Citrus Sinensis ID: 041209
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 412 | 2.2.26 [Sep-21-2011] | |||||||
| P26413 | 645 | Heat shock 70 kDa protein | yes | no | 0.970 | 0.620 | 0.715 | 0.0 | |
| P09189 | 651 | Heat shock cognate 70 kDa | N/A | no | 0.987 | 0.625 | 0.712 | 0.0 | |
| Q9S9N1 | 646 | Heat shock 70 kDa protein | yes | no | 0.978 | 0.623 | 0.706 | 0.0 | |
| Q9LHA8 | 650 | Probable mediator of RNA | no | no | 0.936 | 0.593 | 0.726 | 0.0 | |
| P24629 | 650 | Heat shock cognate 70 kDa | N/A | no | 0.978 | 0.62 | 0.693 | 0.0 | |
| P27322 | 644 | Heat shock cognate 70 kDa | N/A | no | 0.922 | 0.590 | 0.719 | 0.0 | |
| P22953 | 651 | Probable mediator of RNA | no | no | 0.987 | 0.625 | 0.691 | 1e-180 | |
| P22954 | 653 | Probable mediator of RNA | no | no | 0.992 | 0.626 | 0.683 | 1e-177 | |
| O65719 | 649 | Heat shock 70 kDa protein | no | no | 0.961 | 0.610 | 0.672 | 1e-175 | |
| P11143 | 645 | Heat shock 70 kDa protein | N/A | no | 0.978 | 0.624 | 0.681 | 1e-175 |
| >sp|P26413|HSP70_SOYBN Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/485 (71%), Positives = 381/485 (78%), Gaps = 85/485 (17%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT----------------------------VKATAGDTH 32
+RIINEPTAAAIAYGLD KASR VKATAGDTH
Sbjct: 173 LRIINEPTAAAIAYGLDKKASRKGEQNVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTH 232
Query: 33 LGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSL 78
LGGEDFDNR+VNHFV+EFKRK+KKDISGNARALRRL+T TTIEIDSL
Sbjct: 233 LGGEDFDNRMVNHFVSEFKRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSL 292
Query: 79 YEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQ 138
YEGIDFYATITRARFEE+NMDLFRKCMEPVEKCLRD+KIDKSQVH+VVLVGGSTRIPKV
Sbjct: 293 YEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSQVHEVVLVGGSTRIPKVH 352
Query: 139 QLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIETAG 198
QLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSG+G++KVQDLLLLDVTPLSLG+ETAG
Sbjct: 353 QLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGQGDEKVQDLLLLDVTPLSLGLETAG 412
Query: 199 -------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPA 233
DN+P VLIQV+EGERARTKDNNLLGKFEL GIPPA
Sbjct: 413 GVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPA 472
Query: 234 PRGVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKA 289
PRGVPQ+NVCFDIDANGIL+VSA+DKTAG ITITNDKGRLSKEEIE+MV++AE+YKA
Sbjct: 473 PRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKA 532
Query: 290 EDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLV 349
EDEE+KKKVEAKNSLENYAYNM NT++DEK GKL P +KQKIEKA+++AI+WL+GNQ+
Sbjct: 533 EDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMA 592
Query: 350 EVDELEDKLKELKGFCNPIIAKMYEG--GASGDVPMGGGAEMPGGGHGKAETGGASGGPK 407
EVDE EDK KEL+G CNPIIAKMY+G G GDVPM GA+MP G GPK
Sbjct: 593 EVDEFEDKQKELEGICNPIIAKMYQGAAGPGGDVPM--GADMPAAG----------AGPK 640
Query: 408 IEEVD 412
IEEVD
Sbjct: 641 IEEVD 645
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Glycine max (taxid: 3847) |
| >sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9S9N1|HSP7E_ARATH Heat shock 70 kDa protein 5 OS=Arabidopsis thaliana GN=HSP70-5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37C PE=1 SV=1 | Back alignment and function description |
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| >sp|P24629|HSP71_SOLLC Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1 | Back alignment and function description |
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| >sp|P27322|HSP72_SOLLC Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1 | Back alignment and function description |
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| >sp|P22953|MD37E_ARATH Probable mediator of RNA polymerase II transcription subunit 37e OS=Arabidopsis thaliana GN=MED37E PE=1 SV=3 | Back alignment and function description |
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| >sp|P22954|MD37D_ARATH Probable mediator of RNA polymerase II transcription subunit 37c OS=Arabidopsis thaliana GN=MED37D PE=1 SV=2 | Back alignment and function description |
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| >sp|O65719|HSP7C_ARATH Heat shock 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSP70-3 PE=1 SV=1 | Back alignment and function description |
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| >sp|P11143|HSP70_MAIZE Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 412 | ||||||
| 255543359 | 655 | heat shock protein, putative [Ricinus co | 0.997 | 0.627 | 0.766 | 0.0 | |
| 19878 | 573 | heat shock protein 70 [Nicotiana tabacum | 0.997 | 0.717 | 0.755 | 0.0 | |
| 224115828 | 655 | predicted protein [Populus trichocarpa] | 0.997 | 0.627 | 0.755 | 0.0 | |
| 186898205 | 655 | heat-shock protein 70 [Hevea brasiliensi | 0.997 | 0.627 | 0.755 | 0.0 | |
| 255543357 | 654 | heat shock protein, putative [Ricinus co | 0.997 | 0.628 | 0.763 | 0.0 | |
| 224115756 | 655 | predicted protein [Populus trichocarpa] | 0.997 | 0.627 | 0.732 | 0.0 | |
| 356562559 | 645 | PREDICTED: heat shock 70 kDa protein-lik | 0.970 | 0.620 | 0.721 | 0.0 | |
| 123601 | 645 | RecName: Full=Heat shock 70 kDa protein | 0.970 | 0.620 | 0.715 | 0.0 | |
| 116789965 | 651 | unknown [Picea sitchensis] | 0.987 | 0.625 | 0.725 | 0.0 | |
| 225445820 | 656 | PREDICTED: heat shock 70 kDa protein-lik | 0.997 | 0.626 | 0.724 | 0.0 |
| >gi|255543359|ref|XP_002512742.1| heat shock protein, putative [Ricinus communis] gi|223547753|gb|EEF49245.1| heat shock protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/484 (76%), Positives = 395/484 (81%), Gaps = 73/484 (15%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT----------------------------VKATAGDTH 32
MRIINEPTAAAIAYGLD K SR+ VKATAGDTH
Sbjct: 173 MRIINEPTAAAIAYGLDKKGSRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTH 232
Query: 33 LGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSL 78
LGGEDFDNRLVNHFVAEFKRKHKKDIS NARALRRL+T TTIEIDSL
Sbjct: 233 LGGEDFDNRLVNHFVAEFKRKHKKDISTNARALRRLRTACERAKRTLSSTSQTTIEIDSL 292
Query: 79 YEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQ 138
YEGIDFY+TITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQV D+VLVGGSTRIPKVQ
Sbjct: 293 YEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVDDIVLVGGSTRIPKVQ 352
Query: 139 QLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIETAG 198
QLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEG++KVQDLLLLDVTPLSLGIETAG
Sbjct: 353 QLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGDQKVQDLLLLDVTPLSLGIETAG 412
Query: 199 -------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPA 233
DN+P VLIQVYEGERARTKDNNLLGKFEL GIPPA
Sbjct: 413 GVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPA 472
Query: 234 PRGVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKA 289
PRGVPQINVCFDIDANGIL+V+A+DKTAG ITITNDKGRLSKEEIE+MVQEAEKYKA
Sbjct: 473 PRGVPQINVCFDIDANGILNVAAEDKTAGVKNKITITNDKGRLSKEEIEKMVQEAEKYKA 532
Query: 290 EDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLV 349
EDE++KKKVEAKNSLENYAYNM NTV+DEKFAGKLDP+DKQKIEKAI+E +EWLDGNQL
Sbjct: 533 EDEQVKKKVEAKNSLENYAYNMRNTVKDEKFAGKLDPSDKQKIEKAINETVEWLDGNQLA 592
Query: 350 EVDELEDKLKELKGFCNPIIAKMYEGGASGDVPMGGGAEMPGGGHG-KAETGGASGGPKI 408
EV+E EDKLKEL+G CNPIIAKMY+GGA+GDVPM GA+MP GG+G KA +GGA GPKI
Sbjct: 593 EVEEFEDKLKELEGLCNPIIAKMYQGGAAGDVPM-DGADMPNGGYGAKASSGGAGAGPKI 651
Query: 409 EEVD 412
EEVD
Sbjct: 652 EEVD 655
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|19878|emb|CAA44820.1| heat shock protein 70 [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|224115828|ref|XP_002332067.1| predicted protein [Populus trichocarpa] gi|222831953|gb|EEE70430.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|186898205|gb|ACC93947.1| heat-shock protein 70 [Hevea brasiliensis] | Back alignment and taxonomy information |
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| >gi|255543357|ref|XP_002512741.1| heat shock protein, putative [Ricinus communis] gi|223547752|gb|EEF49244.1| heat shock protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224115756|ref|XP_002332049.1| predicted protein [Populus trichocarpa] gi|222831935|gb|EEE70412.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356562559|ref|XP_003549537.1| PREDICTED: heat shock 70 kDa protein-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|123601|sp|P26413.1|HSP70_SOYBN RecName: Full=Heat shock 70 kDa protein gi|18663|emb|CAA44620.1| Heat Shock 70kD protein [Glycine max] | Back alignment and taxonomy information |
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| >gi|116789965|gb|ABK25453.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
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| >gi|225445820|ref|XP_002277050.1| PREDICTED: heat shock 70 kDa protein-like [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 412 | ||||||
| TAIR|locus:2200462 | 646 | Hsp70b "heat shock protein 70B | 0.502 | 0.320 | 0.675 | 7e-151 | |
| TAIR|locus:2101222 | 650 | HSP70 "heat shock protein 70" | 0.512 | 0.324 | 0.669 | 8.9e-151 | |
| TAIR|locus:2181833 | 651 | HSC70-1 "heat shock cognate pr | 0.424 | 0.268 | 0.746 | 6.2e-148 | |
| TAIR|locus:2181818 | 653 | Hsp70-2 [Arabidopsis thaliana | 0.519 | 0.327 | 0.651 | 2.4e-146 | |
