Citrus Sinensis ID: 040903

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------
Protein Sequence
MKGREAKGAPPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHHHQHHLKKLNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQSVMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDDEDDEDEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVEDSSAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEEEEEEVTQVKKTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWKR
Secondary Structure (PSIPRED)
cccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHcccccccccccHHHHccccHHHHHHHHHHHccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccEEEEEEccccccccccHHHccccccccccccccccccccHHHHccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEcccccccccEEEcccccHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEcccHHHHHccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccHHHHcccccccccccccEEEEEEEEEcccccccccHHHHHHHHHHHHHccccccccccHHHHHHccHHHHHHHHHHHHcccEEEEEccccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHccccccccHHHHHcccccHHHHHHHHcccccHcccccHHccHHHHHHHHHHHHHcccccEEEEEcccccEEEEHHHHHcEEEEcccccHHHccccccc
Coil and Loop (DISEMBL)
mkgreakgappadllvcfpsrahltlmpkplcsparpaeankrinhqhhsqsqhqhphhhhqhhlkklnikgaghasplmwaktkptgpeiaeptspkvtcagqikvrpkansckSWQSVMEEIERIHNNrnkhknkrpswaeSIGLKKEVMQFLTCLKNIrfdfrcfgafpradittddeddededqyhesnhlgvegsdgntdqassrTVFSKWFMVLQENQnncyykeekersgsvedssaaapaapppnaLLLMRcrsapaksrfedkaaekeeedkedddheeeeEEEEVTQVKKTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWKR
Flexible Loop (DISEMBL)
mkgreakgappadlLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHHHQHHLKKLNIKGAGHASPLMWAKTKptgpeiaeptspkvtcagqikvrpkanscksWQSVMEEIERIhnnrnkhknkrpsWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDDEDDEDEDQYHESnhlgvegsdgntdqASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVEDSSAAAPAAPPPNALLLMRCRSAPAksrfedkaaekeeedkedddheeeeeeeevtqvkktknlkslmeeekrnnkenlvVMAYDTDFYKISSdvaketwivdgmkdllsrsrswkr
Low Complexity Region (SEG)
MKGREAKGAPPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINhqhhsqsqhqhphhhhqhhLKKLNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQSVMEEIERIhnnrnkhknkrPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTddeddededQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVEDSSaaapaapppnalllMRCRSAPAKSRFedkaaekeeedkedddheeeeeeeeVTQVKKTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWKR
Disordered region (IsUnstruct)
*************LLVCFPSRAHLTL******************************************************************************************************************WAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRA************************************TVFSKWFMVLQENQNNCYY****************************************************************************************NLVVMAYDTDFYKISSDVAKETWIVDGMKD**********
Disordered Region (DISOPRED)
**************LVCFPS*****************************************************************************KVTCAGQ***********************************SWAESIGLKKEVMQFLTCLKNIRFDFRCFGAF*****************************************************************************APPPNALLLMRCRSA*******************************************************LVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRS*****
Disordered Region (DISEMBL)
**********PADLLVCFPSRAHLTLMPKPLCSPARPAEANKR************************LNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQSVMEEIERIHNNR*********WAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTD************SNHLG***********SSRTVFSKWFMVLQENQNNCYYK*******************PPPNALLLMRCRSAP***********************************KTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLL********
Disordered Region (DISPRO)
**********PADLLVCFPSRAHLTLMPKPLCS*************************************************************TSPKVTCAGQIKVRPKANSCKSWQSVMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRA***************************************SKWFMVLQE*************************AAPPPNALLL*RCRSAP**************************************************NKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSR******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKGREAKGAPPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHHHQHHLKKLNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQSVMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDDEDDEDEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVEDSSAAAPAAPPPNALLLMRCRSAPAKSRFEDxxxxxxxxxxxxxxxxxxxxxxxVTQVKKTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
224063213	339	predicted protein [Populus trichocarpa]	0.932	0.982	0.600	1e-107
225459336	332	PREDICTED: uncharacterized protein LOC10	0.927	0.996	0.631	1e-105
224084680	341	predicted protein [Populus trichocarpa]	0.938	0.982	0.614	1e-105
356518487	353	PREDICTED: uncharacterized protein LOC10	0.943	0.954	0.567	2e-97
356510191	293	PREDICTED: uncharacterized protein LOC10	0.809	0.986	0.539	4e-85
224127292	259	predicted protein [Populus trichocarpa]	0.703	0.969	0.615	1e-82
297839681	344	hypothetical protein ARALYDRAFT_476978 [	0.879	0.912	0.515	2e-77
15218227	342	uncharacterized protein [Arabidopsis tha	0.879	0.918	0.526	3e-77
449510475	264	PREDICTED: uncharacterized LOC101215043	0.652	0.882	0.524	7e-62
62321237	259	hypothetical protein [Arabidopsis thalia	0.703	0.969	0.551	8e-61

