Citrus Sinensis ID: 040912

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEcccEEEEEEEcccccHHHHHHHHHHHHHHHccccccccEEEcccHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccEEEEEEEcHcccHHHHHHHHHHHHHHcccccccccEccccHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MGIQLMGFAHAKQKLQRTLSAKIRMAVAnntnnvpkghiAIYVGEGYRKRFVIPisylnhplFQDLLNMAEeefgfdhpmggltipcseEYFVSLTSTLNCS
Flexible Loop (DISEMBL)
MGIQLMGFAHAKQKLQRTLSAKIRMAvanntnnvpkghIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS
Low Complexity Region (SEG)
MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS
Disordered region (IsUnstruct)
****************RTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTS*****
Disordered Region (DISOPRED)
*GIQ***FAHA**************************HIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNC*
Disordered Region (DISEMBL)
MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS
Disordered Region (DISPRO)
*GIQLMGFAHAKQKLQRTLSAKI*******TNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
P32295	92	Indole-3-acetic acid-indu	N/A	no	0.882	0.978	0.56	5e-24
P33081	82	Auxin-induced protein 15A	no	no	0.705	0.878	0.671	1e-23
P33082	82	Auxin-induced protein X15	no	no	0.705	0.878	0.671	2e-23
P33080	92	Auxin-induced protein X10	no	no	0.705	0.782	0.630	1e-22
P33079	93	Auxin-induced protein 10A	no	no	0.705	0.774	0.630	9e-22
P33083	90	Auxin-induced protein 6B	no	no	0.882	1.0	0.52	2e-20

>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1

 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/100 (56%), Positives = 73/100 (73%), Gaps = 10/100 (10%)

Query: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60
           MG +L G       +++TLSA  R   ++   + PKG++A+YVGE   KRFVIP+S+LN 
Sbjct: 1   MGFRLPG-------IRKTLSA--RNEASSKVLDAPKGYLAVYVGENM-KRFVIPVSHLNQ 50

Query: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100
           PLFQDLL+ AEEEFG+DHPMGGLTIPCSE+ F  +TS L+
Sbjct: 51  PLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

Vigna radiata var. radiata (taxid: 3916)

>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 28  ANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPC 87
           A+   + PKG++A+YVGE   KRFVIP+SYLN P FQDLL+ AEEEFG+DHPMGGLTIPC
Sbjct: 11  ASKAADAPKGYLAVYVGEKL-KRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 69

Query: 88  SEEYFVSLTSTLN 100
           SE+ F  +TS LN
Sbjct: 70  SEDVFQCITSCLN 82

Glycine max (taxid: 3847)

>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1

 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/73 (67%), Positives = 58/73 (79%), Gaps = 1/73 (1%)

Query: 28  ANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPC 87
           A+N  + PKG++A+YVGE   KRFVIP+SY+N P FQDLL  AEEEFG+DHPMGGLTIPC
Sbjct: 11  ASNAVDAPKGYLAVYVGEKM-KRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPC 69

Query: 88  SEEYFVSLTSTLN 100
           SEE F  +T  LN
Sbjct: 70  SEEVFQRITCCLN 82

Glycine max (taxid: 3847)

>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 60/73 (82%), Gaps = 1/73 (1%)

Query: 28  ANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPC 87
           ++ +  VPKG++ +YVG+  R RF+IP+SYLN P FQDLLN AEEEFG+DHPMGGLTIPC
Sbjct: 19  SSKSVEVPKGYLVVYVGDKMR-RFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPC 77

Query: 88  SEEYFVSLTSTLN 100
            E+ F+++TS LN
Sbjct: 78  KEDEFLTVTSHLN 90

Glycine max (taxid: 3847)

>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1

 Score =  102 bits (253), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 46/73 (63%), Positives = 59/73 (80%), Gaps = 1/73 (1%)

Query: 28  ANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPC 87
           A+   +VPKG+ A+YVG+  R RF IP+SYLN P FQ+LL+ AEEEFG+DHPMGGLTIPC
Sbjct: 20  ASKRVDVPKGYAAVYVGDKMR-RFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPC 78

Query: 88  SEEYFVSLTSTLN 100
            EE F+++T+ LN
Sbjct: 79  KEEEFLNVTAHLN 91

Glycine max (taxid: 3847)

>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 64/100 (64%), Gaps = 10/100 (10%)

Query: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60
           MG +L G   A     +  S  +         +V KG++A+YVGE  R RFVIP+SYLN 
Sbjct: 1   MGFRLPGIRKASFSANQASSKAV---------DVEKGYLAVYVGEKMR-RFVIPVSYLNK 50

