PCS1 no no 0.670 0.710 0.333 4e-36
Q9S9K4475 Aspartic proteinase-like no no 0.683 0.690 0.281 5e-26
Q9LX20528 Aspartic proteinase-like no no 0.660 0.600 0.277 1e-17
Q0IU52410 Aspartic proteinase Asp1 no no 0.670 0.785 0.237 3e-15
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function desciption
 Score =  382 bits (980), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/471 (48%), Positives = 296/471 (62%), Gaps = 24/471 (5%)

Query: 21  ASLQYQTFVLNSLPTPSTLSWPESVSVSESESSLPLPAPDAESSLSLRLHHVDSL--SFN 78
           +SLQ    +L+  PT S+L+  +  S+S+     P+   ++ S LSL LH  D+   S +
Sbjct: 42  SSLQQTQTILSLDPTRSSLTTTKPESLSD-----PVFF-NSSSPLSLELHSRDTFVASQH 95

Query: 79  RTPEHLFNLRIQRDVLRVKSLTAFAESAVR-------VPPRNRSRGRANGGFSSSVISGL 131
           +  + L   R++RD  RV  + A    AV         P  N          ++ V+SG 
Sbjct: 96  KDYKSLTLSRLERDSSRVAGIVAKIRFAVEGVDRSDLKPVYNEDTRYQTEDLTTPVVSGA 155

Query: 132 AQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATV 191
           +QGSGEYF+R+GVGTP + +Y+VLDTGSDV WIQC PC  CY Q+DPVF+P  S ++ ++
Sbjct: 156 SQGSGEYFSRIGVGTPAKEMYLVLDTGSDVNWIQCEPCADCYQQSDPVFNPTSSSTYKSL 215

Query: 192 PCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGT-RVARVALGCGHD 250
            C +P C  L++S C R N CLYQVSYGDGS TVG+ +T+T+TF  + ++  VALGCGHD
Sbjct: 216 TCSAPQCSLLETSAC-RSNKCLYQVSYGDGSFTVGELATDTVTFGNSGKINNVALGCGHD 274

Query: 251 NEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTA 310
           NEGLF  AAGLLGLG G LS   Q        FSYCLVDR  S K SS+ F    +    
Sbjct: 275 NEGLFTGAAGLLGLGGGVLSITNQMKA---TSFSYCLVDRD-SGKSSSLDFNSVQLGGGD 330

Query: 311 RFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTR 370
              PLL N K+DTFYYV L G SVGG  V  +  ++F +D +G+GGVI+D GT+VTRL  
Sbjct: 331 ATAPLLRNKKIDTFYYVGLSGFSVGGEKVV-LPDAIFDVDASGSGGVILDCGTAVTRLQT 389

Query: 371 PAYIALRDAFRAGASSLKR-APDFSLFDTCFDLSGKTEVKVPTVVLHFRGAD-VSLPATN 428
            AY +LRDAF     +LK+ +   SLFDTC+D S  + VKVPTV  HF G   + LPA N
Sbjct: 390 QAYNSLRDAFLKLTVNLKKGSSSISLFDTCYDFSSLSTVKVPTVAFHFTGGKSLDLPAKN 449

Query: 429 YLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGC 479
           YLIPVD SGTFCFAFA T S LSIIGN+QQQG R+ YDL+ + IG +   C
Sbjct: 450 YLIPVDDSGTFCFAFAPTSSSLSIIGNVQQQGTRITYDLSKNVIGLSGNKC 500
Aspartic protease involved in drought avoidance through abscisic acid signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: -
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query480
255564685469 Aspartic proteinase nepenthesin-1 precur 0.968 0.991 0.764 0.0
224067990490 predicted protein [Populus trichocarpa] 0.989 0.969 0.747 0.0
224130548488 predicted protein [Populus trichocarpa] 0.991 0.975 0.725 0.0
225470916489 PREDICTED: aspartic proteinase nepenthes 0.952 0.934 0.748 0.0
449443786453 PREDICTED: protein ASPARTIC PROTEASE IN 0.925 0.980 0.727 0.0
297848386485 aspartyl protease family protein [Arabid 0.943 0.934 0.741 0.0
356522504473 PREDICTED: aspartic proteinase nepenthes 0.952 0.966 0.729 0.0
449432044471 PREDICTED: protein ASPARTIC PROTEASE IN 0.962 0.980 0.733 0.0
356573235472 PREDICTED: aspartic proteinase nepenthes 0.910 0.925 0.760 0.0
15223368485 aspartyl protease-like protein [Arabidop 0.860 0.851 0.776 0.0
>gi|255564685|ref|XP_002523337.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] gi|223537425|gb|EEF39053.1| Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/484 (76%), Positives = 408/484 (84%), Gaps = 19/484 (3%)

Query: 1   MEGKA-RNHLLLLFSF--FFTAAASLQYQTFVLNSLPTPSTLSWPESVSVSESESSLPLP 57
           MEGKA RN  LL FSF  FF+ + SL YQT V N L +  TLSW +S S        P  
Sbjct: 1   MEGKAGRNAFLLFFSFTIFFSHSTSLNYQTLVANPLRSQPTLSWTDSES--------PTD 52

Query: 58  APDAESSLSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRG 117
             ++ ++ S++LHHVD+LSFN TPE LF  R+QRD  RV++++  AE+A        +  
Sbjct: 53  TAESSATFSVQLHHVDALSFNSTPETLFTTRLQRDAARVEAISYLAETA-------GTGK 105

Query: 118 RANGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTD 177
           R   GFSSSVISGLAQGSGEYFTR+GVGTPPRYVYMVLDTGSD+VWIQCAPCK+CY+Q+D
Sbjct: 106 RVGTGFSSSVISGLAQGSGEYFTRIGVGTPPRYVYMVLDTGSDIVWIQCAPCKRCYAQSD 165

Query: 178 PVFDPAKSRSFATVPCRSPLCRKLDSSGCN-RRNTCLYQVSYGDGSITVGDFSTETLTFR 236
           PVFDP KSRSFA++ CRSPLC +LDS GCN ++ TC+YQVSYGDGS T GDFSTETLTFR
Sbjct: 166 PVFDPRKSRSFASIACRSPLCHRLDSPGCNTQKQTCMYQVSYGDGSFTFGDFSTETLTFR 225

Query: 237 GTRVARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKP 296
            TRVARVALGCGHDNEGLFV AAGLLGLGRGRLSFP+QTGRRFN KFSYCLVDRS S+KP
Sbjct: 226 RTRVARVALGCGHDNEGLFVGAAGLLGLGRGRLSFPSQTGRRFNHKFSYCLVDRSASSKP 285

Query: 297 SSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGG 356
           SSMVFGDSAVSRTARFTPL++NPKLDTFYYVEL+GISVGG  V GITASLFKLD  GNGG
Sbjct: 286 SSMVFGDSAVSRTARFTPLVSNPKLDTFYYVELLGISVGGTRVPGITASLFKLDQTGNGG 345

Query: 357 VIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLH 416
           VIIDSGTSVTRLTRPAYIA RDAFRAGAS+LKRAP FSLFDTCFDLSGKTEVKVPTVVLH
Sbjct: 346 VIIDSGTSVTRLTRPAYIAFRDAFRAGASNLKRAPQFSLFDTCFDLSGKTEVKVPTVVLH 405