| TAIR|locus:2074984 | 649 | AT3G09440 [Arabidopsis thalian | 0.446 | 0.283 | 0.712 | 1.9e-144 | |
| TAIR|locus:2010713 | 617 | ERD2 "EARLY-RESPONSIVE TO DEHY | 0.424 | 0.283 | 0.719 | 2.4e-134 | |
| UNIPROTKB|P19120 | 650 | HSPA8 "Heat shock cognate 71 k | 0.424 | 0.269 | 0.656 | 6.4e-130 | |
| UNIPROTKB|E2R0T6 | 646 | HSPA8 "Uncharacterized protein | 0.424 | 0.270 | 0.656 | 6.4e-130 | |
| UNIPROTKB|E9PKE3 | 627 | HSPA8 "Heat shock cognate 71 k | 0.424 | 0.279 | 0.656 | 6.4e-130 | |
| UNIPROTKB|P11142 | 646 | HSPA8 "Heat shock cognate 71 k | 0.424 | 0.270 | 0.656 | 6.4e-130 |
| TAIR|locus:2200462 Hsp70b "heat shock protein 70B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 728 (261.3 bits), Expect = 7.0e-151, Sum P(3) = 7.0e-151
Identities = 150/222 (67%), Positives = 166/222 (74%)
Query: 196 TAGDNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVS 255
T DN+P VLIQVYEGERART+DNNLLG FELKGIPPAPRGVPQINVCFDIDANGIL+VS
Sbjct: 435 TYADNQPGVLIQVYEGERARTRDNNLLGTFELKGIPPAPRGVPQINVCFDIDANGILNVS 494
Query: 256 AKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNM 311
A+DKTAG ITITNDKGRLSKEEIE+MVQ+AEKYKAEDE++KKKVEAKNSLENYAYNM
Sbjct: 495 AEDKTAGVKNQITITNDKGRLSKEEIEKMVQDAEKYKAEDEQVKKKVEAKNSLENYAYNM 554
Query: 312 SNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXGFCNPIIAK 371
NT++DEK A KL DKQKIEKAIDE IEW++GNQ G CNPII+K
Sbjct: 555 RNTIKDEKLAQKLTQEDKQKIEKAIDETIEWIEGNQLAEVDEFEYKLKELEGICNPIISK 614
Query: 372 MYEGGAS-GDVPMXXXXXXXXXXXXXXXXXXXXXXPKIEEVD 412
MY+GGA+ G +P PKIEEVD
Sbjct: 615 MYQGGAAAGGMP----------TDGDFSSSGAAGGPKIEEVD 646
|
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| TAIR|locus:2101222 HSP70 "heat shock protein 70" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2181833 HSC70-1 "heat shock cognate protein 70-1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2181818 Hsp70-2 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2074984 AT3G09440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2010713 ERD2 "EARLY-RESPONSIVE TO DEHYDRATION 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P19120 HSPA8 "Heat shock cognate 71 kDa protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R0T6 HSPA8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PKE3 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P11142 HSPA8 "Heat shock cognate 71 kDa protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9S9N1 | HSP7E_ARATH | No assigned EC number | 0.7060 | 0.9781 | 0.6238 | yes | no |
| P26413 | HSP70_SOYBN | No assigned EC number | 0.7154 | 0.9708 | 0.6201 | yes | no |
| P09189 | HSP7C_PETHY | No assigned EC number | 0.7122 | 0.9878 | 0.6251 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 412 | |||
| PTZ00009 | 653 | PTZ00009, PTZ00009, heat shock 70 kDa protein; Pro | 0.0 | |
| pfam00012 | 598 | pfam00012, HSP70, Hsp70 protein | 1e-180 | |
| PRK00290 | 627 | PRK00290, dnaK, molecular chaperone DnaK; Provisio | 1e-155 | |
| TIGR02350 | 595 | TIGR02350, prok_dnaK, chaperone protein DnaK | 1e-138 | |
| COG0443 | 579 | COG0443, DnaK, Molecular chaperone [Posttranslatio | 1e-127 | |
| cd10233 | 376 | cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding | 1e-123 | |
| CHL00094 | 621 | CHL00094, dnaK, heat shock protein 70 | 1e-118 | |
| PTZ00400 | 663 | PTZ00400, PTZ00400, DnaK-type molecular chaperone; | 1e-113 | |
| PRK13411 | 653 | PRK13411, PRK13411, molecular chaperone DnaK; Prov | 1e-113 | |
| PRK13410 | 668 | PRK13410, PRK13410, molecular chaperone DnaK; Prov | 1e-106 | |
| PLN03184 | 673 | PLN03184, PLN03184, chloroplast Hsp70; Provisional | 1e-101 | |
| cd10241 | 374 | cd10241, HSPA5-like_NBD, Nucleotide-binding domain | 7e-90 | |
| PRK05183 | 616 | PRK05183, hscA, chaperone protein HscA; Provisiona | 6e-85 | |
| TIGR01991 | 599 | TIGR01991, HscA, Fe-S protein assembly chaperone H | 7e-85 | |
| PTZ00186 | 657 | PTZ00186, PTZ00186, heat shock 70 kDa precursor pr | 3e-76 | |
| cd10170 | 369 | cd10170, HSP70_NBD, Nucleotide-binding domain of t | 8e-68 | |
| cd10234 | 376 | cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding d | 3e-62 | |
| cd11733 | 377 | cd11733, HSPA9-like_NBD, Nucleotide-binding domain | 2e-55 | |
| cd10228 | 381 | cd10228, HSPA4_like_NDB, Nucleotide-binding domain | 3e-53 | |
| cd10238 | 375 | cd10238, HSPA14-like_NBD, Nucleotide-binding domai | 7e-53 | |
| cd11734 | 373 | cd11734, Ssq1_like_NBD, Nucleotide-binding domain | 3e-50 | |
| cd10235 | 339 | cd10235, HscC_like_NBD, Nucleotide-binding domain | 5e-46 | |
| cd10236 | 355 | cd10236, HscA_like_NBD, Nucleotide-binding domain | 2e-43 | |
| cd10230 | 388 | cd10230, HYOU1-like_NBD, Nucleotide-binding domain | 4e-43 | |
| PRK01433 | 595 | PRK01433, hscA, chaperone protein HscA; Provisiona | 2e-38 | |
| cd10237 | 417 | cd10237, HSPA13-like_NBD, Nucleotide-binding domai | 3e-36 | |
| cd10232 | 386 | cd10232, ScSsz1p_like_NBD, Nucleotide-binding doma | 1e-34 | |
| cd11737 | 383 | cd11737, HSPA4_NBD, Nucleotide-binding domain of H | 2e-32 | |
| cd11732 | 377 | cd11732, HSP105-110_like_NBD, Nucleotide-binding d | 7e-31 | |
| cd11739 | 383 | cd11739, HSPH1_NBD, Nucleotide-binding domain of H | 1e-27 | |
| cd11738 | 383 | cd11738, HSPA4L_NBD, Nucleotide-binding domain of | 1e-25 | |
| TIGR01312 | 481 | TIGR01312, XylB, D-xylulose kinase | 1e-06 | |
| cd10231 | 415 | cd10231, YegD_like, Escherichia coli YegD, a putat | 1e-06 | |
| cd07809 | 487 | cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup | 3e-05 | |
| COG1070 | 502 | COG1070, XylB, Sugar (pentulose and hexulose) kina | 7e-04 |
| >gnl|CDD|240227 PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
Score = 637 bits (1646), Expect = 0.0
Identities = 294/485 (60%), Positives = 338/485 (69%), Gaps = 75/485 (15%)
Query: 1 MRIINEPTAAAIAYGLDNKASRT--------------------------VKATAGDTHLG 34
+RIINEPTAAAIAYGLD K VKATAGDTHLG
Sbjct: 171 LRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLG 230
Query: 35 GEDFDNRLVNHFVAEFKRKHK-KDISGNARALRRLQT--------------TTIEIDSLY 79
GEDFDNRLV V +FKRK++ KD+S N RALRRL+T TIEIDSL+
Sbjct: 231 GEDFDNRLVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLF 290
Query: 80 EGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQ 139
EGID+ TI+RARFEEL D FR ++PVEK L+D+ +DK VH+VVLVGGSTRIPKVQ
Sbjct: 291 EGIDYNVTISRARFEELCGDYFRNTLQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQS 350
Query: 140 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIETAG- 198
L++DFFNGKE CKSINPDEAVAYGAAVQAAIL+GE + +VQDLLLLDVTPLSLG+ETAG
Sbjct: 351 LIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPLSLGLETAGG 410
Query: 199 ------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAP 234
DN+P VLIQV+EGERA TKDNNLLGKF L GIPPAP
Sbjct: 411 VMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAP 470
Query: 235 RGVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAE 290
RGVPQI V FDIDANGIL+VSA+DK+ G ITITNDKGRLSK +I+RMV EAEKYKAE
Sbjct: 471 RGVPQIEVTFDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKYKAE 530
Query: 291 DEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLVE 350
DE +++VEAKN LENY Y+M NT++DEK GKL +DK IEKAIDEA+EWL+ NQL E
Sbjct: 531 DEANRERVEAKNGLENYCYSMKNTLQDEKVKGKLSDSDKATIEKAIDEALEWLEKNQLAE 590
Query: 351 VDELEDKLKELKGFCNPIIAKMYE---GGASGDVPMGGGAEMPGGGHGKAETGGASGGPK 407
+E E K KE++ CNPI+ KMY+ GG G +P G MPGG GAS GP
Sbjct: 591 KEEFEHKQKEVESVCNPIMTKMYQAAGGGMPGGMPGGMPGGMPGGAGPAG--AGASSGPT 648
Query: 408 IEEVD 412
+EEVD
Sbjct: 649 VEEVD 653
|
Length = 653 |
| >gnl|CDD|215656 pfam00012, HSP70, Hsp70 protein | Back alignment and domain information |
|---|
| >gnl|CDD|234715 PRK00290, dnaK, molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK | Back alignment and domain information |
|---|
| >gnl|CDD|223520 COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|212675 cd10233, HSPA1-2_6-8-like_NBD, Nucleotide-binding domain of HSPA1-A, -B, -L, HSPA-2, -6, -7, -8, and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70 | Back alignment and domain information |
|---|
| >gnl|CDD|240403 PTZ00400, PTZ00400, DnaK-type molecular chaperone; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184039 PRK13411, PRK13411, molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184038 PRK13410, PRK13410, molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215618 PLN03184, PLN03184, chloroplast Hsp70; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|212681 cd10241, HSPA5-like_NBD, Nucleotide-binding domain of human HSPA5 and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|235360 PRK05183, hscA, chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233673 TIGR01991, HscA, Fe-S protein assembly chaperone HscA | Back alignment and domain information |
|---|
| >gnl|CDD|140213 PTZ00186, PTZ00186, heat shock 70 kDa precursor protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|212667 cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family | Back alignment and domain information |
|---|