Query: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100
           P FQDLL+ AEEEFG+ HP GGLTIPCSE+ F  +TS LN
Sbjct: 51  PSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90

Glycine max (taxid: 3847)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
449510404	102	PREDICTED: auxin-induced protein 15A-lik	1.0	1.0	0.745	7e-40
225427870	100	PREDICTED: indole-3-acetic acid-induced	0.960	0.98	0.757	3e-38
15236188	104	SAUR-like auxin-responsive protein [Arab	1.0	0.980	0.740	4e-38
297802486	104	auxin-responsive family protein [Arabido	1.0	0.980	0.730	1e-37
449454337	128	PREDICTED: indole-3-acetic acid-induced	0.970	0.773	0.727	3e-37
224078010	101	SAUR family protein [Populus trichocarpa	0.882	0.891	0.815	2e-36
356531553	99	PREDICTED: indole-3-acetic acid-induced	0.941	0.969	0.717	8e-35
351725859	99	uncharacterized protein LOC100500377 [Gl	0.941	0.969	0.707	2e-34
388499362	99	unknown [Lotus japonicus]	0.941	0.969	0.696	3e-33
357473755	101	Auxin-induced protein 6B [Medicago trunc	0.921	0.930	0.690	4e-33

>gi|449510404|ref|XP_004163654.1| PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]

 Score =  167 bits (423), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 76/102 (74%), Positives = 86/102 (84%)

Query: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60
           MGI L G A+AKQKLQRT S K  +  A  TNNVPKGH A+YVGE  +KRFV+PI YLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 61  PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102
           PLF+DLLN+AEEEFGFDHPMGGLTIPC+E+YF+SLTS LNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427870|ref|XP_002272387.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like isoform 1 [Vitis vinifera]

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/99 (75%), Positives = 87/99 (87%), Gaps = 1/99 (1%)

Query: 4   QLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLF 63
           ++MG  HAKQKLQRTLS++I  A++  T NVPKGH A+YVGE  +KRFVIPISYLNHPLF
Sbjct: 3   RMMGITHAKQKLQRTLSSRITGAISA-TANVPKGHFAVYVGESQKKRFVIPISYLNHPLF 61

Query: 64  QDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102
           QDLL+ AEEEFGFDHPMGGLTIPCSE+YF+SLTS L+CS
Sbjct: 62  QDLLHRAEEEFGFDHPMGGLTIPCSEDYFISLTSHLSCS 100

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236188|ref|NP_195203.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana] gi|5123694|emb|CAB45438.1| putative protein [Arabidopsis thaliana] gi|7270428|emb|CAB80194.1| putative protein [Arabidopsis thaliana] gi|30793863|gb|AAP40384.1| unknown protein [Arabidopsis thaliana] gi|30794070|gb|AAP40479.1| unknown protein [Arabidopsis thaliana] gi|110738876|dbj|BAF01360.1| hypothetical protein [Arabidopsis thaliana] gi|332661021|gb|AEE86421.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 90/104 (86%), Gaps = 2/104 (1%)

Query: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANN-TNNVPKGHIAIYVGEGY-RKRFVIPISYL 58
           MGIQL+G + AKQKLQR+LSA+I   +A + TNNVPKGH+A+YVGE Y RKRFVIPISYL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 59  NHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102
           NHPLFQ LLN+AEEEFGFDHPMGGLTIPC+E+YF +L S L+ S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802486|ref|XP_002869127.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata] gi|297314963|gb|EFH45386.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/104 (73%), Positives = 90/104 (86%), Gaps = 2/104 (1%)

Query: 1   MGIQLMGFAHAKQKLQRTLSAKIRMAVANN-TNNVPKGHIAIYVGEGYR-KRFVIPISYL 58
           MGIQL+G + AKQKLQR+LSA+I   +A + TNNVPKGH+A+YVGE Y+ KRFVIPISYL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYQMKRFVIPISYL 60

Query: 59  NHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102
           NHPLFQ LLN+AEEEFGFDHPMGGLTIPC+E+YF +L S L+ S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454337|ref|XP_004144912.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Cucumis sativus]

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/99 (72%), Positives = 83/99 (83%)

Query: 1  MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60
          MGI L G A+AKQKLQRT S K  +  A  TNNVPKGH A+YVGE  +KRFV+PI YLNH
Sbjct: 1  MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 61 PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTL 99
          PLF+DLLN+AEEEFGFDHPMGGLTIPC+E+YF+SLTS +
Sbjct: 61 PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSKV 99

