Citrus Sinensis ID: 040843

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MGAGGPSLQREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEPDENSPTKGLFWYRNKL
ccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHccccEEEcccccccccEEEEEEccc
ccccccccccccccccccccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHcccccccccccHccHHHHHHHHHHHcccccEEEccccccccccccccccccccccHHHHHHHHHHccccccHEEEEEEcHHcccHHEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHcHHHHHHccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccEEEcccccccccEEEEEEccc
mgaggpslqrekkesliqpaphtkppftlsqikkaipphcfkrsllRSFSYVVYDLSFSFLFYYTAtnyfhllpspfaylawpiYWIFQGCVLTGVWVIAhecghhafsdyqwvDDTVGLILHSALLVpyfswkyshrrhhsntaslerdevfvpktksevpfyskyfnnppgrALTLLVTLTLGWPLYLALNvsgrpydrfachfdpkspiysdrerLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQhthpalphynssewDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPIlgeyyqfdgmpfYKAAWREAKEclyvepdensptkglfwyrnkl
mgaggpslqrekkesliqpaphtkppftlsqikKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSntaslerdevfvpKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLyvepdensptkglfwyrnkl
MGAGGPSLQREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEPDENSPTKGLFWYRNKL
*****************************SQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHH********DEVFVPKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEP*****TKGLFWY****
*************************PFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEPDENSPTKGLFWYRNKL
**************SLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEPDENSPTKGLFWYRNKL
********************PHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEPDENSPTKGLFWYRNKL
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGAGGPSLQREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEPDENSPTKGLFWYRNKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query379 2.2.26 [Sep-21-2011]
P48631383 Omega-6 fatty acid desatu yes no 1.0 0.989 0.775 0.0
P48630387 Omega-6 fatty acid desatu no no 0.994 0.974 0.754 1e-173
P46313383 Omega-6 fatty acid desatu yes no 1.0 0.989 0.723 1e-169
Q39287384 Omega-6 fatty acid desatu N/A no 0.997 0.984 0.722 1e-166
O81931375 Delta(12) fatty acid dehy N/A no 0.986 0.997 0.570 1e-134
Q9Y8H5400 Delta(12) fatty acid desa N/A no 0.891 0.845 0.461 9e-85
P59668400 Delta(12) fatty acid desa N/A no 0.891 0.845 0.459 1e-84
P48626379 Omega-3 fatty acid desatu N/A no 0.849 0.849 0.383 1e-55
P48623386 Omega-3 fatty acid desatu no no 0.836 0.821 0.376 1e-53
P48618404 Omega-3 fatty acid desatu N/A no 0.846 0.794 0.360 2e-53
>sp|P48631|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1 Back     alignment and function desciption
 Score =  633 bits (1633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 297/383 (77%), Positives = 332/383 (86%), Gaps = 4/383 (1%)

Query: 1   MGAGG----PSLQREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDL 56
           MGAGG    P   R+ +   ++  P  KP F+LSQIKKAIPPHCF+RS+LRSFSYVVYDL
Sbjct: 1   MGAGGRTDVPPANRKSEVDPLKRVPFEKPQFSLSQIKKAIPPHCFQRSVLRSFSYVVYDL 60

Query: 57  SFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDD 116
           + +F  YY AT+YFHLLP P ++    IYW  QGC+LTGVWVIAHECGHHAFSDYQ +DD
Sbjct: 61  TIAFCLYYVATHYFHLLPGPLSFRGMAIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDD 120

Query: 117 TVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRAL 176
            VGLILHSALLVPYFSWKYSHRRHHSNT SLERDEVFVPK KS + +YSKY NNPPGR L
Sbjct: 121 IVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVL 180

Query: 177 TLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLY 236
           TL VTLTLGWPLYLALNVSGRPYDRFACH+DP  PIYSDRERLQIYISDAG+ A  Y L+
Sbjct: 181 TLAVTLTLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLF 240

Query: 237 RVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRD 296
           R+AMAKGLAW++CVYGVPLL+VNGFLVLIT+LQHTHPALPHY SSEWDWLRGAL+TVDRD
Sbjct: 241 RLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYTSSEWDWLRGALATVDRD 300

Query: 297 YGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAK 356
           YG+LNKVFHNITDTHVAHHLFSTMPHYHAMEAT A+KPILGEYY+FD  PF KA WREA+
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETPFVKAMWREAR 360

