Citrus Sinensis ID: 041139

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
Protein Sequence
SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFVIT
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEcccccccccccccccccccccccEEccEEEEEEcccccccccEEEEcccccccccEEEEEEEEEEEEEcccccEEEEEEEEEEEEcccccccccccccccccccccccccccEEEEEEEEcccEEEEEcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
ccEccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHccccEEEEEEcHHHHHHcccccccccccccccEEEcEEEEEEEccccEEEEEEEEEEccccccccEEEEEEEEEEEEEccccEEEEEEEEEEEccHHHccccccccccccccccccccccccEEEEEEEEccccEEEcccccEEEEEEEc
Coil and Loop (DISEMBL)
savsglnrglaantDDLQKADAAAKELEavggpvdlsvgLDRLQGKWRLLYSSAFssrtlggnrpgpptgrllpitlgqvFQRIDILSkdfdniaelelgvpwplppveVTATLAHKFELIGSSNIKIIFEKttvkttgnlsqlpplelprfpdalrppsdtrsgefevtyldndtritrgdrAELRVFVIT
Flexible Loop (DISEMBL)
savsglnrglaantDDLQKADAAAKELEavggpvdlsvGLDRLQGKWRLLYSSAfssrtlggnrpgppTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTvkttgnlsqlpplelprfpdalrppsdtrsgefevtyldndtritrgdraelrvfvit
Low Complexity Region (SEG)
SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFVIT
Disordered region (IsUnstruct)
****************************AVGGPVDLSVGLDRLQGKWRLLYSSAFS*************GRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTG*****************************VTYLDNDTRITRGDRAELRVFV**
Disordered Region (DISOPRED)
*AVSGLNRGLAA*TDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFS***********PTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDAL*P**DTRSGEFEVTYLDNDTRITRGDRAELRVFVIT
Disordered Region (DISEMBL)
SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFVIT
Disordered Region (DISPRO)
*****LNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFVIT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVFVIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	192	2.2.26 [Sep-21-2011]
Q9LW57	284	Probable plastid-lipid-as	yes	no	0.973	0.658	0.737	6e-80
Q8W4F1	284	Probable plastid-lipid-as	no	no	0.880	0.595	0.275	2e-05
Q9LU85	242	Probable plastid-lipid-as	no	no	0.786	0.623	0.244	3e-05
Q5M755	273	Probable plastid-lipid-as	no	no	0.906	0.637	0.240	0.0002

>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1

 Score =  296 bits (758), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 138/187 (73%), Positives = 163/187 (87%)

Query: 5   GLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNR 64
           GLNRGL A+ DDL++A+ AAKELE  GGPVDL+  LD+LQGKWRLLYSSAFSSR+LGG+R
Sbjct: 97  GLNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGGSR 156

Query: 65  PGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSS 124
           PG PTGRL+P+TLGQVFQRID+ SKDFDNIAE+ELG PWP PP+E TATLAHKFEL+G+ 
Sbjct: 157 PGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLGTC 216

Query: 125 NIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRA 184
            IKI FEKTTVKT+GNLSQ+PP ++PR PD+ RP S+  +G+FEVTY+D+  RITRGDR 
Sbjct: 217 KIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPGTGDFEVTYVDDTMRITRGDRG 276

Query: 185 ELRVFVI 191
           ELRVFVI
Sbjct: 277 ELRVFVI 283

Arabidopsis thaliana (taxid: 3702)

>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 38/207 (18%)

Query: 2   AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLS-VGLDRLQGKWRLLYSSAFSSRTL 60
           AV    RGL A +D     + A   +E   G  ++  V LD   G WRL Y+SA     L
Sbjct: 70  AVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDPVKLD---GTWRLQYTSAPDVVVL 126

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPV-----EVTATLA 115
                     RL    +GQVFQ+ +   +D  +   +   V W LP +       T  + 
Sbjct: 127 F-----EAASRLPFFQVGQVFQKFE--CRDRSDGGIIRNVVQWSLPSLLEEQEGATLVVT 179

Query: 116 HKFELIGSSNIKIIFEKTTVKTTGNLSQL----PPLELPR-----------------FP- 153
            KF+ + S NI + FE+ +V+      QL     P  LPR                  P 
Sbjct: 180 AKFDKVSSRNIYLQFEEISVRNININEQLQALIAPAILPRSFLSLQLLQFIRTFKAQIPV 239