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078010|ref|XP_002305474.1| SAUR family protein [Populus trichocarpa] gi|222848438|gb|EEE85985.1| SAUR family protein [Populus trichocarpa]

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/92 (81%), Positives = 81/92 (88%), Gaps = 2/92 (2%)

Query: 1  MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNH 60
          MGIQLMG  HAKQKLQR+LSAKI   +A  T+NVP+GHIA+YVGEGYRKR VIPI+YLNH
Sbjct: 1  MGIQLMGITHAKQKLQRSLSAKIAGVLA--TSNVPRGHIAVYVGEGYRKRCVIPIAYLNH 58

Query: 61 PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYF 92
          PLFQ LLN AEEEFGFDHPMGGLTIPCSEE F
Sbjct: 59 PLFQGLLNRAEEEFGFDHPMGGLTIPCSEECF 90

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531553|ref|XP_003534342.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Glycine max]

 Score =  150 bits (380), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/99 (71%), Positives = 87/99 (87%), Gaps = 3/99 (3%)

Query: 2   GIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHP 61
           G + +G AHAKQKLQRTLS +I+MA A    +VPKGH+A+YVGE + KRFVIPISYL+HP
Sbjct: 4   GNRFVGIAHAKQKLQRTLSQRIKMASA--VADVPKGHLAVYVGENH-KRFVIPISYLSHP 60

Query: 62  LFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100
           LF+DLL+ AEEEFGF+HPMGGLTIPC+E+YF+SLTS+LN
Sbjct: 61  LFRDLLDWAEEEFGFNHPMGGLTIPCTEDYFISLTSSLN 99

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725859|ref|NP_001237107.1| uncharacterized protein LOC100500377 [Glycine max] gi|255630163|gb|ACU15435.1| unknown [Glycine max]

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 87/99 (87%), Gaps = 3/99 (3%)

Query: 2   GIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHP 61
           G + +G AHAKQKLQRTLS +I++A A    +VPKGH+A+YVGE + KRFVIPISYL+HP
Sbjct: 4   GNRFVGIAHAKQKLQRTLSQRIKLASA--VADVPKGHLAVYVGENH-KRFVIPISYLSHP 60

Query: 62  LFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100
           LF+DLL+ AEEEFGF+HPMGGLTIPC+E+YF+SLTS+LN
Sbjct: 61  LFRDLLDWAEEEFGFNHPMGGLTIPCTEDYFISLTSSLN 99

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499362|gb|AFK37747.1| unknown [Lotus japonicus]

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/99 (69%), Positives = 85/99 (85%), Gaps = 3/99 (3%)

Query: 2   GIQLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHP 61
           G + +G  HAKQKLQRTLS +I+MA A   + VPKGH+A+YVG+ + KRFVIPISYL+HP
Sbjct: 4   GNRFVGIVHAKQKLQRTLSQRIKMASA--VSGVPKGHLAVYVGQEH-KRFVIPISYLSHP 60

Query: 62  LFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100
            F+DLL+ AEEEFGF+HPMGGLTIPCSEEYF++LTS+LN
Sbjct: 61  SFRDLLDWAEEEFGFNHPMGGLTIPCSEEYFINLTSSLN 99

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473755|ref|XP_003607162.1| Auxin-induced protein 6B [Medicago truncatula] gi|217071604|gb|ACJ84162.1| unknown [Medicago truncatula] gi|355508217|gb|AES89359.1| Auxin-induced protein 6B [Medicago truncatula] gi|388495328|gb|AFK35730.1| unknown [Medicago truncatula]

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/97 (69%), Positives = 84/97 (86%), Gaps = 3/97 (3%)

Query: 4   QLMGFAHAKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLF 63
           + +G   AKQKLQRTLS +IRMA  ++  +VPKGH+A+YVG  + KRFVIPISYL+HPLF
Sbjct: 7   RFVGIVQAKQKLQRTLSQRIRMA--SSVGDVPKGHLAVYVGNDH-KRFVIPISYLSHPLF 63

Query: 64  QDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100
           +DLL+ AEEEFGF+HPMGGLTIPC+E+YF+SLTS+LN
Sbjct: 64  KDLLDWAEEEFGFNHPMGGLTIPCTEDYFISLTSSLN 100