>gi|224063213|ref|XP_002301044.1| predicted protein [Populus trichocarpa] gi|222842770|gb|EEE80317.1| predicted protein [Populus trichocarpa]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/363 (60%), Positives = 278/363 (76%), Gaps = 30/363 (8%)

Query: 1   MKGREAKGAPPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHH 60
           MKGRE++ AP ADLLVCFPSRAHLTLMPKP+CSPARP E +K   HQ+    + Q     
Sbjct: 1   MKGRESRRAPSADLLVCFPSRAHLTLMPKPICSPARPLEPSK--PHQNRHHHRQQR---- 54

Query: 61  HQHHLKKLNIKGAG-HASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQS 119
             HHLKK + +G G  ASPL+W KT+    E++EPTSPKVTCAGQIKVR KA+SCK+WQS
Sbjct: 55  -PHHLKKSSPRGGGSRASPLLWTKTRQMDSELSEPTSPKVTCAGQIKVRHKASSCKNWQS 113

Query: 120 VMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFP-RADITT 178
           VMEEIERIH   +K   K+ +W +S+G KK++MQFLTCL+NIRFDFRCFG+FP ++DIT+
Sbjct: 114 VMEEIERIHI--SKKSTKKSTWLDSLGFKKDIMQFLTCLRNIRFDFRCFGSFPAQSDITS 171

Query: 179 DDEDDEDEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNC--YYKEE-KER 235
           +DE++ +E   ++ NH+   G+DG  D+  SRT+FSKWFM+LQENQN+   ++KE+ K++
Sbjct: 172 NDEEEYEEYGEYQENHV---GADGRIDKEDSRTIFSKWFMMLQENQNSTTGFFKEDAKQK 228

Query: 236 SGSVEDSSAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEEEEEEV 295
             S  D S AAP+ PPPNALLLMRCRSAPAKS       E+EEE++E+ D ++EE     
Sbjct: 229 ERSCNDESLAAPSVPPPNALLLMRCRSAPAKSW----QEEEEEEEEEEQDRKQEE----- 279

Query: 296 TQVKKTKNLKSLMEEEKRNN-KENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRS 354
              KK KNLK+LMEEE +N+ KENLVVM+YDTDFYK+S+D+AKETW+V GMKD ++RSRS
Sbjct: 280 ---KKGKNLKALMEEEGKNSKKENLVVMSYDTDFYKLSTDIAKETWVVGGMKDTVARSRS 336

Query: 355 WKR 357
           WKR
Sbjct: 337 WKR 339

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459336|ref|XP_002284185.1| PREDICTED: uncharacterized protein LOC100264413 [Vitis vinifera]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/358 (63%), Positives = 268/358 (74%), Gaps = 27/358 (7%)

Query: 1   MKGREAKGAPPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHH 60
           MKGRE K AP ADLLVCFPSRAHLTLMPKP+CSPARP+E +KR  HQHH    +      
Sbjct: 1   MKGREGKAAPSADLLVCFPSRAHLTLMPKPICSPARPSEPSKRHQHQHHQHHHNH----- 55

Query: 61  HQHHLKKLNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQSV 120
             HHLKK + +  G ASPL+WAKTKP G EI+EPTSPKVTCAGQIKVR K +SCK+WQSV
Sbjct: 56  -PHHLKKSSTRNGGQASPLLWAKTKPMGTEISEPTSPKVTCAGQIKVRHKTSSCKNWQSV 114