Query: 154 DALRPPSDTRSGEFEVTYLDNDTRITR 180
           +A  P   +  G + ++YLDN+  + R
Sbjct: 240 NATSPGRRSVGGLYYLSYLDNNMLLGR 266

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1

 Score = 48.1 bits (113), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 37/188 (19%)

Query: 2   AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
           A+  L RG  A+ DD  + D  A+++EAV  P    +  D + GKW L+Y++  S+  L 
Sbjct: 81  AIEPLERGATASPDDQLRIDQLARKVEAV-NPTKEPLKSDLVNGKWELIYTT--SASILQ 137

Query: 62  GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
             +P     R L       +Q I++ +    N+        WP        ++    + +
Sbjct: 138 AKKP-----RFLRSITN--YQSINVDTLKVQNMET------WPF-----YNSVTGDIKPL 179

Query: 122 GSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRG 181
            S  + +  +    K  G +    P++ P          D+  GE E+TY+D + R++RG
Sbjct: 180 NSKKVAVKLQ--VFKILGFI----PIKAP----------DSARGELEITYVDEELRLSRG 223

Query: 182 DRAELRVF 189
           D+  L + 
Sbjct: 224 DKGNLFIL 231

Arabidopsis thaliana (taxid: 3702)

>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 17/191 (8%)

Query: 2   AVSGLNRGL-AANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
           A+ G+NRG+    +D   + +   K LE      + +  LD++ G W+L+YS+      L
Sbjct: 93  ALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLIYSTI---TVL 149

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
           G  R     G    ++LG + Q+IDI      ++ + ++     L  ++    +   F++
Sbjct: 150 GSKRT--KLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDV---RGLNLLDGEFRIVASFKI 204

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
              S+++I +E +T+K    L  +    +        P      G FE++YLD D ++ R
Sbjct: 205 SSKSSVEITYESSTIKPD-QLMNIFRKNMDLLLGIFNP-----EGLFEISYLDEDLQVGR 258

Query: 181 GDRAELRVFVI 191
             +    VFV+
Sbjct: 259 DGKGN--VFVL 267

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
38679311	285	harpin binding protein 1 [Citrus x parad	1.0	0.673	0.989	1e-103
449432530	289	PREDICTED: probable plastid-lipid-associ	1.0	0.664	0.869	3e-93
449486695	289	PREDICTED: probable plastid-lipid-associ	1.0	0.664	0.869	4e-93
38679335	291	harpin binding protein 1 [Vitis sp. NL-2	0.989	0.652	0.857	6e-90
351725151	265	harpin binding protein 1 [Glycine max] g	0.994	0.720	0.858	7e-90
225433191	293	PREDICTED: probable plastid-lipid-associ	0.989	0.648	0.852	2e-89
350535623	276	harpin binding protein 1 [Solanum lycope	1.0	0.695	0.828	2e-89
255575855	285	structural molecule, putative [Ricinus c	0.994	0.670	0.848	3e-89
147833017	296	hypothetical protein VITISV_002805 [Viti	0.984	0.638	0.851	6e-89
38679337	292	harpin binding protein 1 [Vitis sp. NL-2	0.984	0.647	0.851	6e-89

>gi|38679311|gb|AAR26477.1| harpin binding protein 1 [Citrus x paradisi]

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/192 (98%), Positives = 190/192 (98%)

Query: 1   SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
           SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL
Sbjct: 94  SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 153

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
           GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL
Sbjct: 154 GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 213

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
           IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALR PSDTRSGEFEVTYLDNDTRITR
Sbjct: 214 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRRPSDTRSGEFEVTYLDNDTRITR 273

Query: 181 GDRAELRVFVIT 192
           GDR ELRVFVIT
Sbjct: 274 GDRGELRVFVIT 285

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432530|ref|XP_004134052.1| PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic-like [Cucumis sativus]

 Score =  346 bits (887), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 167/192 (86%), Positives = 181/192 (94%)

Query: 1   SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
           +AVSGLNRGLAA+ DDLQKAD AAKE+EAVGGPVDLSV LD+LQG+W+L+YSSAFSSRTL
Sbjct: 98  TAVSGLNRGLAADEDDLQKADEAAKEIEAVGGPVDLSVDLDKLQGRWKLIYSSAFSSRTL 157