| >gnl|CDD|212676 cd10234, HSPA9-Ssq1-like_NBD, Nucleotide-binding domain of human HSPA9 and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212683 cd11733, HSPA9-like_NBD, Nucleotide-binding domain of human HSPA9, Escherichia coli DnaK, and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212670 cd10228, HSPA4_like_NDB, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4 and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212680 cd10238, HSPA14-like_NBD, Nucleotide-binding domain of human HSPA14 and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212684 cd11734, Ssq1_like_NBD, Nucleotide-binding domain of Saccharomyces cerevisiae Ssq1 and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212677 cd10235, HscC_like_NBD, Nucleotide-binding domain of Escherichia coli HscC and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212672 cd10230, HYOU1-like_NBD, Nucleotide-binding domain of human HYOU1 and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|212679 cd10237, HSPA13-like_NBD, Nucleotide-binding domain of human HSPA13 and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212674 cd10232, ScSsz1p_like_NBD, Nucleotide-binding domain of Saccharmomyces cerevisiae Ssz1pp and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212687 cd11737, HSPA4_NBD, Nucleotide-binding domain of HSPA4 | Back alignment and domain information |
|---|
| >gnl|CDD|212682 cd11732, HSP105-110_like_NBD, Nucleotide-binding domain of 105/110 kDa heat shock proteins including HSPA4, HYOU1, and similar proteins | Back alignment and domain information |
|---|
| >gnl|CDD|212689 cd11739, HSPH1_NBD, Nucleotide-binding domain of HSPH1 | Back alignment and domain information |
|---|
| >gnl|CDD|212688 cd11738, HSPA4L_NBD, Nucleotide-binding domain of HSPA4L | Back alignment and domain information |
|---|
| >gnl|CDD|233354 TIGR01312, XylB, D-xylulose kinase | Back alignment and domain information |
|---|
| >gnl|CDD|212673 cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|198375 cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|223996 COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 412 | |||
| KOG0100 | 663 | consensus Molecular chaperones GRP78/BiP/KAR2, HSP | 100.0 | |
| PTZ00009 | 653 | heat shock 70 kDa protein; Provisional | 100.0 | |
| KOG0101 | 620 | consensus Molecular chaperones HSP70/HSC70, HSP70 | 100.0 | |
| PLN03184 | 673 | chloroplast Hsp70; Provisional | 100.0 | |
| PRK13411 | 653 | molecular chaperone DnaK; Provisional | 100.0 | |
| PTZ00186 | 657 | heat shock 70 kDa precursor protein; Provisional | 100.0 | |
| PRK13410 | 668 | molecular chaperone DnaK; Provisional | 100.0 | |
| PTZ00400 | 663 | DnaK-type molecular chaperone; Provisional | 100.0 | |
| PRK00290 | 627 | dnaK molecular chaperone DnaK; Provisional | 100.0 | |
| CHL00094 | 621 | dnaK heat shock protein 70 | 100.0 | |
| TIGR02350 | 595 | prok_dnaK chaperone protein DnaK. Members of this | 100.0 | |
| TIGR01991 | 599 | HscA Fe-S protein assembly chaperone HscA. The Hea | 100.0 | |
| KOG0102 | 640 | consensus Molecular chaperones mortalin/PBP74/GRP7 | 100.0 | |
| PRK05183 | 616 | hscA chaperone protein HscA; Provisional | 100.0 | |
| PRK01433 | 595 | hscA chaperone protein HscA; Provisional | 100.0 | |
| PF00012 | 602 | HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho | 100.0 | |
| COG0443 | 579 | DnaK Molecular chaperone [Posttranslational modifi | 100.0 | |
| KOG0103 | 727 | consensus Molecular chaperones HSP105/HSP110/SSE1, | 100.0 | |
| KOG0104 | 902 | consensus Molecular chaperones GRP170/SIL1, HSP70 | 100.0 | |
| PRK11678 | 450 | putative chaperone; Provisional | 99.91 | |
| PRK13928 | 336 | rod shape-determining protein Mbl; Provisional | 99.85 | |
| PRK13927 | 334 | rod shape-determining protein MreB; Provisional | 99.79 | |
| PRK13929 | 335 | rod-share determining protein MreBH; Provisional | 99.76 | |
| TIGR00904 | 333 | mreB cell shape determining protein, MreB/Mrl fami | 99.75 | |
| PRK13930 | 335 | rod shape-determining protein MreB; Provisional | 99.74 | |
| PF06723 | 326 | MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba | 99.59 | |
| TIGR02529 | 239 | EutJ ethanolamine utilization protein EutJ family | 99.5 | |
| PRK15080 | 267 | ethanolamine utilization protein EutJ; Provisional | 99.45 | |
| TIGR01174 | 371 | ftsA cell division protein FtsA. This bacterial ce | 99.42 | |
| COG1077 | 342 | MreB Actin-like ATPase involved in cell morphogene | 99.36 | |
| PRK09472 | 420 | ftsA cell division protein FtsA; Reviewed | 99.33 | |
| COG0849 | 418 | ftsA Cell division ATPase FtsA [Cell division and | 98.32 | |
| PRK13917 | 344 | plasmid segregation protein ParM; Provisional | 98.05 | |
| cd00012 | 371 | ACTIN Actin; An ubiquitous protein involved in the | 98.01 | |
| smart00268 | 373 | ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki | 97.33 | |
| PF02782 | 198 | FGGY_C: FGGY family of carbohydrate kinases, C-ter | 97.24 | |
| PF11104 | 340 | PilM_2: Type IV pilus assembly protein PilM;; PDB: | 97.24 | |
| PF00022 | 393 | Actin: Actin; InterPro: IPR004000 Actin [, ] is a | 97.23 | |
| TIGR03192 | 293 | benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s | 97.08 | |
| TIGR00241 | 248 | CoA_E_activ CoA-substrate-specific enzyme activase | 96.97 | |
| TIGR03739 | 320 | PRTRC_D PRTRC system protein D. A novel genetic sy | 96.89 | |
| TIGR02261 | 262 | benz_CoA_red_D benzoyl-CoA reductase, bcr type, su | 96.69 | |
| PRK15027 | 484 | xylulokinase; Provisional | 96.65 | |
| TIGR03286 | 404 | methan_mark_15 putative methanogenesis marker prot | 96.61 | |
| PLN02669 | 556 | xylulokinase | 96.57 | |
| TIGR01315 | 541 | 5C_CHO_kinase FGGY-family pentulose kinase. This m | 96.56 | |
| TIGR02259 | 432 | benz_CoA_red_A benzoyl-CoA reductase, bcr type, su | 96.5 | |
| PTZ00281 | 376 | actin; Provisional | 96.47 | |
| TIGR02628 | 465 | fuculo_kin_coli L-fuculokinase. Members of this fa | 96.37 | |
| PTZ00452 | 375 | actin; Provisional | 96.31 | |
| PTZ00280 | 414 | Actin-related protein 3; Provisional | 96.27 | |
| PRK04123 | 548 | ribulokinase; Provisional | 96.26 | |
| COG1924 | 396 | Activator of 2-hydroxyglutaryl-CoA dehydratase (HS | 96.24 | |
| TIGR01312 | 481 | XylB D-xylulose kinase. D-xylulose kinase (XylB) g | 96.19 | |
| PRK00047 | 498 | glpK glycerol kinase; Provisional | 96.18 | |
| PTZ00466 | 380 | actin-like protein; Provisional | 96.16 | |
| TIGR01311 | 493 | glycerol_kin glycerol kinase. This model describes | 96.11 | |
| PTZ00294 | 504 | glycerol kinase-like protein; Provisional | 96.05 | |
| PRK10331 | 470 | L-fuculokinase; Provisional | 96.01 | |
| TIGR01234 | 536 | L-ribulokinase L-ribulokinase. This enzyme catalyz | 95.86 | |
| PTZ00004 | 378 | actin-2; Provisional | 95.76 | |
| TIGR01314 | 505 | gntK_FGGY gluconate kinase, FGGY type. Gluconate i | 95.66 | |
| PLN02295 | 512 | glycerol kinase | 95.65 | |
| TIGR02627 | 454 | rhamnulo_kin rhamnulokinase. This model describes | 95.6 | |
| PRK13317 | 277 | pantothenate kinase; Provisional | 95.58 | |
| TIGR01175 | 348 | pilM type IV pilus assembly protein PilM. This pro | 95.53 | |
| PF06406 | 318 | StbA: StbA protein; InterPro: IPR009440 This entry | 95.49 | |
| PRK10939 | 520 | autoinducer-2 (AI-2) kinase; Provisional | 95.38 | |
| PRK10640 | 471 | rhaB rhamnulokinase; Provisional | 95.34 | |
| KOG2531 | 545 | consensus Sugar (pentulose and hexulose) kinases [ | 95.3 | |
| KOG2517 | 516 | consensus Ribulose kinase and related carbohydrate | 95.3 | |
| COG1070 | 502 | XylB Sugar (pentulose and hexulose) kinases [Carbo | 94.45 | |
| COG4820 | 277 | EutJ Ethanolamine utilization protein, possible ch | 93.52 | |
| PTZ00009 | 653 | heat shock 70 kDa protein; Provisional | 92.91 | |
| COG1069 | 544 | AraB Ribulose kinase [Energy production and conver | 92.56 | |
| PF01869 | 271 | BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In | 92.55 | |
| KOG0681 | 645 | consensus Actin-related protein - Arp5p [Cytoskele | 91.29 | |
| COG0554 | 499 | GlpK Glycerol kinase [Energy production and conver | 90.5 | |
| PF03702 | 364 | UPF0075: Uncharacterised protein family (UPF0075); | 88.14 | |
| TIGR03281 | 326 | methan_mark_12 putative methanogenesis marker prot | 85.75 | |
| PF02543 | 360 | CmcH_NodU: Carbamoyltransferase; InterPro: IPR0036 | 84.69 | |
| TIGR00555 | 279 | panK_eukar pantothenate kinase, eukaryotic/staphyl | 84.65 | |
| PF07520 | 1002 | SrfB: Virulence factor SrfB; InterPro: IPR009216 T | 83.97 | |
| COG5277 | 444 | Actin and related proteins [Cytoskeleton] | 82.32 | |
| COG4972 | 354 | PilM Tfp pilus assembly protein, ATPase PilM [Cell | 80.6 |
| >KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=584.10 Aligned_cols=374 Identities=63% Similarity=1.033 Sum_probs=360.5
Q ss_pred CcccchhHHHHHHhcccCCC-CC------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHHhhcc
Q 041209 1 MRIINEPTAAAIAYGLDNKA-SR------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHK 55 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~-~~------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~ 55 (412)
+|+||||||||++|++++.. ++ +|+++.||.+|||.|||.++++||.+-|+++++
T Consensus 203 ~RIiNePTaAAIAYGLDKk~gEknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~rvm~~fiklykkK~g 282 (663)
T KOG0100|consen 203 VRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKHG 282 (663)