Query: 121 MEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDD 180
           MEEIERIHNN+ KHK KRP+W E++G KKE+MQFLTCL++IRFDFRCFG+FP +  T+DD
Sbjct: 115 MEEIERIHNNK-KHK-KRPTWVEALGFKKEIMQFLTCLRSIRFDFRCFGSFPESGNTSDD 172

Query: 181 EDDEDEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEE-KERSGSV 239
           E +ED DQY   N +GVE SD   D  +SRT+FSKWFMVLQENQ+    KEE KE+S S 
Sbjct: 173 E-EEDGDQYQH-NQVGVEESD---DNETSRTIFSKWFMVLQENQSCGSNKEEIKEKSKSY 227

Query: 240 EDSSAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEEEEEEVTQVK 299
            + SA AP+ PPPNALLLMRCRSAP+KS  E+K  EKE+E++E              + +
Sbjct: 228 GEESAVAPSVPPPNALLLMRCRSAPSKSWLEEKDKEKEKEEEE-------------EEDQ 274

Query: 300 KTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWKR 357
           + K    +MEEE +  KENLVVM Y+ DFYK SSD+AKETW+V G +D LSRSRSWKR
Sbjct: 275 EAKKAMLIMEEENKKKKENLVVMKYNNDFYKFSSDIAKETWVVGGARDPLSRSRSWKR 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084680|ref|XP_002307386.1| predicted protein [Populus trichocarpa] gi|222856835|gb|EEE94382.1| predicted protein [Populus trichocarpa]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/363 (61%), Positives = 278/363 (76%), Gaps = 28/363 (7%)

Query: 1   MKGREAKGAPPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHH 60
           MKGRE + AP ADLLVCFPSRAHLTLMPKP+CSPARP+E +K        +    H    
Sbjct: 1   MKGREIRRAPSADLLVCFPSRAHLTLMPKPICSPARPSETSK-------PRQNRHHHQQQ 53

Query: 61  HQHHLKKLNIKGAG-HASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQS 119
             HHLKK + +G G  ASPL+WAK K  G E++EPTSPKVTCAGQIKVR K +SCK+WQS
Sbjct: 54  RHHHLKKSSTRGVGIRASPLLWAKAKQMGSEVSEPTSPKVTCAGQIKVRHKESSCKNWQS 113

Query: 120 VMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFP-RADITT 178
           VMEEIE+IHN+R KH  K+ +W +S+G KK++M FLTCL+NIRFDFRCFG+FP  +DIT+
Sbjct: 114 VMEEIEKIHNSR-KH-TKKSTWIDSLGFKKDIMHFLTCLRNIRFDFRCFGSFPAHSDITS 171

Query: 179 DDEDDEDEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNC--YYKEE-KER 235
           DD++ ++E + ++ NH+GVEG + N D   SRT+FSKWFM+LQENQN+    +KEE K++
Sbjct: 172 DDDEVDEEYEGYQENHVGVEGRNDNED---SRTIFSKWFMMLQENQNSTTGLFKEEIKQK 228

Query: 236 SGSVEDSSAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEEEEEEV 295
             S  D S AAP+ PPPNALLLMRCRSAPAKS           +++E+D+ EEEEEE+  
Sbjct: 229 QRSCNDESVAAPSVPPPNALLLMRCRSAPAKS----------WQEEEEDEKEEEEEEDRK 278

Query: 296 TQVKKTKNLKSLMEEEKRNN-KENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRS 354
            + KK KNLK+LMEEEKRN+ KENLVVM+YDTDF K+S+D+AKETW+V GM+D LSRSRS
Sbjct: 279 EEEKKGKNLKALMEEEKRNSKKENLVVMSYDTDFNKLSTDIAKETWVVGGMRDPLSRSRS 338

Query: 355 WKR 357
           WKR
Sbjct: 339 WKR 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518487|ref|XP_003527910.1| PREDICTED: uncharacterized protein LOC100814916 [Glycine max]

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 211/372 (56%), Positives = 259/372 (69%), Gaps = 35/372 (9%)

Query: 1   MKGREAKG----APPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQH 56
           +KGRE K     AP ADLLVCFPSRAHLTLMPKP+CSPARP+E NKR          H +
Sbjct: 2   IKGREGKALAHAAPSADLLVCFPSRAHLTLMPKPICSPARPSEPNKR----------HHN 51

Query: 57  PHHHHQHHLKKLNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKS 116
            HHH +    +    G G ASPL+W KTK  G EI+EPTSPKVTCAGQIKVRPK  +C+S
Sbjct: 52  SHHHRKKSFSRGGGGGGGQASPLLWPKTKSMGSEISEPTSPKVTCAGQIKVRPKTTACRS 111

Query: 117 WQSVMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADI 176
           WQSVMEEIE+IH ++N  + KR SWAE++G KKE+MQFLTCL++IRFD RCFG+F   DI
Sbjct: 112 WQSVMEEIEKIHTDKN--QKKRLSWAETLGFKKEIMQFLTCLRSIRFDLRCFGSFSGTDI 169

Query: 177 TT-----DDEDDEDEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVL-QENQNNCYYK 230
            T     DDED+ + +   E  H+GVE SD      +S+TV SKWFMVL QENQ N   +
Sbjct: 170 ATEEDEDDDEDEVEVELIEEEKHVGVEESDNE----ASKTVLSKWFMVLQQENQTNNRRE 225

Query: 231 EEKERSGSVEDSSAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEE 290
           E +ER    E+ S    + PPPNALLLMRCRSAPAKS   ++     ++D E+   +EE+
Sbjct: 226 ETEERGDGNEEESV---SVPPPNALLLMRCRSAPAKSWVREREGGDHDDDDEEQQGKEEK 282

Query: 291 EEEEVTQVKKT-----KNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGM 345
           E  E  + K+      ++LKSLMEE+KR  KEN+VVM YD+DFY ISSD+AKETWIV G+
Sbjct: 283 ENAEREKEKEKGEKKGQSLKSLMEEDKR-KKENVVVMRYDSDFYDISSDIAKETWIVGGI 341

Query: 346 KDLLSRSRSWKR 357
           +DL+SRSRS KR
Sbjct: 342 RDLMSRSRSSKR 353

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510191|ref|XP_003523823.1| PREDICTED: uncharacterized protein LOC100787579 [Glycine max]

 Score =  321 bits (822), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 193/358 (53%), Positives = 229/358 (63%), Gaps = 69/358 (19%)

Query: 1   MKGREAKG-APPADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHH 59
           MK RE K  AP ADLLVCFPSRAHLTLMPKP+CSPARPAE NKR               H
Sbjct: 2   MKLREGKALAPSADLLVCFPSRAHLTLMPKPICSPARPAEPNKR---------------H 46

Query: 60  HHQHHLKKLNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQS 119
           H +   K  +  G G ASPL+WAKTK  G EI EPTSPKVTCAGQIKVRPK  SC+SWQS
Sbjct: 47  HRK---KSFSRGGGGPASPLLWAKTKSMGSEITEPTSPKVTCAGQIKVRPKTTSCRSWQS 103

Query: 120 VMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTD 179
           VMEEIE+IH   +K + KR  WAE++G KKE+MQFLTCL++IRFD RCFG+F   DI T+
Sbjct: 104 VMEEIEKIHT--DKKQRKRLGWAETLGFKKEIMQFLTCLRSIRFDLRCFGSFSETDIVTE 161

Query: 180 DEDDEDEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVL-QENQNNCYYKEEKERSGS 238
           +E++E+ED       +GVE  D      +SRTVFSKWFMVL QEN++    +E +ER   
Sbjct: 162 EEEEEEED-------VGVESDDNE----ASRTVFSKWFMVLQQENESKNRREETEERDYG 210

Query: 239 VEDSSAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEEEEEEVTQV 298
            E+ S    + PPPNALLLMRC SAPAKS   ++  EK E+  +                
Sbjct: 211 NEEESV---SVPPPNALLLMRCSSAPAKSWVREREKEKGEKKGQ---------------- 251

Query: 299 KKTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWK 356
               +LKSLME      KEN+VVM YD+DFY ISS+V        G  DL+ RSRSWK
Sbjct: 252 ----SLKSLME------KENVVVMRYDSDFYDISSEVG-------GTSDLMFRSRSWK 292

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127292|ref|XP_002320038.1| predicted protein [Populus trichocarpa] gi|222860811|gb|EEE98353.1| predicted protein [Populus trichocarpa]