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
           GG+RPGPPTGRLLPITLGQVFQRIDI+SKDFDNI ELELG PWPLPP EVTATLAHKFE+
Sbjct: 158 GGSRPGPPTGRLLPITLGQVFQRIDIISKDFDNIVELELGAPWPLPPAEVTATLAHKFEI 217

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
           IGS+ IKIIFEKTTVKTTGNLSQLPPLE+PR PDALRPPS+T SGEFEVTYLDND RITR
Sbjct: 218 IGSAKIKIIFEKTTVKTTGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDNDIRITR 277

Query: 181 GDRAELRVFVIT 192
           GDR ELRVFVI+
Sbjct: 278 GDRGELRVFVIS 289

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449486695|ref|XP_004157371.1| PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic-like [Cucumis sativus]

 Score =  345 bits (886), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 167/192 (86%), Positives = 181/192 (94%)

Query: 1   SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
           +AVSGLNRGLAA+ DDLQKAD AAKE+EAVGGPVDLSV LD+LQG+W+L+YSSAFSSRTL
Sbjct: 98  TAVSGLNRGLAADEDDLQKADEAAKEIEAVGGPVDLSVDLDKLQGRWKLIYSSAFSSRTL 157

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
           GG+RPGPPTGRLLPITLGQVFQRIDI+SKDFDNI ELELG PWPLPP EVTATLAHKFE+
Sbjct: 158 GGSRPGPPTGRLLPITLGQVFQRIDIISKDFDNIVELELGAPWPLPPAEVTATLAHKFEI 217

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
           IGS+ IKIIFEKTTVKTTGNLSQLPPLE+PR PDALRPPS+T SGEFEVTYLDND RITR
Sbjct: 218 IGSAKIKIIFEKTTVKTTGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDNDIRITR 277

Query: 181 GDRAELRVFVIT 192
           GDR ELRVFVI+
Sbjct: 278 GDRGELRVFVIS 289

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38679335|gb|AAR26489.1| harpin binding protein 1 [Vitis sp. NL-2003]

 Score =  335 bits (859), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 163/190 (85%), Positives = 179/190 (94%)

Query: 2   AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
           AVSGLNRGLAA  DDLQKADAAAKELEA GG VDLS+ LD+LQG+W+L+YSSAFSSRTLG
Sbjct: 101 AVSGLNRGLAAIEDDLQKADAAAKELEAAGGTVDLSIDLDKLQGRWKLIYSSAFSSRTLG 160

Query: 62  GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
           G+RPGPPTGRLLPITLGQVFQRIDI+SKDFDNI +L++GVPWPLPP+E+TATLAHKFELI
Sbjct: 161 GSRPGPPTGRLLPITLGQVFQRIDIVSKDFDNIVDLQIGVPWPLPPIELTATLAHKFELI 220

Query: 122 GSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRG 181
           G+S+IKI FEKTTVKTTGNLSQLPPLE+PR PDALRPPS+T SGEFEVTYLD DTRITRG
Sbjct: 221 GTSSIKITFEKTTVKTTGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDADTRITRG 280

Query: 182 DRAELRVFVI 191
           DR ELRVFVI
Sbjct: 281 DRGELRVFVI 290

Source: Vitis sp. NL-2003

Species: Vitis sp. NL-2003

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725151|ref|NP_001238106.1| harpin binding protein 1 [Glycine max] gi|38679315|gb|AAR26479.1| harpin binding protein 1 [Glycine max]

 Score =  335 bits (858), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 164/191 (85%), Positives = 177/191 (92%)

Query: 1   SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
           SAVSGLNRGLAA+ DDL+KAD AAKELEA GG VDLS+GLD LQG+W+L+YSSAFSSRTL
Sbjct: 74  SAVSGLNRGLAASEDDLRKADDAAKELEAAGGLVDLSLGLDNLQGRWKLIYSSAFSSRTL 133

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
           GG+RPGPP GRLLPITLGQVFQRIDILSKDFDNI EL+LG PWPLPP+E TATLAHKFEL
Sbjct: 134 GGSRPGPPIGRLLPITLGQVFQRIDILSKDFDNIVELQLGAPWPLPPLEATATLAHKFEL 193