Query: 417 FRGADVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAP 476
           FRGADVSLPA+NYLIPVD+SG FC AFAGTM GLSIIGNIQQQGFRVVYDLA SR+GFAP
Sbjct: 406 FRGADVSLPASNYLIPVDTSGNFCLAFAGTMGGLSIIGNIQQQGFRVVYDLAGSRVGFAP 465

Query: 477 RGCA 480
            GCA
Sbjct: 466 HGCA 469

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224067990|ref|XP_002302634.1| predicted protein [Populus trichocarpa] gi|222844360|gb|EEE81907.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224130548|ref|XP_002320868.1| predicted protein [Populus trichocarpa] gi|222861641|gb|EEE99183.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225470916|ref|XP_002263964.1| PREDICTED: aspartic proteinase nepenthesin-1 [Vitis vinifera] gi|147788999|emb|CAN64659.1| hypothetical protein VITISV_009613 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443786|ref|XP_004139658.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cucumis sativus] gi|449475416|ref|XP_004154449.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297848386|ref|XP_002892074.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] gi|297337916|gb|EFH68333.1| aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356522504|ref|XP_003529886.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|449432044|ref|XP_004133810.1| PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356573235|ref|XP_003554768.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|15223368|ref|NP_171637.1| aspartyl protease-like protein [Arabidopsis thaliana] gi|9665144|gb|AAF97328.1|AC023628_9 Unknown protein [Arabidopsis thaliana] gi|22135930|gb|AAM91547.1| chloroplast nucleoid DNA binding protein, putative [Arabidopsis thaliana] gi|30387595|gb|AAP31963.1| At1g01300 [Arabidopsis thaliana] gi|332189147|gb|AEE27268.1| aspartyl protease-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query480
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.943 0.934 0.704 8e-172
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.931 0.925 0.642 2.3e-151
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.858 0.853 0.5 6.2e-101
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.860 0.878 0.466 8.2e-99
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.862 0.828 0.486 3.2e-97
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.847 0.858 0.357 5.4e-63
TAIR|locus:2183715464 AT5G10760 [Arabidopsis thalian 0.706 0.730 0.392 5.4e-63
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.835 0.869 0.361 2.4e-60
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.712 0.782 0.368 5.1e-58
TAIR|locus:2017799484 AT1G79720 [Arabidopsis thalian 0.704 0.698 0.359 2.6e-54
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1670 (592.9 bits), Expect = 8.0e-172, P = 8.0e-172
 Identities = 325/461 (70%), Positives = 367/461 (79%)

Query:    25 YQTFVLNS--LPTPSTXXXXXXXXXXXXXXXXXXXAPDAESS--LSLRLHHVDSLSFNRT 80
             +QT   NS  LP  S                      D+ESS  ++L L H+D+LS N+T
Sbjct:    28 FQTLFPNSHSLPCASPVSFQPDSDSESLLESEFESGSDSESSSSITLNLDHIDALSSNKT 87

Query:    81 PEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRGRANGGFSSSVISGLAQGSGEYFT 140
             P+ LF+ R+QRD  RVKS+   A  A ++P RN +     GGFSSSV+SGL+QGSGEYFT
Sbjct:    88 PDELFSSRLQRDSRRVKSI---ATLAAQIPGRNVTHAPRPGGFSSSVVSGLSQGSGEYFT 144

Query:   141 RLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRK 200
             RLGVGTP RYVYMVLDTGSD+VW+QCAPC++CYSQ+DP+FDP KS+++AT+PC SP CR+
Sbjct:   145 RLGVGTPARYVYMVLDTGSDIVWLQCAPCRRCYSQSDPIFDPRKSKTYATIPCSSPHCRR 204

Query:   201 LDSSGCN-RRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFVXXX 259
             LDS+GCN RR TCLYQVSYGDGS TVGDFSTETLTFR  RV  VALGCGHDNEGLFV   
Sbjct:   205 LDSAGCNTRRKTCLYQVSYGDGSFTVGDFSTETLTFRRNRVKGVALGCGHDNEGLFVGAA 264

Query:   260 XXXXXXXXXXSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANP 319
                       SFP QTG RFN+KFSYCLVDRS S+KPSS+VFG++AVSR ARFTPLL+NP
Sbjct:   265 GLLGLGKGKLSFPGQTGHRFNQKFSYCLVDRSASSKPSSVVFGNAAVSRIARFTPLLSNP 324

Query:   320 KLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDA 379
             KLDTFYYV L+GISVGG  V G+TASLFKLD  GNGGVIIDSGTSVTRL RPAYIA+RDA
Sbjct:   325 KLDTFYYVGLLGISVGGTRVPGVTASLFKLDQIGNGGVIIDSGTSVTRLIRPAYIAMRDA 384

Query:   380 FRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTF 439
             FR GA +LKRAPDFSLFDTCFDLS   EVKVPTVVLHFRGADVSLPATNYLIPVD++G F
Sbjct:   385 FRVGAKTLKRAPDFSLFDTCFDLSNMNEVKVPTVVLHFRGADVSLPATNYLIPVDTNGKF 444

Query:   440 CFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA 480
             CFAFAGTM GLSIIGNIQQQGFRVVYDLA+SR+GFAP GCA
Sbjct:   445 CFAFAGTMGGLSIIGNIQQQGFRVVYDLASSRVGFAPGGCA 485
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0080167 "response to karrikin" evidence=IEP
GO:0009664 "plant-type cell wall organization" evidence=RCA
GO:0042545 "cell wall modification" evidence=RCA
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017799 AT1G79720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766
3rd Layer3.4.23.120.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.II.830.1
hypothetical protein (463 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-149
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 1e-101
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 1e-84
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 8e-57
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 1e-31
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 9e-29
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 3e-24
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 5e-23
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 2e-14
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 6e-11
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 1e-10
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 1e-10
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 2e-10
cd05473364 cd05473, beta_secretase_like, Beta-secretase, aspa 2e-09
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 3e-09
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 3e-08
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 7e-07
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 3e-06
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 2e-05
cd05487326 cd05487, renin_like, Renin stimulates production o 8e-04
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 0.001
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information 
 Score =  426 bits (1097), Expect = e-149
 Identities = 180/348 (51%), Positives = 212/348 (60%), Gaps = 54/348 (15%)

Query: 137 EYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSP 196
           EY   +G+GTP R   +++DTGSD+ W+QC PC                           
Sbjct: 1   EYVVTVGLGTPARDQTVIVDTGSDLTWVQCQPC--------------------------- 33

Query: 197 LCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVAR-VALGCGHDNEGLF 255
                          CLYQVSYGDGS T GD +T+TLT   + V    A GCGHDNEGLF
Sbjct: 34  ---------------CLYQVSYGDGSYTTGDLATDTLTLGSSDVVPGFAFGCGHDNEGLF 78

Query: 256 VAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFG-DSAVSRTARFTP 314
             AAGLLGLGRG+LS P+QT   +   FSYCL DRS+S+    + FG  ++V   A FTP
Sbjct: 79  GGAAGLLGLGRGKLSLPSQTASSYGGVFSYCLPDRSSSSS-GYLSFGAAASVPAGASFTP 137

Query: 315 LLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYI 374
           +L+NP++ TFYYV L GISVGG  +    AS       G GGVIIDSGT +TRL   AY 
Sbjct: 138 MLSNPRVPTFYYVGLTGISVGGRRLPIPPASF------GAGGVIIDSGTVITRLPPSAYA 191