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
TAIR|locus:2116860	104	AT4G34770 [Arabidopsis thalian	1.0	0.980	0.740	4.9e-37
TAIR|locus:2141772	99	AT4G38840 "AT4G38840" [Arabido	0.960	0.989	0.524	6.8e-24
TAIR|locus:2047007	98	AT2G21210 "AT2G21210" [Arabido	0.872	0.908	0.553	8.7e-24
TAIR|locus:2116885	94	AT4G34800 "AT4G34800" [Arabido	0.833	0.904	0.566	7.8e-23
TAIR|locus:2116895	105	AT4G34810 "AT4G34810" [Arabido	0.960	0.933	0.5	1.3e-22
TAIR|locus:2161518	90	SAUR23 "AT5G18060" [Arabidopsi	0.803	0.911	0.548	3.9e-21
TAIR|locus:2172299	90	SAUR24 "AT5G18080" [Arabidopsi	0.637	0.722	0.646	4.9e-21
TAIR|locus:2116875	108	AT4G34790 "AT4G34790" [Arabido	0.960	0.907	0.519	6.3e-21
TAIR|locus:2161558	88	AT5G18030 "AT5G18030" [Arabido	0.833	0.965	0.517	6.3e-21
TAIR|locus:2161543	91	SAUR20 "AT5G18020" [Arabidopsi	0.617	0.692	0.666	8e-21

TAIR|locus:2116860 AT4G34770 [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 77/104 (74%), Positives = 90/104 (86%)

Query:     1 MGIQLMGFAHAKQKLQRTLSAKIRMAVANN-TNNVPKGHIAIYVGEGY-RKRFVIPISYL 58
             MGIQL+G + AKQKLQR+LSA+I   +A + TNNVPKGH+A+YVGE Y RKRFVIPISYL
Sbjct:     1 MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query:    59 NHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102
             NHPLFQ LLN+AEEEFGFDHPMGGLTIPC+E+YF +L S L+ S
Sbjct:    61 NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2141772 AT4G38840 "AT4G38840" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 53/101 (52%), Positives = 74/101 (73%)

Query:     1 MGIQLMGFAHAKQKLQRTLSAKIRMAVANNTN-NVPKGHIAIYVGEGYRKRFVIPISYLN 59
             M I++     + +++ R   AK+  + +++++ +VPKG++A+YVGE   KRFV+P+SYL+
Sbjct:     1 MAIRIPRVLQSSKQILR--QAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLD 58

Query:    60 HPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLN 100
              P FQDLL  AEEEFGFDHPMGGLTIPCSEE F+ L S  N
Sbjct:    59 QPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009409 "response to cold" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=RCA

TAIR|locus:2047007 AT2G21210 "AT2G21210" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 52/94 (55%), Positives = 73/94 (77%)

Query:    14 KLQRTL--SAKIRMAVANNTNNV--PKGHIAIYVGEGYRKR-FVIPISYLNHPLFQDLLN 68
             ++ R L  S ++  ++++++NNV  PKGH+A+YVGE  +KR FV+P++YL+HP FQ LL 
Sbjct:     4 RISRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLR 63

Query:    69 MAEEEFGFDHPMGGLTIPCSEEYFVSLTSTLNCS 102
              AEEEFGFDHPMGGLTIPC+E+ F+ L S L+ S
Sbjct:    64 KAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

TAIR|locus:2116885 AT4G34800 "AT4G34800" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 51/90 (56%), Positives = 65/90 (72%)

Query:    14 KLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGY--RKRFVIPISYLNHPLFQDLLNMAE 71
             +L R +++K         + VPKGH+A+YVGE    +KRFV+PISYLNHP FQ LL+ AE
Sbjct:     4 RLSRVINSKQSQ---KQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQGLLSRAE 60

Query:    72 EEFGFDHPMGGLTIPCSEEYFVSLTSTLNC 101
             EEFGF+HP+GGLTIPC EE FV L ++  C
Sbjct:    61 EEFGFNHPIGGLTIPCREETFVGLLNSYGC 90

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2116895 AT4G34810 "AT4G34810" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 51/102 (50%), Positives = 73/102 (71%)

Query:     1 MGIQLMGFAHA-KQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGY---RKRFVIPIS 56
             MG+     ++A KQ L+    A      ++++++VPKGH+A+YVGE     +KRFV+PIS
Sbjct:     1 MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query:    57 YLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTST 98
             +LNHP F++ L+ AEEEFGF+HPMGGLTIPC EE F+ L ++
Sbjct:    61 FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIAS 102

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161518 SAUR23 "AT5G18060" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 45/82 (54%), Positives = 62/82 (75%)

Query:    19 LSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDH 78
             ++ KI    A   +  PKG +A+YVGE  +KR+++P+SYLN P FQ LL+ +EEEFGFDH
Sbjct:     9 VAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDH 68

Query:    79 PMGGLTIPCSEEYFVSLTSTLN 100
             PMGGLTIPC E+ F+++TS L+
Sbjct:    69 PMGGLTIPCPEDTFINVTSRLH 90

GO:0003674 "molecular_function" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2172299 SAUR24 "AT5G18080" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 42/65 (64%), Positives = 55/65 (84%)

Query:    35 PKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVS 94
             PKG +A+YVGE  +KR+++P+SYLN P FQ LL+ +EEEFGFDHPMGGLTIPC E+ F++
Sbjct:    25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query:    95 LTSTL 99
             +TS L
Sbjct:    85 VTSRL 89

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2116875 AT4G34790 "AT4G34790" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 54/104 (51%), Positives = 68/104 (65%)

Query:     1 MGIQLMGFAHAKQ--KLQ--RTLSAKIRMAVANNTNN-VPKGHIAIYVGEGY-RKRFVIP 54
             MG+      +AKQ  K Q  R  +     +    T+  VPKGH+A+YVGE   +KRFV+P
Sbjct:     1 MGLMRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVVP 60

Query:    55 ISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTST 98
             ISYLNHPLF++ LN AEEE GF H MGGLTIPC EE F+ L ++
Sbjct:    61 ISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITS 104

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161558 AT5G18030 "AT5G18030" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 44/85 (51%), Positives = 63/85 (74%)

Query:    15 LQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEF 74
             L R+L    ++   +  +  PKG +A+YVGE  +KR+++P+SYL+ P FQ LL+ +EEEF
Sbjct:     3 LVRSLLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEF 62

Query:    75 GFDHPMGGLTIPCSEEYFVSLTSTL 99
             GFDHPMGGLTIPC E+ F+++TS L
Sbjct:    63 GFDHPMGGLTIPCPEDTFINVTSRL 87

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

TAIR|locus:2161543 SAUR20 "AT5G18020" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 42/63 (66%), Positives = 54/63 (85%)

Query:    35 PKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVS 94
             PKG +A+YVGE  +KR+++PISYLN P FQ LL+ +EEEFGFDHPMGGLTIPC E+ F++
Sbjct:    25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query:    95 LTS 97
             +TS
Sbjct:    85 VTS 87

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009733 "response to auxin stimulus" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P32295	ARG7_VIGRR	No assigned EC number	0.56	0.8823	0.9782	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	102
pfam02519	99	pfam02519, Auxin_inducible, Auxin responsive prote	2e-38
PLN03220	105	PLN03220, PLN03220, uncharacterized protein; Provi	1e-30
PLN03090	104	PLN03090, PLN03090, auxin-responsive family protei	4e-30
PLN03219	108	PLN03219, PLN03219, uncharacterized protein; Provi	3e-27

>gnl|CDD|217082 pfam02519, Auxin_inducible, Auxin responsive protein

 Score =  123 bits (311), Expect = 2e-38
 Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 11 AKQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMA 70
           K  L          +  +++ +VPKGH A+YVGE   +RFV+PISYLNHPLFQ+LL+ A
Sbjct: 12 KKWILSAASGRSRGSSSKSSSADVPKGHFAVYVGEE-TRRFVVPISYLNHPLFQELLDRA 70

Query: 71 EEEFGFDHPMGGLTIPCSEEYFVSLTSTL 99
          EEEFGFD   GGLTIPC    F  L   L
Sbjct: 71 EEEFGFDQ-DGGLTIPCDVVVFEHLLWML 98

This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role. Length = 99

>gnl|CDD|178759 PLN03220, PLN03220, uncharacterized protein; Provisional

 Score =  104 bits (260), Expect = 1e-30
 Identities = 51/102 (50%), Positives = 73/102 (71%), Gaps = 4/102 (3%)

Query: 1   MGIQLMGFAHA-KQKLQRTLSAKIRMAVANNTNNVPKGHIAIYVGEGY---RKRFVIPIS 56
           MG+     ++A KQ L+    A      ++++++VPKGH+A+YVGE     +KRFV+PIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 57  YLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTST 98
           +LNHP F++ L+ AEEEFGF+HPMGGLTIPC EE F+ L ++
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIAS 102

Length = 105

>gnl|CDD|178639 PLN03090, PLN03090, auxin-responsive family protein; Provisional

 Score =  102 bits (257), Expect = 4e-30
 Identities = 43/68 (63%), Positives = 50/68 (73%), Gaps = 2/68 (2%)

Query: 32  NNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEY 91
            +VPKGH  +YVGE  R R+++PIS+L HP FQ LL  AEEEFGFDH M GLTIPC E  
Sbjct: 38  LDVPKGHFPVYVGEN-RSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDM-GLTIPCEEVV 95

Query: 92  FVSLTSTL 99
           F SLTS +
Sbjct: 96  FRSLTSMI 103

Length = 104

>gnl|CDD|178758 PLN03219, PLN03219, uncharacterized protein; Provisional

 Score = 95.6 bits (237), Expect = 3e-27
 Identities = 45/66 (68%), Positives = 54/66 (81%), Gaps = 1/66 (1%)

Query: 34  VPKGHIAIYVGEGY-RKRFVIPISYLNHPLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYF 92
           VPKGH+A+YVGE   +KRFV+PISYLNHPLF++ LN AEEE GF H MGGLTIPC EE F
Sbjct: 39  VPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESF 98

Query: 93  VSLTST 98
           + L ++
Sbjct: 99  LHLITS 104

Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
PLN03090	104	auxin-responsive family protein; Provisional	100.0
PLN03220	105	uncharacterized protein; Provisional	100.0
PF02519	100	Auxin_inducible: Auxin responsive protein; InterPr	100.0
PLN03219	108	uncharacterized protein; Provisional	100.0
PRK02899	197	adaptor protein; Provisional	84.09
PF02100	108	ODC_AZ: Ornithine decarboxylase antizyme; InterPro	80.5

>PLN03090 auxin-responsive family protein; Provisional

Probab=100.00  E-value=1.6e-41  Score=236.17  Aligned_cols=97  Identities=53%  Similarity=0.805  Sum_probs=86.7

Q ss_pred             Cccc----ccchHHHHHHHhhhhhHhhhhhh--ccCCCCCCCceEEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhhc
Q 040912            1 MGIQ----LMGFAHAKQKLQRTLSAKIRMAV--ANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEF   74 (102)
Q Consensus         1 m~~~----~~~~~~~k~~l~r~~s~~~~~~~--~~~~~~vpkG~~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEf   74 (102)
                      |||+    +..++++||+||||.|.+++++.  ...+.+||+||||||||+ +++||+||++|||||.|++||++|||||
T Consensus         1 m~~~k~~ki~~~~~~kq~l~r~~s~~~~~~~~~~~~~~~vpkG~~aVyVG~-~~~RfvVp~~~L~hP~F~~LL~~aeeEf   79 (104)
T PLN03090          1 MAIKKSNKLTQTAMLKQILKRCSSLGKKQGYDEDGLPLDVPKGHFPVYVGE-NRSRYIVPISFLTHPEFQSLLQQAEEEF   79 (104)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHhcccCCcccccCCCCCCCCcEEEEECC-CCEEEEEEHHHcCCHHHHHHHHHHHHHh
Confidence            7775    34578999999999999876532  346789999999999998 5999999999999999999999999999


Q ss_pred             CCCCCCCceeeeCcHHHHHHHHHhh
Q 040912           75 GFDHPMGGLTIPCSEEYFVSLTSTL   99 (102)
Q Consensus        75 G~~~~~G~L~IPC~~~~F~~vl~~l   99 (102)
                      ||+| +|+|+|||+++.|++++|+|
T Consensus        80 Gf~~-~G~L~IPC~~~~Fe~ll~~i  103 (104)
T PLN03090         80 GFDH-DMGLTIPCEEVVFRSLTSMI  103 (104)
T ss_pred             CCCC-CCcEEEeCCHHHHHHHHHHh
Confidence            9995 59999999999999999998

>PLN03220 uncharacterized protein; Provisional

Probab=100.00  E-value=2.3e-40  Score=230.53  Aligned_cols=97  Identities=52%  Similarity=0.949  Sum_probs=86.3

Q ss_pred             CcccccchH-HHHHHHhhhhhHhhhh-hhccCCCCCCCceEEEEeeCC---ceeEEEEeecccCcHHHHHHHHHHHhhcC
Q 040912            1 MGIQLMGFA-HAKQKLQRTLSAKIRM-AVANNTNNVPKGHIAIYVGEG---YRKRFVIPISYLNHPLFQDLLNMAEEEFG   75 (102)
Q Consensus         1 m~~~~~~~~-~~k~~l~r~~s~~~~~-~~~~~~~~vpkG~~aVyVG~~---e~kRfvVp~~~L~hP~F~~LL~~aeEEfG   75 (102)
                      ||++++.|+ +.||+|+|++ ++++. ++++.+.+|||||||||||++   |++||+||++|||||.|++||++||||||
T Consensus         1 ~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~VPkGh~aVyVGe~~~~e~kRFVVPv~yL~hP~F~~LL~~AeEEfG   79 (105)
T PLN03220          1 MGLSRFAISNATKQILKLNS-LANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFG   79 (105)
T ss_pred             CCcchhhhHHHHHHHHHHHh-hcccccccccccCCCCCCeEEEEECCCCCccceEEEEEHHHcCChHHHHHHHHHHHHhC
Confidence            899999999 5699999999 55443 235677899999999999973   58999999999999999999999999999


Q ss_pred             CCCCCCceeeeCcHHHHHHHHHh
Q 040912           76 FDHPMGGLTIPCSEEYFVSLTST   98 (102)
Q Consensus        76 ~~~~~G~L~IPC~~~~F~~vl~~   98 (102)
                      |+|++|+|+|||+++.|++++..
T Consensus        80 f~~~~G~L~IPCd~~~F~~ll~s  102 (105)
T PLN03220         80 FNHPMGGLTIPCREEVFLDLIAS  102 (105)
T ss_pred             CCCCCCCEEeeCCHHHHHHHHHh
Confidence            99767999999999999999874

>PF02519 Auxin_inducible: Auxin responsive protein; InterPro: IPR003676 This family consists of the protein products of a gene cluster that encodes a group of auxin-regulated RNAs (small auxin up RNAs, SAURs) []

Probab=100.00  E-value=3.6e-37  Score=212.05  Aligned_cols=98  Identities=51%  Similarity=0.821  Sum_probs=78.2

Q ss_pred             CcccccchHHHHHHHhhhhhHhhhhhh--ccCCCCCCCceEEEEeeCCceeEEEEeecccCcHHHHHHHHHHHhhcCCCC
Q 040912            1 MGIQLMGFAHAKQKLQRTLSAKIRMAV--ANNTNNVPKGHIAIYVGEGYRKRFVIPISYLNHPLFQDLLNMAEEEFGFDH   78 (102)
Q Consensus         1 m~~~~~~~~~~k~~l~r~~s~~~~~~~--~~~~~~vpkG~~aVyVG~~e~kRfvVp~~~L~hP~F~~LL~~aeEEfG~~~   78 (102)
                      |..++.++..+++..+++.+...+.+.  ++...++|+||||||||+ +++||+||++|||||+|++||++|||||||++
T Consensus         1 M~~~~k~~~~~~k~~~~~~~~~~~~~~~~~~~~~~vp~G~~~VyVG~-~~~Rfvvp~~~L~hp~f~~LL~~aeeEfG~~~   79 (100)
T PF02519_consen    1 MASRLKSLASAKKWQSRARSKSSSSSSSRSSSESDVPKGHFAVYVGE-ERRRFVVPVSYLNHPLFQELLEQAEEEFGFDQ   79 (100)
T ss_pred             CccHHHHHHHHHhhhhhhhhcccccccccccccCCCCCCeEEEEeCc-cceEEEechHHcCchhHHHHHHHHhhhcCcCC
Confidence            555666666555554444433222111  233488999999999998 69999999999999999999999999999996


Q ss_pred             CCCceeeeCcHHHHHHHHHhhh
Q 040912           79 PMGGLTIPCSEEYFVSLTSTLN  100 (102)
Q Consensus        79 ~~G~L~IPC~~~~F~~vl~~l~  100 (102)
                       +|+|+|||+++.|++++|+|+
T Consensus        80 -~G~l~iPC~~~~Fe~~l~~le  100 (100)
T PF02519_consen   80 -DGPLTIPCDVVLFEHLLWLLE  100 (100)
T ss_pred             -CCcEEeeCCHHHHHHHHHHhC
Confidence             699999999999999999985

Proteins from this ARG7 auxin responsive genes family have no identified functional role [].

>PLN03219 uncharacterized protein; Provisional

Probab=100.00  E-value=3.1e-36  Score=210.75  Aligned_cols=98  Identities=51%  Similarity=0.864  Sum_probs=76.9