T ss_pred EEeecCccHHHHHhcccccCCcceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHHHHHHHHHHHhhhcC
Confidence 58999999999999999875 33 999999999999999999999999999999999
Q ss_pred CCCcccHHHHHHhhc--------------ceEEeeecccCceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 041209 56 KDISGNARALRRLQT--------------TTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQ 121 (412)
Q Consensus 56 ~~~~~~~~~~~~l~~--------------~~i~i~~~~~~~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~ 121 (412)
.+++.+.+++.+|++ +.+.+++++++.+|+-++||..||++.-+++.++..+++++|+++++.+.+
T Consensus 283 kDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~Ds~lkKsd 362 (663)
T KOG0100|consen 283 KDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLEDSDLKKSD 362 (663)
T ss_pred CccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHhhcCccccc
Confidence 999999999999987 678999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhCCCCccccceEEEeccCccccccccC---
Q 041209 122 VHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIETAG--- 198 (412)
Q Consensus 122 id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~~~~~~~~~~~~~dv~~~s~gi~~~~--- 198 (412)
||.|+|||||+|||.||++|+.+|+|+++...+|||||||+|||.+|+.+||. ....++++.|++|+++||++.|
T Consensus 363 ideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGe--e~t~divLLDv~pLtlGIETvGGVM 440 (663)
T KOG0100|consen 363 IDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGE--EDTGDIVLLDVNPLTLGIETVGGVM 440 (663)
T ss_pred CceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccc--cCcCcEEEEeeccccceeeeeccee
Confidence 99999999999999999999999999999999999999999999999999964 4578999999999999999876
Q ss_pred ----------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCCeEEEEEEecCceeEEEEE
Q 041209 199 ----------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDANGILHVSA 256 (412)
Q Consensus 199 ----------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~~i~v~f~id~~g~l~v~a 256 (412)
|+|+.+.|.||+|++...++|+.||.|.+.||||+|+|+|+|+|+|++|.||+|+|+|
T Consensus 441 TklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFevDangiL~VsA 520 (663)
T KOG0100|consen 441 TKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVDANGILQVSA 520 (663)
T ss_pred eccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEEEEccCceEEEEe
Confidence 8999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhhhcch-hhhhcCCCHHhHHH
Q 041209 257 KDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRD-EKFAGKLDPADKQK 331 (412)
Q Consensus 257 ~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~-~~~~~~~~~~e~~~ 331 (412)
.++.++ |+|+|++++||.|+|++|...+++|.++|+...++.++||+||+|.|.+++.+.+ +++...+++++++.
T Consensus 521 eDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~Kl~~edKe~ 600 (663)
T KOG0100|consen 521 EDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGKLSDEDKET 600 (663)
T ss_pred eccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhcccCChhHHHH
Confidence 999887 9999999999999999999999999999999999999999999999999999987 67889999999999
Q ss_pred HHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 041209 332 IEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYEGG 376 (412)
Q Consensus 332 i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e~~ 376 (412)
+..++++..+||++|++++.++|++++++|+..++||..+++..+
T Consensus 601 ~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~PiisklY~~a 645 (663)
T KOG0100|consen 601 IEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISKLYGGA 645 (663)
T ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999754
|
|
| >PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
| >KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PLN03184 chloroplast Hsp70; Provisional | Back alignment and domain information |
|---|
| >PRK13411 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PTZ00186 heat shock 70 kDa precursor protein; Provisional | Back alignment and domain information |
|---|
| >PRK13410 molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >PTZ00400 DnaK-type molecular chaperone; Provisional | Back alignment and domain information |
|---|
| >PRK00290 dnaK molecular chaperone DnaK; Provisional | Back alignment and domain information |
|---|
| >CHL00094 dnaK heat shock protein 70 | Back alignment and domain information |
|---|
| >TIGR02350 prok_dnaK chaperone protein DnaK | Back alignment and domain information |
|---|
| >TIGR01991 HscA Fe-S protein assembly chaperone HscA | Back alignment and domain information |
|---|
| >KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05183 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >PRK01433 hscA chaperone protein HscA; Provisional | Back alignment and domain information |
|---|
| >PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins | Back alignment and domain information |
|---|
| >COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK11678 putative chaperone; Provisional | Back alignment and domain information |
|---|
| >PRK13928 rod shape-determining protein Mbl; Provisional | Back alignment and domain information |
|---|
| >PRK13927 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >PRK13929 rod-share determining protein MreBH; Provisional | Back alignment and domain information |
|---|
| >TIGR00904 mreB cell shape determining protein, MreB/Mrl family | Back alignment and domain information |
|---|
| >PRK13930 rod shape-determining protein MreB; Provisional | Back alignment and domain information |
|---|
| >PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes | Back alignment and domain information |
|---|
| >TIGR02529 EutJ ethanolamine utilization protein EutJ family protein | Back alignment and domain information |
|---|
| >PRK15080 ethanolamine utilization protein EutJ; Provisional | Back alignment and domain information |
|---|
| >TIGR01174 ftsA cell division protein FtsA | Back alignment and domain information |
|---|
| >COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK09472 ftsA cell division protein FtsA; Reviewed | Back alignment and domain information |
|---|
| >COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK13917 plasmid segregation protein ParM; Provisional | Back alignment and domain information |
|---|
| >cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton | Back alignment and domain information |
|---|
| >smart00268 ACTIN Actin | Back alignment and domain information |
|---|
| >PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related | Back alignment and domain information |
|---|
| >PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A | Back alignment and domain information |
|---|
| >PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton | Back alignment and domain information |
|---|
| >TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit | Back alignment and domain information |
|---|
| >TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative | Back alignment and domain information |
|---|
| >TIGR03739 PRTRC_D PRTRC system protein D | Back alignment and domain information |
|---|
| >TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D | Back alignment and domain information |
|---|
| >PRK15027 xylulokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR03286 methan_mark_15 putative methanogenesis marker protein 15 | Back alignment and domain information |
|---|
| >PLN02669 xylulokinase | Back alignment and domain information |
|---|
| >TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase | Back alignment and domain information |
|---|
| >TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A | Back alignment and domain information |
|---|
| >PTZ00281 actin; Provisional | Back alignment and domain information |
|---|
| >TIGR02628 fuculo_kin_coli L-fuculokinase | Back alignment and domain information |
|---|
| >PTZ00452 actin; Provisional | Back alignment and domain information |
|---|
| >PTZ00280 Actin-related protein 3; Provisional | Back alignment and domain information |
|---|
| >PRK04123 ribulokinase; Provisional | Back alignment and domain information |
|---|
| >COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism] | Back alignment and domain information |
|---|
| >TIGR01312 XylB D-xylulose kinase | Back alignment and domain information |
|---|
| >PRK00047 glpK glycerol kinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00466 actin-like protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01311 glycerol_kin glycerol kinase | Back alignment and domain information |
|---|
| >PTZ00294 glycerol kinase-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK10331 L-fuculokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01234 L-ribulokinase L-ribulokinase | Back alignment and domain information |
|---|
| >PTZ00004 actin-2; Provisional | Back alignment and domain information |
|---|
| >TIGR01314 gntK_FGGY gluconate kinase, FGGY type | Back alignment and domain information |
|---|
| >PLN02295 glycerol kinase | Back alignment and domain information |
|---|
| >TIGR02627 rhamnulo_kin rhamnulokinase | Back alignment and domain information |
|---|
| >PRK13317 pantothenate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01175 pilM type IV pilus assembly protein PilM | Back alignment and domain information |