 Score =  313 bits (801), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 168/273 (61%), Positives = 217/273 (79%), Gaps = 22/273 (8%)

Query: 90  EIAEPTSPKVTCAGQIKVRPKANSCKSWQSVMEEIERIHNNRNKHKNKRPSWAESIGLKK 149
           E++EPTSPKVTCAGQIKVR KA+SCK+WQSVMEEIERIH +R     K+ +W +S+G KK
Sbjct: 4   ELSEPTSPKVTCAGQIKVRHKASSCKNWQSVMEEIERIHISR--KSTKKSTWLDSLGFKK 61

Query: 150 EVMQFLTCLKNIRFDFRCFGAFP-RADITTDDEDDEDEDQYHESNHLGVEGSDGNTDQAS 208
           ++MQFLTCL+NIRFDFRCFG+FP ++DIT++DE++ +E   ++ NH+GV   DG  D+  
Sbjct: 62  DIMQFLTCLRNIRFDFRCFGSFPAQSDITSNDEEEYEEYGEYQENHVGV---DGRIDKED 118

Query: 209 SRTVFSKWFMVLQENQNNC--YYKEE-KERSGSVEDSSAAAPAAPPPNALLLMRCRSAPA 265
           SRT+FSKWFM+LQENQN+   ++KE+ K++  S  D S AAP+ PPPNALLLMRCRSAPA
Sbjct: 119 SRTIFSKWFMMLQENQNSTTGFFKEDAKQKERSCNDESLAAPSVPPPNALLLMRCRSAPA 178

Query: 266 KSRFEDKAAEKEEEDKEDDDHEEEEEEEEVTQVKKTKNLKSLMEEEKRNNK-ENLVVMAY 324
           KS       E+EEE++E+ D ++EE        KK KNLK+LMEEE +N+K ENLVVM+Y
Sbjct: 179 KSW----QEEEEEEEEEEQDRKQEE--------KKGKNLKALMEEEGKNSKKENLVVMSY 226

Query: 325 DTDFYKISSDVAKETWIVDGMKDLLSRSRSWKR 357
           DTDFYK+S+D+AKETW+V GMKD ++RSRSWKR
Sbjct: 227 DTDFYKLSTDIAKETWVVGGMKDTVARSRSWKR 259

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839681|ref|XP_002887722.1| hypothetical protein ARALYDRAFT_476978 [Arabidopsis lyrata subsp. lyrata] gi|297333563|gb|EFH63981.1| hypothetical protein ARALYDRAFT_476978 [Arabidopsis lyrata subsp. lyrata]

 Score =  295 bits (755), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/357 (51%), Positives = 238/357 (66%), Gaps = 43/357 (12%)

Query: 12  ADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHHHQHHLKKLNIK 71
           ADLLVCFPSRAHL L PKP+CSP+RP+++           S ++ P H  Q  L KL+  
Sbjct: 18  ADLLVCFPSRAHLALTPKPICSPSRPSDS-----------STNRRPQHRRQ--LSKLSGG 64

Query: 72  GAGHASPLMWAKTKPT----GPEIAEPTSPKVTCAGQIKVRPK--ANSCKSWQSVMEEIE 125
           G GH SP++WAK   +    G EIAEPTSPKVTCAGQIKVRP       K+WQSVMEEIE
Sbjct: 65  GGGHGSPVLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIE 124

Query: 126 RIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDDEDDED 185
           RIH+NR++ K          GLKK+VM FLTCL+NI+FDFRCFG F  AD+T+DD+++ED
Sbjct: 125 RIHDNRSQSK--------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEED 176

Query: 186 EDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVED--SS 243
           +D   E             ++ +S+TVFSKWFMVLQE Q+N    +   +     D   +
Sbjct: 177 DDDDDEEEE------GEREEEENSKTVFSKWFMVLQEEQSNQDDDKNNNKCDEKRDLEDT 230

Query: 244 AAAPAAPPPNALLLMRCRSAPAKSRFED----KAAEKEEEDKEDDDHEEEEEEEEVTQVK 299
              PA PPPNALLLMRCRSAPAKS  E+    K  ++  E+++++  E+E E++E +   
Sbjct: 231 ETEPAVPPPNALLLMRCRSAPAKSWLEERMKVKTEQENREEQKEEKEEKETEDQETSMKT 290

