Citrus Sinensis ID: 040879

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80---
Protein Sequence
MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNNEGTSRIYYDSERVSPGGPDPKHH
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MASLKFWACLALLLMTISRfesrplennyperkNNVVRKIWQEFLLEKTREELEVKLgnnegtsriyydservspggpdpkhh
Flexible Loop (DISEMBL)
MASLKFWACLALLLMTISRfesrplennyperknnvvRKIWQEFLLEKTREELevklgnnegtsriyydservspggpdpkhh
Low Complexity Region (SEG)
MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNNEGTSRIYYDSERVSPGGPDPKHH
Disordered region (IsUnstruct)
***LKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVK***************************
Disordered Region (DISOPRED)
*ASLKFWACLALLLMTISRF***************************************************************
Disordered Region (DISEMBL)
MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNNEGTSRIYYDSER***********
Disordered Region (DISPRO)
**SLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKL**************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNNEGTSRIYYDSERVSPGGPDPKHH
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	83	2.2.26 [Sep-21-2011]
Q8S8N0	80	CLAVATA3/ESR (CLE)-relate	yes	no	0.963	1.0	0.445	2e-08
Q3ECD6	74	CLAVATA3/ESR (CLE)-relate	no	no	0.879	0.986	0.380	2e-05

>sp|Q8S8N0|CLE4_ARATH CLAVATA3/ESR (CLE)-related protein 4 OS=Arabidopsis thaliana GN=CLE4 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 1  MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
          MAS K W CL LLL+  S  + RPL        +  +RKI +E L  K  EEL+V+  + 
Sbjct: 1  MASFKLWVCLILLLLEFSVHQCRPLVAEESPSDSGNIRKIMRELL--KRSEELKVRSKDG 58

Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
          + T     DS+R+SPGGPDP+HH
Sbjct: 59 Q-TVLGTLDSKRLSPGGPDPRHH 80

Extracellular signal peptide that regulates cell fate.
Arabidopsis thaliana (taxid: 3702)

>sp|Q3ECD6|CLE1_ARATH CLAVATA3/ESR (CLE)-related protein 1 OS=Arabidopsis thaliana GN=CLE1 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 11/84 (13%)

Query: 1  MASLKFWACLALLLMTISRFE-SRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGN 59
          MA+LKF  CL L+ +++SR   SRP+  N    K   +  I  E +L+ + E+L      
Sbjct: 1  MANLKFLLCLFLICVSLSRSSASRPMFPNADGIKRGRM-MIEAEEVLKASMEKL------ 53

Query: 60 NEGTSRIYYDSERVSPGGPDPKHH 83
               R + +S R+SPGGPDP+HH
Sbjct: 54 ---MERGFNESMRLSPGGPDPRHH 74

Extracellular signal peptide that regulates cell fate.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	83
224135399	79	predicted protein [Populus trichocarpa]	0.951	1.0	0.445	3e-12
297822839	81	hypothetical protein ARALYDRAFT_482033 [	0.975	1.0	0.457	4e-08
224116942	76	predicted protein [Populus trichocarpa]	0.915	1.0	0.409	9e-07
30684811	80	protein CLAVATA3/ESR-related 4 [Arabidop	0.963	1.0	0.445	1e-06
147864715	81	hypothetical protein VITISV_023825 [Viti	0.927	0.950	0.385	2e-06
255563068	80	conserved hypothetical protein [Ricinus	0.915	0.95	0.409	8e-06
255557075	75	conserved hypothetical protein [Ricinus	0.855	0.946	0.382	0.0002

>gi|224135399|ref|XP_002327208.1| predicted protein [Populus trichocarpa] gi|222835578|gb|EEE74013.1| predicted protein [Populus trichocarpa]

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 58/83 (69%), Gaps = 4/83 (4%)