Q ss_pred             CcccccchHHHHHHHhhhhhHhhhhhh-----ccCCCCCCCceEEEEeeCC-ceeEEEEeecccCcHHHHHHHHHHHhhc
Q 040912            1 MGIQLMGFAHAKQKLQRTLSAKIRMAV-----ANNTNNVPKGHIAIYVGEG-YRKRFVIPISYLNHPLFQDLLNMAEEEF   74 (102)
Q Consensus         1 m~~~~~~~~~~k~~l~r~~s~~~~~~~-----~~~~~~vpkG~~aVyVG~~-e~kRfvVp~~~L~hP~F~~LL~~aeEEf   74 (102)
                      ||+-..-+..+||+.|-.+-..+.+++     ++.+.+|||||||||||++ |++||+||++|||||+|++||++|||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vpkGh~aVYVG~~~E~kRFvVPi~yL~hP~F~~LL~~AeEEf   80 (108)
T PLN03219          1 MGLMRSMLPNAKQIFKSQSMRNKNGSSSPSSSTTTSGLVPKGHVAVYVGEQMEKKRFVVPISYLNHPLFREFLNRAEEEC   80 (108)
T ss_pred             CchHHHHHhhHHHHHHHHHHhcccCCCCCccCCCCCCCCCCCeEEEEECCCCCceEEEEEHHHcCChHHHHHHHHHHHHh
Confidence            444333344567776533322222211     3455789999999999983 6999999999999999999999999999


Q ss_pred             CCCCCCCceeeeCcHHHHHHHHHh
Q 040912           75 GFDHPMGGLTIPCSEEYFVSLTST   98 (102)
Q Consensus        75 G~~~~~G~L~IPC~~~~F~~vl~~   98 (102)
                      ||+|++|+|+|||+++.|+++++.
T Consensus        81 Gf~~~~G~L~IPCd~~~F~~ll~~  104 (108)
T PLN03219         81 GFHHSMGGLTIPCREESFLHLITS  104 (108)
T ss_pred             CCCCCCCCEEEeCCHHHHHHHHHh
Confidence            999777999999999999999986

>PRK02899 adaptor protein; Provisional

Probab=84.09  E-value=0.99  Score=34.21  Aligned_cols=24  Identities=33%  Similarity=0.785  Sum_probs=20.4

Q ss_pred             HHHHHHHHHHHhhcCCCCCCCceee
Q 040912           61 PLFQDLLNMAEEEFGFDHPMGGLTI   85 (102)
Q Consensus        61 P~F~~LL~~aeEEfG~~~~~G~L~I   85 (102)
                      -+|.++|++|..|+||. .+|||+|
T Consensus        39 ~lF~~mm~Ea~~e~~F~-~~~pl~~   62 (197)
T PRK02899         39 QLFRDMMQEANKELGFE-ADGPIAV   62 (197)
T ss_pred             HHHHHHHHHhhhccCcc-cCCeEEE
Confidence            35888899999999998 5699876

>PF02100 ODC_AZ: Ornithine decarboxylase antizyme; InterPro: IPR002993 Ornithine decarboxylase antizyme (ODC-AZ) [] binds to, and destabilises, ornithine decarboxylase (ODC), a key enzyme in polyamine synthesis

Probab=80.50  E-value=2.3  Score=29.43  Aligned_cols=51  Identities=35%  Similarity=0.401  Sum_probs=27.5

Q ss_pred             ceeEEE-EeecccCc---HHHHHHHHHHHhhcCCCCCCCceeeeCcHHHHHHHHHhh
Q 040912           47 YRKRFV-IPISYLNH---PLFQDLLNMAEEEFGFDHPMGGLTIPCSEEYFVSLTSTL   99 (102)
Q Consensus        47 e~kRfv-Vp~~~L~h---P~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l   99 (102)
                      ++.=|+ +|-..+.+   ..|.+||+.|||++|.++  -.+.++=+-.....++..+
T Consensus        23 ~~~L~V~ip~~~~~~~~K~~lvaLLElAee~L~c~~--vvic~~k~~~d~~~Llr~l   77 (108)
T PF02100_consen   23 ERTLFVFIPSSALGQGSKESLVALLELAEEKLGCSH--VVICLDKNRPDRASLLRTL   77 (108)
T ss_dssp             TTEEEEE-SS---SS--SHHHHHHHHHHHHHH------EEEEE---SS-HHHHHHHH
T ss_pred             CCEEEEEECCcccccccHHHHHHHHHHhcCcCCCCE--EEEEEECCchhHHHhhhhc
Confidence            355666 56554444   459999999999999874  5777776655566655543

ODC is then rapidly degraded. The expression of ODC-AZ requires programmed, ribosomal frameshifting which is modulated according to the cellular concentration of polyamines. High levels of polyamines induce a +1 ribosomal frameshift in the translation of mRNA for the antizyme leading to the expression of a full-length protein. At least two forms of ODC-AZ exist in mammals [] and the protein has been found in Drosophila (protein Gutfeeling).; GO: 0004857 enzyme inhibitor activity, 0008073 ornithine decarboxylase inhibitor activity; PDB: 1ZO0_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00