|---|
| >PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA [] | Back alignment and domain information |
|---|
| >PRK10939 autoinducer-2 (AI-2) kinase; Provisional | Back alignment and domain information |
|---|
| >PRK10640 rhaB rhamnulokinase; Provisional | Back alignment and domain information |
|---|
| >KOG2531 consensus Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2517 consensus Ribulose kinase and related carbohydrate kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PTZ00009 heat shock 70 kDa protein; Provisional | Back alignment and domain information |
|---|
| >COG1069 AraB Ribulose kinase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis | Back alignment and domain information |
|---|
| >KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0554 GlpK Glycerol kinase [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P | Back alignment and domain information |
|---|
| >TIGR03281 methan_mark_12 putative methanogenesis marker protein 12 | Back alignment and domain information |
|---|
| >PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors [] | Back alignment and domain information |
|---|
| >TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type | Back alignment and domain information |
|---|
| >PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function | Back alignment and domain information |
|---|
| >COG5277 Actin and related proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 412 | ||||
| 1yuw_A | 554 | Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214 | 1e-125 | ||
| 3c7n_B | 554 | Structure Of The Hsp110:hsc70 Nucleotide Exchange C | 1e-125 | ||
| 2v7z_A | 543 | Crystal Structure Of The 70-Kda Heat Shock Cognate | 1e-121 | ||
| 2qw9_B | 394 | Crystal Structure Of Bovine Hsc70 (1-394aa)in The A | 1e-70 | ||
| 2qwn_A | 394 | Crystal Structure Of Disulfide-Bond-Crosslinked Com | 2e-69 | ||
| 1ba1_A | 386 | Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi | 2e-69 | ||
| 1bup_A | 386 | T13s Mutant Of Bovine 70 Kilodalton Heat Shock Prot | 4e-69 | ||
| 1ngg_A | 386 | Structural Basis Of The 70-Kilodalton Heat Shock Co | 4e-69 | ||
| 1ngc_A | 386 | Structural Basis Of The 70-Kilodalton Heat Shock Co | 4e-69 | ||
| 1nge_A | 386 | Structural Basis Of The 70-Kilodalton Heat Shock Co | 4e-69 | ||
| 1ngd_A | 386 | Structural Basis Of The 70-kilodalton Heat Shock Co | 4e-69 | ||
| 1ngf_A | 386 | Structural Basis Of The 70-Kilodalton Heat Shock Co | 4e-69 | ||
| 1ba0_A | 386 | Heat-Shock Cognate 70kd Protein 44kd Atpase N-Termi | 4e-69 | ||
| 1ngh_A | 386 | Structural Basis Of The 70-Kilodalton Heat Shock Co | 4e-69 | ||
| 1ats_A | 386 | Threonine 204 Of The Chaperone Protein Hsc70 Influe | 5e-69 | ||
| 1atr_A | 386 | Threonine 204 Of The Chaperone Protein Hsc70 Influe | 5e-69 | ||
| 1hpm_A | 386 | How Potassium Affects The Activity Of The Molecular | 5e-69 | ||
| 1ngb_A | 386 | Structural Basis Of The 70-Kilodalton Heat Shock Co | 8e-69 | ||
| 1nga_A | 386 | Structural Basis Of The 70-Kilodalton Heat Shock Co | 1e-68 | ||
| 1kay_A | 381 | 70kd Heat Shock Cognate Protein Atpase Domain, K71a | 3e-68 | ||
| 3cqx_A | 386 | Chaperone Complex Length = 386 | 3e-68 | ||
| 1kax_A | 381 | 70kd Heat Shock Cognate Protein Atpase Domain, K71m | 3e-68 | ||
| 1kaz_A | 381 | 70kd Heat Shock Cognate Protein Atpase Domain, K71e | 3e-68 | ||
| 2bup_A | 381 | T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 | 3e-68 | ||
| 1hx1_A | 400 | Crystal Structure Of A Bag Domain In Complex With T | 3e-68 | ||
| 3fzf_A | 381 | Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP | 4e-68 | ||
| 1qqo_A | 378 | E175s Mutant Of Bovine 70 Kilodalton Heat Shock Pro | 4e-67 | ||
| 1qqm_A | 378 | D199s Mutant Of Bovine 70 Kilodalton Heat Shock Pro | 1e-66 | ||
| 3fe1_A | 403 | Crystal Structure Of The Human 70kda Heat Shock Pro | 1e-66 | ||
| 1qqn_A | 378 | D206s Mutant Of Bovine 70 Kilodalton Heat Shock Pro | 2e-66 | ||
| 2e8a_A | 391 | Crystal Structure Of The Human Hsp70 Atpase Domain | 7e-66 | ||
| 2e88_A | 391 | Crystal Structure Of The Human Hsp70 Atpase Domain | 7e-66 | ||
| 3a8y_A | 392 | Crystal Structure Of The Complex Between The Bag5 B | 8e-66 | ||
| 3jxu_A | 409 | Crystal Structure Of The Human 70kda Heat Shock Pro | 1e-65 | ||
| 3d2e_B | 382 | Crystal Structure Of A Complex Of Sse1p And Hsp70, | 2e-65 | ||
| 3d2f_B | 382 | Crystal Structure Of A Complex Of Sse1p And Hsp70 L | 2e-65 | ||
| 1s3x_A | 382 | The Crystal Structure Of The Human Hsp70 Atpase Dom | 2e-65 | ||
| 1hjo_A | 380 | Atpase Domain Of Human Heat Shock 70kda Protein 1 L | 2e-65 | ||
| 3gdq_A | 408 | Crystal Structure Of The Human 70kda Heat Shock Pro | 8e-64 | ||
| 3i33_A | 404 | Crystal Structure Of The Human 70kda Heat Shock Pro | 3e-63 | ||
| 4fsv_A | 387 | Crystal Structure Of A Heat Shock 70kda Protein 2 ( | 1e-62 | ||
| 1xqs_C | 191 | Crystal Structure Of The Hspbp1 Core Domain Complex | 5e-59 | ||
| 2v7y_A | 509 | Crystal Structure Of The Molecular Chaperone Dnak F | 6e-59 | ||
| 2kho_A | 605 | Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAP | 8e-59 | ||
| 4b9q_A | 605 | Open Conformation Of Atp-Bound Hsp70 Homolog Dnak L | 8e-57 | ||
| 3kvg_A | 400 | Crystal Structure Of The N-Terminal Domain Of Hsp70 | 1e-56 | ||
| 3gl1_A | 387 | Crystal Structure Of Atpase Domain Of Ssb1 Chaperon | 9e-53 | ||
| 3iuc_A | 408 | Crystal Structure Of The Human 70kda Heat Shock Pro | 8e-49 | ||
| 3ldl_A | 384 | Crystal Structure Of Human Grp78 (70kda Heat Shock | 1e-48 | ||
| 3qfp_A | 390 | Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE D | 5e-48 | ||
| 3qfu_A | 394 | Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXE | 5e-48 | ||
| 1ckr_A | 159 | High Resolution Solution Structure Of The Heat Shoc | 1e-45 | ||
| 3h0x_A | 152 | Crystal Structure Of Peptide-Binding Domain Of Kar2 | 3e-41 | ||
| 3dob_A | 152 | Peptide-Binding Domain Of Heat Shock 70 Kda Protein | 2e-35 | ||
| 2op6_A | 152 | Peptide-Binding Domain Of Heat Shock 70 Kda Protein | 4e-32 | ||
| 3n8e_A | 182 | Substrate Binding Domain Of The Human Heat Shock 70 | 6e-28 | ||
| 1dkg_D | 383 | Crystal Structure Of The Nucleotide Exchange Factor | 1e-27 | ||
| 3dpo_A | 219 | Crystal Structure Of The Substrate Binding Domain O | 3e-26 | ||
| 1dky_A | 219 | The Substrate Binding Domain Of Dnak In Complex Wit | 4e-26 | ||
| 1dkx_A | 219 | The Substrate Binding Domain Of Dnak In Complex Wit | 5e-26 | ||
| 3dqg_A | 151 | Peptide-Binding Domain Of Heat Shock 70 Kda Protein | 7e-26 | ||
| 1bpr_A | 191 | Nmr Structure Of The Substrate Binding Domain Of Dn | 5e-25 | ||
| 3d2f_A | 675 | Crystal Structure Of A Complex Of Sse1p And Hsp70 L | 3e-22 | ||
| 3d2e_A | 675 | Crystal Structure Of A Complex Of Sse1p And Hsp70, | 8e-22 | ||
| 3c7n_A | 668 | Structure Of The Hsp110:hsc70 Nucleotide Exchange C | 1e-19 | ||
| 2qxl_A | 658 | Crystal Structure Analysis Of Sse1, A Yeast Hsp110 | 1e-19 | ||
| 1dg4_A | 115 | Nmr Structure Of The Substrate Binding Domain Of Dn | 2e-19 | ||
| 1q5l_A | 135 | Nmr Structure Of The Substrate Binding Domain Of Dn | 8e-19 | ||
| 2p32_A | 120 | Crystal Structure Of The C-Terminal 10 Kda Subdomai | 7e-12 | ||
| 1u00_A | 227 | Hsca Substrate Binding Domain Complexed With The Is | 1e-11 | ||
| 4gni_A | 409 | Structure Of The Ssz1 Atpase Bound To Atp And Magne | 6e-11 | ||
| 1ud0_A | 113 | Crystal Structure Of The C-Terminal 10-Kda Subdomai | 1e-10 | ||
| 3lof_A | 113 | C-Terminal Domain Of Human Heat Shock 70kda Protein | 6e-10 | ||
| 2lmg_A | 75 | Solution Structure Of The C-Terminal Domain (537-61 | 3e-09 |
| >pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A MUTANT Length = 554 | Back alignment and structure |
|
| >pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 554 | Back alignment and structure |
| >pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein From Rattus Norvegicus In Post-Atp Hydrolysis State Length = 543 | Back alignment and structure |
| >pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 394 | Back alignment and structure |
| >pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal Mutant With Cys 17 Replaced By Lys Length = 386 | Back alignment and structure |
| >pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 386 | Back alignment and structure |
| >pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal 1nge 3 Length = 386 | Back alignment and structure |
| >pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 | Back alignment and structure |
| >pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences The Structure Of The Active Site But Is Not Essential For Atp Hydrolysis Length = 386 | Back alignment and structure |
| >pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular Chaperone Hsc70. Ii. Potassium Binds Specifically In The Atpase Active Site Length = 386 | Back alignment and structure |
| >pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate Protein Atp Hydrolytic Activity, Ii. Structure Of The Active Site With Adp Or Atp Bound To Wild Type And Mutant Atpase Fragment Length = 386 | Back alignment and structure |