Query: 357 ECLYVEPDENSPTKGLFWYRNKL 379
           EC+YVEPD+++ +KG+FWY NKL
Sbjct: 361 ECIYVEPDQSTESKGVFWYNNKL 383
ER (microsomal) omega-6 fatty acid desaturase introduces the second double bond in the biosynthesis of 18:3 fatty acids, important constituents of plant membranes. It is thought to use cytochrome b5 as an electron donor and to act on fatty acids esterified to phosphatidylcholine and, possibly, other phospholipids.
Glycine max (taxid: 3847)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 9EC: .EC: -
>sp|P48630|FD6E1_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1 Back     alignment and function description
>sp|P46313|FAD6E_ARATH Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1 Back     alignment and function description
>sp|Q39287|FAD6E_BRAJU Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1 Back     alignment and function description
>sp|O81931|FAD12_CREAL Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2 Back     alignment and function description
>sp|Q9Y8H5|FAD12_MORAP Delta(12) fatty acid desaturase OS=Mortierella alpina PE=1 SV=2 Back     alignment and function description
>sp|P59668|FAD12_MORIS Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1 Back     alignment and function description
>sp|P48626|FAD3E_TOBAC Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Nicotiana tabacum GN=FAD3 PE=2 SV=1 Back     alignment and function description
>sp|P48623|FAD3E_ARATH Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1 Back     alignment and function description
>sp|P48618|FAD3C_BRANA Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
340749466383 omega-6 fatty acid desaturase [Citrus me 1.0 0.989 0.973 0.0
167018103382 delta-12 fatty acid desaturase [Davidia 0.997 0.989 0.809 0.0
8886726383 omega-6 fatty acid desaturase [Sesamum i 1.0 0.989 0.806 0.0
58013373381 microsomal delta-12 oleate desaturase [O 0.994 0.989 0.796 0.0
225435614376 PREDICTED: omega-6 fatty acid desaturase 0.992 1.0 0.807 0.0
363980959387 fatty acid desaturase 2 [Jatropha curcas 0.997 0.976 0.784 0.0
28371827387 delta-12 oleate desaturase [Punica grana 1.0 0.979 0.775 0.0
325658412381 microsomal delta-12 oleate desaturase [O 0.994 0.989 0.785 0.0
356572094383 PREDICTED: omega-6 fatty acid desaturase 1.0 0.989 0.780 0.0
255645582383 unknown [Glycine max] 1.0 0.989 0.778 1e-180
>gi|340749466|gb|AEK67593.1| omega-6 fatty acid desaturase [Citrus medica var. sarcodactylis] Back     alignment and taxonomy information
 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/383 (97%), Positives = 375/383 (97%), Gaps = 4/383 (1%)

Query: 1   MGAGG----PSLQREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDL 56
           MGAGG    P LQREKKESLIQPAPHTKPPF LSQIKKAIPPHCFKRSL+RSFSYVVYDL
Sbjct: 1   MGAGGRMSVPPLQREKKESLIQPAPHTKPPFNLSQIKKAIPPHCFKRSLIRSFSYVVYDL 60

Query: 57  SFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDD 116
           SFSFLFYY ATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDD
Sbjct: 61  SFSFLFYYIATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDD 120

Query: 117 TVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRAL 176
           TVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPK KSEVPFYSKYFNNPPGRAL
Sbjct: 121 TVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKAKSEVPFYSKYFNNPPGRAL 180

Query: 177 TLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLY 236
           TLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLY
Sbjct: 181 TLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLY 240

Query: 237 RVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRD 296
           RVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRD
Sbjct: 241 RVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRD 300

Query: 297 YGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAK 356
           YGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAK
Sbjct: 301 YGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAK 360