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
           IGSS IKI+FEKTTVKT GNLSQLPPLE+PR PDALRPPS+T SGEFEVTYLD+DTRITR
Sbjct: 194 IGSSKIKIVFEKTTVKTAGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDSDTRITR 253

Query: 181 GDRAELRVFVI 191
           GDR ELRVFVI
Sbjct: 254 GDRGELRVFVI 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433191|ref|XP_002285326.1| PREDICTED: probable plastid-lipid-associated protein 6, chloroplastic [Vitis vinifera] gi|296083683|emb|CBI23672.3| unnamed protein product [Vitis vinifera]

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 162/190 (85%), Positives = 178/190 (93%)

Query: 2   AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
           AVSGLNRGLAA  DDLQKADAAAKELEA GG VDLS+ LD+LQG+W+L+YSSAFSSRTLG
Sbjct: 103 AVSGLNRGLAAIEDDLQKADAAAKELEAAGGTVDLSIDLDKLQGRWKLIYSSAFSSRTLG 162

Query: 62  GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELI 121
           G+RPGPPTGRLLPITLGQVFQRIDI+SKDFDNI +L++G PWPLPP+E+TATLAHKFELI
Sbjct: 163 GSRPGPPTGRLLPITLGQVFQRIDIVSKDFDNIVDLQIGAPWPLPPIELTATLAHKFELI 222

Query: 122 GSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRG 181
           G+S+IKI FEKTTVKTTGNLSQLPPLE+PR PDALRPPS+T SGEFEVTYLD DTRITRG
Sbjct: 223 GTSSIKITFEKTTVKTTGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDADTRITRG 282

Query: 182 DRAELRVFVI 191
           DR ELRVFVI
Sbjct: 283 DRGELRVFVI 292

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350535623|ref|NP_001234460.1| harpin binding protein 1 [Solanum lycopersicum] gi|38679319|gb|AAR26481.1| harpin binding protein 1 [Solanum lycopersicum]

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 159/192 (82%), Positives = 175/192 (91%)

Query: 1   SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
           SAVSGLNRGLAA+ DDL+KAD AAKELE+  G VDL+  LD+LQG+W+L+YSSAFSSRTL
Sbjct: 85  SAVSGLNRGLAASEDDLKKADEAAKELESCAGAVDLAADLDKLQGRWKLIYSSAFSSRTL 144

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
           GG+RPGPPTGRLLPITLGQVFQRID+LSKDFDNI ELELG PWP PPVE TATLAHKFEL
Sbjct: 145 GGSRPGPPTGRLLPITLGQVFQRIDVLSKDFDNIVELELGAPWPFPPVEATATLAHKFEL 204

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
           IGSS IKIIFEKTTVKTTGNLSQLPPLE+PR PD  RPPS+T SGEFEVTY+D+DTR+TR
Sbjct: 205 IGSSTIKIIFEKTTVKTTGNLSQLPPLEVPRIPDQFRPPSNTGSGEFEVTYIDSDTRVTR 264

Query: 181 GDRAELRVFVIT 192
           GDR ELRVFVI+
Sbjct: 265 GDRGELRVFVIS 276

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575855|ref|XP_002528825.1| structural molecule, putative [Ricinus communis] gi|223531737|gb|EEF33559.1| structural molecule, putative [Ricinus communis]

 Score =  332 bits (852), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 162/191 (84%), Positives = 178/191 (93%)

Query: 1   SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
           S VSGLNRGLAA+ DDLQKADAAAKELEAVGG VDLS  +D+LQG+W+L+YSSAFSSRTL
Sbjct: 94  SIVSGLNRGLAASEDDLQKADAAAKELEAVGGLVDLSNDIDKLQGRWKLIYSSAFSSRTL 153

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
           GG+RPGPPTGRLLPITLGQVFQRID+L+KDFDNI EL+LG PWPLPPVEVTATLAHKFEL
Sbjct: 154 GGSRPGPPTGRLLPITLGQVFQRIDVLNKDFDNIVELQLGAPWPLPPVEVTATLAHKFEL 213

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
           IGS+ +KI FEKTTVKTTGNLSQLPPLE+PR PDALRPPS+T SG+FEVTY+D DTRITR
Sbjct: 214 IGSAKVKITFEKTTVKTTGNLSQLPPLEIPRIPDALRPPSNTGSGDFEVTYVDADTRITR 273