| >pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant Length = 381 | Back alignment and structure |
| >pdb|3CQX|A Chain A, Chaperone Complex Length = 386 | Back alignment and structure |
| >pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant Length = 381 | Back alignment and structure |
| >pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant Length = 381 | Back alignment and structure |
| >pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70 Length = 381 | Back alignment and structure |
| >pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The Hsc70 Atpase Domain Length = 400 | Back alignment and structure |
| >pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP Length = 381 | Back alignment and structure |
| >pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 | Back alignment and structure |
| >pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 | Back alignment and structure |
| >pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6 (Hsp70b') Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 403 | Back alignment and structure |
| >pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein Length = 378 | Back alignment and structure |
| >pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In Complex With Amp-Pnp Length = 391 | Back alignment and structure |
| >pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The Apo Form Length = 391 | Back alignment and structure |
| >pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And Hsp70 Nbd Length = 392 | Back alignment and structure |
| >pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a (Hsp70-1) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 409 | Back alignment and structure |
| >pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 382 | Back alignment and structure |
| >pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 382 | Back alignment and structure |
| >pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain Length = 382 | Back alignment and structure |
| >pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1 Length = 380 | Back alignment and structure |
| >pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1-Like Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 408 | Back alignment and structure |
| >pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2 (Hsp70-2) Atpase Domain In Complex With Adp And Inorganic Phosphate Length = 404 | Back alignment and structure |
| >pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2) From Homo Sapiens At 1.80 A Resolution Length = 387 | Back alignment and structure |
| >pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With The Fragment Of Hsp70 Atpase Domain Length = 191 | Back alignment and structure |
| >pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis State Length = 509 | Back alignment and structure |
| >pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE (1-605) Complexed With Adp And Substrate Length = 605 | Back alignment and structure |
| >pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak Length = 605 | Back alignment and structure |
| >pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 (Cgd2_20) From Cryptosporidium Parvum In Complex With Amppnp Length = 400 | Back alignment and structure |
| >pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A Member Of The Hsp70 Family, From Saccharomyces Cerevisiae Length = 387 | Back alignment and structure |
| >pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5 (BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP Length = 408 | Back alignment and structure |
| >pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein 5 BIP) Atpase Domain In Complex With Atp Length = 384 | Back alignment and structure |
| >pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN Length = 390 | Back alignment and structure |
| >pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock Cognate-70 Kd Substrate Binding Domain Obtained By Multidimensional Nmr Techniques Length = 159 | Back alignment and structure |
| >pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2 Protein From Saccharomyces Cerevisiae Length = 152 | Back alignment and structure |
| >pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F44e5.5 From C.Elegans. Length = 152 | Back alignment and structure |
| >pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D Precursor From C.Elegans Length = 152 | Back alignment and structure |
| >pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda Prote (Mortalin) Length = 182 | Back alignment and structure |
| >pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe Bound To The Atpase Domain Of The Molecular Chaperone Dnak Length = 383 | Back alignment and structure |
| >pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E. Coli Dnak In Complex With A Short Pyrrhocoricin-Derived Inhibitor Peptide Length = 219 | Back alignment and structure |
| >pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 2 Native Crystals Length = 219 | Back alignment and structure |
| >pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A Substrate Peptide, Determined From Type 1 Selenomethionyl Crystals Length = 219 | Back alignment and structure |
| >pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F, Mitochondrial Precursor, From Caenorhabditis Elegans. Length = 151 | Back alignment and structure |
| >pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized Average Structure Length = 191 | Back alignment and structure |
| >pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70 Length = 675 | Back alignment and structure |
| >pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70, Selenomethionine- Labeled Crystals Length = 675 | Back alignment and structure |
| >pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex Length = 668 | Back alignment and structure |
| >pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110 Length = 658 | Back alignment and structure |
| >pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In The Apo Form Length = 115 | Back alignment and structure |
| >pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak Bound To The Peptide Nrllltg Length = 135 | Back alignment and structure |
| >pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From C. Elegans Hsp70 Length = 120 | Back alignment and structure |
| >pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu Recognition Peptide Elppvkihc Length = 227 | Back alignment and structure |
| >pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium Length = 409 | Back alignment and structure |
| >pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of Hsc70 Length = 113 | Back alignment and structure |
| >pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b. Length = 113 | Back alignment and structure |
| >pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of Human Heat Shock Protein 70 Length = 75 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* Length = 554 | Back alignment and structure |
|---|
Score = 650 bits (1679), Expect = 0.0
Identities = 259/384 (67%), Positives = 287/384 (74%), Gaps = 69/384 (17%)
Query: 1 MRIINEPTAAAIAYGLDNKASR--------------------------TVKATAGDTHLG 34
+RIINEPTAAAIAYGLD K VK+TAGDTHLG
Sbjct: 170 LRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLG 229
Query: 35 GEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYE 80
GEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL+T +IEIDSLYE
Sbjct: 230 GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE 289
Query: 81 GIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQL 140
GIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLVGGSTRIPK+Q+L
Sbjct: 290 GIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKL 349
Query: 141 LQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLGIETAG-- 198
LQDFFNGKEL KSINPDEAVAYGAAVQAAILSG+ ++ VQDLLLLDVTPLSLGIETAG
Sbjct: 350 LQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGV 409
Query: 199 -----------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPR 235
DN+P VLIQVYEGERA TKDNNLLGKFEL GIPPAPR
Sbjct: 410 MTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPR 469
Query: 236 GVPQINVCFDIDANGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAED 291
GVPQI V FDIDANGIL+VSA DK+ G ITITNDKGRLSKE+IERMVQEAEKYKAED
Sbjct: 470 GVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAED 529
Query: 292 EEIKKKVEAKNSLENYAYNMSNTV 315
E+ + KV +KNSLE+YA+NM TV
Sbjct: 530 EKQRDKVSSKNSLESYAFNMKATV 553
|
| >3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* Length = 675 | Back alignment and structure |
|---|
| >2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} Length = 605 | Back alignment and structure |
|---|
| >2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} Length = 509 | Back alignment and structure |
|---|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* 1ngf_A* ... Length = 404 | Back alignment and structure |
|---|
| >3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} Length = 152 | Back alignment and structure |
|---|
| >3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A Length = 152 | Back alignment and structure |
|---|