Query: 375 ALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFR-GADVSLPATNYLIPV 433
           ALRDAFRA  ++  RAP FS+ DTC+DLSG   V VPTV LHF+ GADV L A+  L PV
Sbjct: 192 ALRDAFRAAMAAYPRAPGFSILDTCYDLSGFRSVSVPTVSLHFQGGADVELDASGVLYPV 251

Query: 434 DSSGTFCFAFAGT--MSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGC 479
           D S   C AFAGT    GLSIIGN+QQQ FRVVYD+A  RIGFAP GC
Sbjct: 252 DDSSQVCLAFAGTSDDGGLSIIGNVQQQTFRVVYDVAGGRIGFAPGGC 299

Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco. Antisense tobacco with reduced amount of CND41 maintained green leaves and constant protein levels, especially Rubisco. CND41 has DNA-binding as well as aspartic protease activities. The pepsin-like aspartic protease domain is located at the C-terminus of the protein. The enzyme is characterized by having two aspartic protease catalytic site motifs, the Asp-Thr-Gly-Ser in the N-terminal and Asp-Ser-Gly-Ser in the C-terminal region. Aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. One lobe may be evolved from the other through ancient gene-duplication event. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 299
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133140 cd05473, beta_secretase_like, Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133154 cd05487, renin_like, Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 480
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.96
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.91
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.16
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.05
PF1365090 Asp_protease_2: Aspartyl protease 96.72
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.67
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.62
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 93.32
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.28
COG3577215 Predicted aspartyl protease [General function pred 90.52
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 90.46
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 88.03
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 86.82
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.32
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 84.96
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 83.76
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 83.3
PF1365090 Asp_protease_2: Aspartyl protease 80.43
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.1e-75  Score=608.79  Aligned_cols=392  Identities=37%  Similarity=0.689  Sum_probs=330.5

Q ss_pred             CceEEEEEccCCCCC-----CCCchhHHHHHHHHhHHHHHHHHHHHhccccCCCCCCCCCCCCCCceecccccccCCcee
Q 040810           63 SSLSLRLHHVDSLSF-----NRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRGRANGGFSSSVISGLAQGSGE  137 (480)
Q Consensus        63 ~~~~~~l~h~~~~~~-----~~~~~~~~~~~~~~d~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  137 (480)
                      ..++++|+||+++++     +.++.++++++++||.+|++++.++..                  ...|+.++...++++
T Consensus        23 ~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~------------------~~~~~~~~~~~~~~~   84 (431)
T PLN03146         23 GGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDA------------------SPNDPQSDLISNGGE   84 (431)
T ss_pred             CceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccc------------------cCCccccCcccCCcc
Confidence            458999999998754     335578899999999999998865411                  012444444556899


Q ss_pred             EEEEEEecCCCcEEEEEEECCCCceEEecCCCCCCCCCCCCCCCCCCCCCccccCCCCcccCCCCCC-CCCCCCCceeee
Q 040810          138 YFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSS-GCNRRNTCLYQV  216 (480)
Q Consensus       138 Y~~~i~iGTP~q~~~~ivDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~~~~C~~~~~~-~C~~~~~~~y~~  216 (480)
                      |+++|.||||||++.|++||||+++||+|.+|..|+.|.++.|||++|+||+.++|.++.|+.+... .|..++.|.|.+
T Consensus        85 Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~c~y~i  164 (431)
T PLN03146         85 YLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENTCTYSY  164 (431)
T ss_pred             EEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCCCeeEE
Confidence            9999999999999999999999999999999999999999999999999999999999999987654 477666799999


Q ss_pred             eeCCCceeEEEEEEEEEEECC-----eeeeeEEEEEEecCCCCc-cCCceEeecCCCCCChHHHhhhcCCCcEEEEeccC
Q 040810          217 SYGDGSITVGDFSTETLTFRG-----TRVARVALGCGHDNEGLF-VAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDR  290 (480)
Q Consensus       217 ~Ygdgs~~~G~~~~Dtvt~g~-----~~v~~~~fG~~~~~~~~~-~~~~GIlGLG~~~~Sl~~ql~~~~~~~FS~~L~~~  290 (480)
                      .|+||+.+.|.+++|+|+|++     ..++++.|||++++.+.| ...+||||||++++|+++|+.....++|||||.+.
T Consensus       165 ~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g~f~~~~~GilGLG~~~~Sl~sql~~~~~~~FSycL~~~  244 (431)
T PLN03146        165 SYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGGTFDEKGSGIVGLGGGPLSLISQLGSSIGGKFSYCLVPL  244 (431)
T ss_pred             EeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCCCccCCCceeEecCCCCccHHHHhhHhhCCcEEEECCCC
Confidence            999999888999999999986     468999999999988777 35899999999999999999876667999999864


Q ss_pred             CCC-CCCcEEEeccCC-CC-CCeEEEecccCCCCCeeEEEEEeeEEECCeeecceeccccccCCCCCCcEEEcccCccee
Q 040810          291 STS-AKPSSMVFGDSA-VS-RTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTR  367 (480)
Q Consensus       291 ~~~-~~~g~L~fG~~d-~~-g~~~~tpl~~~~~~~~~y~v~l~gisVgg~~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~  367 (480)
                      .+. ...|.|+||+.. +. +.+.||||+.+. .+.+|+|.|++|+||+++++ ++...|.  ..+.+++||||||++++
T Consensus       245 ~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~-~~~~y~V~L~gIsVgg~~l~-~~~~~~~--~~~~g~~iiDSGTt~t~  320 (431)
T PLN03146        245 SSDSNGTSKINFGTNAIVSGSGVVSTPLVSKD-PDTFYYLTLEAISVGSKKLP-YTGSSKN--GVEEGNIIIDSGTTLTL  320 (431)
T ss_pred             CCCCCCcceEEeCCccccCCCCceEcccccCC-CCCeEEEeEEEEEECCEECc-CCccccc--cCCCCcEEEeCCcccee
Confidence            322 227999999965 33 358999998642 25799999999999999998 8877765  34567899999999999


Q ss_pred             eCHHHHHHHHHHHHhhhccCCcCCCCCccccccccCCCcccccceEEEEEcCeEEEECCCCcEEEecCCCcEEEEEEecC
Q 040810          368 LTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCFAFAGTM  447 (480)
Q Consensus       368 Lp~~~y~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~lt~~F~G~~~~l~~~~yl~~~~~~g~~Cl~~~~~~  447 (480)
                      ||+++|++|+++|.+++...+.......++.||+...  ...+|+|+|||+|+++.|++++|+++... +..|+++.+. 
T Consensus       321 Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~--~~~~P~i~~~F~Ga~~~l~~~~~~~~~~~-~~~Cl~~~~~-  396 (431)
T PLN03146        321 LPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTS--DIKLPIITAHFTGADVKLQPLNTFVKVSE-DLVCFAMIPT-  396 (431)
T ss_pred             cCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCC--CCCCCeEEEEECCCeeecCcceeEEEcCC-CcEEEEEecC-
Confidence            9999999999999988754333333334678998532  25799999999999999999999998763 6789999876 