Query: 181 GDRAELRVFVI 191
           GDR ELRVFVI
Sbjct: 274 GDRGELRVFVI 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147833017|emb|CAN66121.1| hypothetical protein VITISV_002805 [Vitis vinifera]

 Score =  332 bits (850), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 161/189 (85%), Positives = 177/189 (93%)

Query: 3   VSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGG 62
           VSGLNRGLAA  DDLQKADAAAKELEA GG VDLS+ LD+LQG+W+L+YSSAFSSRTLGG
Sbjct: 107 VSGLNRGLAAIEDDLQKADAAAKELEAAGGTVDLSIDLDKLQGRWKLIYSSAFSSRTLGG 166

Query: 63  NRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIG 122
           +RPGPPTGRLLPITLGQVFQRIDI+SKDFDNI +L++G PWPLPP+E+TATLAHKFELIG
Sbjct: 167 SRPGPPTGRLLPITLGQVFQRIDIVSKDFDNIVDLQIGAPWPLPPIELTATLAHKFELIG 226

Query: 123 SSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGD 182
           +S+IKI FEKTTVKTTGNLSQLPPLE+PR PDALRPPS+T SGEFEVTYLD DTRITRGD
Sbjct: 227 TSSIKITFEKTTVKTTGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDADTRITRGD 286

Query: 183 RAELRVFVI 191
           R ELRVFVI
Sbjct: 287 RGELRVFVI 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38679337|gb|AAR26490.1| harpin binding protein 1 [Vitis sp. NL-2003]

 Score =  332 bits (850), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 161/189 (85%), Positives = 177/189 (93%)

Query: 3   VSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGG 62
           VSGLNRGLAA  DDLQKADAAAKELEA GG VDLS+ LD+LQG+W+L+YSSAFSSRTLGG
Sbjct: 103 VSGLNRGLAAIEDDLQKADAAAKELEAAGGTVDLSIDLDKLQGRWKLIYSSAFSSRTLGG 162

Query: 63  NRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIG 122
           +RPGPPTGRLLPITLGQVFQRIDI+SKDFDNI +L++G PWPLPP+E+TATLAHKFELIG
Sbjct: 163 SRPGPPTGRLLPITLGQVFQRIDIVSKDFDNIVDLQIGAPWPLPPIELTATLAHKFELIG 222

Query: 123 SSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITRGD 182
           +S+IKI FEKTTVKTTGNLSQLPPLE+PR PDALRPPS+T SGEFEVTYLD DTRITRGD
Sbjct: 223 TSSIKITFEKTTVKTTGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDADTRITRGD 282

Query: 183 RAELRVFVI 191
           R ELRVFVI
Sbjct: 283 RGELRVFVI 291

Source: Vitis sp. NL-2003

Species: Vitis sp. NL-2003

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	192
TAIR|locus:2090890	284	FIB4 "fibrillin 4" [Arabidopsi	0.994	0.672	0.738	1.3e-75
TAIR|locus:2092150	242	AT3G26070 [Arabidopsis thalian	0.281	0.223	0.363	9.9e-07
TAIR|locus:2178133	273	AT5G09820 [Arabidopsis thalian	0.901	0.633	0.25	2.1e-06
TAIR|locus:2092165	234	AT3G26080 [Arabidopsis thalian	0.317	0.260	0.343	6.8e-06
TAIR|locus:2041454	284	AT2G46910 [Arabidopsis thalian	0.729	0.492	0.298	2.6e-05

TAIR|locus:2090890 FIB4 "fibrillin 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
 Identities = 141/191 (73%), Positives = 166/191 (86%)

Query:     1 SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
             S VSGLNRGL A+ DDL++A+ AAKELE  GGPVDL+  LD+LQGKWRLLYSSAFSSR+L
Sbjct:    93 SVVSGLNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSL 152

Query:    61 GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
             GG+RPG PTGRL+P+TLGQVFQRID+ SKDFDNIAE+ELG PWP PP+E TATLAHKFEL
Sbjct:   153 GGSRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFEL 212

Query:   121 IGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRITR 180
             +G+  IKI FEKTTVKT+GNLSQ+PP ++PR PD+ RP S+  +G+FEVTY+D+  RITR
Sbjct:   213 LGTCKIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPGTGDFEVTYVDDTMRITR 272

Query:   181 GDRAELRVFVI 191
             GDR ELRVFVI
Sbjct:   273 GDRGELRVFVI 283

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009658 "chloroplast organization" evidence=IMP

GO:0010193 "response to ozone" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2092150 AT3G26070 [Arabidopsis thaliana (taxid:3702)]

 Score = 92 (37.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query:     2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFS 56
             A+  L RG  A+ DD  + D  A+++EAV  P    +  D + GKW L+Y+++ S
Sbjct:    81 AIEPLERGATASPDDQLRIDQLARKVEAVN-PTKEPLKSDLVNGKWELIYTTSAS 134

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2178133 AT5G09820 [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 48/192 (25%), Positives = 87/192 (45%)

Query:     2 AVSGLNRGL-AANTDDLQKADAAAKELEAVGGPVDLSVG-LDRLQGKWRLLYSSAFSSRT 59
             A+ G+NRG+    +D   + +   K LE    P     G LD++ G W+L+YS+      
Sbjct:    93 ALKGINRGIFGVKSDKKTEIEGLVKLLEC-RNPTPEPTGELDKIGGCWKLIYSTI---TV 148

Query:    60 LGGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFE 119
             LG  R     G    ++LG + Q+IDI      ++ + ++     L  ++    +   F+
Sbjct:   149 LGSKRT--KLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVR---GLNLLDGEFRIVASFK 203

Query:   120 LIGSSNIKIIFEKTTVKTTGNLSQLPPLELPRFPDALRPPSDTRSGEFEVTYLDNDTRIT 179
             +   S+++I +E +T+K    L  +    +        P      G FE++YLD D ++ 
Sbjct:   204 ISSKSSVEITYESSTIKPD-QLMNIFRKNMDLLLGIFNP-----EGLFEISYLDEDLQVG 257

Query:   180 RGDRAELRVFVI 191
             R  +    VFV+
Sbjct:   258 RDGKGN--VFVL 267

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

TAIR|locus:2092165 AT3G26080 [Arabidopsis thaliana (taxid:3702)]

 Score = 89 (36.4 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
 Identities = 22/64 (34%), Positives = 34/64 (53%)

Query:     2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
             A+  L RG  A+ DD    D  A+++EAV  P    +  D + GKW L+Y++  S+  L 
Sbjct:    72 AIEPLERGATASPDDQLLIDQLARKVEAVN-PTKEPLKSDLINGKWELIYTT--SAAILQ 128

Query:    62 GNRP 65
               +P
Sbjct:   129 AKKP 132

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2041454 AT2G46910 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
 Identities = 46/154 (29%), Positives = 66/154 (42%)

Query:     2 AVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLG 61
             AV    RGL A +D     + A   +E   G  ++     +L G WRL Y+SA     L 
Sbjct:    70 AVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDPV--KLDGTWRLQYTSAPDVVVLF 127

Query:    62 GNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPV---EVTATLA--H 116
                      RL    +GQVFQ+ +   +    I  +   V W LP +   +  ATL    
Sbjct:   128 -----EAASRLPFFQVGQVFQKFECRDRSDGGI--IRNVVQWSLPSLLEEQEGATLVVTA 180

Query:   117 KFELIGSSNIKIIFEKTTVKTTGNLSQLPPLELP 150
             KF+ + S NI + FE+ +V+      QL  L  P
Sbjct:   181 KFDKVSSRNIYLQFEEISVRNININEQLQALIAP 214

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0010287 "plastoglobule" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LW57	PAP6_ARATH	No assigned EC number	0.7379	0.9739	0.6584	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	192
pfam04755	196	pfam04755, PAP_fibrillin, PAP_fibrillin	1e-45

>gnl|CDD|218245 pfam04755, PAP_fibrillin, PAP_fibrillin

 Score =  148 bits (376), Expect = 1e-45
 Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 22/200 (11%)

Query: 1   SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTL 60
            A+ G NRGL A++DD  + ++A  +LEA+      +  LD L GKWRLLY+++      
Sbjct: 9   DAIYGTNRGLRASSDDRAEIESAVTQLEALNPTPAPTESLDLLNGKWRLLYTTSKEL--- 65