Query: 357 ECLYVEPDENSPTKGLFWYRNKL 379
           ECLYVEPDENSPTKG+FWYRNKL
Sbjct: 361 ECLYVEPDENSPTKGIFWYRNKL 383

Source: Citrus medica var. sarcodactylis

Species: Citrus medica

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|167018103|gb|ABZ05022.1| delta-12 fatty acid desaturase [Davidia involucrata] Back     alignment and taxonomy information
>gi|8886726|gb|AAF80560.1|AF192486_1 omega-6 fatty acid desaturase [Sesamum indicum] gi|59896214|gb|AAX11454.1| microsomal oleic acid desaturase [Sesamum indicum] Back     alignment and taxonomy information
>gi|58013373|gb|AAW63040.1| microsomal delta-12 oleate desaturase [Olea europaea] Back     alignment and taxonomy information
>gi|225435614|ref|XP_002285640.1| PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 [Vitis vinifera] gi|147858117|emb|CAN79670.1| hypothetical protein VITISV_018075 [Vitis vinifera] gi|336478153|gb|AEI60129.1| microsomal delta-12 oleate desaturase [Vitis labrusca] Back     alignment and taxonomy information
>gi|363980959|gb|AEW43691.1| fatty acid desaturase 2 [Jatropha curcas] Back     alignment and taxonomy information
>gi|28371827|gb|AAO37754.1| delta-12 oleate desaturase [Punica granatum] Back     alignment and taxonomy information
>gi|325658412|gb|ADZ39687.1| microsomal delta-12 oleate desaturase [Olea europaea subsp. europaea] Back     alignment and taxonomy information
>gi|356572094|ref|XP_003554205.1| PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like [Glycine max] Back     alignment and taxonomy information
>gi|255645582|gb|ACU23285.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
UNIPROTKB|Q41131387 Q41131 "Oleate 12-hydroxylase" 0.997 0.976 0.738 5.4e-166
TAIR|locus:2099297383 FAD2 "fatty acid desaturase 2" 1.0 0.989 0.723 4e-161
ASPGD|ASPL0000055218471 odeA [Emericella nidulans (tax 0.546 0.439 0.378 4.1e-77
CGD|CAL0003001436 FAD2 [Candida albicans (taxid: 0.918 0.798 0.434 1.7e-75
UNIPROTKB|Q59WT3436 FAD2 "Likely delta-12 fatty ac 0.918 0.798 0.434 1.7e-75
ASPGD|ASPL0000066189394 an2 [Emericella nidulans (taxi 0.432 0.416 0.473 3.7e-74
CGD|CAL0006277433 FAD3 [Candida albicans (taxid: 0.928 0.812 0.383 2.1e-70
UNIPROTKB|Q5AL44433 FAD3 "Likely delta-12 fatty ac 0.928 0.812 0.383 2.1e-70
UNIPROTKB|Q9Y8H5400 Q9Y8H5 "Delta(12) fatty acid d 0.722 0.685 0.441 4.8e-62
TAIR|locus:2005508386 FAD3 "fatty acid desaturase 3" 0.839 0.823 0.391 1.7e-57
UNIPROTKB|Q41131 Q41131 "Oleate 12-hydroxylase" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
 Score = 1615 (573.6 bits), Expect = 5.4e-166, P = 5.4e-166
 Identities = 285/386 (73%), Positives = 328/386 (84%)

Query:     1 MGAGG------PSLQREKK--ESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYV 52
             MG GG       S   EKK   S ++ APHTKPPFTL  +K+AIPPHCF+RS +RSFSYV
Sbjct:     1 MGGGGRMSTVITSNNSEKKGGSSHLKRAPHTKPPFTLGDLKRAIPPHCFERSFVRSFSYV 60

Query:    53 VYDLSFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQ 112
              YD+  SFLFY  ATN+F  + SP +Y+AW +YW+FQGC+LTG+WVI HECGHHAFS+YQ
Sbjct:    61 AYDVCLSFLFYSIATNFFPYISSPLSYVAWLVYWLFQGCILTGLWVIGHECGHHAFSEYQ 120

Query:   113 WVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPP 172
               DD VGLI+HSALLVPYFSWKYSHRRHHSN  SLERDEVFVPK+KS++ +YSKY NNPP
Sbjct:   121 LADDIVGLIVHSALLVPYFSWKYSHRRHHSNIGSLERDEVFVPKSKSKISWYSKYSNNPP 180

Query:   173 GRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAAT 232
             GR LTL  TL LGWPLYLA NVSGRPYDRFACH+DP  PI+S+RERLQIYI+D GIFA T
Sbjct:   181 GRVLTLAATLLLGWPLYLAFNVSGRPYDRFACHYDPYGPIFSERERLQIYIADLGIFATT 240

Query:   233 YVLYRVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALST 292
             +VLY+  MAKGLAW++ +YGVPLLIVN FLV+ITYLQHTHPA+P Y SSEWDWLRGA+ T
Sbjct:   241 FVLYQATMAKGLAWVMRIYGVPLLIVNCFLVMITYLQHTHPAIPRYGSSEWDWLRGAMVT 300