Q ss_pred             CCceeecHhhhcceEEEEECCCCEEEEeeCCCC
Q 040810          448 SGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA  480 (480)
Q Consensus       448 ~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~C~  480 (480)
                      .+.+|||+.|||++||+||++++|||||+.+|+
T Consensus       397 ~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~  429 (431)
T PLN03146        397 SSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCT  429 (431)
T ss_pred             CCceEECeeeEeeEEEEEECCCCEEeeecCCcC
Confidence            346999999999999999999999999999995

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 3e-09
3vla_A413 Crystal Structure Of Edgp Length = 413 3e-09
1htr_B329 Crystal And Molecular Structures Of Human Progastri 7e-09
2qu2_A415 Bace1 With Compound 1 Length = 415 4e-08
3l58_A414 Structure Of Bace Bound To Sch589432 Length = 414 4e-08
2zhr_A411 Crystal Structure Of Bace1 In Complex With Om99-2 A 4e-08
3ckp_A412 Crystal Structure Of Bace-1 In Complex With Inhibit 4e-08
3dm6_A406 Beta-Secretase 1 Complexed With Statine-Based Inhib 4e-08
1w50_A411 Apo Structure Of Bace (beta Secretase) Length = 411 4e-08
2zjk_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 4e-08
3ixk_A405 Potent Beta-Secretase 1 Inhibitor Length = 405 4e-08
3exo_A413 Crystal Structure Of Bace1 Bound To Inhibitor Lengt 4e-08
2of0_A402 X-Ray Crystal Structure Of Beta Secretase Complexed 4e-08
3hvg_A411 Structure Of Bace (Beta Secretase) In Complex With 4e-08
2zjn_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 4e-08
1ym4_A408 Crystal Structure Of Human Beta Secretase Complexed 4e-08
3vv6_A416 Crystal Structure Of Beta Secetase In Complex With 4e-08
3tpr_A433 Crystal Structure Of Bace1 Complexed With An Inhibi 4e-08
2zji_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 4e-08
1fkn_A391 Structure Of Beta-Secretase Complexed With Inhibito 4e-08
1tqf_A405 Crystal Structure Of Human Beta Secretase Complexed 4e-08
3qi1_A408 Design And Synthesis Of Hydroxyethylamine (Hea) Bac 5e-08
2hiz_A455 Crystal Structure Of Human Beta-Secretase (Bace) In 5e-08
3tpj_A433 Apo Structure Of Bace1 Length = 433 5e-08
2qzl_A411 Crystal Structure Of Human Beta Secretase Complexed 5e-08
2hm1_A406 Crystal Structure Of Human Beta-Secretase (Bace) In 5e-08
3udh_A404 Crystal Structure Of Bace With Compound 1 Length = 5e-08
2va5_A455 X-Ray Crystal Structure Of Beta Secretase Complexed 5e-08
4ewo_A386 Design And Synthesis Of Potent Hydroxyethylamine (H 5e-08
3lpi_A455 Structure Of Bace Bound To Sch745132 Length = 455 5e-08
2vie_A392 Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2- 5e-08
2q15_A385 Structure Of Bace Complexed To Compound 3a Length = 5e-08
4dpf_A391 Bace-1 In Complex With A Hea-Macrocyclic Type Inhib 5e-08
3u6a_A390 Rational Design And Synthesis Of Aminopiperazinones 5e-08
3r1g_B402 Structure Basis Of Allosteric Inhibition Of Bace1 B 5e-08
2fdp_A388 Crystal Structure Of Beta-Secretase Complexed With 5e-08
1ym2_A402 Crystal Structure Of Human Beta Secretase Complexed 5e-08
1sgz_A389 Crystal Structure Of Unbound Beta-Secretase Catalyt 5e-08
3kmx_A395 Structure Of Bace Bound To Sch346572 Length = 395 5e-08
2q11_A388 Structure Of Bace Complexed To Compound 1 Length = 5e-08
4b1d_A388 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 5e-08
2wjo_A412 Human Bace (Beta Secretase) In Complex With Cyclohe 5e-08
3bra_A409 Bace-1 Complexed With Compound 1 Length = 409 6e-08
3cib_A390 Structure Of Bace Bound To Sch727596 Length = 390 6e-08
2qk5_A395 Structure Of Bace1 Bound To Sch626485 Length = 395 6e-08
4b1c_A375 New Aminoimidazoles As Bace-1 Inhibitors: From Rati 7e-08
2zjh_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 1e-07
2zjj_A405 Crystal Structure Of The Human Bace1 Catalytic Doma 2e-07
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 4e-07
4aa9_A320 Camel Chymosin At 1.6a Resolution Length = 320 1e-06
1b5f_A239 Native Cardosin A From Cynara Cardunculus L. Length 1e-05
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 3e-05
2qzw_A341 Secreted Aspartic Proteinase (Sap) 1 From Candida A 3e-05
2ewy_A383 Crystal Structure Of Human Bace2 In Complex With A 4e-05
2rmp_A361 Rmp-Pepstatin A Complex Length = 361 5e-05
5pep_A326 X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim 5e-05
1dp5_A329 The Structure Of Proteinase A Complexed With A Ia3 5e-05
3psg_A370 The High Resolution Crystal Structure Of Porcine Pe 6e-05
1psa_A326 Structure Of A Pepsin(Slash)renin Inhibitor Complex 6e-05
2psg_A370 Refined Structure Of Porcine Pepsinogen At 1.8 Angs 7e-05
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 7e-05
1f34_A326 Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou 8e-05
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 8e-05
2h6s_A340 Secreted Aspartic Proteinase (sap) 3 From Candida A 8e-05
1flh_A326 Crystal Structure Of Human Uropepsin At 2.45 A Reso 9e-05
3pep_A326 Revised 2.3 Angstroms Structure Of Porcine Pepsin. 9e-05
3d91_A341 Human Renin In Complex With Remikiren Length = 341 9e-05
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 9e-05
1pso_E326 The Crystal Structure Of Human Pepsin And Its Compl 9e-05
1hrn_A337 High Resolution Crystal Structures Of Recombinant H 1e-04
2bks_A340 Crystal Structure Of Renin-Pf00074777 Complex Lengt 1e-04
3oad_A166 Design And Optimization Of New Piperidines As Renin 1e-04
4pep_A326 The Molecular And Crystal Structures Of Monoclinic 1e-04
2i4q_A336 Human ReninPF02342674 COMPLEX Length = 336 1e-04
3vcm_A335 Crystal Structure Of Human Prorenin Length = 335 1e-04
2g24_A333 Ketopiperazine-Based Renin Inhibitors: Optimization 1e-04
2jxr_A329 Structure Of Yeast Proteinase A Length = 329 1e-04
2x0b_A383 Crystal Structure Of Human Angiotensinogen Complexe 1e-04
1qdm_A 478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 1e-04
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 2e-04
1eag_A342 Secreted Aspartic Proteinase (Sap2) From Candida Al 2e-04
1mpp_A361 X-Ray Analyses Of Aspartic Proteinases. V. Structur 2e-04
3cms_A323 Engineering Enzyme Sub-Site Specificity: Preparatio 5e-04
1czi_E323 Chymosin Complex With The Inhibitor Cp-113972 Lengt 5e-04
1zap_A342 Secreted Aspartic Protease From C. Albicans Length 8e-04
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/388 (22%), Positives = 154/388 (39%), Gaps = 61/388 (15%)
Query: 137 EYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSF-----ATV 191
           +Y T +   TP     +V+D G   +W+ C       +     + P + R+       ++
Sbjct: 21  QYVTTINQRTPLVSENLVVDLGGRFLWVDCD-----QNYVSSTYRPVRCRTSQCSLSGSI 75
Query: 192 PCRSPLCRKLDSSGCNRRNTC-LYQVSYGDGSITVGDFSTETLTFRGT---------RVA 241
            C    C      GCN  NTC ++  +    + T G+ + + ++   T          V 
Sbjct: 76  ACGD--CFNGPRPGCNN-NTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVP 132
Query: 242 RVALGCGHDN--EGLFVXXXXXXXXXXXXXSFPTQ--TGRRFNRKFSYCLVDRSTSAKPS 297
           R    C   +  + L               + P+Q  +   F RKF+ CL   ++S   S
Sbjct: 133 RFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSN--S 190
Query: 298 SMVFGDSAVS---------RTARFTPLLANP----------KLDTFYYVELVGISVGGAH 338
            ++FG+   +         +T  +TPLL NP          +    Y++ +  I +  + 
Sbjct: 191 VIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKIN-SK 249
Query: 339 VRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAF--RAGASSLKRAPDFSLF 396
           +  +  SL  +  AG GG  I +    T L    Y A+ +AF   + A ++ R    + F
Sbjct: 250 IVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPF 309
Query: 397 DTCFD----LSGKTEVKVPTVVLHFRGADV--SLPATNYLIPVDSSGTFCFAFAGTMSGL 450
             CF     LS +    VP++ L  +   V  ++  +N ++ ++ +   C       S L
Sbjct: 310 GACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDN-VVCLGVVDGGSNL 368
Query: 451 S---IIGNIQQQGFRVVYDLAASRIGFA 475
               +IG  Q +   V +DLA SR+GF+
Sbjct: 369 RTSIVIGGHQLEDNLVQFDLATSRVGFS 396
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure
>pdb|2QU2|A Chain A, Bace1 With Compound 1 Length = 415 Back     alignment and structure
>pdb|3L58|A Chain A, Structure Of Bace Bound To Sch589432 Length = 414 Back     alignment and structure
>pdb|2ZHR|A Chain A, Crystal Structure Of Bace1 In Complex With Om99-2 At Ph 5.0 Length = 411 Back     alignment and structure
>pdb|3CKP|A Chain A, Crystal Structure Of Bace-1 In Complex With Inhibitor Length = 412 Back     alignment and structure
>pdb|3DM6|A Chain A, Beta-Secretase 1 Complexed With Statine-Based Inhibitor Length = 406 Back     alignment and structure
>pdb|1W50|A Chain A, Apo Structure Of Bace (beta Secretase) Length = 411 Back     alignment and structure
>pdb|2ZJK|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid(3-Mercapto-Propyl)-Amide Length = 405 Back     alignment and structure
>pdb|3IXK|A Chain A, Potent Beta-Secretase 1 Inhibitor Length = 405 Back     alignment and structure
>pdb|3EXO|A Chain A, Crystal Structure Of Bace1 Bound To Inhibitor Length = 413 Back     alignment and structure
>pdb|2OF0|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 5 Length = 402 Back     alignment and structure
>pdb|3HVG|A Chain A, Structure Of Bace (Beta Secretase) In Complex With Ev0 Length = 411 Back     alignment and structure
>pdb|2ZJN|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(5-Chloro-2-Isopropoxy-3-Methoxy-Benzyl)- Piperidin-4-Yl]-2-(2-Methyl-4-Sulfamoyl-Phenoxy)- Acetamide Length = 405 Back     alignment and structure
>pdb|1YM4|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Amk640 Length = 408 Back     alignment and structure
>pdb|3VV6|A Chain A, Crystal Structure Of Beta Secetase In Complex With 2-Amino-3-Methyl-6- ((1s, 2r)-2-Phenylcyclopropyl)pyrimidin-4(3h)-One Length = 416 Back     alignment and structure
>pdb|3TPR|A Chain A, Crystal Structure Of Bace1 Complexed With An Inhibitor Length = 433 Back     alignment and structure