Query: 300 KTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWK 356
           K K+L+SLMEEEK      LV+M YDT+FY++SSD+AKETW+V G++D LSRSRSWK
Sbjct: 291 KKKDLRSLMEEEKM----ELVLMRYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 343

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218227|ref|NP_177935.1| uncharacterized protein [Arabidopsis thaliana] gi|12324251|gb|AAG52098.1|AC012680_9 unknown protein; 26643-27671 [Arabidopsis thaliana] gi|53828519|gb|AAU94369.1| At1g78110 [Arabidopsis thaliana] gi|55167926|gb|AAV43795.1| At1g78110 [Arabidopsis thaliana] gi|110740293|dbj|BAF02043.1| hypothetical protein [Arabidopsis thaliana] gi|332197947|gb|AEE36068.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  295 bits (754), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 187/355 (52%), Positives = 238/355 (67%), Gaps = 41/355 (11%)

Query: 12  ADLLVCFPSRAHLTLMPKPLCSPARPAEANKRINHQHHSQSQHQHPHHHHQHHLKKLNIK 71
           ADLLVCFPSR HL L PKP+CSP+RP+++           S ++ PHH  Q  L KL+  
Sbjct: 18  ADLLVCFPSRTHLALTPKPICSPSRPSDS-----------STNRRPHHRRQ--LSKLSGG 64

Query: 72  GAGHA-SPLMWAKTKPT----GPEIAEPTSPKVTCAGQIKVRPK--ANSCKSWQSVMEEI 124
           G G   SP++WAK   +    G EIAEPTSPKVTCAGQIKVRP       K+WQSVMEEI
Sbjct: 65  GGGGHGSPVLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEI 124

Query: 125 ERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDDEDDE 184
           ERIH+NR++ K          GLKK+VM FLTCL+NI+FDFRCFG F  AD+T+DD+++E
Sbjct: 125 ERIHDNRSQSK--------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEE 176

Query: 185 DEDQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVED--S 242
           D+D   E             ++ +S+TVFSKWFMVLQE QNN    +   +     D   
Sbjct: 177 DDDDDEEEEV------VEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLED 230

Query: 243 SAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEEEEEEVTQVK-KT 301
           +   PA PPPNALLLMRCRSAPAKS  E++   K E++K ++  EE+E E++ T +K K 
Sbjct: 231 TETEPAVPPPNALLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKK 290

Query: 302 KNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWK 356
           K+L+SLMEEEK      LV+M YDT+FY++SSD+AKETW+V G++D LSRSRSWK
Sbjct: 291 KDLRSLMEEEKME----LVLMRYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 341

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449510475|ref|XP_004163677.1| PREDICTED: uncharacterized LOC101215043 [Cucumis sativus]

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/265 (52%), Positives = 180/265 (67%), Gaps = 32/265 (12%)

Query: 5   EAKGAPPADLLVCFPSRAHLTLMPKPLCSPARPAEANK-RINHQHHSQSQHQHPHHHHQH 63
           ++KG P ADLLVCFPSR+HL LMP PLCSPAR ++++K R++++ +             H
Sbjct: 7   KSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRY-------------H 53

Query: 64  HLKKLNIKGAGHASPLMWAKTKPTGPEIAEPTSPKVTCAGQIKVRPKANSCKSWQSVMEE 123
             +K         SP++WAK K  G EI+EP+SPKVTCAGQIK+RPK +  KSWQSVMEE
Sbjct: 54  RRRK------SAESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNS--KSWQSVMEE 105

Query: 124 IERIHNNRNKHKNKRPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDDEDD 183
           IERIHN R   + +  +W ES G KK++MQFLTCL+ IRFDFRCF AFP  D TT++E++
Sbjct: 106 IERIHNRRKLRRRRF-NWIESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEE 164

Query: 184 EDEDQYHES--NHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVED 241
           E+E++  E   N +G+E      +  SSRT FSKWFMVLQEN +N   ++   R    +D
Sbjct: 165 EEEEEEEEEEKNQVGIE------ENESSRTAFSKWFMVLQENGSNELKRDSNSRCCE-DD 217