Query:   293 VDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAW 352
             VDRDYGVLNKVFHNI DTHVAHHLF+T+PHYHAMEAT A+KPI+GEYY++DG PFYKA W
Sbjct:   301 VDRDYGVLNKVFHNIADTHVAHHLFATVPHYHAMEATKAIKPIMGEYYRYDGTPFYKALW 360

Query:   353 REAKECLYVEPDENSPTKGLFWYRNK 378
             REAKECL+VEPDE +PT+G+FWYRNK
Sbjct:   361 REAKECLFVEPDEGAPTQGVFWYRNK 386
GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IDA
TAIR|locus:2099297 FAD2 "fatty acid desaturase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000055218 odeA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0003001 FAD2 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59WT3 FAD2 "Likely delta-12 fatty acid desaturase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ASPGD|ASPL0000066189 an2 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0006277 FAD3 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5AL44 FAD3 "Likely delta-12 fatty acid desaturase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
UNIPROTKB|Q9Y8H5 Q9Y8H5 "Delta(12) fatty acid desaturase" [Mortierella alpina (taxid:64518)] Back     alignment and assigned GO terms
TAIR|locus:2005508 FAD3 "fatty acid desaturase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P46313FAD6E_ARATH1, ., 1, 4, ., 1, 9, ., -0.72321.00.9895yesno
Q39287FAD6E_BRAJU1, ., 1, 4, ., 1, 9, ., -0.72200.99730.9843N/Ano
O81931FAD12_CREAL1, ., 1, 4, ., 9, 9, ., 3, 30.57020.98680.9973N/Ano
P48631FD6E2_SOYBN1, ., 1, 4, ., 1, 9, ., -0.77541.00.9895yesno
P48630FD6E1_SOYBN1, ., 1, 4, ., 1, 9, ., -0.75460.99470.9741nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.190.691
4th Layer1.14.19.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
PLN02505381 PLN02505, PLN02505, omega-6 fatty acid desaturase 0.0
cd03507222 cd03507, Delta12-FADS-like, The Delta12 Fatty Acid 6e-77
PLN02498450 PLN02498, PLN02498, omega-3 fatty acid desaturase 1e-67
COG3239343 COG3239, DesA, Fatty acid desaturase [Lipid metabo 9e-35
PLN02598421 PLN02598, PLN02598, omega-6 fatty acid desaturase 7e-25
pfam00487251 pfam00487, FA_desaturase, Fatty acid desaturase 2e-24
cd01060122 cd01060, Membrane-FADS-like, The membrane fatty ac 2e-15
cd03511285 cd03511, Rhizopine-oxygenase-like, This CD include 6e-11
cd03506204 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid D 3e-07
pfam11960135 pfam11960, DUF3474, Domain of unknown function (DU 4e-06
cd01060122 cd01060, Membrane-FADS-like, The membrane fatty ac 0.003
>gnl|CDD|178121 PLN02505, PLN02505, omega-6 fatty acid desaturase Back     alignment and domain information 
 Score =  741 bits (1914), Expect = 0.0
 Identities = 302/383 (78%), Positives = 333/383 (86%), Gaps = 6/383 (1%)

Query: 1   MGAGG----PSLQREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDL 56
           MGAGG    P+  ++   S ++  P +KPPFTL  IKKAIPPHCFKRS+LRSFSY+VYDL
Sbjct: 1   MGAGGRMSVPTSSKKGSASAVKRVPSSKPPFTLGDIKKAIPPHCFKRSVLRSFSYLVYDL 60

Query: 57  SFSFLFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDD 116
             + L YY ATNY  LLP P +Y+AWP+YW  QGCVLTGVWVIAHECGHHAFSDYQW+DD
Sbjct: 61  LIAALLYYVATNYIPLLPGPLSYVAWPLYWAAQGCVLTGVWVIAHECGHHAFSDYQWLDD 120

Query: 117 TVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRAL 176
           TVGL+LHSALLVPYFSWKYSHRRHHSNT SLERDEVFVPK KS +P+YSKY NNPPGR L
Sbjct: 121 TVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSALPWYSKYLNNPPGRLL 180

Query: 177 TLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLY 236
            ++V LTLGWPLYLA NVSGRPYDRFACHFDP SPI++DRERLQIYISDAGI A ++ LY
Sbjct: 181 HIVVQLTLGWPLYLAFNVSGRPYDRFACHFDPYSPIFNDRERLQIYISDAGILAVSFGLY 240

Query: 237 RVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRD 296
           R+A AKGLAW++CVYGVPLLIVN FLVLITYLQHTHPALPHY+SSEWDWLRGAL+TVDRD
Sbjct: 241 RLAAAKGLAWVLCVYGVPLLIVNAFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRD 300

Query: 297 YGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAK 356
           YG+LNKVFHNITDTHVAHHLFSTMPHYHAMEAT A+KPILGEYYQFDG P YKA WREAK
Sbjct: 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPVYKALWREAK 360

Query: 357 ECLYVEPDENSPTKGLFWYRNKL 379
           EC+YVEPDE    KG+FWY NK 
Sbjct: 361 ECIYVEPDEGG--KGVFWYNNKF 381

Length = 381
>gnl|CDD|239584 cd03507, Delta12-FADS-like, The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria Back     alignment and domain information
>gnl|CDD|215275 PLN02498, PLN02498, omega-3 fatty acid desaturase Back     alignment and domain information
>gnl|CDD|225779 COG3239, DesA, Fatty acid desaturase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|215323 PLN02598, PLN02598, omega-6 fatty acid desaturase Back     alignment and domain information
>gnl|CDD|215943 pfam00487, FA_desaturase, Fatty acid desaturase Back     alignment and domain information
>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information
>gnl|CDD|239588 cd03511, Rhizopine-oxygenase-like, This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins Back     alignment and domain information
>gnl|CDD|239583 cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria Back     alignment and domain information
>gnl|CDD|221342 pfam11960, DUF3474, Domain of unknown function (DUF3474) Back     alignment and domain information
>gnl|CDD|238511 cd01060, Membrane-FADS-like, The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 379
PLN02505381 omega-6 fatty acid desaturase 100.0
PLN02498450 omega-3 fatty acid desaturase 100.0
PLN02598421 omega-6 fatty acid desaturase 100.0
cd03507222 Delta12-FADS-like The Delta12 Fatty Acid Desaturas 100.0
PLN03198526 delta6-acyl-lipid desaturase; Provisional 100.0
PLN03199485 delta6-acyl-lipid desaturase-like protein; Provisi 100.0
COG3239343 DesA Fatty acid desaturase [Lipid metabolism] 100.0
cd03511285 Rhizopine-oxygenase-like This CD includes the puta 100.0
cd03506204 Delta6-FADS-like The Delta6 Fatty Acid Desaturase 100.0
cd03508289 Delta4-sphingolipid-FADS-like The Delta4-sphingoli 100.0
cd03514207 CrtR_beta-carotene-hydroxylase Beta-carotene hydro 100.0
cd03513225 CrtW_beta-carotene-ketolase Beta-carotene ketolase 99.98
cd03509288 DesA_FADS-like Fatty acid desaturase protein famil 99.97
PLN02579323 sphingolipid delta-4 desaturase 99.97
cd03510175 Rhizobitoxine-FADS-like This CD includes the dihyd 99.97
PF00487257 FA_desaturase: Fatty acid desaturase This entry is 99.97
KOG4232430 consensus Delta 6-fatty acid desaturase/delta-8 sp 99.96
KOG2987324 consensus Fatty acid desaturase [Lipid transport a 99.89
cd03512314 Alkane-hydroxylase Alkane hydroxylase is a bacteri 99.8
cd01060122 Membrane-FADS-like The membrane fatty acid desatur 99.73
PF11960136 DUF3474: Domain of unknown function (DUF3474); Int 98.59
COG1398289 OLE1 Fatty-acid desaturase [Lipid metabolism] 98.53
PLN02220299 delta-9 acyl-lipid desaturase 98.36
KOG1600321 consensus Fatty acid desaturase [Lipid transport a 97.62
cd03505178 Delta9-FADS-like The Delta9 Fatty Acid Desaturase 97.39
>PLN02505 omega-6 fatty acid desaturase Back     alignment and domain information 
Probab=100.00  E-value=1.2e-74  Score=552.44  Aligned_cols=377  Identities=80%  Similarity=1.435  Sum_probs=332.2