>pdb|2ZJI|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-[1-(2, 6-Dimethoxy-Benzyl)-Piperidin-4-Yl]-4-Mercapto- Butyramide Length = 405 Back     alignment and structure
>pdb|1FKN|A Chain A, Structure Of Beta-Secretase Complexed With Inhibitor Length = 391 Back     alignment and structure
>pdb|1TQF|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Inhibitor Length = 405 Back     alignment and structure
>pdb|3QI1|A Chain A, Design And Synthesis Of Hydroxyethylamine (Hea) Bace-1 Inhibitors: Prime Side Chromane-Containing Inhibitors Length = 408 Back     alignment and structure
>pdb|2HIZ|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor Length = 455 Back     alignment and structure
>pdb|3TPJ|A Chain A, Apo Structure Of Bace1 Length = 433 Back     alignment and structure
>pdb|2QZL|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Ixs Length = 411 Back     alignment and structure
>pdb|2HM1|A Chain A, Crystal Structure Of Human Beta-Secretase (Bace) In The Presence Of An Inhibitor (2) Length = 406 Back     alignment and structure
>pdb|3UDH|A Chain A, Crystal Structure Of Bace With Compound 1 Length = 404 Back     alignment and structure
>pdb|2VA5|A Chain A, X-Ray Crystal Structure Of Beta Secretase Complexed With Compound 8c Length = 455 Back     alignment and structure
>pdb|4EWO|A Chain A, Design And Synthesis Of Potent Hydroxyethylamine (Hea) Bace-1 Inhibitors Length = 386 Back     alignment and structure
>pdb|3LPI|A Chain A, Structure Of Bace Bound To Sch745132 Length = 455 Back     alignment and structure
>pdb|2VIE|A Chain A, Human Bace-1 In Complex With N-((1s,2r)-1-Benzyl-2-Hydroxy- 3-((1,1, 5-Trimethylhexyl)amino)propyl)-3-(Ethylamino)-5-(2- Oxopyrrolidin-1-Yl)benzamide Length = 392 Back     alignment and structure
>pdb|2Q15|A Chain A, Structure Of Bace Complexed To Compound 3a Length = 385 Back     alignment and structure
>pdb|4DPF|A Chain A, Bace-1 In Complex With A Hea-Macrocyclic Type Inhibitor Length = 391 Back     alignment and structure
>pdb|3U6A|A Chain A, Rational Design And Synthesis Of Aminopiperazinones As Beta Secretase (Bace) Inhibitors Length = 390 Back     alignment and structure
>pdb|3R1G|B Chain B, Structure Basis Of Allosteric Inhibition Of Bace1 By An Exosite- Binding Antibody Length = 402 Back     alignment and structure
>pdb|2FDP|A Chain A, Crystal Structure Of Beta-Secretase Complexed With An Amino- Ethylene Inhibitor Length = 388 Back     alignment and structure
>pdb|1YM2|A Chain A, Crystal Structure Of Human Beta Secretase Complexed With Nvp-Aur200 Length = 402 Back     alignment and structure
>pdb|1SGZ|A Chain A, Crystal Structure Of Unbound Beta-Secretase Catalytic Domain. Length = 389 Back     alignment and structure
>pdb|3KMX|A Chain A, Structure Of Bace Bound To Sch346572 Length = 395 Back     alignment and structure
>pdb|2Q11|A Chain A, Structure Of Bace Complexed To Compound 1 Length = 388 Back     alignment and structure
>pdb|4B1D|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 388 Back     alignment and structure
>pdb|2WJO|A Chain A, Human Bace (Beta Secretase) In Complex With Cyclohexanecarboxylic Acid (2-(2-Am Ino-6-Phenoxy-4h- Quinazolin-3-Yl)-2-Cyclohexyl-Ethyl)-Amide Length = 412 Back     alignment and structure
>pdb|3BRA|A Chain A, Bace-1 Complexed With Compound 1 Length = 409 Back     alignment and structure
>pdb|3CIB|A Chain A, Structure Of Bace Bound To Sch727596 Length = 390 Back     alignment and structure
>pdb|2QK5|A Chain A, Structure Of Bace1 Bound To Sch626485 Length = 395 Back     alignment and structure
>pdb|4B1C|A Chain A, New Aminoimidazoles As Bace-1 Inhibitors: From Rational Design To Ab-Lowering In Brain Length = 375 Back     alignment and structure
>pdb|2ZJH|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With N-(1-Benzyl-Piperidin-4-Yl)-4-Mercapto-Butyramide Length = 405 Back     alignment and structure
>pdb|2ZJJ|A Chain A, Crystal Structure Of The Human Bace1 Catalytic Domain In Complex With 4-(4-Fluoro-Benzyl)-Piperazine-2-Carboxylic Acid (2-Mercapto-Ethyl)- Amide Length = 405 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|4AA9|A Chain A, Camel Chymosin At 1.6a Resolution Length = 320 Back     alignment and structure
>pdb|1B5F|A Chain A, Native Cardosin A From Cynara Cardunculus L. Length = 239 Back     alignment and structure
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure
>pdb|2QZW|A Chain A, Secreted Aspartic Proteinase (Sap) 1 From Candida Albicans Length = 341 Back     alignment and structure
>pdb|2EWY|A Chain A, Crystal Structure Of Human Bace2 In Complex With A Hydroxyethylenamine Transition-State Inhibitor Length = 383 Back     alignment and structure
>pdb|2RMP|A Chain A, Rmp-Pepstatin A Complex Length = 361 Back     alignment and structure
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1DP5|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant Inhibitor Length = 329 Back     alignment and structure
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 Back     alignment and structure
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 Back     alignment and structure
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans Length = 340 Back     alignment and structure
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution Length = 326 Back     alignment and structure
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 Back     alignment and structure
>pdb|3D91|A Chain A, Human Renin In Complex With Remikiren Length = 341 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 Back     alignment and structure
>pdb|1HRN|A Chain A, High Resolution Crystal Structures Of Recombinant Human Renin In Complex With Polyhydroxymonoamide Inhibitors Length = 337 Back     alignment and structure
>pdb|2BKS|A Chain A, Crystal Structure Of Renin-Pf00074777 Complex Length = 340 Back     alignment and structure
>pdb|3OAD|A Chain A, Design And Optimization Of New Piperidines As Renin Inhibitors Length = 166 Back     alignment and structure
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|2I4Q|A Chain A, Human ReninPF02342674 COMPLEX Length = 336 Back     alignment and structure
>pdb|3VCM|A Chain A, Crystal Structure Of Human Prorenin Length = 335 Back     alignment and structure
>pdb|2G24|A Chain A, Ketopiperazine-Based Renin Inhibitors: Optimization Of The "c" Ring Length = 333 Back     alignment and structure
>pdb|2JXR|A Chain A, Structure Of Yeast Proteinase A Length = 329 Back     alignment and structure
>pdb|2X0B|A Chain A, Crystal Structure Of Human Angiotensinogen Complexed With Renin Length = 383 Back     alignment and structure
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1EAG|A Chain A, Secreted Aspartic Proteinase (Sap2) From Candida Albicans Complexed With A70450 Length = 342 Back     alignment and structure
>pdb|1MPP|A Chain A, X-Ray Analyses Of Aspartic Proteinases. V. Structure And Refinement At 2.0 Angstroms Resolution Of The Aspartic Proteinase From Mucor Pusillus Length = 361 Back     alignment and structure
>pdb|3CMS|A Chain A, Engineering Enzyme Sub-Site Specificity: Preparation, Kinetic Characterization And X-Ray Analysis At 2.0-Angstroms Resolution Of Val111phe Site-Mutated Calf Chymosin Length = 323 Back     alignment and structure
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 Back     alignment and structure
>pdb|1ZAP|A Chain A, Secreted Aspartic Protease From C. Albicans Length = 342 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-107
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 7e-95
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-91
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 4e-29
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 5e-28
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 1e-27
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 6e-27
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 1e-26
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 2e-26
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 5e-26
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 4e-25
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 5e-25
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 7e-24
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-23
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 4e-23
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 1e-22
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-22
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 3e-22
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 4e-22
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-21
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 3e-21
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 3e-21
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 4e-21
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-20
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 1e-20
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 2e-20
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 2e-20
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 3e-20
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 2e-19
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-18
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 3e-16
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 4e-16
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-04
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 1e-09
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-06
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 3e-05
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 3e-05
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  323 bits (829), Expect = e-107
 Identities = 74/395 (18%), Positives = 130/395 (32%), Gaps = 39/395 (9%)