Query: 242 SSAAAPAAPPPNALLLMRCRSAPAK 266
            S  A  APP NALLLMRC+SAPA+
Sbjct: 218 ESIEATMAPPRNALLLMRCKSAPAR 242

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|62321237|dbj|BAD94415.1| hypothetical protein [Arabidopsis thaliana]

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 151/274 (55%), Positives = 191/274 (69%), Gaps = 23/274 (8%)

Query: 88  GPEIAEPTSPKVTCAGQIKVRPK--ANSCKSWQSVMEEIERIHNNRNKHKNKRPSWAESI 145
           G EIAEPTSPKVTCAGQIKVRP       K+WQSVMEEIERIH+NR++ K          
Sbjct: 3   GDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIHDNRSQSK--------FF 54

Query: 146 GLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTDDEDDEDEDQYHESNHLGVEGSDGNTD 205
           GLKK+VM FLTCL+NI+FDFRCFG F  AD+T+DD+++ED+D   E             +
Sbjct: 55  GLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDDDDDEEEEV------VEGEE 108

Query: 206 QASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVED--SSAAAPAAPPPNALLLMRCRSA 263
           + +S+TVFSKWFMVLQE QNN    +   +     D   +   PA PPPNALLLMRCRSA
Sbjct: 109 EENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEPAVPPPNALLLMRCRSA 168

Query: 264 PAKSRFEDKAAEKEEEDKEDDDHEEEEEEEEVTQVK-KTKNLKSLMEEEKRNNKENLVVM 322
           PAKS  E++   K E++K ++  EE+E E++ T +K K K+L+SLMEEEK      LV+M
Sbjct: 169 PAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKKKDLRSLMEEEKME----LVLM 224

Query: 323 AYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWK 356
            YDT+FY++SSD+AKETW+V G++D LSRSRSWK
Sbjct: 225 RYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 258

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	357
TAIR|locus:2194729	342	AT1G78110 "AT1G78110" [Arabido	0.739	0.771	0.457	2.6e-54
TAIR|locus:2015041	314	AT1G22230 [Arabidopsis thalian	0.422	0.480	0.416	4.5e-51

TAIR|locus:2194729 AT1G78110 "AT1G78110" [Arabidopsis thaliana (taxid:3702)]

 Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
 Identities = 136/297 (45%), Positives = 168/297 (56%)

Query:    72 GAGHASPLMWAKTKPT----GPEIAEPTSPKVTCAGQIKVRPK--ANSCKSWQSVMEEIE 125
             G GH SP++WAK   +    G EIAEPTSPKVTCAGQIKVRP       K+WQSVMEEIE
Sbjct:    66 GGGHGSPVLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIE 125

Query:   126 RIXXXXXXXXXXXPSWAESIGLKKEVMQFLTCLKNIRFDFRCFGAFPRADITTXXXXXXX 185
             RI            S ++  GLKK+VM FLTCL+NI+FDFRCFG F  AD+T+       
Sbjct:   126 RIHDNR--------SQSKFFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEED 177

Query:   186 XXQYHESNHLGVEGSDGNTDQASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVEDSSXX 245
                  E     VEG +    + +S+TVFSKWFMVLQE QNN   K++ + +   ++    
Sbjct:   178 DDDDEEEEV--VEGEE----EENSKTVFSKWFMVLQEEQNN---KDDDKNNNKCDEKRDL 228

Query:   246 XXXXXXXX-----XXXXMRCRSAPAKSRFXXXXXXXXXXXXXXXXXXXXXXXXXVTQVK- 299
                              MRCRSAPAKS                            T +K 
Sbjct:   229 EDTETEPAVPPPNALLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKT 288

Query:   300 KTKNLKSLMEEEKRNNKENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWK 356
             K K+L+SLMEEEK      LV+M YDT+FY++SSD+AKETW+V G++D LSRSRSWK
Sbjct:   289 KKKDLRSLMEEEKME----LVLMRYDTEFYRLSSDIAKETWVVGGIQDPLSRSRSWK 341

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2015041 AT1G22230 [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 4.5e-51, Sum P(3) = 4.5e-51
 Identities = 67/161 (41%), Positives = 83/161 (51%)