Query: 1  MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
          MA+LKFW CL LL +T++  E+R L+  Y  RKN  + +I QE  L++  ++++V+  ++
Sbjct: 1  MANLKFWVCLVLLFLTLAMSETRHLDQPYLGRKN--LARILQE--LQEKSKQVDVRFIDD 56

Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
             +R  Y+S+R+SPGGPDPKHH
Sbjct: 57 GDVARSPYESKRLSPGGPDPKHH 79

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822839|ref|XP_002879302.1| hypothetical protein ARALYDRAFT_482033 [Arabidopsis lyrata subsp. lyrata] gi|297325141|gb|EFH55561.1| hypothetical protein ARALYDRAFT_482033 [Arabidopsis lyrata subsp. lyrata]

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 1  MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
          MAS K W CL LLL+ IS  + RPL        +  +RKI +E L  K  EEL+V+    
Sbjct: 1  MASFKLWVCLILLLLEISVHQCRPLVAEESRSDSGNIRKIMRELL--KRSEELKVRSKGG 58

Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
          E       DS+R+SPGGPDP+HH
Sbjct: 59 ETVLGNTLDSKRLSPGGPDPRHH 81

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116942|ref|XP_002317433.1| predicted protein [Populus trichocarpa] gi|222860498|gb|EEE98045.1| predicted protein [Populus trichocarpa]

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 7/83 (8%)

Query: 1  MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
          MA ++F+ C+ L+L++ ++ E+RPL+ +   R  N++R I     L +T E   VK GN 
Sbjct: 1  MACVRFYLCVMLILLSFAQSETRPLDPSAVRR--NLIRTIRA---LGET-ETYNVKQGN- 53

Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
          EG     + S+RVSPGGPD +HH
Sbjct: 54 EGMIGGRFSSKRVSPGGPDAQHH 76

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30684811|ref|NP_850157.1| protein CLAVATA3/ESR-related 4 [Arabidopsis thaliana] gi|75160483|sp|Q8S8N0.1|CLE4_ARATH RecName: Full=CLAVATA3/ESR (CLE)-related protein 4; Contains: RecName: Full=CLE4p; Flags: Precursor gi|20197332|gb|AAM15029.1|AC005311_18 CLE6, putative [Arabidopsis thaliana] gi|46931204|gb|AAT06406.1| At2g31081 [Arabidopsis thaliana] gi|50253528|gb|AAT71966.1| At2g31081 [Arabidopsis thaliana] gi|330253394|gb|AEC08488.1| protein CLAVATA3/ESR-related 4 [Arabidopsis thaliana]

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 1  MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
          MAS K W CL LLL+  S  + RPL        +  +RKI +E L  K  EEL+V+  + 
Sbjct: 1  MASFKLWVCLILLLLEFSVHQCRPLVAEESPSDSGNIRKIMRELL--KRSEELKVRSKDG 58

Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
          + T     DS+R+SPGGPDP+HH
Sbjct: 59 Q-TVLGTLDSKRLSPGGPDPRHH 80

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147864715|emb|CAN84071.1| hypothetical protein VITISV_023825 [Vitis vinifera]

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 1  MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
          MASL+FW CL L++++  R E +P     P  + N  + +     +E+ +EE + +L   
Sbjct: 1  MASLRFWVCLILVVLSFVRTEPQPXS---PFXEGNGRKSLGA--FIEQAKEEFKERL-RR 54

Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
          E  +R  Y   R SPGGPDPKHH
Sbjct: 55 EDDNRNTYKLXRQSPGGPDPKHH 77

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563068|ref|XP_002522538.1| conserved hypothetical protein [Ricinus communis] gi|223538229|gb|EEF39838.1| conserved hypothetical protein [Ricinus communis]

 Score = 54.7 bits (130), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 1  MASLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNN 60
          MA+L+F+ CL L+ +  S  ESRPL+ +   R  N++R I     + +T E   V+ G  
Sbjct: 1  MANLRFYGCLFLIFLAFSSSESRPLDPSLMRR--NLIRSIRA---MGET-EVYSVRQG-K 53