Query: 115 SRGRANGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYS 174
           +  +        V +  +  +G ++  L   TP   V +++D   + +W+ C       +
Sbjct: 2   TPTKPINLVVLPVQNDGS--TGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKT 59

Query: 175 QTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLT 234
              P     +     T  C S         GC++    L   +       +G+   + L 
Sbjct: 60  YQAPFCHSTQCSRANTHQCLSCPA--ASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLA 117

Query: 235 FRGT-----------RVARVALGCGHD---NEGLFVAAAGLLGLGRGRLSFPTQTGRRFN 280
              T            V +    C       +GL     G+ GLG   +S P Q    F 
Sbjct: 118 IHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFG 177

Query: 281 --RKFSYCLVDRSTSAKPSSMVFGDSA----------VSRTARFTPLLANPKLDTFYYVE 328
             R+F+ CL    TS    +++FGD+           +     FTPL         Y V 
Sbjct: 178 LQRQFTTCLSRYPTS--KGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITL--QGEYNVR 233

Query: 329 LVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLK 388
           +  I +    V  +      +  + +GG +I + T    L +  Y A    F        
Sbjct: 234 VNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQA 293

Query: 389 RAPDFSLFDTCFDLSGKTEVKVPTVVLHFR-GADVSLPATNYLIPVDSSGTFCFAFAGTM 447
           +    + F  CF+ +         +V+    G    +   + ++     G  C       
Sbjct: 294 QVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ-PGVTCLGVMNGG 352

Query: 448 S---GLSIIGNIQQQGFRVVYDLAASRIGFAPRGC 479
                   +G  Q +   VV+DLA SR+GF+    
Sbjct: 353 MQPRAEITLGARQLEENLVVFDLARSRVGFSTSSL 387
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 87 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query480
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.87
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.69
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 92.59
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.57
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 92.24
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 85.94
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 83.98
2hs1_A99 HIV-1 protease; ultra-high resolution active site 83.9
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=7.6e-65  Score=526.98  Aligned_cols=338  Identities=26%  Similarity=0.479  Sum_probs=289.5