Query:   198 EGSDGNTDQ-ASSRTVFSKWFMVLQENQNNCYYKEEKERSGSVEDSSXXXXXXXXXXXXX 256
             E  D   D+  SS TVFSKW MVL E QNN     E+   G     S             
Sbjct:   163 EEEDEEEDEDESSGTVFSKWLMVLHEKQNN-----EECVDGKENVFSDVETAVPPPNALL 217

Query:   257 XMRCRSAPAKSRFXXXXXXXXXXXXXXXXXXXXXXXXXVTQVKKTKNLKSLMEEEKRNNK 316
              MRCRSAP K+ +                           +V   K+L+SLMEEEK   K
Sbjct:   218 LMRCRSAPVKN-WSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEK---K 273

Query:   317 ENLVVMAYDTDFYKISSDVAKETWIVDGMKDLLSRSRSWKR 357
              NLVVM YDT++YK+S+D+AKETW+V G++D L RSRSWK+
Sbjct:   274 MNLVVMNYDTNYYKLSNDIAKETWVVGGIQDPLFRSRSWKK 314

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	357
pfam00183	529	pfam00183, HSP90, Hsp90 protein	9e-04
PRK06402	106	PRK06402, rpl12p, 50S ribosomal protein L12P; Revi	0.002
pfam03066	146	pfam03066, Nucleoplasmin, Nucleoplasmin	0.002

>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein

 Score = 40.9 bits (96), Expect = 9e-04
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 270 EDKAAEKEEEDKEDDDHEEEEEEEEVTQVKKTKNLKSLMEEEKRNNK 316
           E +  ++EEE   D + E +EEEE+  + KKTK +K    E +  NK
Sbjct: 43  EKEEKKEEEEKTTDKEEEVDEEEEKEEKKKKTKKVKETTTEWELLNK 89

Length = 529

>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 10/52 (19%)

Query: 241 DSSAAAPAAPPPNALLLMRCRSAPAKSRFEDKAAEKEEEDKEDDDHEEEEEE 292
             +AAAP A             A A +     A EK+EE++E+++ EE EEE
Sbjct: 55  KKAAAAPVAAAA----------AAAAAAAAAAAEEKKEEEEEEEEKEESEEE 96

Length = 106

>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)

Query: 269 FEDKAAEKEEEDKEDDDHEEEEEEEEVTQVKKTK 302
            +D   ++EEED E+DD +E+E EEE + VKK K
Sbjct: 114 SDDDEEDEEEEDDEEDD-DEDESEEEESPVKKVK 146

Nucleoplasmins are also known as chromatin decondensation proteins. They bind to core histones and transfer DNA to them in a reaction that requires ATP. This is thought to play a role in the assembly of regular nucleosomal arrays. Length = 146

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	357
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.2 bits (137), Expect = 4e-09
 Identities = 38/277 (13%), Positives = 86/277 (31%), Gaps = 76/277 (27%)

Query: 113 SCKSWQSVMEEIERIHNNRNKHKNKRPSWAESIGLKKEVMQ-----------FLTCL--- 158
           +C S ++V+E ++++    + +   R   + +I L+   +Q           +  CL   
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 159 KNIR-------FDFRCFGAFPRADITTDDEDDEDEDQYHESNHLGVEGSDGNTDQASSRT 211
            N++       F+  C     +  +TT  +   D      + H+ ++           ++
Sbjct: 251 LNVQNAKAWNAFNLSC-----KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 212 VFSKWFMVLQENQNNCYYKEEKERSGSVEDSSAAAPAAPPPNALLLMRCRSAP-AKSRFE 270
           +  K+         +C            +D         P          + P   S   
Sbjct: 306 LLLKYL--------DC----------RPQDL--------PREV-----LTTNPRRLSII- 333

Query: 271 DKAAEKEEEDKEDDDHEEEEEEEEVTQVKKTKNLKSLMEEEKRNNKENLVVMAYDTDFYK 330
              AE   +     D+ +    +++T + ++  L  L   E R   + L V         
Sbjct: 334 ---AESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFDRLSVFPPSA---H 386

Query: 331 ISSDVAKETW-------IVDGMKDLLSRS---RSWKR 357
           I + +    W       ++  +  L   S   +  K 
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00