| >2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} Length = 152 | Back alignment and structure |
|---|
| >4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A Length = 219 | Back alignment and structure |
|---|
| >1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 Length = 383 | Back alignment and structure |
|---|
| >3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} Length = 182 | Back alignment and structure |
|---|
| >1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 Length = 227 | Back alignment and structure |
|---|
| >3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} Length = 151 | Back alignment and structure |
|---|
| >1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 Length = 135 | Back alignment and structure |
|---|
| >2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} Length = 120 | Back alignment and structure |
|---|
| >1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 Length = 113 | Back alignment and structure |
|---|
| >3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A Length = 113 | Back alignment and structure |
|---|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} Length = 272 | Back alignment and structure |
|---|
| >2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A Length = 320 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} Length = 515 | Back alignment and structure |
|---|
| >2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A Length = 484 | Back alignment and structure |
|---|
| >3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* Length = 511 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 412 | |||
| 4b9q_A | 605 | Chaperone protein DNAK; HET: ATP; 2.40A {Escherich | 100.0 | |
| 3d2f_A | 675 | Heat shock protein homolog SSE1; nucleotide exchan | 100.0 | |
| 2kho_A | 605 | Heat shock protein 70; molecular chaperone, HSP70, | 100.0 | |
| 1yuw_A | 554 | Heat shock cognate 71 kDa protein; chaperone; 2.60 | 100.0 | |
| 2v7y_A | 509 | Chaperone protein DNAK; HSP70, heat shock protein, | 100.0 | |
| 4e81_A | 219 | Chaperone protein DNAK; chaperone; 1.90A {Escheric | 100.0 | |
| 1u00_A | 227 | HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A | 99.97 | |
| 3i33_A | 404 | Heat shock-related 70 kDa protein 2; protein-ADP c | 99.95 | |
| 4gni_A | 409 | Putative heat shock protein; HSP70-type ATPase, AT | 99.95 | |
| 3qfu_A | 394 | 78 kDa glucose-regulated protein homolog; HSP70, K | 99.95 | |
| 3n8e_A | 182 | Stress-70 protein, mitochondrial; beta-sandwich, h | 99.94 | |
| 1dkg_D | 383 | Molecular chaperone DNAK; HSP70, GRPE, nucleotide | 99.93 | |
| 3h0x_A | 152 | 78 kDa glucose-regulated protein homolog; structur | 99.9 | |
| 3dob_A | 152 | Heat shock 70 kDa protein F44E5.5; structural geno | 99.89 | |
| 3dqg_A | 151 | Heat shock 70 kDa protein F; structural genomics, | 99.88 | |
| 2op6_A | 152 | Heat shock 70 kDa protein D; HSP70/peptide-binding | 99.85 | |
| 1jce_A | 344 | ROD shape-determining protein MREB; MBL, actin, HS | 99.82 | |
| 3lof_A | 113 | Heat shock 70 kDa protein 1; structural genomics, | 99.73 | |
| 1ud0_A | 113 | HSC70, 70 kDa heat-shock-like protein; chaperone; | 99.67 | |
| 1q5l_A | 135 | Chaperone protein DNAK; HSP70, chaperone, heat sho | 99.63 | |
| 2p32_A | 120 | Heat shock 70 kDa protein A; three-helix bundle, c | 99.59 | |
| 4a2a_A | 419 | Cell division protein FTSA, putative; cell cycle, | 99.49 | |
| 3h1q_A | 272 | Ethanolamine utilization protein EUTJ; ethanolamin | 99.42 | |
| 2fsj_A | 346 | Hypothetical protein TA0583; actin homologs, archa | 99.41 | |
| 2ych_A | 377 | Competence protein PILM; cell cycle, type IV pilus | 99.35 | |
| 2zgy_A | 320 | Plasmid segregation protein PARM; plasmid partitio | 99.29 | |
| 4ehu_A | 276 | Activator of 2-hydroxyisocaproyl-COA dehydratase; | 99.25 | |
| 2fxu_A | 375 | Alpha-actin-1, actin, alpha skeletal muscle; actin | 99.17 | |
| 1k8k_A | 418 | ARP3, actin-like protein 3, actin-2; beta-propelle | 99.16 | |
| 3js6_A | 355 | Uncharacterized PARM protein; partition, segregati | 98.7 | |
| 1k8k_B | 394 | ARP2, actin-like protein 2; beta-propeller, struct | 98.52 | |
| 4apw_A | 329 | ALP12; actin-like protein; 19.70A {Clostridium tet | 98.37 | |
| 3dwl_A | 427 | Actin-related protein 3; propellor, actin-binding, | 97.11 | |
| 1hux_A | 270 | Activator of (R)-2-hydroxyglutaryl-COA dehydratase | 97.08 | |
| 2d0o_A | 610 | DIOL dehydratase-reactivating factor large subunit | 96.9 | |
| 3l0q_A | 554 | Xylulose kinase; xlylulose kinase, SGX, PSI, struc | 96.89 | |
| 4bc3_A | 538 | Xylulose kinase; transferase, glucuronate xyluloki | 96.77 | |
| 2itm_A | 484 | Xylulose kinase, xylulokinase; ATPase, FGGY kinase | 96.68 | |
| 3ll3_A | 504 | Gluconate kinase; xylulose kinase, nysgx, ATP, ADP | 96.66 | |
| 1nbw_A | 607 | Glycerol dehydratase reactivase alpha subunit; mol | 96.66 | |
| 2zf5_O | 497 | Glycerol kinase; hyperthermophilic archaeon, ATP-b | 96.66 | |
| 3i8b_A | 515 | Xylulose kinase; strain ATCC 15703 / DSM 20083, 11 | 96.6 | |
| 3ezw_A | 526 | Glycerol kinase; glycerol metabolism, allosteric r | 96.59 | |
| 3hz6_A | 511 | Xylulokinase; xylulose, structural genomic, chromo | 96.56 | |
| 3jvp_A | 572 | Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, su | 96.44 | |
| 3g25_A | 501 | Glycerol kinase; IDP00743, ATP-binding, glycerol m | 96.38 | |
| 4e1j_A | 520 | Glycerol kinase; structural genomics, PSI-biology, | 96.3 | |
| 2dpn_A | 495 | Glycerol kinase; thermus thermophilus HB8, structu | 96.28 | |
| 3h3n_X | 506 | Glycerol kinase; ATP-binding, glycerol metabolism, | 96.24 | |
| 2p3r_A | 510 | Glycerol kinase; glycerol metabolism, allosteric r | 96.24 | |
| 3ifr_A | 508 | Carbohydrate kinase, FGGY; xylulose kinase, SGX, s | 96.17 | |
| 2d4w_A | 504 | Glycerol kinase; alpha and beta protein, ribonucle | 96.09 | |
| 2w40_A | 503 | Glycerol kinase, putative; closed conformation, ma | 95.83 | |
| 2ews_A | 287 | Pantothenate kinase; PANK, structural genomics, st | 95.78 | |
| 2uyt_A | 489 | Rhamnulokinase; rhamnose degradation, IN-LINE phos | 95.37 | |
| 3qb0_A | 498 | Actin-related protein 4; actin fold, ATP binding, | 94.62 | |
| 4fo0_A | 593 | Actin-related protein 8; chromatin remodeling, nuc | 94.24 | |
| 3h6e_A | 482 | Carbohydrate kinase, FGGY; novosphingobium aromati | 93.97 | |
| 2i7n_A | 360 | Pantothenate kinase 1; PANK, transferase; HET: ACO | 93.79 | |
| 2e2o_A | 299 | Hexokinase; acetate and sugar kinases, HSP70, acti | 83.57 | |
| 3qbx_A | 371 | Anhydro-N-acetylmuramic acid kinase; acetate and s | 81.78 | |
| 2ivn_A | 330 | O-sialoglycoprotein endopeptidase; UP1 keops compl | 80.09 |
| >4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-61 Score=504.46 Aligned_cols=363 Identities=47% Similarity=0.751 Sum_probs=333.7
Q ss_pred CcccchhHHHHHHhcccCCC-CC----------------------------eEEEecCCCCCchHHHHHHHHHHHHHHHH
Q 041209 1 MRIINEPTAAAIAYGLDNKA-SR----------------------------TVKATAGDTHLGGEDFDNRLVNHFVAEFK 51 (412)
Q Consensus 1 v~li~EPtAAAl~y~~~~~~-~~----------------------------~Vla~~gd~~lGG~d~D~~l~~~~~~~~~ 51 (412)
++||+||+|||++|++.... +. +|+++.||.+|||++||.+|++|+.++|+
T Consensus 166 ~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~ 245 (605)
T 4b9q_A 166 KRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 245 (605)
T ss_dssp EEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHh
Confidence 47999999999999987643 11 58999999999999999999999999999
Q ss_pred hhccCCCcccHHHHHHhhc--------------ceEEeeecccC----ceeEEEEeHHHHHHHHHHHHHHHHHHHHHHHh
Q 041209 52 RKHKKDISGNARALRRLQT--------------TTIEIDSLYEG----IDFYATITRARFEELNMDLFRKCMEPVEKCLR 113 (412)
Q Consensus 52 ~~~~~~~~~~~~~~~~l~~--------------~~i~i~~~~~~----~~~~~~itr~efe~~~~~~~~~~~~~i~~~l~ 113 (412)
.+++.++..+++++.+|+. +.+.++.+..+ .++.++|||++|+++++|+++++..+++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~ 325 (605)
T 4b9q_A 246 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQ 325 (605)
T ss_dssp HHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888887766 34555554433 67889999999999999999999999999999
Q ss_pred hcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHHHHHhCCCCccccceEEEeccCcccc
Q 041209 114 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNKKVQDLLLLDVTPLSLG 193 (412)
Q Consensus 114 ~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a~~l~~~~~~~~~~~~~~dv~~~s~g 193 (412)
++++.+.+|+.|+||||+||||+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++.+.|++|++||
T Consensus 326 ~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~slg 400 (605)
T 4b9q_A 326 DAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLG 400 (605)
T ss_dssp HTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSSCEE
T ss_pred HcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeeeEEE
Confidence 99999999999999999999999999999999 7888999999999999999999999964 578999999999999
Q ss_pred ccccC-------------------------CCCCeEEEEEeecccccccCCceeeEEEEeCCCCCCCCCCeEEEEEEecC
Q 041209 194 IETAG-------------------------DNRPSVLIQVYEGERARTKDNNLLGKFELKGIPPAPRGVPQINVCFDIDA 248 (412)
Q Consensus 194 i~~~~-------------------------d~q~~i~i~i~eG~~~~~~~n~~l~~~~l~~i~~~~~g~~~i~v~f~id~ 248 (412)
|++.+ |+|+.+.|+||||++..+.+|..||+|.++|+||.|+|.++|+|+|++|.