Q ss_pred             CCCceecccccccCCceeEEEEEEecCCCcEEEEEEECCCCceEEecCCCCCCCCCCCCCCCCCCCCCccccCCCCcccC
Q 040810          120 NGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCR  199 (480)
Q Consensus       120 ~~~~~~p~~~~~~~~~~~Y~~~i~iGTP~q~~~~ivDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~~~~C~  199 (480)
                      ...+..||..+.  .+++|+++|.||||||++.|+|||||+++||+|.+|             .+|+||+.++|.++.|.
T Consensus         6 ~~~~~~pv~~d~--~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~   70 (413)
T 3vla_A            6 PSALVVPVKKDA--STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCS   70 (413)
T ss_dssp             CSEEEEEEEECT--TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHH
T ss_pred             CccEEEEeeecC--CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCccccc
Confidence            456889998875  479999999999999999999999999999999876             37999999999999998


Q ss_pred             CCCCCC-----------CCCCCCceeeeee-CCCceeEEEEEEEEEEEC---------CeeeeeEEEEEEecC--CCCcc
Q 040810          200 KLDSSG-----------CNRRNTCLYQVSY-GDGSITVGDFSTETLTFR---------GTRVARVALGCGHDN--EGLFV  256 (480)
Q Consensus       200 ~~~~~~-----------C~~~~~~~y~~~Y-gdgs~~~G~~~~Dtvt~g---------~~~v~~~~fG~~~~~--~~~~~  256 (480)
                      ......           |. ++.|.|.+.| +||+.+.|.+++|+|+|+         +..++++.|||++.+  .+.+.
T Consensus        71 ~~~~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~  149 (413)
T 3vla_A           71 LSGSIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLAS  149 (413)
T ss_dssp             HTTCCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCT
T ss_pred             ccccCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccc
Confidence            765433           33 3469999999 488888899999999996         268899999999985  45557


Q ss_pred             CCceEeecCCCCCChHHHhhhc--CCCcEEEEeccCCCCCCCcEEEeccCCC--------CCC-eEEEecccCCCC----
Q 040810          257 AAAGLLGLGRGRLSFPTQTGRR--FNRKFSYCLVDRSTSAKPSSMVFGDSAV--------SRT-ARFTPLLANPKL----  321 (480)
Q Consensus       257 ~~~GIlGLG~~~~Sl~~ql~~~--~~~~FS~~L~~~~~~~~~g~L~fG~~d~--------~g~-~~~tpl~~~~~~----  321 (480)
                      .++||||||++++|+++||..+  ..++|||||.+....  .|.|+||+.+.        .++ +.|+||+.++..    
T Consensus       150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~--~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~  227 (413)
T 3vla_A          150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSS--NSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSAT  227 (413)
T ss_dssp             TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSS--CEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSS
T ss_pred             ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCC--ceEEEECCCcccccccccccCCceeEeecccCCcccccc
Confidence            7899999999999999999876  469999999985322  79999999872        467 999999987532    


Q ss_pred             ------CeeEEEEEeeEEECCeeecceeccccccCCCCCCcEEEcccCcceeeCHHHHHHHHHHHHhhhc--cCCcCCCC
Q 040810          322 ------DTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGAS--SLKRAPDF  393 (480)
Q Consensus       322 ------~~~y~v~l~gisVgg~~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~Lp~~~y~~l~~~l~~~~~--~~~~~~~~  393 (480)
                            ..||+|+|++|+||++.+. +++..|..+.++++++||||||++++||+++|++|+++|.+++.  +++..++.
T Consensus       228 ~~~~~~~~~y~V~l~~IsVgg~~l~-~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~  306 (413)
T 3vla_A          228 STQGEPSVEYFIGVKSIKINSKIVA-LNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASV  306 (413)
T ss_dssp             CCTTCCCCSCEECCCEEEETTEEEC-CCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCC
T ss_pred             ccccCCCceEEEEEEEEEECCEEcc-CCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCC
Confidence                  2799999999999999998 99999988777788999999999999999999999999998764  34444444


Q ss_pred             CccccccccCCCcc----cccceEEEEEcC--eEEEECCCCcEEEecCCCcEEEEEEecC---CCceeecHhhhcceEEE
Q 040810          394 SLFDTCFDLSGKTE----VKVPTVVLHFRG--ADVSLPATNYLIPVDSSGTFCFAFAGTM---SGLSIIGNIQQQGFRVV  464 (480)
Q Consensus       394 ~~~~~Cy~~~~~~~----~~~P~lt~~F~G--~~~~l~~~~yl~~~~~~g~~Cl~~~~~~---~~~~IlG~~fl~~~yvv  464 (480)
                      ..++.||++++...    ..+|+|+|+|+|  ++++|++++|+++.+. +..|++|...+   .+.||||++|||++|+|
T Consensus       307 ~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~-~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vv  385 (413)
T 3vla_A          307 APFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-NVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQ  385 (413)
T ss_dssp             TTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET-TEEEECEEEEESSCSSSEEECHHHHTTEEEE
T ss_pred             CCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC-CcEEEEEEecCCCcccceeEehhhhcCeEEE
Confidence            45778999876542    579999999997  8999999999998763 78999988763   25799999999999999


Q ss_pred             EECCCCEEEEeeC
Q 040810          465 YDLAASRIGFAPR  477 (480)
Q Consensus       465 fD~~~~rIGFa~~  477 (480)
                      ||++++|||||++
T Consensus       386 fD~~~~riGfa~~  398 (413)
T 3vla_A          386 FDLATSRVGFSGT  398 (413)
T ss_dssp             EETTTTEEEEEEE
T ss_pred             EECCCCEEEEEEe
Confidence            9999999999985
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 480
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 3e-61
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 1e-48
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 2e-48
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 7e-47
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 2e-46
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 1e-45
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 6e-45
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 1e-44
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 2e-44
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 4e-44
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 2e-43
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 2e-43
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-42
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 1e-42
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 5e-42
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-41
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 3e-41
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-40
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 9e-40
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 3e-39
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 6e-39
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 1e-33
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  202 bits (515), Expect = 3e-61
 Identities = 71/375 (18%), Positives = 115/375 (30%), Gaps = 51/375 (13%)

Query: 135 SGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCR 194
           +  Y      G       +VLD    +VW  C   +              + ++    C 
Sbjct: 13  TSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCP 67

Query: 195 SPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTR--------VARVALG 246
           +P C     S  + +    Y  +   G+   G  S        T            V   
Sbjct: 68  APSC----GSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAA 123

Query: 247 CGHDNE--GLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGD- 303
           C        L   + G+ GL    L+ P Q          + L   +     +    G  
Sbjct: 124 CAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPV 183

Query: 304 --SAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDS 361
                +++  +TPL+        +Y+    I VG   V     +         GGV++ +
Sbjct: 184 PWPQFTQSMPYTPLVTKGG-SPAHYISARSIVVGDTRVPVPEGA------LATGGVMLST 236

Query: 362 GTSVTRLTRPAYIALRDAFRA--------GASSLKRAPDFSLFDTCFDLSG----KTEVK 409
                 L    Y  L DAF          GA   +     + F  C+D            
Sbjct: 237 RLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYA 296