Query: 61 EGTSRIYYDSERVSPGGPDPKHH 83
          E  S+    S+R SPGGPDP HH
Sbjct: 54 ERISKGQLGSKRASPGGPDPHHH 76

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557075|ref|XP_002519570.1| conserved hypothetical protein [Ricinus communis] gi|223541267|gb|EEF42819.1| conserved hypothetical protein [Ricinus communis]

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 10/81 (12%)

Query: 3  SLKFWACLALLLMTISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGNNEG 62
          ++KF  CL L++++ SR E+RP+  N+ E       K     L+E T+E L+  L   E 
Sbjct: 5  NVKFLLCLVLVMLSFSRSETRPI--NHQE-------KTGDRSLIEITKEVLKESLRRQEL 55

Query: 63 TSRIYYDSERVSPGGPDPKHH 83
              +  S+R SPGGPDP HH
Sbjct: 56 IGG-FNQSKRRSPGGPDPHHH 75

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	83
TAIR|locus:504955980	80	CLE4 "AT2G31081" [Arabidopsis	0.939	0.975	0.458	3.9e-12
TAIR|locus:505006104	83	CLE3 "AT1G06225" [Arabidopsis	0.939	0.939	0.443	8.4e-10
TAIR|locus:504956162	74	CLE1 "AT1G73165" [Arabidopsis	0.879	0.986	0.404	1e-06
TAIR|locus:505006281	81	CLE6 "AT2G31085" [Arabidopsis	0.385	0.395	0.558	0.00013
TAIR|locus:2124588	75	CLE2 "AT4G18510" [Arabidopsis	0.879	0.973	0.376	0.00035
TAIR|locus:504955982	81	CLE5 "AT2G31083" [Arabidopsis	0.469	0.481	0.463	0.00045

TAIR|locus:504955980 CLE4 "AT2G31081" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 39/85 (45%), Positives = 52/85 (61%)

Query:     1 MASLKFWACLALLLMTISRFESRPL-ENNYPERKNNVVRKIWQEFLLEKTREELEVKLGN 59
             MAS K W CL LLL+  S  + RPL     P    N+ RKI +E L  K  EEL+V+  +
Sbjct:     1 MASFKLWVCLILLLLEFSVHQCRPLVAEESPSDSGNI-RKIMRELL--KRSEELKVR--S 55

Query:    60 NEGTSRI-YYDSERVSPGGPDPKHH 83
              +G + +   DS+R+SPGGPDP+HH
Sbjct:    56 KDGQTVLGTLDSKRLSPGGPDPRHH 80

GO:0005102 "receptor binding" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0048046 "apoplast" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=IMP

TAIR|locus:505006104 CLE3 "AT1G06225" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 39/88 (44%), Positives = 52/88 (59%)

Query:     1 MASLKFWACLALLLMT--ISRFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLG 58
             MASLK W CL LLL+    S  E RPL        ++ ++KI +E L E+ +E   +K G
Sbjct:     1 MASLKLWVCLVLLLVLELTSVHECRPLVAEERFSGSSRLKKIRRE-LFERLKE---MK-G 55

Query:    59 NNEGTSRIY---YDSERVSPGGPDPKHH 83
              +EG   I     DS+R+SPGGPDP+HH
Sbjct:    56 RSEGEETILGNTLDSKRLSPGGPDPRHH 83

GO:0005102 "receptor binding" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0048046 "apoplast" evidence=RCA

TAIR|locus:504956162 CLE1 "AT1G73165" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%)

Query:     1 MASLKFWACLALLLMTISRFE-SRPLENNYPERKNNVVRKIWQEFLLEKTREELEVKLGN 59
             MA+LKF  CL L+ +++SR   SRP+  N    K   +  I  E +L+ + E+L ++ G 
Sbjct:     1 MANLKFLLCLFLICVSLSRSSASRPMFPNADGIKRGRMM-IEAEEVLKASMEKL-MERGF 58