Q ss_pred             CCCCCCCc----cccccccccCCCCCCCCCCCHHHHHHhcCCCCcccChHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 040843            1 MGAGGPSL----QREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSFLFYYTATNYFHLLPSP   76 (379)
Q Consensus         1 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ir~~lp~~~f~~~~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~   76 (379)
                      |++++-++    +.++++...+..|.++|++|++|||+++|++||++|++|++.++++|+++++++++++..+.+.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~tl~~ir~aiP~~~f~~s~~rs~~~v~~d~~~i~~~~~~a~~~~~~~p~~   80 (381)
T PLN02505          1 MGAGGRMSVPTSSKKGSASAVKRVPSSKPPFTLGDIKKAIPPHCFKRSVLRSFSYLVYDLLIAALLYYVATNYIPLLPGP   80 (381)
T ss_pred             CCCCCcCCCCccccCccccccccCCCCCCCccHHHHHHhCCHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence            67777665    22356666788888899999999999999999999999999999999999998877655343334555


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhHhhccccccCCCCchhhHHHHHHHHhhcccchHHhHHhhhccccCCCCCCCCCccccc
Q 040843           77 FAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPK  156 (379)
Q Consensus        77 ~~~~~~~l~~v~~G~~~~~l~~l~Hda~H~~~~~~~~~N~~~G~l~~~~~~~p~~~wr~~H~~HH~~tn~~~~Dpd~~p~  156 (379)
                      +.+.+++++++++|.++.++++++|||+|+++++++++|+++|.+++.+++.|+..||.+|+.||++||+.++||++.|.
T Consensus        81 ~~~~l~~~~~~~~G~~~~~l~vl~HDcgH~s~~~~~~lN~~vG~i~~~~ll~p~~~Wr~~H~~HH~~tn~~~~D~~~~P~  160 (381)
T PLN02505         81 LSYVAWPLYWAAQGCVLTGVWVIAHECGHHAFSDYQWLDDTVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPK  160 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhCChHHHHHHHHHHHHHHcCCHHHHHHHHHHHhhccCCCCCCccccCc
Confidence            56778888999999999999999999999999999999999999999899999999999999999999999999999887


Q ss_pred             ccccchhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccccCCCCCCCChhhhhHHHHHHHHHHHHHHHHH
Q 040843          157 TKSEVPFYSKYFNNPPGRALTLLVTLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLY  236 (379)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  236 (379)
                      +++++....+..++|+.++..++++..+|||+|++.+..++.+.+..++++|.+++++++++.++.+++++++++.++++
T Consensus       161 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~p~yl~~~~~g~~~~~~~~hf~p~s~lf~~~er~~v~~S~~~i~~~~~~l~  240 (381)
T PLN02505        161 KKSALPWYSKYLNNPPGRLLHIVVQLTLGWPLYLAFNVSGRPYDRFACHFDPYSPIFNDRERLQIYISDAGILAVSFGLY  240 (381)
T ss_pred             CHHHHhHHHHHhcChHHHHHHHHHHHHhHHHHHHHhhhcCCCCCcccccCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            76654434444578887777766788899999999888876655567889998888888999999999988888877776


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCccCCCCcchhhhhhhcccCCCcchHHHhcCcccchhhhhh
Q 040843          237 RVAMAKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHL  316 (379)
Q Consensus       237 ~~~~~~g~~~~l~~~l~P~~~~~~~~~~~~~~~H~~~~~p~~~~~~~~~~~~~l~T~~~~~~~l~~l~~~i~nyH~~HHl  316 (379)
                      .++...|++.++.+|++|+++++.++.+++|+||++|++|++++++|++.++|+.|+|++|++++++++||+++|+.||+
T Consensus       241 ~~~~~~G~~~~l~~y~vP~lv~~~wlv~itylqHt~~~ip~~~~~~W~~~rgAl~tvdr~yg~~~~l~h~I~~~Hv~HHl  320 (381)
T PLN02505        241 RLAAAKGLAWVLCVYGVPLLIVNAFLVLITYLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHL  320 (381)
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccCCCCcChhhccceeccCcchHHHHHHccCCcccchhhc
Confidence            66666799999999999999999999999999999999999999999999999999999999999999999669999999


Q ss_pred             cCCCCccCHHHHHHHHHhhhhhccccCCchHHHHHHHHhhcCEeecCCCCCCCcceEEeecCC
Q 040843          317 FSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLYVEPDENSPTKGLFWYRNKL  379 (379)
Q Consensus       317 fP~iP~y~Lp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~  379 (379)
                      +|+||+|||+||++.+|+.++++|++++.++++++|++.|+|++||+|+|.  +||++||++.
T Consensus       321 ~srIP~Y~l~eA~~aik~~lg~~y~~~~~~~~~~l~~~~~~C~~v~~~~~~--~~v~~~~~~~  381 (381)
T PLN02505        321 FSTMPHYHAMEATKAIKPILGEYYQFDGTPVYKALWREAKECIYVEPDEGG--KGVFWYNNKF  381 (381)
T ss_pred             cCCCCCCCHHHHHHHHHHHhHHHhcCCCCcHHHHHHHHhcceEEeCcCCCC--CceEEEecCC
Confidence            999999999999999999999999998999999999999999999988663  8999999974

>PLN02498 omega-3 fatty acid desaturase Back     alignment and domain information
>PLN02598 omega-6 fatty acid desaturase Back     alignment and domain information
>cd03507 Delta12-FADS-like The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria Back     alignment and domain information
>PLN03198 delta6-acyl-lipid desaturase; Provisional Back     alignment and domain information
>PLN03199 delta6-acyl-lipid desaturase-like protein; Provisional Back     alignment and domain information
>COG3239 DesA Fatty acid desaturase [Lipid metabolism] Back     alignment and domain information
>cd03511 Rhizopine-oxygenase-like This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins Back     alignment and domain information
>cd03506 Delta6-FADS-like The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria Back     alignment and domain information
>cd03508 Delta4-sphingolipid-FADS-like The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase (MLD), reported to modulate biosynthesis of the epidermal growth factor receptor; and other related proteins Back     alignment and domain information
>cd03514 CrtR_beta-carotene-hydroxylase Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae Back     alignment and domain information
>cd03513 CrtW_beta-carotene-ketolase Beta-carotene ketolase/oxygenase (CrtW, also known as CrtO), the carotenoid astaxanthin biosynthetic enzyme, initially catalyzes the addition of two keto groups to carbons C4 and C4' of beta-carotene Back     alignment and domain information
>cd03509 DesA_FADS-like Fatty acid desaturase protein family subgroup, a delta-12 acyl-lipid desaturase-like, DesA-like, yet uncharacterized subgroup of membrane fatty acid desaturase proteins found in alpha-, beta-, and gamma-proteobacteria Back     alignment and domain information
>PLN02579 sphingolipid delta-4 desaturase Back     alignment and domain information
>cd03510 Rhizobitoxine-FADS-like This CD includes the dihydrorhizobitoxine fatty acid desaturase (RtxC) characterized in Bradyrhizobium japonicum USDA110, and other related proteins Back     alignment and domain information
>PF00487 FA_desaturase: Fatty acid desaturase This entry is only a subset of the Pfam family Back     alignment and domain information
>KOG4232 consensus Delta 6-fatty acid desaturase/delta-8 sphingolipid desaturase [Lipid transport and metabolism] Back     alignment and domain information
>KOG2987 consensus Fatty acid desaturase [Lipid transport and metabolism] Back     alignment and domain information
>cd03512 Alkane-hydroxylase Alkane hydroxylase is a bacterial, integral-membrane di-iron enzyme that shares a requirement for iron and oxygen for activity similar to that of the non-heme integral-membrane acyl coenzyme A (CoA) desaturases and acyl lipid desaturases Back     alignment and domain information
>cd01060 Membrane-FADS-like The membrane fatty acid desaturase (Membrane_FADS)-like CD includes membrane FADSs, alkane hydroxylases, beta carotene ketolases (CrtW-like), hydroxylases (CrtR-like), and other related proteins Back     alignment and domain information
>PF11960 DUF3474: Domain of unknown function (DUF3474); InterPro: IPR021863 This presumed domain is functionally uncharacterised Back     alignment and domain information
>COG1398 OLE1 Fatty-acid desaturase [Lipid metabolism] Back     alignment and domain information
>PLN02220 delta-9 acyl-lipid desaturase Back     alignment and domain information
>KOG1600 consensus Fatty acid desaturase [Lipid transport and metabolism] Back     alignment and domain information
>cd03505 Delta9-FADS-like The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00