Query: 410 VPTVVLHFR-GADVSLPATNYLIPVDSSGTFCFAFAGTMSG--------LSIIGNIQQQG 460
           VP V L    G+D ++   N ++ V   GT C AF                I+G  Q + 
Sbjct: 297 VPNVQLGLDGGSDWTMTGKNSMVDVK-QGTACVAFVEMKGVAAGDGRAPAVILGGAQMED 355

Query: 461 FRVVYDLAASRIGFA 475
           F + +D+   R+GF+
Sbjct: 356 FVLDFDMEKKRLGFS 370
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query480
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.4e-56  Score=454.98  Aligned_cols=347  Identities=22%  Similarity=0.388  Sum_probs=274.1

Q ss_pred             eEEEEEccCCCCCCCCchhHHHHHHHHhHHHHHHHHHHHhccccCCCCCCCC-CCCCCCceecccccccCCceeEEEEEE
Q 040810           65 LSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSR-GRANGGFSSSVISGLAQGSGEYFTRLG  143 (480)
Q Consensus        65 ~~~~l~h~~~~~~~~~~~~~~~~~~~~d~~R~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~Y~~~i~  143 (480)
                      +++||+++.+          +++.+.++..+.+.++.+ ...    ...... .........|+.+..   +.+|+++|.
T Consensus         2 v~ipl~k~~~----------~r~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~n~~---d~~Y~~~i~   63 (370)
T d3psga_           2 VKVPLVRKKS----------LRQNLIKDGKLKDFLKTH-KHN----PASKYFPEAAALIGDEPLENYL---DTEYFGTIG   63 (370)
T ss_dssp             EEEEEEECCC----------HHHHHHHTTCHHHHHHHC-CCC----GGGGTCTTSCCSSCCCTTGGGT---TCCEEEEEE
T ss_pred             EEEecccCcc----------HHHHHHHcCcHHHHHHhc-ccc----hhhhhcccccCccccccccccc---CCEEEEEEE
Confidence            6899998764          355566666555555544 110    000000 011223345776543   689999999


Q ss_pred             ecCCCcEEEEEEECCCCceEEecCCCCCCCCCCCCCCCCCCCCCccccCCCCcccCCCCCCCCCCCCCceeeeeeCCCce
Q 040810          144 VGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSI  223 (480)
Q Consensus       144 iGTP~q~~~~ivDTGS~~~Wv~~~~C~~C~~~~~~~fdps~SsT~~~~~C~~~~C~~~~~~~C~~~~~~~y~~~Ygdgs~  223 (480)
                      ||||||++.|++||||+++||+|++|..|.++.++.|||++|+||+..                   .|.|.+.|++|+.
T Consensus        64 iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~-------------------~~~~~~~Yg~Gs~  124 (370)
T d3psga_          64 IGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEAT-------------------SQELSITYGTGSM  124 (370)
T ss_dssp             ETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEE-------------------EEEEEEESSSCEE
T ss_pred             EcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccC-------------------CCcEEEEeCCceE
Confidence            999999999999999999999999999999999999999999999987                   5899999999987


Q ss_pred             eEEEEEEEEEEECCeeeeeEEEEEEecCCCCc---cCCceEeecCCCCCC------hHHHhhhc---CCCcEEEEeccCC
Q 040810          224 TVGDFSTETLTFRGTRVARVALGCGHDNEGLF---VAAAGLLGLGRGRLS------FPTQTGRR---FNRKFSYCLVDRS  291 (480)
Q Consensus       224 ~~G~~~~Dtvt~g~~~v~~~~fG~~~~~~~~~---~~~~GIlGLG~~~~S------l~~ql~~~---~~~~FS~~L~~~~  291 (480)
                      . |.+++|++.+++..++++.|||++...+.+   ...+||+|||++..+      +..++..+   ..+.||+|+.+..
T Consensus       125 ~-G~~~~d~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~l~~~~~i~~~~fs~~l~~~~  203 (370)
T d3psga_         125 T-GILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND  203 (370)
T ss_dssp             E-EEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC---
T ss_pred             E-EEEEEEEEeeeceeeeeeEEEEEeeccCceecccccccccccccCcccccCCCchhhhhhhhcccccceeEEEeecCC
Confidence            6 999999999999999999999999877654   467999999987653      55666654   5789999998765


Q ss_pred             CCCCCcEEEeccCC---CCCCeEEEecccCCCCCeeEEEEEeeEEECCeeecceeccccccCCCCCCcEEEcccCcceee
Q 040810          292 TSAKPSSMVFGDSA---VSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRL  368 (480)
Q Consensus       292 ~~~~~g~L~fG~~d---~~g~~~~tpl~~~~~~~~~y~v~l~gisVgg~~~~~i~~~~~~~~~~~~~~~iiDSGTt~t~L  368 (480)
                      ..  .|.|+||++|   +.+++.|+|+..    ..+|.|.+++|.|+++.+. .         .++..+||||||++++|
T Consensus       204 ~~--~g~l~~Gg~d~~~~~~~l~~~p~~~----~~~w~v~~~~i~v~g~~~~-~---------~~~~~aiiDSGTs~~~l  267 (370)
T d3psga_         204 DS--GSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDGETIA-C---------SGGCQAIVDTGTSLLTG  267 (370)
T ss_dssp             ----CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSSSEEE-C---------TTCEEEEECTTCCSEEE
T ss_pred             CC--CceEecCCcCchhcccceeEEeecc----cceEEEEEeeEEeCCeEEe-c---------CCCccEEEecCCceEeC
Confidence            44  7999999999   678999999876    5699999999999998775 3         23457999999999999


Q ss_pred             CHHHHHHHHHHHHhhhccCCcCCCCCccccccccCCCcccccceEEEEEcCeEEEECCCCcEEEecCCCcEEE-EEEec-
Q 040810          369 TRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGADVSLPATNYLIPVDSSGTFCF-AFAGT-  446 (480)
Q Consensus       369 p~~~y~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~lt~~F~G~~~~l~~~~yl~~~~~~g~~Cl-~~~~~-  446 (480)
                      |+++|++|++++.+...    ..+      +|.++|.....+|+|+|+|+|+++.|++++|+++.+   ..|+ +|... 
T Consensus       268 p~~~~~~i~~~l~~~~~----~~~------~~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~~~~---~~c~~~~~~~~  334 (370)
T d3psga_         268 PTSAIANIQSDIGASEN----SDG------EMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQDD---DSCTSGFEGMD  334 (370)
T ss_dssp             EHHHHHHHHHHTTCEEC----TTC------CEECCGGGGGGCCCEEEEETTEEEEECHHHHEEECS---SCEEESEEEEC
T ss_pred             CHHHHHHHHHHhCCeee----cCC------cEEEeccccCCCceEEEEECCEEEEEChHHeEEEcC---CeEEEEEEEcc
Confidence            99999999999865421    122      233445555689999999999999999999999754   3464 55532 


Q ss_pred             ----CCCceeecHhhhcceEEEEECCCCEEEEeeCC
Q 040810          447 ----MSGLSIIGNIQQQGFRVVYDLAASRIGFAPRG  478 (480)
Q Consensus       447 ----~~~~~IlG~~fl~~~yvvfD~~~~rIGFa~~~  478 (480)
                          .++.||||++|||++|+|||++++||||||+.
T Consensus       335 ~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         335 VPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             CCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             cCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence                34579999999999999999999999999973
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure