Citrus Sinensis ID: 041075

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
MQAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGFNSSTINWC
Secondary Structure (PSIPRED)
cccccccccccccccEEEccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEcccccHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHcccccccccccHHcccccHEEEEccccccccccccHHHHHHcccHHHEccccccHHHHHHHccHHHHHHHHHHHHHHHccccccEEEEEccccccccccHccccHHHHHHHHHHHHHHHccccccccEEcccccEEcccccccEEEEEEEccccccccEccc
Coil and Loop (DISEMBL)
mqaksnaskdafpsdistgsspaptyvpgsrlinlkpkiqegvtqsftyadhgqaSWVVGISStmwevpgnsplvdlfnsagrdmihvpmsFDFFRSIAsennylrfqdnslsgdapstdKAIEKEMQELAKIGERllkkpvsrpvyAMRRIIHSGLCSNSMILALVLStsgfnsstinwc
Flexible Loop (DISEMBL)
mqaksnaskdafpsdistgsspaptyVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIgerllkkpvsrpVYAMRRIIHSGLCSNSMILALVLstsgfnsstinwc
Low Complexity Region (SEG)
MQAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGFNSSTINWC
Disordered region (IsUnstruct)
******************************RLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRF***************************ERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGFN*******
Disordered Region (DISOPRED)
****SN*SKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGFNSSTINWC
Disordered Region (DISEMBL)
***********************PTYVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGF********
Disordered Region (DISPRO)
*****NASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGFNSSTINWC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLSTSGFNSSTINWC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
Q2MY50	387	Patatin-01 OS=Solanum tub	N/A	no	0.276	0.129	0.52	1e-08
Q2MY58	387	Patatin group A-3 OS=Sola	N/A	no	0.276	0.129	0.52	1e-08
Q2MY60	387	Patatin-02 OS=Solanum tub	N/A	no	0.276	0.129	0.52	1e-08
Q2MY59	387	Patatin group A-2 OS=Sola	N/A	no	0.276	0.129	0.52	1e-08
Q3YJT4	375	Patatin-1-Kuras 2 OS=Sola	N/A	no	0.276	0.133	0.52	1e-08
Q41487	386	Patatin-16 OS=Solanum tub	N/A	no	0.276	0.129	0.52	3e-08
Q3YJT5	387	Patatin-05 OS=Solanum tub	N/A	no	0.276	0.129	0.5	4e-08
Q2MY48	387	Patatin-03 OS=Solanum tub	N/A	no	0.276	0.129	0.5	4e-08
Q2MY38	387	Patatin-13 OS=Solanum tub	N/A	no	0.276	0.129	0.5	5e-08
Q2MY44	386	Patatin-07 OS=Solanum tub	N/A	no	0.276	0.129	0.5	5e-08

>sp|Q2MY50|PAT01_SOLTU Patatin-01 OS=Solanum tuberosum PE=2 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.
Solanum tuberosum (taxid: 4113)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q2MY58|PATA3_SOLTU Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY60|PAT02_SOLTU Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY59|PATA2_SOLTU Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ LA++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 357

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT4|PT1K2_SOLTU Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ LA++GE LLKKPVS+
Sbjct: 296 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSK 345

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q41487|PAT16_SOLTU Patatin-16 OS=Solanum tuberosum PE=2 SV=1

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N L+G     D A E  M+ LA++GE LLKKPVS+
Sbjct: 307 FQDLHSQNNYLRVQENPLTGTTTKADDASEANMELLAQVGENLLKKPVSK 356

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q3YJT5|PAT05_SOLTU Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ L ++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSK 357

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY48|PAT03_SOLTU Patatin-03 OS=Solanum tuberosum PE=2 SV=1

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ L ++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSK 357

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY38|PAT13_SOLTU Patatin-13 OS=Solanum tuberosum PE=2 SV=1

 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ L ++GE LLKKPVS+
Sbjct: 308 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGETLLKKPVSK 357

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q2MY44|PAT07_SOLTU Patatin-07 OS=Solanum tuberosum PE=2 SV=1

 Score = 57.4 bits (137), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+ + S+NNYLR Q+N+L+G     D A E  M+ L ++GE LLKKPVS+
Sbjct: 307 FQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSK 356

Probable lipolytic acyl hydrolase (LAH), an activity which is thought to be involved in the response of tubers to pathogens.

Solanum tuberosum (taxid: 4113)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
359480811	398	PREDICTED: patatin group A-3-like [Vitis	0.762	0.346	0.358	2e-17
255565132	404	Patatin precursor, putative [Ricinus com	0.773	0.346	0.341	5e-17
255565130	398	Patatin class 1 precursor, putative [Ric	0.773	0.351	0.333	6e-16
302142357	489	unnamed protein product [Vitis vinifera]	0.767	0.284	0.336	1e-15
296082436	832	unnamed protein product [Vitis vinifera]	0.779	0.169	0.341	2e-15
359492618	411	PREDICTED: patatin group A-3-like [Vitis	0.767	0.338	0.336	2e-15
147792846	400	hypothetical protein VITISV_008805 [Viti	0.767	0.347	0.336	2e-15
302142355	423	unnamed protein product [Vitis vinifera]	0.767	0.328	0.331	8e-15
359492616	406	PREDICTED: patatin group A-3-like [Vitis	0.767	0.342	0.331	1e-14
147861175	390	hypothetical protein VITISV_028107 [Viti	0.767	0.356	0.346	4e-14

>gi|359480811|ref|XP_002277358.2| PREDICTED: patatin group A-3-like [Vitis vinifera]

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 91/195 (46%), Gaps = 57/195 (29%)

Query: 3   AKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS------ 56
           A+ ++SKDA  SDI   +S APTY+P     N +    +G  + F   D G A+      
Sbjct: 166 AEMDSSKDALLSDICISTSSAPTYLPA---YNFRTHDSDGNEREFHLVDGGVAANNPALL 222

Query: 57  --------------------------WVV-----GIS----------STMWEV------P 69
                                     +VV     G S          +  W +       
Sbjct: 223 AMKPTGAVFPGGPEEHLASKALQHENYVVISLGTGTSKIEKKYNAKRAARWGILGWLYKE 282

Query: 70  GNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQE 129
           G+SPLVD F  A  DM+ + MS   FRSI  E+NYLR QD++LSGD  STDKA  K M+ 
Sbjct: 283 GHSPLVDAFTFASGDMVDLHMSL-IFRSIRCEHNYLRIQDDTLSGDTSSTDKATRKNMEA 341

Query: 130 LAKIGERLLKKPVSR 144
           L KIG+ LL+KPVSR
Sbjct: 342 LVKIGKELLQKPVSR 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565132|ref|XP_002523558.1| Patatin precursor, putative [Ricinus communis] gi|223537120|gb|EEF38753.1| Patatin precursor, putative [Ricinus communis]

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 94/196 (47%), Gaps = 56/196 (28%)

Query: 1   MQAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS---- 56
            +A+++ASK+A  SD+   +S APTY P     + + K  EG  + F   D G A+    
Sbjct: 164 FEAETDASKNALLSDVCISTSSAPTYFPA---YHFRTKDSEGNDREFHLVDGGIAANNPA 220

Query: 57  ---------------------------WVV-----GIS----------STMWEV------ 68
                                      +VV     G S          +  W +      
Sbjct: 221 LLAMKPTGIVFPGDPASLPAQTLHYGKYVVLSLGTGTSKVEKKYSAKMAAKWGILGWLYR 280

Query: 69  PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQ 128
            G+SPLVD F  A  DM+ + MS   FRSI  E+NYLR Q+++L GD  STDKA +K ++
Sbjct: 281 DGHSPLVDAFTYASGDMVDLHMSL-IFRSIRCEHNYLRIQNDTLRGDTSSTDKATKKNLE 339

Query: 129 ELAKIGERLLKKPVSR 144
           +L KIGE +L+KPVSR
Sbjct: 340 DLVKIGEDILQKPVSR 355

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565130|ref|XP_002523557.1| Patatin class 1 precursor, putative [Ricinus communis] gi|223537119|gb|EEF38752.1| Patatin class 1 precursor, putative [Ricinus communis]

 Score = 89.4 bits (220), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 89/195 (45%), Gaps = 55/195 (28%)

Query: 1   MQAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYAD--------- 51
            +A+ +ASKDA  SDI  G+S APTY P       + K  EG  + F   D         
Sbjct: 164 FEAEIDASKDALLSDICIGTSSAPTYFPA---YYFQTKDSEGNYREFHLVDGGITANNPA 220

Query: 52  ----------------------HGQASWVVGI--------------SSTMWEV------P 69
                                 H     V+ +              S+  W +       
Sbjct: 221 LLAMKPTGTVFPDPDTLPAQALHYGKYLVISLGTGTSKMHKKYSAKSAEKWGILSWIYKE 280

Query: 70  GNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQE 129
             SPL+D F +A  DM+ + MS   FRS   E+NYLR QD++LS ++ S DKA +K ++E
Sbjct: 281 RQSPLLDAFRNAIDDMVELHMSL-IFRSNKCEHNYLRIQDDTLSEESSSVDKATQKNLEE 339

Query: 130 LAKIGERLLKKPVSR 144
           L KIGER+L+KPVSR
Sbjct: 340 LVKIGERILQKPVSR 354

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142357|emb|CBI19560.3| unnamed protein product [Vitis vinifera]

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 87/196 (44%), Gaps = 57/196 (29%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS---WV 58
           + K +   DA  +DI  GSS APTY PG    N   + +EG TQ F   D G A+    +
Sbjct: 199 EVKRSPCLDAPLADICIGSSAAPTYFPGHYFKN---QDKEGKTQEFNLIDGGVAANNPAL 255

Query: 59  VGISSTMWEV-------------------------------------------------- 68
           V IS    +V                                                  
Sbjct: 256 VAISQVTKQVFDKNPDFFPIKPMDFGRFLVISIGTGSPKSEQKYNAKMASKWGVLGWLLH 315

Query: 69  PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQ 128
            G++PLVD+F  A  DM+   +S   F+++ SE+NYLR QD++L G   S D A E+ + 
Sbjct: 316 GGSTPLVDVFMQASADMVDFHISM-VFQALHSEDNYLRIQDDTLRGKDASVDVATEENLD 374

Query: 129 ELAKIGERLLKKPVSR 144
            L KIGERLLKKPVSR
Sbjct: 375 NLVKIGERLLKKPVSR 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082436|emb|CBI21441.3| unnamed protein product [Vitis vinifera]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 91/193 (47%), Gaps = 52/193 (26%)

Query: 3   AKSNASKDAFPSDISTGSSPAPTYVPGSR--------------------------LINLK 36
           A+ ++SKDA  SDI   +S APTY+P                             L+ +K
Sbjct: 181 AEMDSSKDALLSDICISTSSAPTYLPAYNFRTHDSDGNEREFHLVDGGVAANNPALLAMK 240

Query: 37  PK--------IQEGVTQSFTYADHGQASWVVGIS----------STMWEV------PGNS 72
           P          +   +++  + ++   S   G S          +  W +       G+S
Sbjct: 241 PTGAVFPGGPEEHLASKALQHENYVVISLGTGTSKIEKKYNAKRAARWGILGWLYKEGHS 300

Query: 73  PLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQ-DNSLSGDAPSTDKAIEKEMQELA 131
           PLVD F  A  DM+ + MS   FRSI  E+NYLR Q D++LSGD  STDKA  K M+ L 
Sbjct: 301 PLVDAFTFASGDMVDLHMSL-IFRSIRCEHNYLRIQQDDTLSGDTSSTDKATRKNMEALV 359

Query: 132 KIGERLLKKPVSR 144
           KIG+ LL+KPVSR
Sbjct: 360 KIGKELLQKPVSR 372

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492618|ref|XP_002282366.2| PREDICTED: patatin group A-3-like [Vitis vinifera]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 87/196 (44%), Gaps = 57/196 (29%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS---WV 58
           + K +   DA  +DI  GSS APTY PG    N   + +EG TQ F   D G A+    +
Sbjct: 173 EVKRSPCLDAPLADICIGSSAAPTYFPGHYFKN---QDKEGKTQEFNLIDGGVAANNPAL 229

Query: 59  VGISSTMWEV-------------------------------------------------- 68
           V IS    +V                                                  
Sbjct: 230 VAISQVTKQVFDKNPDFFPIKPMDFGRFLVISIGTGSPKSEQKYNAKMASKWGVLGWLLH 289

Query: 69  PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQ 128
            G++PLVD+F  A  DM+   +S   F+++ SE+NYLR QD++L G   S D A E+ + 
Sbjct: 290 GGSTPLVDVFMQASADMVDFHISM-VFQALHSEDNYLRIQDDTLRGKDASVDVATEENLD 348

Query: 129 ELAKIGERLLKKPVSR 144
            L KIGERLLKKPVSR
Sbjct: 349 NLVKIGERLLKKPVSR 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792846|emb|CAN68798.1| hypothetical protein VITISV_008805 [Vitis vinifera]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 87/196 (44%), Gaps = 57/196 (29%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS---WV 58
           + K +   DA  +DI  GSS APTY PG    N   + +EG TQ F   D G A+    +
Sbjct: 162 EVKRSPCLDAPLADICIGSSAAPTYFPGHYFKN---QDKEGKTQEFNLIDGGVAANNPAL 218

Query: 59  VGISSTMWEV-------------------------------------------------- 68
           V IS    +V                                                  
Sbjct: 219 VAISQVTKQVFDKNPDFFPIKPMDFGRFLVISIGTGSPKSEQKYNAKMASKWGVLGWLLH 278

Query: 69  PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQ 128
            G++PLVD+F  A  DM+   +S   F+++ SE+NYLR QD++L G   S D A E+ + 
Sbjct: 279 GGSTPLVDVFMQASADMVDFHISM-VFQALHSEDNYLRIQDDTLRGKDASVDVATEENLD 337

Query: 129 ELAKIGERLLKKPVSR 144
            L KIGERLLKKPVSR
Sbjct: 338 NLVKIGERLLKKPVSR 353

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142355|emb|CBI19558.3| unnamed protein product [Vitis vinifera]

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 87/196 (44%), Gaps = 57/196 (29%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS----- 56
           + K +   DA  +DI  GSS APTY PG    N   + +EG TQ F   D G A+     
Sbjct: 168 EVKRSPCLDAPLADICIGSSAAPTYFPGHYFKN---QDKEGKTQEFNLIDGGVAANNPAL 224

Query: 57  ----------------------------WVVGISS--------------TMWEV------ 68
                                        V+ I +              + W V      
Sbjct: 225 VAITQVTKQVFDKNPDFFPIKPMDFGRFLVISIGTGSPKSEQKYNAKMASKWGVLGWLLH 284

Query: 69  PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQ 128
            G++PLVD+F  A  DM+   +S   F+++ SE+NYLR QD++L G   S D   E+ + 
Sbjct: 285 GGSTPLVDVFMQASADMVDFHISM-VFQALHSEDNYLRIQDDTLRGKDASVDVTTEENLD 343

Query: 129 ELAKIGERLLKKPVSR 144
            L KIGERLLKKPVSR
Sbjct: 344 NLVKIGERLLKKPVSR 359

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492616|ref|XP_002282391.2| PREDICTED: patatin group A-3-like [Vitis vinifera]

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 87/196 (44%), Gaps = 57/196 (29%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS----- 56
           + K +   DA  +DI  GSS APTY PG    N   + +EG TQ F   D G A+     
Sbjct: 168 EVKRSPCLDAPLADICIGSSAAPTYFPGHYFKN---QDKEGKTQEFNLIDGGVAANNPAL 224

Query: 57  ----------------------------WVVGISS--------------TMWEV------ 68
                                        V+ I +              + W V      
Sbjct: 225 VAITQVTKQVFDKNPDFFPIKPMDFGRFLVISIGTGSPKSEQKYNAKMASKWGVLGWLLH 284

Query: 69  PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQ 128
            G++PLVD+F  A  DM+   +S   F+++ SE+NYLR QD++L G   S D   E+ + 
Sbjct: 285 GGSTPLVDVFMQASADMVDFHISM-VFQALHSEDNYLRIQDDTLRGKDASVDVTTEENLD 343

Query: 129 ELAKIGERLLKKPVSR 144
            L KIGERLLKKPVSR
Sbjct: 344 NLVKIGERLLKKPVSR 359

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147861175|emb|CAN80453.1| hypothetical protein VITISV_028107 [Vitis vinifera]

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 34/173 (19%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS----- 56
           Q KS  S DA  SDI  G+S APTY+P        P    G  + F   D G A+     
Sbjct: 170 QVKSRPSLDALLSDICIGTSAAPTYLPAHYFETKDPA---GRVREFNLIDGGVAANNPPM 226

Query: 57  -----WVVGISS--------------TMWEV------PGNSPLVDLFNSAGRDMIHVPMS 91
                 V+ + +                W V       G++PLV +F  A  DMI + +S
Sbjct: 227 DYGRFLVISLGTGSSKAEEKYNADEAAKWGVLGWLTSGGSTPLVKVFTQASGDMIDLHLS 286

Query: 92  FDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
            + F+++ SE +YLR QD++LSG   S D A ++ + +L +IGE LLKK VSR
Sbjct: 287 -EIFQALHSEKSYLRIQDDTLSGITSSVDIATKENLDDLVRIGEELLKKRVSR 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
TAIR|locus:2115065	428	PLP4 "AT4G37050" [Arabidopsis	0.475	0.200	0.411	2.2e-17
TAIR|locus:2114995	414	PLP1 [Arabidopsis thaliana (ta	0.497	0.217	0.361	1.2e-13
TAIR|locus:2066286	407	PLA2A "phospholipase A 2A" [Ar	0.491	0.218	0.439	1.1e-12
TAIR|locus:2158337	401	AT5G43590 [Arabidopsis thalian	0.397	0.179	0.328	4.1e-05

TAIR|locus:2115065 PLP4 "AT4G37050" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
 Identities = 37/90 (41%), Positives = 56/90 (62%)

Query:    55 ASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSG 114
             + W  G+   ++E  G++P++D ++ A  DM+    S   F+++ SE NYLR  D+SL G
Sbjct:   299 SKW--GLMCWVFE-SGSTPILDCYSEAIHDMVDYQSSV-VFQALRSEKNYLRIDDDSLKG 354

Query:   115 DAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
             D  S D + EK M+ L ++GE LLKK VSR
Sbjct:   355 DLGSVDISTEKNMEGLVEVGEALLKKRVSR 384

GO:0005575 "cellular_component" evidence=ND

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0004620 "phospholipase activity" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

TAIR|locus:2114995 PLP1 [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 34/94 (36%), Positives = 56/94 (59%)

Query:    49 YADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQ 108
             Y+    A W  GI S +++  G++P++D+   + RDMIH   S   F+++ SE+ YLR  
Sbjct:   269 YSAKKAAKW--GIISWLYD-DGSTPILDITMESSRDMIHYHSSV-VFKALQSEDKYLRID 324

Query:   109 DNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPV 142
             D++L GD  + D A +  ++ L KIGE++L   V
Sbjct:   325 DDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRV 358

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0004620 "phospholipase activity" evidence=IDA

GO:0010311 "lateral root formation" evidence=IMP

TAIR|locus:2066286 PLA2A "phospholipase A 2A" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 40/91 (43%), Positives = 55/91 (60%)

Query:    55 ASWVVGISSTMWEVPGNS-PLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLS 113
             A  V G     W    NS P++D F+ A  DM+   +S   FR++ SE NY+R QD++L+
Sbjct:   271 AKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSA-VFRALHSEANYIRIQDDTLT 329

Query:   114 GDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
             GDA S D A  + +  LAK G+ LLKKPV+R
Sbjct:   330 GDAASVDIATVENLDILAKTGDELLKKPVAR 360

GO:0006629 "lipid metabolic process" evidence=IEA;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009626 "plant-type hypersensitive response" evidence=IEP;IMP

GO:0016020 "membrane" evidence=IDA

GO:0016298 "lipase activity" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0008219 "cell death" evidence=IGI

GO:0031408 "oxylipin biosynthetic process" evidence=IMP

GO:0051607 "defense response to virus" evidence=IMP

GO:0071456 "cellular response to hypoxia" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009646 "response to absence of light" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0051707 "response to other organism" evidence=RCA

TAIR|locus:2158337 AT5G43590 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query:    72 SPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELA 131
             +P++D+   + RDM+    S   F+++ SE+NYLR   ++L  D    D +    ++ L 
Sbjct:   281 TPILDIIFESSRDMVQYHTSV-LFQALESEDNYLRIDADTLKKDEVFMDDSETLNLENLK 339

Query:   132 KIGERLLKKPVSR 144
              IGE+LL   V R
Sbjct:   340 NIGEKLLDTNVMR 352

GO:0005634 "nucleus" evidence=ISM

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0045735 "nutrient reservoir activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019472001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (398 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	181
cd07214	349	cd07214, Pat17_isozyme_like, Patatin-like phosphol	6e-20

>gnl|CDD|132853 cd07214, Pat17_isozyme_like, Patatin-like phospholipase of plants

 Score = 84.8 bits (210), Expect = 6e-20
 Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 55/194 (28%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS---WV 58
           +AK++   +A  +D+   +S APTY P         +   G  + F   D G A+    +
Sbjct: 154 KAKNDKLTNARLADVCISTSAAPTYFPAHYFTT---EDSNGDIREFNLVDGGVAANNPTL 210

Query: 59  VGISSTMWEVPGNSPLVD------------------------------------------ 76
           + IS    E+  ++P                                             
Sbjct: 211 LAISEVTKEIIKDNPFFASIKPLDYKKLLVLSLGTGSAEESYKYNAAAKWGLITWLSENG 270

Query: 77  ------LFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQEL 130
                 +F++A  DM+   +S   F+++ SE NYLR QD+SL+G A S D A E+ +++L
Sbjct: 271 XTPIIDIFSNASSDMVDYHLSV-IFQALDSEKNYLRIQDDSLTGTASSVDDATEENLEKL 329

Query: 131 AKIGERLLKKPVSR 144
            +IG++LLKKPVSR
Sbjct: 330 VEIGKKLLKKPVSR 343

Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates. Length = 349

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
cd07214	349	Pat17_isozyme_like Patatin-like phospholipase of p	100.0
cd07215	329	Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipa	99.97
cd07211	308	Pat_PNPLA8 Patatin-like phospholipase domain conta	99.9
cd07213	288	Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipa	99.89
cd07199	258	Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipas	99.89
cd07216	309	Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipa	99.82
cd07212	312	Pat_PNPLA9 Patatin-like phospholipase domain conta	99.77
cd07217	344	Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipa	99.75
COG3621	394	Patatin [General function prediction only]	99.53
KOG0513	503	consensus Ca2+-independent phospholipase A2 [Lipid	99.41
KOG4231	763	consensus Intracellular membrane-bound Ca2+-indepe	99.17
cd07208	266	Pat_hypo_Ecoli_yjju_like Hypothetical patatin simi	98.18
cd07225	306	Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domai	98.15
cd07205	175	Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholi	98.08
cd07228	175	Pat_NTE_like_bacteria Bacterial patatin-like phosp	97.86
cd07209	215	Pat_hypo_Ecoli_Z1214_like Hypothetical patatin sim	97.55
cd07198	172	Patatin Patatin-like phospholipase. Patatin is a s	97.42
cd07210	221	Pat_hypo_W_succinogenes_WS1459_like Hypothetical p	97.41
cd07227	269	Pat_Fungal_NTE1 Fungal patatin-like phospholipase	97.25
cd07230	421	Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TG	97.04
cd07232	407	Pat_PLPL Patain-like phospholipase. Patatin-like p	96.57
cd07222	246	Pat_PNPLA4 Patatin-like phospholipase domain conta	96.14
cd07206	298	Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and	95.84
PRK10279	300	hypothetical protein; Provisional	95.71
cd07218	245	Pat_iPLA2 Calcium-independent phospholipase A2; Cl	95.66
cd07204	243	Pat_PNPLA_like Patatin-like phospholipase domain c	95.52
cd07224	233	Pat_like Patatin-like phospholipase. Patatin-like	95.5
cd07221	252	Pat_PNPLA3 Patatin-like phospholipase domain conta	95.02
COG1752	306	RssA Predicted esterase of the alpha-beta hydrolas	94.34
COG4667	292	Predicted esterase of the alpha-beta hydrolase sup	93.68
cd07231	323	Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar	93.37
cd01819	155	Patatin_and_cPLA2 Patatins and Phospholipases. Pat	93.24
cd07219	382	Pat_PNPLA1 Patatin-like phospholipase domain conta	92.25
cd07220	249	Pat_PNPLA2 Patatin-like phospholipase domain conta	91.95
TIGR03607	739	patatin-related protein. This bacterial protein fa	82.9
cd07223	405	Pat_PNPLA5-mammals Patatin-like phospholipase doma	80.37

>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants

Probab=100.00  E-value=5.6e-35  Score=258.29  Aligned_cols=143  Identities=36%  Similarity=0.607  Sum_probs=122.8

Q ss_pred             ccCCCCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee---------------------------
Q 041075            4 KSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS---------------------------   56 (181)
Q Consensus         4 ~~~~~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A---------------------------   56 (181)
                      +.+...+++|||||||||||||||||+.+...   +..|+.+.+.+|||||++                           
T Consensus       156 ~~~~~~~~~l~da~rASSAaPtyFpp~~i~~~---~~~g~~~~~~~vDGGv~aNNP~~~A~~ea~~~~~~~~~~~~~~~~  232 (349)
T cd07214         156 KNDKLTNARLADVCISTSAAPTYFPAHYFTTE---DSNGDIREFNLVDGGVAANNPTLLAISEVTKEIIKDNPFFASIKP  232 (349)
T ss_pred             cCCcccCcCHHHHHHHhcccccccCCeEeecc---cCCCCcceEEEecCceecCCHHHHHHHHHHHhhhccCcccccccC
Confidence            34456789999999999999999999999764   222333567899999999                           


Q ss_pred             --------eEeccCC----------CCCCC-CCc-----hHHHHHHHHhhHHhhhhhhhhhhhhhcCCCCceEEeecCCC
Q 041075           57 --------WVVGISS----------TMWEV-PGN-----SPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSL  112 (181)
Q Consensus        57 --------lvlGTG~----------~~Wg~-~~~-----~pLidi~~~a~s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l  112 (181)
                              ++||||.          .+||. +|.     .||++++|+|++++|||+++ ++|+.+.++++|+|||++.+
T Consensus       233 ~~~~~i~vlSiGTG~~~~~~~~~~~~~wG~~~W~~~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~~~~Y~Ri~~~~~  311 (349)
T cd07214         233 LDYKKLLVLSLGTGSAEESYKYNAAAKWGLITWLSENGXTPIIDIFSNASSDMVDYHLS-VIFQALDSEKNYLRIQDDSL  311 (349)
T ss_pred             CCCCeEEEEEecCCCcccccChhhhccCCeeecccccCCchHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcEEEEecCCC
Confidence                    2339998          57998 776     89999999999999999999 99987777889999999844


Q ss_pred             CCCCCccccccHHHHHHHHHHHHHHhcCCCCccccccc
Q 041075          113 SGDAPSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMR  150 (181)
Q Consensus       113 ~~~~~~mDdas~~nl~~L~~~a~~ll~~~~~~~~~~~~  150 (181)
                      .....+|||++++|++.|+++|++++++++.++|++||
T Consensus       312 ~~~~~~~d~~~~~ni~~L~~~a~~~l~~~~~~~~~~~~  349 (349)
T cd07214         312 TGTASSVDDATEENLEKLVEIGKKLLKKPVSRVNLETG  349 (349)
T ss_pred             CCcccCcccCCHHHHHHHHHHHHHHHhCcccccCCCCC
Confidence            44446899999999999999999999999999999997

Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.

>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria

Probab=99.97  E-value=1.7e-31  Score=233.51  Aligned_cols=130  Identities=24%  Similarity=0.495  Sum_probs=113.9

Q ss_pred             CCCCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee-----------------------------
Q 041075            6 NASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS-----------------------------   56 (181)
Q Consensus         6 ~~~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A-----------------------------   56 (181)
                      ++..++++||||||||||||||||+.+...   +  |  +++.+|||||++                             
T Consensus       152 ~~~~~~~l~da~~ASsAaP~~F~p~~i~~~---~--g--~~~~~vDGGv~aNnP~~~a~~ea~~~~~~~~~~~~~~~i~v  224 (329)
T cd07215         152 NEQRDFYVRDVARATSAAPTYFEPARIHSL---T--G--EKYTLIDGGVFANNPTLCAYAEARKLKFEQPGKPTAKDMII  224 (329)
T ss_pred             CcccCccHHHHhHHHhhcccccCceEeecC---C--C--cEEEEecCceecCCHHHHHHHHHHHhhccCcCCCCcCceEE
Confidence            456789999999999999999999999754   1  3  467899999998                             


Q ss_pred             eEeccCC----------CCCCC-CCchHHHHHHHHhhHHhhhhhhhhhhhhhcCCCCceEEeecCCCCCCCCccccccHH
Q 041075           57 WVVGISS----------TMWEV-PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEK  125 (181)
Q Consensus        57 lvlGTG~----------~~Wg~-~~~~pLidi~~~a~s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~~~~mDdas~~  125 (181)
                      ++||||.          .+||. +|..||++++|+++++++|++++ ++|+....+++|+|||++ ++....+||+++++
T Consensus       225 lSiGTG~~~~~~~~~~~~~wG~~~W~~~l~~~~~~~~~~~~d~~~~-~l~~~~~~~~~Y~Ri~~~-l~~~~~~lD~a~~~  302 (329)
T cd07215         225 LSLGTGKNKKSYTYEKVKDWGLLGWAKPLIDIMMDGASQTVDYQLK-QIFDAEGDQQQYLRIQPE-LEDADPEMDDASPE  302 (329)
T ss_pred             EEecCCCCCCCCCHHHhcccCcccchHHHHHHHHhhhHHHHHHHHH-HHHhhcCCCCceEEEeCC-CCCCccccccCCHH
Confidence            3449998          57998 99999999999999999999999 999766677899999998 77666789999999


Q ss_pred             HHHHHHHHHHHHhcCCCCc
Q 041075          126 EMQELAKIGERLLKKPVSR  144 (181)
Q Consensus       126 nl~~L~~~a~~ll~~~~~~  144 (181)
                      ||+.|+++|+++++++..+
T Consensus       303 ~i~~L~~~~~~~~~~~~~~  321 (329)
T cd07215         303 NLEKLREVGQALAEDHKDQ  321 (329)
T ss_pred             HHHHHHHHHHHHHHHhHHH
Confidence            9999999999999877543

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8

Probab=99.90  E-value=4.6e-24  Score=184.59  Aligned_cols=114  Identities=21%  Similarity=0.236  Sum_probs=94.8

Q ss_pred             CCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee-----------------------eEeccCCC-
Q 041075            9 KDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS-----------------------WVVGISST-   64 (181)
Q Consensus         9 ~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A-----------------------lvlGTG~~-   64 (181)
                      .++++|||||||||||+||||+.+..            ..||||||++                       ++||||.. 
T Consensus       163 ~~~~l~dA~rASsAaP~~F~p~~i~~------------~~~vDGGv~aNnP~~~a~~ea~~~~~~~~i~~vlSiGTG~~~  230 (308)
T cd07211         163 CKHKLWEAIRASSAAPGYFEEFKLGN------------NLHQDGGLLANNPTALALHEAKLLWPDTPIQCLVSVGTGRYP  230 (308)
T ss_pred             ccccHHHHHHHhccchhcCCcEEECC------------CeEEECCcccCCcHHHHHHHHHHhCCCCCCcEEEEeCCCCCC
Confidence            46899999999999999999998742            2689999998                       44499981 


Q ss_pred             -----C-CCC-CCchHHHHHHHHhh-HHhhhhhhhhhhhhhcCCCCceEEeecCCCCCCCCccccccHHHHHHHHHHHHH
Q 041075           65 -----M-WEV-PGNSPLVDLFNSAG-RDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGER  136 (181)
Q Consensus        65 -----~-Wg~-~~~~pLidi~~~a~-s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~~~~mDdas~~nl~~L~~~a~~  136 (181)
                           . ++. .|..+|+++++.++ ++.+|++++ +++.    +++|+|||++ +... .+||++++++|+.|.+.|++
T Consensus       231 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~----~~~Y~R~~~~-~~~~-~~ld~~~~~~i~~l~~~~~~  303 (308)
T cd07211         231 SSVRLETGGYTSLKTKLLNLIDSATDTERVHTALD-DLLP----PDVYFRFNPV-MSEC-VELDETRPEKLDQLQDDTLE  303 (308)
T ss_pred             CcccchhhhhHHHHHHHHHHHHHccChHHHHHHHH-HhcC----CCceEEeccc-ccCC-CCcccCCHHHHHHHHHHHHH
Confidence                 1 222 58888999999884 588999999 8763    5799999998 6655 78999999999999999999


Q ss_pred             HhcCC
Q 041075          137 LLKKP  141 (181)
Q Consensus       137 ll~~~  141 (181)
                      ++++|
T Consensus       304 yl~~~  308 (308)
T cd07211         304 YIKRN  308 (308)
T ss_pred             HHhcC
Confidence            99875

PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.