T Consensus 401 ie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~ 480 (605)
T 4b9q_A 401 IETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDA 480 (605)
T ss_dssp EEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECT
T ss_pred EEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcC
Confidence 99865 89999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEeccCC----ceeecCCCCCCHHHHHHHHHHHHHHhhhcHHHHHHHHHHhhHHHHHHhhhhhcchhhhhcCC
Q 041209 249 NGILHVSAKDKTAG----ITITNDKGRLSKEEIERMVQEAEKYKAEDEEIKKKVEAKNSLENYAYNMSNTVRDEKFAGKL 324 (412)
Q Consensus 249 ~g~l~v~a~~~~t~----i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~lE~~i~~~r~~l~~~~~~~~~ 324 (412)
||+|+|++.++.|+ ++|++. ..||+++|++++++++++..+|+..+++.++||+||+|+|.+++.+++ +..++
T Consensus 481 ~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~--~~~~~ 557 (605)
T 4b9q_A 481 DGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEE--AGDKL 557 (605)
T ss_dssp TSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HGGGS
T ss_pred CcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhC
Confidence 99999999999988 778776 579999999999999999999999999999999999999999999985 77899
Q ss_pred CHHhHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHh
Q 041209 325 DPADKQKIEKAIDEAIEWLDGNQLVEVDELEDKLKELKGFCNPIIAKMYE 374 (412)
Q Consensus 325 ~~~e~~~i~~~l~~~~~wl~~~~~~~~~~~~~~~~~L~~~~~~i~~r~~e 374 (412)
++++++.+...++++++||+.+ +.++|++++++|++.+.++..++++
T Consensus 558 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 558 PADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999975 6899999999999999999999875
|
| >3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A* | Back alignment and structure |
|---|
| >2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli} | Back alignment and structure |
|---|
| >1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A* | Back alignment and structure |
|---|
| >2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A | Back alignment and structure |
|---|
| >1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 | Back alignment and structure |
|---|
| >3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ... | Back alignment and structure |
|---|
| >4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var} | Back alignment and structure |
|---|
| >3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 | Back alignment and structure |
|---|
| >3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A | Back alignment and structure |
|---|
| >3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A | Back alignment and structure |
|---|
| >3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A | Back alignment and structure |
|---|
| >1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1 | Back alignment and structure |
|---|
| >1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1 | Back alignment and structure |
|---|
| >2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A* | Back alignment and structure |
|---|
| >3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid} | Back alignment and structure |
|---|
| >2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A* | Back alignment and structure |
|---|
| >2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A | Back alignment and structure |
|---|
| >4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A | Back alignment and structure |
|---|
| >2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... | Back alignment and structure |
|---|
| >1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A | Back alignment and structure |
|---|
| >3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus} | Back alignment and structure |
|---|
| >1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* | Back alignment and structure |
|---|
| >4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani} | Back alignment and structure |
|---|
| >3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5 | Back alignment and structure |
|---|
| >2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A | Back alignment and structure |
|---|
| >3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A* | Back alignment and structure |
|---|
| >4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A* | Back alignment and structure |
|---|
| >2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A | Back alignment and structure |
|---|
| >3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A* | Back alignment and structure |
|---|
| >1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 | Back alignment and structure |
|---|
| >2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
| >3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703} | Back alignment and structure |
|---|
| >3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y* | Back alignment and structure |
|---|
| >3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A* | Back alignment and structure |
|---|
| >3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A* | Back alignment and structure |
|---|
| >4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O | Back alignment and structure |
|---|
| >3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum} | Back alignment and structure |
|---|
| >2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP} | Back alignment and structure |
|---|
| >2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A* | Back alignment and structure |
|---|
| >2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 | Back alignment and structure |
|---|
| >2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A* | Back alignment and structure |
|---|
| >3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
| >2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* | Back alignment and structure |
|---|
| >2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A* | Back alignment and structure |
|---|
| >3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A* | Back alignment and structure |
|---|
| >2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 412 | ||||
| d1bupa2 | 193 | c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATP | 1e-61 | |
| d1dkgd2 | 198 | c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATP | 2e-58 | |
| d1yuwa1 | 159 | b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus | 2e-55 | |
| d1dkza2 | 118 | b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxI | 3e-33 | |
| d1ud0a_ | 84 | a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: | 8e-30 | |
| d1u00a2 | 115 | b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc6 | 5e-27 | |
| d1dkza1 | 97 | a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: | 5e-21 | |
| d1u00a1 | 112 | a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) | 3e-19 | |
| d1jcea2 | 196 | c.55.1.1 (A:141-336) Prokaryotic actin homolog Mre | 1e-18 | |
| d2zgya2 | 163 | c.55.1.1 (A:158-320) Plasmid segregation protein P | 6e-14 | |
| d1bupa1 | 185 | c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPas | 4e-05 | |
| d1dkgd1 | 183 | c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPas | 7e-05 |
| >d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 193 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Heat shock protein 70kDa, ATPase fragment species: Cow (Bos taurus) [TaxId: 9913]
Score = 195 bits (497), Expect = 1e-61
Identities = 124/164 (75%), Positives = 138/164 (84%), Gaps = 14/164 (8%)
Query: 23 TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRL-------------- 68
VK+TAGDTHLGGEDFDNR+VNHF+AEFKRKHKKDIS N RA+RRL
Sbjct: 30 EVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSS 89
Query: 69 QTTTIEIDSLYEGIDFYATITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLV 128
+IEIDSLYEGIDFY +ITRARFEELN DLFR ++PVEK LRD+K+DKSQ+HD+VLV
Sbjct: 90 TQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLV 149
Query: 129 GGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 172
GGSTRIPK+Q+LLQDFFNGKEL KSINPDEAVAYGAAVQAAILS
Sbjct: 150 GGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 193
|
| >d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 198 | Back information, alignment and structure |
|---|
| >d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159 | Back information, alignment and structure |
|---|
| >d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} Length = 118 | Back information, alignment and structure |
|---|
| >d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 84 | Back information, alignment and structure |
|---|
| >d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
| >d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} Length = 97 | Back information, alignment and structure |
|---|
| >d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} Length = 112 | Back information, alignment and structure |
|---|
| >d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} Length = 196 | Back information, alignment and structure |
|---|
| >d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} Length = 163 | Back information, alignment and structure |
|---|
| >d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} Length = 185 | Back information, alignment and structure |
|---|
| >d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} Length = 183 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 412 | |||
| d1bupa2 | 193 | Heat shock protein 70kDa, ATPase fragment {Cow (Bo | 99.96 | |
| d1dkgd2 | 198 | Heat shock protein 70kDa, ATPase fragment {Escheri | 99.96 | |
| d1yuwa1 | 159 | DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.92 | |
| d1dkza2 | 118 | DnaK {Escherichia coli [TaxId: 562]} | 99.73 | |
| d1u00a2 | 115 | Chaperone protein hscA (Hsc66) {Escherichia coli [ | 99.69 | |
| d1jcea2 | 196 | Prokaryotic actin homolog MreB {Thermotoga maritim | 99.64 | |
| d1ud0a_ | 84 | DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} | 99.61 | |
| d1u00a1 | 112 | Chaperone protein hscA (Hsc66) {Escherichia coli [ | 99.21 | |
| d1dkza1 | 97 | DnaK {Escherichia coli [TaxId: 562]} | 99.18 | |
| d1e4ft2 | 191 | Cell division protein FtsA {Thermotoga maritima [T | 98.66 | |
| d2zgya2 | 163 | Plasmid segregation protein ParM {Escherichia coli | 98.59 | |
| d2fsja1 | 161 | Hypothetical protein Ta0583 {Archaeon Thermoplasma | 98.02 | |
| d1huxa_ | 259 | Hydroxyglutaryl-CoA dehydratase component A {Acida | 97.34 | |
| d1k8ka2 | 258 | Actin-related protein 3, Arp3 {Cow (Bos taurus) [T | 96.6 | |
| d2p3ra2 | 247 | Glycerol kinase {Escherichia coli [TaxId: 562]} | 96.54 | |
| d1r59o2 | 235 | Glycerol kinase {Enterococcus casseliflavus [TaxId | 96.41 | |
| d2fxua2 | 225 | Actin {Cow (Bos taurus) [TaxId: 9913]} | 95.64 | |
| d1k8kb1 | 190 | Actin-related protein 2, Arp2 {Cow (Bos taurus) [T | 93.97 | |
| d2ewsa1 | 267 | Type II pantothenate kinase, CoaW {Staphylococcus | 93.19 | |
| d2hoea2 | 169 | N-acetylglucosamine kinase {Thermotoga maritima [T | 85.24 | |
| d2aa4a2 | 170 | N-acetylmannosamine kinase NanK {Escherichia coli | 83.1 | |
| d1z05a2 | 197 | Transcriptional regulator VC2007 {Vibrio cholerae | 82.96 | |
| d2ap1a1 | 186 | Putative regulator protein YcfX {Salmonella typhim | 82.19 |
| >d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribonuclease H-like motif superfamily: Actin-like ATPase domain family: Actin/HSP70 domain: Heat shock protein 70kDa, ATPase fragment species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=1.3e-29 Score=226.25 Aligned_cols=150 Identities=83% Similarity=1.249 Sum_probs=140.3
Q ss_pred eEEEecCCCCCchHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHhhc--------------ceEEeeecccCceeEEEE
Q 041209 23 TVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLQT--------------TTIEIDSLYEGIDFYATI 88 (412)
Q Consensus 23 ~Vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------~~i~i~~~~~~~~~~~~i 88 (412)
+|+++.|+..+||++||++|++|+.++|..+++.++..+++++.+|+. +.+.++.+..+.++.++|
T Consensus 30 ~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~~~~~~~~~~~~~~~~i 109 (193)
T d1bupa2 30 EVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSI 109 (193)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHHTTSSEEEEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHhhccCCCceEEEEEecccCCCccceEE
Confidence 789999999999999999999999999999999888888887777765 567777778888999999
Q ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEecCCcCcHHHHHHHHHhhCCCcccccCCCchhHHhHHHHHH
Q 041209 89 TRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQA 168 (412)
Q Consensus 89 tr~efe~~~~~~~~~~~~~i~~~l~~a~~~~~~id~V~LvGGssriP~V~~~l~~~f~~~~~~~~~~pd~aVA~GAa~~a 168 (412)
||++|+++++|+++++..+++++|.++++.+.+|+.|+||||+||+|+|++.|+++|++.++..++||++|||+|||++|
T Consensus 110 tr~~~e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~i~~~f~~~~i~~~~~p~~aVa~GaA~~a 189 (193)
T d1bupa2 110 TRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 189 (193)
T ss_dssp EHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCGGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987888889999999999999999
Q ss_pred HHHh
Q 041209 169 AILS 172 (412)
Q Consensus 169 ~~l~ 172 (412)
+++|
T Consensus 190 a~ls 193 (193)
T d1bupa2 190 AILS 193 (193)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 9885
|
| >d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
| >d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]} | Back information, alignment and structure |
|---|
| >d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d2hoea2 c.55.1.10 (A:200-368) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2aa4a2 c.55.1.10 (A:120-289) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d2ap1a1 c.55.1.10 (A:118-303) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|