Query: 61  GGNRPGPPTGRLLPITLGQVFQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFEL 120
               P    GRL  + +GQ++Q ID+ +    N            P  E + ++  KFE+
Sbjct: 66  ---LPLLARGRLPLLKVGQIYQTIDVNNLTVYNSVTFS------GPLAEGSFSVRAKFEI 116

Query: 121 IGSSNIKIIFEKTTVKTTGNLSQLP----------PLELPRFPDALRPPSDTRSGEFEVT 170
                ++I FE+  + T   L                   + P       D   G  E T
Sbjct: 117 RSPKRVQIRFERGVLGTPQLLKGSLTPLQDTASNIRGISSQLPLPFPLSGDRAKGWLETT 176

Query: 171 YLDNDTRITRGDRAELRVFV 190
           YLD D RI+RGD   L V  
Sbjct: 177 YLDEDLRISRGDGGSLFVLA 196

This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins. Length = 196

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	192
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	100.0

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=100.00  E-value=8.6e-44  Score=285.74  Aligned_cols=178  Identities=32%  Similarity=0.543  Sum_probs=141.9

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCeeEEEEEEccccccccCCCCCCCCCCCcCcceecee
Q 041139            1 SAVSGLNRGLAANTDDLQKADAAAKELEAVGGPVDLSVGLDRLQGKWRLLYSSAFSSRTLGGNRPGPPTGRLLPITLGQV   80 (192)
Q Consensus         1 ~a~a~t~rG~~a~~~~r~~I~~li~~LE~lnp~~~p~~~~~lL~G~W~L~yts~~~~~~l~~~~~~~~~grl~~~~~g~v   80 (192)
                      +++++|+||+.+++++|++|+++|++||++||+++|+.+.++|+|+|+|+|||+.+...+      +..++++++.+|++
T Consensus         9 ~~~~~~~rG~~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~~~~~~------l~~~~~~~~~~~~v   82 (198)
T PF04755_consen    9 QAVAGTNRGLRASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSPEIRSL------LQRGRLPGVRVGRV   82 (198)
T ss_pred             HHHhccCCCccCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCCCcccc------ccccccccccccce
Confidence            378999999999999999999999999999999999754499999999999999764422      11244455689999


Q ss_pred             EEEEeCCCCeeEEEEEeeecCCCCCCCeeEEEEEEEEEEEcCCceEEEEEEEEEEEecCCC-----------CCCCCCcC
Q 041139           81 FQRIDILSKDFDNIAELELGVPWPLPPVEVTATLAHKFELIGSSNIKIIFEKTTVKTTGNL-----------SQLPPLEL  149 (192)
Q Consensus        81 ~Q~id~~~~~~~N~v~~~~g~p~~l~~~~~~~~v~a~~~~~~~~r~~v~F~~~~v~~~~~~-----------~~~~~~~~  149 (192)
                      ||+||.+++++.|+|++..     ++.+++.+.+.+++++.+++|+.++|+++.+++...+           ..+|+...
T Consensus        83 ~Q~id~~~~~~~N~v~~~~-----~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~l~~~l~~~~~~~~~v~~~~~  157 (198)
T PF04755_consen   83 FQTIDADNGRVENVVELSG-----FPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSLLKGVLGPLKDALNNVPRGIS  157 (198)
T ss_pred             EEEEECCCceEEEEEEEec-----cCceEEEEEEEEEEEEccccEEEEEEEeeEEcccceeeccchhhhhhhhhcccccc
Confidence            9999999999999999882     2335788999999999999999999999999752211           11222211


Q ss_pred             CCCCCCCCCCCCCCceEEEEEEeCCCeeEEecCCCcEEEE
Q 041139          150 PRFPDALRPPSDTRSGEFEVTYLDNDTRITRGDRAELRVF  189 (192)
Q Consensus       150 p~~p~~~~~~~~~~~g~l~~tYLD~dlRI~Rg~~G~lFV~  189 (192)
                      ..+|..++.+...++||||||||||||||+||++|++|||
T Consensus       158 ~~~~~~~~~~~~~~~g~l~~tYLDedlRI~Rg~~G~~fVl  197 (198)
T PF04755_consen  158 DELPVPLPLPGGSPKGWLDTTYLDEDLRISRGNKGSLFVL  197 (198)
T ss_pred             cccccccccCCCCCceEEEEEEECCCeEEEEcCCCCEEEe
Confidence            1123333334457899999999999999999999999998

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00