>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase

Probab=99.89  E-value=1.5e-23  Score=180.32  Aligned_cols=104  Identities=28%  Similarity=0.448  Sum_probs=90.4

Q ss_pred             CCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee--------------------------eEecc
Q 041075            8 SKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS--------------------------WVVGI   61 (181)
Q Consensus         8 ~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A--------------------------lvlGT   61 (181)
                      ..++++||||+|||||||||||+    .            .+|||||++                          ++|||
T Consensus       143 ~~~~~l~d~~~ASsAaP~~F~p~----~------------~~iDGGv~~NnP~~~a~~~a~~~~~~~~~~~~i~vlSiGt  206 (288)
T cd07213         143 DLDELLVDVCLRSSAAPTYFPSY----Q------------GYVDGGVFANNPSLCAIAQAIGEEGLNIDLKDIVVLSLGT  206 (288)
T ss_pred             CccccHHHHHHHhccccccchhh----h------------ceecceeecCChHHHHHHHHHhccccCCCcccEEEEEecC
Confidence            56789999999999999999998    2            489999998                          44599


Q ss_pred             CC-----------CCCCC-CCchHHHHHHHHhhHHhhhhhhhhhhhhhcCCCCceEEeecCCCCCCCCccccccHHHHHH
Q 041075           62 SS-----------TMWEV-PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQE  129 (181)
Q Consensus        62 G~-----------~~Wg~-~~~~pLidi~~~a~s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~~~~mDdas~~nl~~  129 (181)
                      |.           .+||. +|..+|++++|+|+++++|++++ ++++     ++|+|||++ ++.   .+|..+++||+.
T Consensus       207 G~~~~~~~~~~~~~~~G~~~w~~~l~~~~~~~~~~~~~~~~~-~~~~-----~~y~Ri~~~-l~~---~~~~~~~~~i~~  276 (288)
T cd07213         207 GRPPSYLDGANGYGDWGLLQWLPDLLDLFMDAGVDAADFQCR-QLLG-----ERYFRLDPV-LPA---NIDLDDNKQIEE  276 (288)
T ss_pred             CCCCCCccchhhccccceecccchhHHHHHHHHHHHHHHHHH-HHcc-----CcEEEeCCC-CCc---ccCccCHHHHHH
Confidence            97           35888 89999999999999999999999 9875     799999998 643   466677999999


Q ss_pred             HHHHHHHH
Q 041075          130 LAKIGERL  137 (181)
Q Consensus       130 L~~~a~~l  137 (181)
                      |+++|++.
T Consensus       277 l~~~~~~~  284 (288)
T cd07213         277 LVEIANTV  284 (288)
T ss_pred             HHHHHHhc
Confidence            99999875

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17

Probab=99.89  E-value=3.8e-23  Score=174.44  Aligned_cols=124  Identities=27%  Similarity=0.429  Sum_probs=105.1

Q ss_pred             CCCCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee------------------------eEecc
Q 041075            6 NASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS------------------------WVVGI   61 (181)
Q Consensus         6 ~~~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A------------------------lvlGT   61 (181)
                      ++..++++||||+||||||+||||+.+...      +  ..+.+||||+++                        ++|||
T Consensus       100 ~~~~~~~l~d~~~ASsAaP~~f~p~~i~~~------~--~~~~~vDGGv~~NnP~~~a~~ea~~~~~~~~~~~~vlSiGT  171 (258)
T cd07199         100 DDDDDFKLWDVARATSAAPTYFPPAVIESG------G--DEGAFVDGGVAANNPALLALAEALRLLAPDKDDILVLSLGT  171 (258)
T ss_pred             CCcCCccHHHHHHHHhcchhccCcEEeccC------C--CeeEEecCccccCChHHHHHHHHHHhcCCCCCceEEEEecC
Confidence            345789999999999999999999998642      1  245899999999                        45599


Q ss_pred             CC----------CCCCC-CCchHHHHHHHHhhHHhhhhhhhhhhhhhcCCCCceEEeecCCCCCCCCccccccHHHHHHH
Q 041075           62 SS----------TMWEV-PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQEL  130 (181)
Q Consensus        62 G~----------~~Wg~-~~~~pLidi~~~a~s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~~~~mDdas~~nl~~L  130 (181)
                      |.          ..|+. .|..+++.++|++++++++++++ +++.....+++|+|||++ ++.....+|++++++++.|
T Consensus       172 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~y~R~~~~-~~~~~~~~d~~~~~~~~~l  249 (258)
T cd07199         172 GTSPSSSSSKKASRWGGLGWGRPLLDILMDAQSDGVDQWLD-LLFGSLDSKDNYLRINPP-LPGPIPALDDASEANLLAL  249 (258)
T ss_pred             CCCCCCcCHHHhhccCccccHHHHHHHHHHhhHHHHHHHHH-HHhhcccCCCeEEEEcCC-CCCCcccchhCCHHHHHHH
Confidence            99          34655 88999999999999999999999 887644556899999998 7776667899999999999


Q ss_pred             HHHHHHHhc
Q 041075          131 AKIGERLLK  139 (181)
Q Consensus       131 ~~~a~~ll~  139 (181)
                      ..+++++++
T Consensus       250 ~~~~~~~~~  258 (258)
T cd07199         250 DSAAFELIE  258 (258)
T ss_pred             HHHHHHHhC
Confidence            999998863

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase

Probab=99.82  E-value=1.2e-20  Score=163.75  Aligned_cols=115  Identities=19%  Similarity=0.215  Sum_probs=91.9

Q ss_pred             CCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee-------------------------eEeccC
Q 041075            8 SKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS-------------------------WVVGIS   62 (181)
Q Consensus         8 ~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A-------------------------lvlGTG   62 (181)
                      ..++++||||||||||||||||+.+. .         ..+.+|||||++                         ++||||
T Consensus       161 ~~~~~l~~a~rASsAaP~~f~p~~~~-~---------~~~~~vDGGv~~NnP~~~a~~ea~~~~~~~~~~~~~vlSiGTG  230 (309)
T cd07216         161 YKNATIWEAARATSAAPTFFDPVKIG-P---------GGRTFVDGGLGANNPIREVWSEAVSLWEGLARLVGCLVSIGTG  230 (309)
T ss_pred             ccCccHHHHHHHHhhhHhhCCCEEec-C---------CCceEecCCcccCCcHHHHHHHHHHHhCCCCCCccEEEEECCC
Confidence            67899999999999999999999884 1         134799999999                         344999


Q ss_pred             C-------CCCCC-CCchHHHHHHHHhhHHhhhhhhhhhhhhhcCCCCceEEeecCCCCCCCCccccccHHHHHHHHHHH
Q 041075           63 S-------TMWEV-PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIG  134 (181)
Q Consensus        63 ~-------~~Wg~-~~~~pLidi~~~a~s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~~~~mDdas~~nl~~L~~~a  134 (181)
                      .       ..++. .|..++++++++++++..+++.. +..  +..+++|+|||++ +.....+||+  .++++.|.+.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~-~~~--~~~~~~Y~R~n~~-~~~~~~~ld~--~~~~~~l~~~t  304 (309)
T cd07216         231 TPSIKSLGRSAEGAGLLKGLKDLVTDTEAEAKRFSAE-HSE--LDEEGRYFRFNVP-HGLEDVGLDE--YEKMEEIVSLT  304 (309)
T ss_pred             CCCCcccccchhHHHHHHHHHHHhhChHHHHHHHHHH-Hhc--cCCCCeEEEECCC-CCCCCCChhh--hccHHHHHHHH
Confidence            8       12222 67889999999999999988876 511  2235799999998 6555568999  57899999999


Q ss_pred             HHHh
Q 041075          135 ERLL  138 (181)
Q Consensus       135 ~~ll  138 (181)
                      ++++
T Consensus       305 ~~yl  308 (309)
T cd07216         305 REYL  308 (309)
T ss_pred             HHhh
Confidence            9987

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9

Probab=99.77  E-value=4.4e-19  Score=155.02  Aligned_cols=115  Identities=16%  Similarity=0.114  Sum_probs=88.5

Q ss_pred             CCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee-------------------------------
Q 041075            8 SKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS-------------------------------   56 (181)
Q Consensus         8 ~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A-------------------------------   56 (181)
                      .++.+|||||||||||||||||+    .            .+|||||++                               
T Consensus       144 ~~~~~l~~a~rASsAaP~~F~p~----~------------~~vDGGv~~NnP~~~a~~Ea~~~~~~~~~~~~~~~~~~i~  207 (312)
T cd07212         144 PAEQLLWRAARSSGAAPTYFRPM----G------------RFLDGGLIANNPTLDAMTEIHEYNKTLKSKGRKNKVKKIG  207 (312)
T ss_pred             cccccHHHHHHhhcccccccccc----c------------ceecCceeccChHHHHHHHHHHhcccccccccCCCCCccc
Confidence            35789999999999999999998    2            378999998                               


Q ss_pred             --eEeccCCC---C--------------CCC--CCchHHHHHHHHhhHHhhhhhhhhhhhhhcC-CCCceEEeecCCCCC
Q 041075           57 --WVVGISST---M--------------WEV--PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIA-SENNYLRFQDNSLSG  114 (181)
Q Consensus        57 --lvlGTG~~---~--------------Wg~--~~~~pLidi~~~a~s~~vd~~l~~~l~~~~~-~~~~YlRIq~~~l~~  114 (181)
                        ++||||..   .              |..  .|.++|++++|++..+..++++. +.-.... .+.+|+|+|++ +. 
T Consensus       208 ~vvSiGTG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~t~t~~~~~~-~~~~~~~~~~~~Y~Rfn~~-l~-  284 (312)
T cd07212         208 CVVSLGTGIIPQTPVNTVDVFRPSNPWELAKTVFGAKNLGKMVVDQCTASDGAPVD-RARAWCESIGIPYFRFSPP-LS-  284 (312)
T ss_pred             EEEEeCCCCCCCcccCCcccccCcchHHHHHHHHHHHHHHHHHHHHhcCCCchHHH-HHHHHHHhcCCceEEeCCc-cC-
Confidence              23399981   1              111  23478999999998887777765 3211110 14689999998 65 


Q ss_pred             CCCccccccHHHHHHHHHHHHHHhcCC
Q 041075          115 DAPSTDKAIEKEMQELAKIGERLLKKP  141 (181)
Q Consensus       115 ~~~~mDdas~~nl~~L~~~a~~ll~~~  141 (181)
                      +...||+++++||++|...++.++++|
T Consensus       285 ~~~~lde~~~~~l~~l~~~~~~yi~~~  311 (312)
T cd07212         285 KDIMLDETDDEDLVNMLWDTEVYIYTH  311 (312)
T ss_pred             CCcCCCcCCHHHHHHHHHHHHHHHHhc
Confidence            567999999999999999999999876

PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.

>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase

Probab=99.75  E-value=2.2e-18  Score=152.65  Aligned_cols=115  Identities=16%  Similarity=0.144  Sum_probs=84.2

Q ss_pred             CCCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeecccccee-e-----------------------------
Q 041075            7 ASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQA-S-----------------------------   56 (181)
Q Consensus         7 ~~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~-A-----------------------------   56 (181)
                      +..+++|||||||||||||||||+.+...   +  |  +++.||||||+ +                             
T Consensus       155 ~~~~~~L~da~rASsAaPt~FpP~~i~~~---~--~--~~~~lVDGGv~aaNNP~l~A~~ea~~~~~~~~~~~~~~~i~v  227 (344)
T cd07217         155 CNLDLPLWQLVRASTAAPTFFPPEVVSIA---P--G--TAFVFVDGGVTTYNNPAFQAFLMATAKPYKLNWEVGADNLLL  227 (344)
T ss_pred             cccCCcHHHHHHHHccCccccCceEEEec---C--C--ceEEEECCccccccCHHHHHHHHHHHhhhcccCCCCCCcEEE
Confidence            45679999999999999999999998643   1  2  36789999998 4                             


Q ss_pred             eEeccCC----------CCCCC-CCchHHHHHHHHhhHHhhhhhhhhhhh------------hhcC-----CC---CceE
Q 041075           57 WVVGISS----------TMWEV-PGNSPLVDLFNSAGRDMIHVPMSFDFF------------RSIA-----SE---NNYL  105 (181)
Q Consensus        57 lvlGTG~----------~~Wg~-~~~~pLidi~~~a~s~~vd~~l~~~l~------------~~~~-----~~---~~Yl  105 (181)
                      ++||||.          .+||. +|..||+++||++++..+|++++ +.-            ..+.     .+   -.|.
T Consensus       228 lSiGTG~~~~~~~~~~~~~~g~~~w~~~l~~~lm~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (344)
T cd07217         228 VSVGTGFAPEARPDLKAADMWALDHAKYIPSALMNAANAGQDMVCR-VLGECRKGGLVDREIGTMHVDPNWLGPKLFTYV  306 (344)
T ss_pred             EEECCCCCCCCCccccccccChhhhHHHHHHHHhcchhhHHHHHHH-HcCCCCccchhhHHhhhhhccccCCCCceEEEE
Confidence            3449998          56888 99999999999999999998887 531            0000     01   1599


Q ss_pred             EeecCCCCCC---CCccccccHHHHHHH
Q 041075          106 RFQDNSLSGD---APSTDKAIEKEMQEL  130 (181)
Q Consensus       106 RIq~~~l~~~---~~~mDdas~~nl~~L  130 (181)
                      |+++. +...   ...++|...+++++|
T Consensus       307 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~  333 (344)
T cd07217         307 RYDVS-LSRSGLDVLGLSDSQLEAVQKM  333 (344)
T ss_pred             Eeccc-cchhccccccCchhhHHHHHhh
Confidence            99886 4332   224566666666654

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.

>COG3621 Patatin [General function prediction only]

Probab=99.53  E-value=4.3e-15  Score=130.73  Aligned_cols=47  Identities=28%  Similarity=0.349  Sum_probs=40.8

Q ss_pred             ccCCCCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075            4 KSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus         4 ~~~~~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      ..+...|++|||||+||||||||||||+++..   +   +++.+.+|||||+|
T Consensus       155 ~~~ry~~~~LsDii~~stAAPtyFp~h~~~~i---~---~~k~~~~iDGGv~A  201 (394)
T COG3621         155 RPSRYNNYKLSDIILASTAAPTYFPPHHFENI---T---NTKYHPIIDGGVVA  201 (394)
T ss_pred             cccccccchHHHHHHhcccCCcccCccccccc---c---cccceeeecceeee
Confidence            34457899999999999999999999999887   2   34678999999999

>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=99.41  E-value=3.1e-13  Score=125.12  Aligned_cols=158  Identities=25%  Similarity=0.227  Sum_probs=129.7

Q ss_pred             CCCCCChhhhhhhc--CCCCCCCCc-eeeeccCcCcCCCcceeeeccccc-eee--------------------------
Q 041075            7 ASKDAFPSDISTGS--SPAPTYVPG-SRLINLKPKIQEGVTQSFTYADHG-QAS--------------------------   56 (181)
Q Consensus         7 ~~~d~~l~DVa~AT--SAAPTYFPp-~~~~~~~~~~~~g~~~~~~lIDGG-v~A--------------------------   56 (181)
                      +..++.++++|++|  ||||++||| +.+...   |..|....+.++||| +++                          
T Consensus       211 ~~~~~~~~~~c~~t~~sa~~~~f~~~~~~~~~---Dg~~~~~~~~~~~~g~~~m~n~t~~~~~~~~~~~~~~p~~~~~~~  287 (503)
T KOG0513|consen  211 PLLDFKAIDICIDTYGSAAPTIFPPILGFPSE---DGQGIKTVCVLLDGGDIAMNNPTLHAITHVTANKRPFPPLLGLFR  287 (503)
T ss_pred             hhhhhhhhhhhhccccccCccccCcccccccc---cccccceeeEEecchhhhccCchHhhhhhhhhhcccCCccccccc
Confidence            56689999999999  999999999 888876   433334678999999 777                          


Q ss_pred             --------eEe--ccCC---------------CCCCC-CCch-------HHHHHHHHhhHHhhh----hhhhhhhhhhcC
Q 041075           57 --------WVV--GISS---------------TMWEV-PGNS-------PLVDLFNSAGRDMIH----VPMSFDFFRSIA   99 (181)
Q Consensus        57 --------lvl--GTG~---------------~~Wg~-~~~~-------pLidi~~~a~s~~vd----~~l~~~l~~~~~   99 (181)
                              +++  |+|.               ..|+. .|..       |+.+++.+++.+++|    ++.. +.|.+..
T Consensus       288 ~~~~~~~~lv~~~G~G~~~~q~l~~~e~~~~~a~~~~f~w~~gtstg~~~~~~i~~~~s~d~v~~~y~~~k~-~~F~~~r  366 (503)
T KOG0513|consen  288 YRLRVDDNLVLSDGGGIPIIQVLYWIEKRCGTAAWGYFDWFNGTSTGSTIMADIALDGSSDEVDRMYLQMKD-VVFDGLR  366 (503)
T ss_pred             ccccccceEEEecCCCChhHHHHHhHHHhcccccccccccccccCcCceeehhhhhcccHHHHHHHHHHHhH-Hhhhccc
Confidence                    333  9998               45777 6766       999999999999999    8878 9999899


Q ss_pred             CCCceEEeecC--CCCCCCCcccccc-HHHHHHHHH--HHHHHhcCCCCccccccceeec-CCCCChHHHHHHHHhh
Q 041075          100 SENNYLRFQDN--SLSGDAPSTDKAI-EKEMQELAK--IGERLLKKPVSRPVYAMRRIIH-SGLCSNSMILALVLST  170 (181)
Q Consensus       100 ~~~~YlRIq~~--~l~~~~~~mDdas-~~nl~~L~~--~a~~ll~~~~~~~~~~~~~~~~-~~~~tn~~~l~~~~~~  170 (181)
                      ++.+|.||+..  ...+....+|... ..|+..+..  .+++++..++.+...++++  | ..+.+|.+++++++.-
T Consensus       367 ~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~~i~~~~--~~~~~~snde~~~~~~~~  441 (503)
T KOG0513|consen  367 SEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRHNINGGK--PRSEEVSNDEALEEPAMQ  441 (503)
T ss_pred             CCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhcccccccccc--ccccccccchhhhhHHHH
Confidence            88999999932  2344455677554 789999999  9999999999999999998  4 6678999999998753

>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]

Probab=99.17  E-value=2.9e-11  Score=111.76  Aligned_cols=138  Identities=17%  Similarity=0.166  Sum_probs=97.2

Q ss_pred             CCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee-----------------------eEeccCC-
Q 041075            8 SKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS-----------------------WVVGISS-   63 (181)
Q Consensus         8 ~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A-----------------------lvlGTG~-   63 (181)
                      ..+.++|++.||+||||.||.-+.+.+            +..=|||++|                       .+||+|. 
T Consensus       572 gc~h~~WqAIrASsAAP~Yf~e~~lgn------------~l~QDGgi~aNNPta~A~hEaklLWPD~~i~C~VSiGsGr~  639 (763)
T KOG4231|consen  572 GCKHQVWQAIRASSAAPYYFDEFSLGN------------YLWQDGGIVANNPTAFAIHEAKLLWPDTKIDCLVSIGSGRV  639 (763)
T ss_pred             cchHHHHHHHHhcccCCcchhhhcccc------------ceeccCcEeecCccHHHhhhhhccCCCCCccEEEEecCCcc
Confidence            457899999999999999998776643            3677999999                       3449999 


Q ss_pred             ----CC--CCC-CCchHHHHHHHHhh-HHhhhhhhhhhhhhhcCCCCceEEeecCCCCCCCCccccccHHHHHHHHHHHH
Q 041075           64 ----TM--WEV-PGNSPLVDLFNSAG-RDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGE  135 (181)
Q Consensus        64 ----~~--Wg~-~~~~pLidi~~~a~-s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~~~~mDdas~~nl~~L~~~a~  135 (181)
                          ++  |.. .-...|++++-++. .+-|+.++-     ...+++.|+|++|. ... ...||.++++-++.|...++
T Consensus       640 ~t~Vr~~tv~yts~~~kL~~~i~SatdtEevh~~l~-----~mLPe~~YfRFNPv-m~~-~~~LDE~d~e~l~ql~~~~e  712 (763)
T KOG4231|consen  640 PTRVRKGTVRYTSTGQKLIESICSATDTEEVHSTLL-----PMLPEIQYFRFNPV-MDR-CMELDETDPEILLQLEAAIE  712 (763)
T ss_pred             cccccCCceEEecHHHHHHHHHhcccchHHHHHhhh-----ccCCchheEecchh-hhc-ccCcCccCHHHHHHHHHHHH
Confidence                22  221 22456777766654 233433333     35567899999996 444 47999999999999999999


Q ss_pred             HHhcCCCCccccccceeecCCCCChHHHHHH
Q 041075          136 RLLKKPVSRPVYAMRRIIHSGLCSNSMILAL  166 (181)
Q Consensus       136 ~ll~~~~~~~~~~~~~~~~~~~~tn~~~l~~  166 (181)
                      +++++|..+.--.-.+.  .-+.+|.++.-+
T Consensus       713 ~yI~rN~qk~k~vaerL--~l~~~~~qk~~~  741 (763)
T KOG4231|consen  713 EYIQRNPQKFKNVAERL--TLPFLNDQKWCD  741 (763)
T ss_pred             HHHHhChHHHHHHHHHh--cCCcchhHHHhh
Confidence            99998866533222222  445667776653

>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli

Probab=98.18  E-value=1.2e-05  Score=68.14  Aligned_cols=113  Identities=19%  Similarity=0.222  Sum_probs=63.6

Q ss_pred             CCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee---------------eEeccCCCCCCC--CCch
Q 041075           10 DAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS---------------WVVGISSTMWEV--PGNS   72 (181)
Q Consensus        10 d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A---------------lvlGTG~~~Wg~--~~~~   72 (181)
                      +..++|+++||||.|.+|||..+.        |    ..+||||+..               +|+-|-...+..  .|..
T Consensus       127 ~~~l~~av~AS~aiP~~f~pv~i~--------g----~~yvDGGv~~~~P~~~a~~~g~~~iivv~t~~~~~~~~~~~~~  194 (266)
T cd07208         127 LDDLLDALRASSALPGLFPPVRID--------G----EPYVDGGLSDSIPVDKAIEDGADKIVVILTRPRGYRKKPSKSS  194 (266)
T ss_pred             chHHHHHHHHHhcchhhcCCEEEC--------C----EEEEcCccCcchhHHHHHHcCCCeEEEEecCCCCCccCcchhH
Confidence            456899999999999999998773        2    2689999999               334443322221  2333


Q ss_pred             HHHHHHHHhhHHhhhhhhhh--------hhhhhcCCCCceEEeecCCCCCCCCccccccHHHHHHHHHHHHH
Q 041075           73 PLVDLFNSAGRDMIHVPMSF--------DFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGER  136 (181)
Q Consensus        73 pLidi~~~a~s~~vd~~l~~--------~l~~~~~~~~~YlRIq~~~l~~~~~~mDdas~~nl~~L~~~a~~  136 (181)
                      ++++++......+++.++.+        .....+..+.+.+=|.|+. .- ....-.-+.+.++.+-+.|.+
T Consensus       195 ~~~~~~~~~~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~i~P~~-~~-~~~~~~~d~~~l~~~y~~Gy~  264 (266)
T cd07208         195 PLAKLLYRKYPNLVEALLRRHSRYNETLEFIRRLEAEGKIFVIAPEK-PL-KVSRLERDPEKLEALYDLGYE  264 (266)
T ss_pred             HHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhCcccCCeEEEEeCCC-CC-CCCCCcCCHHHHHHHHHHHHh
Confidence            55555555444444443331        1111122334566665541 11 112223446778888777754

Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7

Probab=98.15  E-value=1.3e-05  Score=70.23  Aligned_cols=38  Identities=16%  Similarity=0.025  Sum_probs=31.2

Q ss_pred             CCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075            9 KDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus         9 ~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .+-.++++++||||.|++|||+.+...          ...+|||||+.
T Consensus       139 ~~g~l~~avrAS~siP~~f~Pv~~~~~----------g~~~vDGGv~~  176 (306)
T cd07225         139 TDGSLWRYVRASMSLSGYLPPLCDPKD----------GHLLMDGGYIN  176 (306)
T ss_pred             cCCCHHHHHHHHhcCCeeccceEeCCC----------CeEEEeccccC
Confidence            345799999999999999999875322          24799999999

Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE

>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1

Probab=98.08  E-value=1.7e-06  Score=68.78  Aligned_cols=35  Identities=14%  Similarity=0.105  Sum_probs=30.1

Q ss_pred             CCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           10 DAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        10 d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      +..++|+++||||+|.||||+++..            ..++|||+.+
T Consensus       121 ~~~l~~av~AS~a~P~~f~pv~~~g------------~~~~DGG~~~  155 (175)
T cd07205         121 SGSLVRAVRASMSIPGIFPPVKIDG------------QLLVDGGVLN  155 (175)
T ss_pred             CCCHHHHHHHHcccccccCCEEECC------------EEEEeccCcC
Confidence            4579999999999999999998742            2689999987

Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc

>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6

Probab=97.86  E-value=7.2e-06  Score=65.49  Aligned_cols=35  Identities=14%  Similarity=0.035  Sum_probs=29.8

Q ss_pred             CCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           10 DAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        10 d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      +..++|+++||||.|.||||..+..            ..+||||+..
T Consensus       121 ~~~l~~av~AS~a~P~~f~p~~~~g------------~~~vDGG~~~  155 (175)
T cd07228         121 EGSLIDAIRASISIPGIFAPVEHNG------------RLLVDGGVVN  155 (175)
T ss_pred             CCCHHHHHHHHcccCccccCEEECC------------EEEEeccCcC
Confidence            3569999999999999999998732            2799999876

Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.

>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli

Probab=97.55  E-value=3.1e-05  Score=64.07  Aligned_cols=34  Identities=18%  Similarity=0.251  Sum_probs=29.6

Q ss_pred             CChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           11 AFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        11 ~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      ..++|+++||+|.|.||||+.+..            ..++|||+.+
T Consensus       112 ~~~~~av~AS~aiP~~f~pv~i~g------------~~yvDGGv~~  145 (215)
T cd07209         112 GILPEHLLASAALPPFFPPVEIDG------------RYYWDGGVVD  145 (215)
T ss_pred             chHHHHHHHhccccccCCCEEECC------------eEEEcCcccc
Confidence            468999999999999999998842            2689999988

Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>cd07198 Patatin Patatin-like phospholipase

Probab=97.42  E-value=5.4e-05  Score=60.21  Aligned_cols=38  Identities=24%  Similarity=0.200  Sum_probs=30.7

Q ss_pred             CCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075            9 KDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus         9 ~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .+..++|+++||||.|+||||..+...      |    ..++|||+..
T Consensus       120 ~~~~l~~av~AS~aiP~~f~p~~~~~~------g----~~~vDGGv~~  157 (172)
T cd07198         120 SKGELWSAVRASSSIPGYFGPVPLSFR------G----RRYGDGGLSN  157 (172)
T ss_pred             CcchHHHHHHHHcchhhhcCceeecCC------C----eEEEeCCccc
Confidence            345799999999999999999988422      2    2689999876

Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.

>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes

Probab=97.41  E-value=7.5e-05  Score=62.37  Aligned_cols=34  Identities=15%  Similarity=0.169  Sum_probs=29.5

Q ss_pred             CChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           11 AFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        11 ~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      ..++|+++||||.|.||||..+..            ..+||||+..
T Consensus       122 ~~l~~av~AS~aiP~~f~Pv~i~g------------~~~vDGGv~~  155 (221)
T cd07210         122 GDLAEAVAASCAVPPLFQPVEIGG------------RPFVDGGVAD  155 (221)
T ss_pred             CCHHHHHHHHcccccccCCEEECC------------EEEEeccccc
Confidence            468999999999999999998732            2799999988

Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.

>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6

Probab=97.25  E-value=0.00051  Score=59.41  Aligned_cols=35  Identities=11%  Similarity=0.024  Sum_probs=30.0

Q ss_pred             CCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           10 DAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        10 d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      +-.++++++||+|-|.+|||..+..            ..++|||+..
T Consensus       135 ~g~l~~avrAS~slPg~~pPv~~~G------------~~~vDGGv~d  169 (269)
T cd07227         135 SGYAWRYIRASMSLAGLLPPLSDNG------------SMLLDGGYMD  169 (269)
T ss_pred             CCCHHHHHHHHccchhcCCCEEECC------------EEEEcccCCc
Confidence            3458999999999999999998732            3789999999

These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.

>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5

Probab=97.04  E-value=0.00034  Score=64.01  Aligned_cols=47  Identities=21%  Similarity=0.282  Sum_probs=35.9

Q ss_pred             CCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcce-----eeeccccceee
Q 041075            8 SKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQ-----SFTYADHGQAS   56 (181)
Q Consensus         8 ~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~-----~~~lIDGGv~A   56 (181)
                      ..|+.+|++++||+|.|++|||..+...+|.  +|+..     ...++||||..
T Consensus       214 ~p~v~I~~AV~AS~AlP~vf~pv~l~~Kd~~--~g~i~p~~~~g~~~vDGgv~~  265 (421)
T cd07230         214 APNVLIWSAVCASCSVPGVFPSSPLYEKDPK--TGEIVPWNPSSVKWIDGSVDN  265 (421)
T ss_pred             CCCcHHHHHHHHhcCchhhcCCeEEEeecCC--CCceecccCCCCceeCCCccc
Confidence            4677899999999999999999998654321  24432     23589999998

TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.

>cd07232 Pat_PLPL Patain-like phospholipase

Probab=96.57  E-value=0.0014  Score=59.81  Aligned_cols=45  Identities=11%  Similarity=0.045  Sum_probs=34.9

Q ss_pred             CCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcc-----eeeeccccceee
Q 041075            9 KDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVT-----QSFTYADHGQAS   56 (181)
Q Consensus         9 ~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~-----~~~~lIDGGv~A   56 (181)
                      .|+.+|++++||+|.|.+|||..+-..   +.+|+.     ....++||||..
T Consensus       205 p~v~I~sAV~AS~svPgvf~pv~l~~k---~~~g~~~~~~~~g~~~~DGgv~~  254 (407)
T cd07232         205 PNCTIWSAVLASAAVPGILNPVVLMMK---DPDGTLIPPFSFGSKWKDGSLRT  254 (407)
T ss_pred             CccHHHHHHhcccCccccccCeEEEee---cCCCCcccccCCCCceecCCcCc
Confidence            467899999999999999999998654   233432     123689999998

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.

>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4

Probab=96.14  E-value=0.0027  Score=53.84  Aligned_cols=33  Identities=15%  Similarity=0.140  Sum_probs=27.7

Q ss_pred             ChhhhhhhcCCCCCC--CCceeeeccCcCcCCCcceeeeccccceee
Q 041075           12 FPSDISTGSSPAPTY--VPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        12 ~l~DVa~ATSAAPTY--FPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .|.|+++||+|.|.|  |+|..+..            ..+||||+..
T Consensus       130 ~L~~av~AS~aiP~~~g~~pv~~~G------------~~~vDGGv~~  164 (246)
T cd07222         130 DLIKVLLASCYVPVYAGLKPVEYKG------------QKWIDGGFTN  164 (246)
T ss_pred             hHHHHHHHhhcCccccCCCCeEECC------------EEEEecCccC
Confidence            489999999999999  58877742            2789999998

PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.

>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase

Probab=95.84  E-value=0.0053  Score=54.08  Aligned_cols=109  Identities=15%  Similarity=0.105  Sum_probs=60.1

Q ss_pred             CCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcce----eeeccccceeeeEeccCCCCCCCCCchHHHHHHHHhhHH
Q 041075            9 KDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQ----SFTYADHGQASWVVGISSTMWEVPGNSPLVDLFNSAGRD   84 (181)
Q Consensus         9 ~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~----~~~lIDGGv~AlvlGTG~~~Wg~~~~~pLidi~~~a~s~   84 (181)
                      .|+.+|++++||+|.|.+|||..+...   +.+|+..    ...++|||+..              ..|+-.+.-.   -
T Consensus       161 pnv~i~sAv~AS~slP~~f~pv~l~~k---~~~g~~~p~~~g~~~~DGgv~~--------------~iPv~~l~~~---~  220 (298)
T cd07206         161 PNVLIWSAVLASCAVPGVFPPVMLMAK---NRDGEIVPYLPGRKWVDGSVSD--------------DLPAKRLARL---Y  220 (298)
T ss_pred             CchHHHHHHhhccCccccccCeEEEee---cCCCccccCCCCCcccCCCcCc--------------chHHHHHHHH---c
Confidence            467899999999999999999988554   2234311    23578999765              4453322100   0


Q ss_pred             hhhhhhhhhhhhhc----CCCCceEEeecCCCC--CCCCccccccHHHHHHHHHHHHHHh
Q 041075           85 MIHVPMSFDFFRSI----ASENNYLRFQDNSLS--GDAPSTDKAIEKEMQELAKIGERLL  138 (181)
Q Consensus        85 ~vd~~l~~~l~~~~----~~~~~YlRIq~~~l~--~~~~~mDdas~~nl~~L~~~a~~ll  138 (181)
                      .+++.+.-|.-+..    ..-.--+-|-|+ +.  .-..-+.|.+++.|+.++..|++-.
T Consensus       221 nvn~~Ivsq~np~~~pf~q~~~gditI~P~-~~~~~~~~~l~~p~~~~~~~~~~~G~r~t  279 (298)
T cd07206         221 NVNHFIVSQTNPHVVPFLQEYSGDITIIPP-FSFSNPLKLLSNPSEDELQRLILEGERAT  279 (298)
T ss_pred             CCCeEEEEcccCcccceeeeccCcEEEeeC-ccHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            02222110111100    000012333333 22  1122467889999999999998843

Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.

>PRK10279 hypothetical protein; Provisional

Probab=95.71  E-value=0.0054  Score=53.79  Aligned_cols=34  Identities=9%  Similarity=-0.045  Sum_probs=29.5

Q ss_pred             CChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           11 AFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        11 ~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      -.++++++||+|=|..|||..+.            .+.||||||..
T Consensus       127 g~l~~avrAS~aiP~vf~Pv~~~------------g~~~vDGGv~~  160 (300)
T PRK10279        127 GDLHLAIRASCSMPGLMAPVAHN------------GYWLVDGAVVN  160 (300)
T ss_pred             CCHHHHHHHhcccccCCCCEEEC------------CEEEEECccCc
Confidence            35789999999999999999873            23899999998

>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2

Probab=95.66  E-value=0.0058  Score=52.04  Aligned_cols=34  Identities=18%  Similarity=0.170  Sum_probs=26.5

Q ss_pred             CChhhhhhhcCCCCCCC--CceeeeccCcCcCCCcceeeeccccceee
Q 041075           11 AFPSDISTGSSPAPTYV--PGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        11 ~~l~DVa~ATSAAPTYF--Pp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      -.|+|+.+|||+.|.|+  .|..+.        |    ..+||||+..
T Consensus       127 ~dLi~al~AS~~IP~~~g~~P~~~~--------G----~~~vDGGv~d  162 (245)
T cd07218         127 EELLQALLCSCFIPVFSGLLPPKFR--------G----VRYMDGGFSD  162 (245)
T ss_pred             chHHHHHHHhcCCCcccCCCCeEEC--------C----EEEEcCcccC
Confidence            46899999999999995  444442        2    2689999988

Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.

>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family

Probab=95.52  E-value=0.0069  Score=51.28  Aligned_cols=33  Identities=21%  Similarity=0.212  Sum_probs=26.6

Q ss_pred             ChhhhhhhcCCCCCCC--CceeeeccCcCcCCCcceeeeccccceee
Q 041075           12 FPSDISTGSSPAPTYV--PGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        12 ~l~DVa~ATSAAPTYF--Pp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .|.|+.+|||+.|.||  .|..+.        |    ..+|||||..
T Consensus       129 ~Li~Al~AS~~iP~~~g~~P~~~~--------G----~~~vDGGv~~  163 (243)
T cd07204         129 ELIQALVCSCFIPFYCGLIPPKFR--------G----VRYIDGGLSD  163 (243)
T ss_pred             HHHHHHHHhccCCcccCCCCeEEC--------C----EEEEeCCccc
Confidence            5789999999999995  566553        2    2789999988

Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.

>cd07224 Pat_like Patatin-like phospholipase

Probab=95.50  E-value=0.0068  Score=50.96  Aligned_cols=33  Identities=24%  Similarity=0.168  Sum_probs=26.6

Q ss_pred             ChhhhhhhcCCCCCCCCc---eeeeccCcCcCCCcceeeeccccceee
Q 041075           12 FPSDISTGSSPAPTYVPG---SRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        12 ~l~DVa~ATSAAPTYFPp---~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .+.|+.+|||+-|.||+|   ..+.        |    ..+||||+..
T Consensus       124 ~l~~al~AS~~iP~~~~p~~~v~~~--------G----~~~vDGG~~~  159 (233)
T cd07224         124 DLIDALLASCNIPGYLAPWPATMFR--------G----KLCVDGGFAL  159 (233)
T ss_pred             hHHHHHHHhccCCcccCCCCCeeEC--------C----EEEEeCCccc
Confidence            488999999999999975   4442        2    3799999877

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.

>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3

Probab=95.02  E-value=0.012  Score=50.31  Aligned_cols=34  Identities=21%  Similarity=0.198  Sum_probs=26.3

Q ss_pred             CChhhhhhhcCCCCCCC--CceeeeccCcCcCCCcceeeeccccceee
Q 041075           11 AFPSDISTGSSPAPTYV--PGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        11 ~~l~DVa~ATSAAPTYF--Pp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      -.+.|+++||||-|.|+  .|..+.        |    ..+||||+..
T Consensus       129 ~~l~~av~AS~siP~~~g~~P~~~~--------G----~~yvDGGv~d  164 (252)
T cd07221         129 DEVVDALVCSCFIPFFSGLIPPSFR--------G----VRYVDGGVSD  164 (252)
T ss_pred             hHHHHHHHHHccCccccCCCCeEEC--------C----EEEEeCCccc
Confidence            46899999999999994  454442        2    2699999987

PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.

>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=94.34  E-value=0.022  Score=49.39  Aligned_cols=33  Identities=15%  Similarity=0.134  Sum_probs=29.5

Q ss_pred             ChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           12 FPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        12 ~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .++++++||+|=|.+|||..+..            +.++|||+..
T Consensus       146 ~~~~av~AS~siP~vF~Pv~i~~------------~~~vDGg~~~  178 (306)
T COG1752         146 SLAEAVRASCSIPGVFPPVEIDG------------RLLVDGGVLN  178 (306)
T ss_pred             cHHHHHHHhcccCccCCCEEECC------------EEEEecCccC
Confidence            39999999999999999998843            3799999999

>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]

Probab=93.68  E-value=0.038  Score=48.36  Aligned_cols=33  Identities=27%  Similarity=0.320  Sum_probs=26.1

Q ss_pred             ChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           12 FPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        12 ~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      -.-||.|||||-|-|=++..+..            +.++|||+..
T Consensus       141 ~~m~viRASSaiPf~~~~V~i~G------------~~YlDGGIsd  173 (292)
T COG4667         141 NWLDVIRASSAIPFYSEGVEING------------KNYLDGGISD  173 (292)
T ss_pred             HHHHHHHHhccCCCCCCCeEECC------------EecccCcccc
Confidence            34599999999995557777743            3799999988

>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase

Probab=93.37  E-value=0.051  Score=48.44  Aligned_cols=46  Identities=13%  Similarity=0.112  Sum_probs=35.4

Q ss_pred             CCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceee----------eccccceee
Q 041075            8 SKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSF----------TYADHGQAS   56 (181)
Q Consensus         8 ~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~----------~lIDGGv~A   56 (181)
                      +-|+.+|.+++||+|-|..|+|..+-..   |.+|+...|          .++||++..
T Consensus       166 ~Pnv~I~sAv~aS~a~P~if~~~~L~~K---d~~G~ivp~~~~~~~~~~~~~~DGs~~~  221 (323)
T cd07231         166 SPHVVIWSAVAASCAFPGLFEAQELMAK---DRFGEIVPYHPPGKVSSPRRWRDGSLEQ  221 (323)
T ss_pred             CCCcHHHHHHHHHcCChhhccceeEEEE---CCCCCEeeccCCCccccccccccCcccc
Confidence            4578899999999999999999987766   445765444          377877655

Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.

>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases

Probab=93.24  E-value=0.038  Score=43.41  Aligned_cols=46  Identities=13%  Similarity=0.001  Sum_probs=29.6

Q ss_pred             CChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075           11 AFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        11 ~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      -.++++++|+++-|.+|++............++.+...+||||+..
T Consensus        90 ~~~~~av~aS~s~P~~f~~v~~~~~~~~~~~~~~~g~~lVDGG~~~  135 (155)
T cd01819          90 EELIRALFASGSWPSYFGLIPPAELYTSKSNLKEKGVRLVDGGVSN  135 (155)
T ss_pred             hHHHHHHhHHhhhhhhcCCcccccccccccccccCCeEEeccceec
Confidence            3578999999999999997654111000001112356899999876

Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.

>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1

Probab=92.25  E-value=0.084  Score=48.10  Aligned_cols=35  Identities=20%  Similarity=0.181  Sum_probs=26.8

Q ss_pred             CCChhhhhhhcCCCCCCCC--ceeeeccCcCcCCCcceeeeccccceee
Q 041075           10 DAFPSDISTGSSPAPTYVP--GSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        10 d~~l~DVa~ATSAAPTYFP--p~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      +-.|.|+++||++.|.||.  |..+.        |    ..+||||+..
T Consensus       140 ~~dLidAV~AScaIP~y~G~~Pp~ir--------G----~~yVDGGvsd  176 (382)
T cd07219         140 KEELIEALYCSCFVPVYCGLIPPTYR--------G----VRYIDGGFTG  176 (382)
T ss_pred             cchHHHHHHHHccCccccCCcCeEEC--------C----EEEEcCCccC
Confidence            4578999999999999962  33442        2    2589999999

Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.

>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2

Probab=91.95  E-value=0.087  Score=45.06  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=25.4

Q ss_pred             CChhhhhhhcCCCCCCCC--ceeeeccCcCcCCCcceeeeccccceee
Q 041075           11 AFPSDISTGSSPAPTYVP--GSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        11 ~~l~DVa~ATSAAPTYFP--p~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      -.|.|+.+|||+.|.|+.  |..+.        |    ..+||||+..
T Consensus       133 ~dLi~al~AScsiP~~~g~~P~~~~--------G----~~yvDGGvsd  168 (249)
T cd07220         133 EELIQALVCSCFIPVYCGLIPPTLR--------G----VRYVDGGISD  168 (249)
T ss_pred             chHHHHHHHhccCccccCCCCeeEC--------C----EEEEcCCccc
Confidence            357899999999998852  33342        2    2699999887

PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.

>TIGR03607 patatin-related protein

Probab=82.90  E-value=0.84  Score=44.98  Aligned_cols=23  Identities=22%  Similarity=0.200  Sum_probs=20.8

Q ss_pred             CCChhhhhhhcCCCCCCCCceee
Q 041075           10 DAFPSDISTGSSPAPTYVPGSRL   32 (181)
Q Consensus        10 d~~l~DVa~ATSAAPTYFPp~~~   32 (181)
                      .+.|..+||+||+=|.+|||.++
T Consensus       214 ~~~lA~AaRaSaSfP~aF~Pv~l  236 (739)
T TIGR03607       214 APRLAFAARATASFPGAFPPSRL  236 (739)
T ss_pred             cHHHHHHHHHhcCCCcccCceeh
Confidence            37899999999999999999965

This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.

>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5

Probab=80.37  E-value=0.92  Score=41.69  Aligned_cols=33  Identities=15%  Similarity=0.079  Sum_probs=26.7

Q ss_pred             ChhhhhhhcCCCCCC--CCceeeeccCcCcCCCcceeeeccccceee
Q 041075           12 FPSDISTGSSPAPTY--VPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus        12 ~l~DVa~ATSAAPTY--FPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      -|.|+.+||+.-|.|  |.|..+.        |    ..+||||+.-
T Consensus       139 dLIqALlASc~IP~y~g~~P~~~r--------G----~~yVDGGvsn  173 (405)
T cd07223         139 ELIQALICTLYFPFYCGIIPPEFR--------G----ERYIDGALSN  173 (405)
T ss_pred             HHHHHHHHhccCccccCCCCceEC--------C----EEEEcCcccc
Confidence            478999999999999  7666663        3    1589999887

PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	181
1oxw_A	373	The Crystal Structure Of Semet Patatin Length = 373		6e-08

>pdb|1OXW|A Chain A, The Crystal Structure Of Semet Patatin Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 95  FRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAKIGERLLKKPVSR 144
           F+++ S+NNYLR Q+N+L+G     D A E   + L ++GE LLKKPVS 
Sbjct: 294 FQALDSKNNYLRVQENALTGTTTEXDDASEANXELLVQVGENLLKKPVSE 343

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	181
1oxw_A	373	Patatin; alpha/beta class fold with approximately	2e-10

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3 Length = 373

 Score = 57.2 bits (137), Expect = 2e-10
 Identities = 43/192 (22%), Positives = 67/192 (34%), Gaps = 53/192 (27%)

Query: 2   QAKSNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHG-------- 53
              ++   DA   DIS  ++ APTY P    +        G    F   D          
Sbjct: 156 NLANSPELDAKMYDISYSTAAAPTYFPPHYFVT---NTSNGDEYEFNLVDGAVATVADPA 212

Query: 54  -----------------------------------------QASWVVGISSTMWEVPGNS 72
                                                      ++    ++T   V    
Sbjct: 213 LLSISVATRLAQKDPAFASIRSLNYKKMLLLSLGTGTTSEFDKTYTAKEAATWTAVHWML 272

Query: 73  PLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELAK 132
            +  + ++A   M    +S   F+++ S+NNYLR Q+N+L+G     D A E  M+ L +
Sbjct: 273 VIQKMTDAASSYMTDYYLS-TAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQ 331

Query: 133 IGERLLKKPVSR 144
           +GE LLKKPVS 
Sbjct: 332 VGENLLKKPVSE 343

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
1oxw_A	373	Patatin; alpha/beta class fold with approximately	99.97
4akf_A	577	VIPD; transferase; 2.90A {Legionella pneumophila}	97.71
3tu3_B	711	EXOU; type III secretion system, SPC infectious di	97.0

>1oxw_A Patatin; alpha/beta class fold with approximately three layers; 2.20A {Solanum cardiophyllum} SCOP: c.19.1.3

Probab=99.97  E-value=6.4e-32  Score=238.70  Aligned_cols=151  Identities=30%  Similarity=0.409  Sum_probs=130.6

Q ss_pred             CCCCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee-----------------------------
Q 041075            6 NASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS-----------------------------   56 (181)
Q Consensus         6 ~~~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A-----------------------------   56 (181)
                      ++..++++||||+||||+|+||||+.+...   +.+|+.+++.||||||++                             
T Consensus       160 ~~~~~~~l~~av~ASsA~P~~F~p~~i~~~---d~~G~~~~~~~vDGGv~~~NnP~~~a~~ea~~~~~~~~~~~~~~~~~  236 (373)
T 1oxw_A          160 SPELDAKMYDISYSTAAAPTYFPPHYFVTN---TSNGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSLN  236 (373)
T ss_dssp             CGGGCCBHHHHHHHHHCCTTTSCCEEEEEE---CTTSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHTTTCGGGTTSTTCC
T ss_pred             CCccCchHHHHHHHHccCCcCcCcEEeecc---CCCCcccceeeecCcccccCChHHHHHHHHHHHhccCcccccccccc
Confidence            345688999999999999999999999754   223544567999999987                             


Q ss_pred             ------eEeccCC-------------CCCCC-CCchHHHHHHHHhhHHhhhhhhhhhhhhhcCCCCceEEeecCCCCCCC
Q 041075           57 ------WVVGISS-------------TMWEV-PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDA  116 (181)
Q Consensus        57 ------lvlGTG~-------------~~Wg~-~~~~pLidi~~~a~s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~~  116 (181)
                            ++||||.             .+||. +|..||++++|+++++++|++++ ++|+.+.++++|+|||++.++...
T Consensus       237 ~~~~~vvSlGTG~~~~~~~~~~~~~~~~wG~~~w~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~~~~Y~Ri~~~~l~~~~  315 (373)
T 1oxw_A          237 YKKMLLLSLGTGTTSEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLS-TAFQALDSKNNYLRVQENALTGTT  315 (373)
T ss_dssp             GGGEEEEEECCCCBCTTSSCCCHHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHH-HHHHHTTCGGGEEEECCCCBCGGG
T ss_pred             cCceEEEEecCCCCCCcccccChhhhhhhhhHhHHHHHHHHHHHhhHHHHHHHHH-HHhhccCCCCcEEEEeCCCCCCcc
Confidence                  2239997             36888 89999999999999999999999 999877778899999985477777


Q ss_pred             CccccccHHHHHHHHHHHHHHhcCCCCccccccceeecCCCCChHHHHHHHHhh
Q 041075          117 PSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLST  170 (181)
Q Consensus       117 ~~mDdas~~nl~~L~~~a~~ll~~~~~~~~~~~~~~~~~~~~tn~~~l~~~~~~  170 (181)
                      .+||+++++||+.|+++|++++++++.++|++|          |+++|++||+-
T Consensus       316 ~~lD~~~~~~l~~L~~~~~~~l~~~~~~~~~~t----------n~~~l~~~a~~  359 (373)
T 1oxw_A          316 TEMDDASEANMELLVQVGENLLKKPVSEDNPET----------YEEALKRFAKL  359 (373)
T ss_dssp             GCTTCCCHHHHHHHHHHHHHHHTSBSSSSCCCB----------HHHHHHHHHHH
T ss_pred             cccccCCHHHHHHHHHHHHHHHhcccccccchh----------HHHHHHHHHHH
Confidence            799999999999999999999999999998864          99999999974

>4akf_A VIPD; transferase; 2.90A {Legionella pneumophila}

Probab=97.71  E-value=9e-06  Score=75.44  Aligned_cols=36  Identities=19%  Similarity=0.121  Sum_probs=30.7

Q ss_pred             CCCChhhhhhhcCCCCCCCCcee-eeccCcCcCCCcceeeeccccceee
Q 041075            9 KDAFPSDISTGSSPAPTYVPGSR-LINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus         9 ~d~~l~DVa~ATSAAPTYFPp~~-~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .++.++|++|||||+|+||||+. +.        |    ..|+|||+++
T Consensus       259 ~d~~l~dAVRASsAlP~~F~PV~~Id--------G----~~yvDGGV~~  295 (577)
T 4akf_A          259 PQQSIAQVVQWSGAHPVLFVPGRNAK--------G----EYIADGGILD  295 (577)
T ss_dssp             TTSBHHHHHHHHTCCTTTBCCEECTT--------C----CEEECTTSSS
T ss_pred             CCCCHHHHHHHHhCccccccCEEeEC--------C----EEEECCCccc
Confidence            46789999999999999999984 42        2    3899999999

>3tu3_B EXOU; type III secretion system, SPC infectious diseases, structural genomics, center for struct genomics of infectious diseases, csgid; 1.92A {Pseudomonas aeruginosa} PDB: 4akx_B*

Probab=97.00  E-value=0.00013  Score=68.84  Aligned_cols=45  Identities=16%  Similarity=0.077  Sum_probs=15.7

Q ss_pred             CCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee
Q 041075            9 KDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS   56 (181)
Q Consensus         9 ~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A   56 (181)
                      .+++++|+++||+|+|+||||+.+.... =. .+ .....|+|||+..
T Consensus       329 Pd~~I~dAVRASsSlP~vF~PV~I~G~~-f~-~~-~e~~~YVDGGIsd  373 (711)
T 3tu3_B          329 PDLEVAQAAHISGSFPGVFQKVSLSDQP-YQ-AG-VEWTEFQDGGVMI  373 (711)
T ss_dssp             TTSBHHHHHHHHHHCC-------------------------------C
T ss_pred             CCchHHHHHHHHhcccccCCCEEECCcc-cc-cc-ccCceEeecCcCC
Confidence            4788999999999999999999775320 00 00 0123799999999

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	181
d1oxwa_	360	c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solan	5e-11

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]} Length = 360

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

 Score = 58.1 bits (139), Expect = 5e-11
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 72  SPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGDAPSTDKAIEKEMQELA 131
             +  + ++A   M    +S   F+++ S+NNYLR Q+N+L+G     D A E  M+ L 
Sbjct: 261 LVIQKMTDAASSYMTDYYLS-TAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLV 319

Query: 132 KIGERLLKKPVSR 144
           ++GE LLKKPVS 
Sbjct: 320 QVGENLLKKPVSE 332

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d1oxwa_	360	Patatin {Heartleaf nightshade (Solanum cardiophyll	99.93

>d1oxwa_ c.19.1.3 (A:) Patatin {Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]}

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: Patatin
domain: Patatin
species: Heartleaf nightshade (Solanum cardiophyllum) [TaxId: 160510]

Probab=99.93  E-value=4.2e-26  Score=193.69  Aligned_cols=152  Identities=30%  Similarity=0.410  Sum_probs=125.8

Q ss_pred             cCCCCCCChhhhhhhcCCCCCCCCceeeeccCcCcCCCcceeeeccccceee----------------------------
Q 041075            5 SNASKDAFPSDISTGSSPAPTYVPGSRLINLKPKIQEGVTQSFTYADHGQAS----------------------------   56 (181)
Q Consensus         5 ~~~~~d~~l~DVa~ATSAAPTYFPp~~~~~~~~~~~~g~~~~~~lIDGGv~A----------------------------   56 (181)
                      .++..+++||||++||||+|+||||+.+....+   .|....+.+||||+++                            
T Consensus       148 ~~~~~~~~l~~a~~ASsA~P~~F~p~~~~~~~~---~~~~~~~~~~Dgg~~~~nnp~~~a~~e~~~l~~~~~~~~~~~~~  224 (360)
T d1oxwa_         148 NSPELDAKMYDISYSTAAAPTYFPPHYFVTNTS---NGDEYEFNLVDGAVATVADPALLSISVATRLAQKDPAFASIRSL  224 (360)
T ss_dssp             TCGGGCCBHHHHHHHHHCCTTTSCCEEEEEECT---TSCEEEEEEEEGGGGTCSSCHHHHHHHHHHHTTTCGGGTTSTTC
T ss_pred             cCCcccchHHHhhhhhhcCCCCCCCEEEecccC---CCCceeEEecccchhhccCchHHHHHHHHHhcccCccccccccC
Confidence            345568999999999999999999999986521   2333577899999976                            


Q ss_pred             -------eEeccCC-------------CCCCC-CCchHHHHHHHHhhHHhhhhhhhhhhhhhcCCCCceEEeecCCCCCC
Q 041075           57 -------WVVGISS-------------TMWEV-PGNSPLVDLFNSAGRDMIHVPMSFDFFRSIASENNYLRFQDNSLSGD  115 (181)
Q Consensus        57 -------lvlGTG~-------------~~Wg~-~~~~pLidi~~~a~s~~vd~~l~~~l~~~~~~~~~YlRIq~~~l~~~  115 (181)
                             +++|||.             ..||. +|..++.++++.++.+++++++. ++++....+++|+|||++.+...
T Consensus       225 ~~~~~~~~s~gtg~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~R~~~~~~~~~  303 (360)
T d1oxwa_         225 NYKKMLLLSLGTGTTSEFDKTYTAKEAATWTAVHWMLVIQKMTDAASSYMTDYYLS-TAFQALDSKNNYLRVQENALTGT  303 (360)
T ss_dssp             CGGGEEEEEECCCCBCTTSSCCCHHHHTTCCHHHHHTTHHHHHHHHHHHHHHHHHH-HHHHHTTCGGGEEEECCCCBCGG
T ss_pred             CccceeeeccccccccccccccchhhhhhcchHhHHHHHHHHHHhhhHHHHHHHHH-HHHHhcCCCCcEEEEcCCccccc
Confidence                   2338887             45887 88899999999999999999999 99987777789999998755555


Q ss_pred             CCccccccHHHHHHHHHHHHHHhcCCCCccccccceeecCCCCChHHHHHHHHhh
Q 041075          116 APSTDKAIEKEMQELAKIGERLLKKPVSRPVYAMRRIIHSGLCSNSMILALVLST  170 (181)
Q Consensus       116 ~~~mDdas~~nl~~L~~~a~~ll~~~~~~~~~~~~~~~~~~~~tn~~~l~~~~~~  170 (181)
                      ...|||+|+++|+.|.++|+++++++..+.+          ..||+++|++||+.
T Consensus       304 ~~~lDd~s~~~l~~l~~~g~~~~~~~~~~~~----------~~~~~~~L~~~~~~  348 (360)
T d1oxwa_         304 TTEMDDASEANMELLVQVGENLLKKPVSEDN----------PETYEEALKRFAKL  348 (360)
T ss_dssp             GGCTTCCCHHHHHHHHHHHHHHHTSBSSSSC----------CCBHHHHHHHHHHH
T ss_pred             cccccCCCHHHHHHHHHHHHHHHhhhhhhhh----------hhHHHHHHHHHHHH
Confidence            6689999999999999999999999766533          35899999999964