Query:    60 NEGTSRIYYDSERVSPGGPDPKHH 83
             NE        S R+SPGGPDP+HH
Sbjct:    59 NE--------SMRLSPGGPDPRHH 74

GO:0005102 "receptor binding" evidence=ISS

GO:0007165 "signal transduction" evidence=ISS

GO:0048046 "apoplast" evidence=RCA

GO:0033612 "receptor serine/threonine kinase binding" evidence=IPI

TAIR|locus:505006281 CLE6 "AT2G31085" [Arabidopsis thaliana (taxid:3702)]

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 19/34 (55%), Positives = 22/34 (64%)

Query:    52 ELEVKLGNNEGTS--RIYYDSERVSPGGPDPKHH 83
             EL + L   +G    R   DSERVSPGGPDP+HH
Sbjct:    48 ELGIDLSKFKGQDERRFLVDSERVSPGGPDPQHH 81

GO:0005102 "receptor binding" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0048046 "apoplast" evidence=RCA

TAIR|locus:2124588 CLE2 "AT4G18510" [Arabidopsis thaliana (taxid:3702)]

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 32/85 (37%), Positives = 40/85 (47%)

Query:     1 MASLKFWACLALLLMTIS-RFESRPLENNYPERKNNVVRKIWQEFLLEKTREELEV-KLG 58
             MA L F  C  L L+  S    SRPLE     R    VR +     +E T   +E  +  
Sbjct:     1 MAKLSFTFCFLLFLLLSSIAAGSRPLEG---ARVGVKVRGLSPS--IEATSPTVEDDQAA 55

Query:    59 NNEGTSRIYYDSERVSPGGPDPKHH 83
              + G S      ER+SPGGPDP+HH
Sbjct:    56 GSHGKS-----PERLSPGGPDPQHH 75

GO:0005102 "receptor binding" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0048046 "apoplast" evidence=IDA;RCA

GO:0033612 "receptor serine/threonine kinase binding" evidence=IPI

GO:0045168 "cell-cell signaling involved in cell fate commitment" evidence=IDA

TAIR|locus:504955982 CLE5 "AT2G31083" [Arabidopsis thaliana (taxid:3702)]

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query:    43 EFLLEKTREELEVKLGNNEGTSRIYYDSERVSPGGPDPKHH 83
             + LL +   +L    G+NE   R    S+RVSPGGPDP+HH
Sbjct:    43 QVLLHELGFDLSKFKGHNE--RRFLVSSDRVSPGGPDPQHH 81


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.407    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       83        83   0.00091  102 3  11 22  0.47    29
                                                     29  0.44    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  545 (58 KB)
  Total size of DFA:  114 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.36u 0.26s 11.62t   Elapsed:  00:00:01
  Total cpu time:  11.36u 0.26s 11.62t   Elapsed:  00:00:01
  Start:  Mon May 20 21:34:22 2013   End:  Mon May 20 21:34:23 2013

GO:0005102 "receptor binding" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0048046 "apoplast" evidence=RCA

GO:0033612 "receptor serine/threonine kinase binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8S8N0	CLE4_ARATH	No assigned EC number	0.4457	0.9638	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	83
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	84.96

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=84.96  E-value=0.68  Score=30.47  Aligned_cols=25  Identities=40%  Similarity=0.384  Sum_probs=13.5

Q ss_pred             CCchHHHHHHHHH-H-HHHh-hccCCCC
Q 040879            1 MASLKFWACLALL-L-MTIS-RFESRPL   25 (83)
Q Consensus         1 MA~l~~~lc~iLl-l-l~~s-~~e~R~L   25 (83)
                      ||+.+|+|+.+|| + |++| ..++|.+
T Consensus         1 MaSK~~llL~l~LA~lLlisSevaa~~~   28 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLISSEVAAREL   28 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhhhhHHh
Confidence            8988776664443 2 2333 2346665

Some of them may be involved in resistance to environmental stress [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00