Citrus Sinensis ID: 041389

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-----
Protein Sequence
MENPESLEEGLIAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE
Secondary Structure (PSIPRED)
cccccccHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEcccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHcccccccccccccccEcccccccccccccccccccEEEEEEEEEEEEEccccccEEcccccHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
menpesleegliaksslaqpnpikitnevgersglpesdnssatpVVVLSTLVAICGSfahgcsvgyssaaesgmradlglsvte
Flexible Loop (DISEMBL)
MENPESLEEGliaksslaqpnpiKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSaaesgmradlglsvte
Low Complexity Region (SEG)
MENPESLEEGLIAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE
Disordered region (IsUnstruct)
********************************************PVVVLSTLVAICGSFAHGCSVGY******************
Disordered Region (DISOPRED)
*********************************************VVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLS***
Disordered Region (DISEMBL)
*********GLIAKSSLAQPNPIKITNEVGE***********ATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE
Disordered Region (DISPRO)
****************************************SSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLS***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MENPESLEEGLIAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	85	2.2.26 [Sep-21-2011]
Q94KE0	470	Sugar transporter ERD6-li	yes	no	0.776	0.140	0.380	2e-08
O04036	496	Sugar transporter ERD6 OS	no	no	0.976	0.167	0.408	8e-08
Q94CI7	474	Sugar transporter ERD6-li	no	no	0.788	0.141	0.376	6e-07
Q8LBI9	482	Sugar transporter ERD6-li	no	no	0.576	0.101	0.489	1e-06
Q94CI6	478	Sugar transporter ERD6-li	no	no	0.576	0.102	0.470	2e-06
Q93Z80	458	Sugar transporter ERD6-li	no	no	0.576	0.106	0.428	2e-06
Q94AF9	467	Sugar transporter ERD6-li	no	no	0.576	0.104	0.408	2e-06
P93051	463	Sugar transporter ERD6-li	no	no	0.776	0.142	0.391	3e-06
Q4F7G0	462	Sugar transporter ERD6-li	no	no	0.576	0.106	0.469	0.0002
Q9SCW7	464	Sugar transporter ERD6-li	no	no	0.541	0.099	0.5	0.0003

>sp|Q94KE0|ERDL3_ARATH Sugar transporter ERD6-like 3 OS=Arabidopsis thaliana GN=SUGTL2 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 18/84 (21%)

Query: 2  ENPESLEEGLIAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAH 61
          EN  +LE GL+ + +    N  +IT                   VV+ ST V++CGSF  
Sbjct: 5  ENSRNLEAGLLLRKNQNDINECRIT------------------AVVLFSTFVSVCGSFCF 46

Query: 62 GCSVGYSSAAESGMRADLGLSVTE 85
          GC+ GYSS A++G+  DLGLSV +
Sbjct: 47 GCAAGYSSVAQTGIINDLGLSVAQ 70

Sugar transporter.
Arabidopsis thaliana (taxid: 3702)

>sp|O04036|ERD6_ARATH Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 15/98 (15%)

Query: 1  MENPESLEEGLIAKSSLAQPNPIKITNE-VGERSGL----------PESDNS--SATPVV 47
          ME  +S+E+GL+ KS   +    K  NE     SGL          P++D+     T  V
Sbjct: 1  MERQKSMEKGLLRKSLSIRER--KFPNEDAFLESGLSRKSPREVKKPQNDDGECRVTASV 58

Query: 48 VLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
           LST VA+ GSF  GC VG+SS A++G+  DL LSV E
Sbjct: 59 FLSTFVAVSGSFCTGCGVGFSSGAQAGITKDLSLSVAE 96

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94CI7|EDL17_ARATH Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 18/85 (21%)

Query: 1  MENPESLEEGLIAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFA 60
          ME   S+EEGL+          +K  N+  E            T  V+LST VA+CGSF+
Sbjct: 3  MEEGRSIEEGLLQ---------LKNKNDDSE---------CRITACVILSTFVAVCGSFS 44

Query: 61 HGCSVGYSSAAESGMRADLGLSVTE 85
           G + GY+S AE+G+  DL LS+ +
Sbjct: 45 FGVATGYTSGAETGVMKDLDLSIAQ 69

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LBI9|EDL16_ARATH Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%)

Query: 37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          ES+N+ +  +V+ ST VA+CGSF  G  VGYS+  +S +R DL LS+ E
Sbjct: 34 ESENNESYLMVLFSTFVAVCGSFEFGSCVGYSAPTQSSIRQDLNLSLAE 82

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94CI6|EDL18_ARATH Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 2/51 (3%)

Query: 37 ESDNSSA--TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          ++D+S    T  V+LST +A+CGSF+ G S+GY+S AE G+  DL LS+ +
Sbjct: 23 QNDDSECRITACVILSTFIAVCGSFSFGVSLGYTSGAEIGIMKDLDLSIAQ 73

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93Z80|EDL10_ARATH Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 34/49 (69%)

Query: 37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          + D+   T  V+LST VA+C SF++GC+ GY+S AE+ +  +L LS+ +
Sbjct: 11 DRDDRRITACVILSTFVAVCSSFSYGCANGYTSGAETAIMKELDLSMAQ 59

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94AF9|EDL11_ARATH Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 34/49 (69%)

Query: 37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          + D+   T  V+LST VA+C +F++GC+ GY+S AE+ +  +L LS+ +
Sbjct: 20 DRDDRRITACVILSTFVAVCSAFSYGCAAGYTSGAETAIMKELDLSMAQ 68

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|P93051|ERDL7_ARATH Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 8/74 (10%)

Query: 12 IAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAA 71
          ++K+S A   P+   N  G +   P         +V LST VA+CGSFA G   GYSS A
Sbjct: 1  MSKASDAVREPLVDKNMAGSKPDQPW--------MVYLSTFVAVCGSFAFGSCAGYSSPA 52

Query: 72 ESGMRADLGLSVTE 85
          ++ +R DL L++ E
Sbjct: 53 QAAIRNDLSLTIAE 66

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q4F7G0|ERDL2_ARATH Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 34/49 (69%)

Query: 37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          E + SS T  ++LST V + GSF +GC++ YSS A+S +  +LGLSV +
Sbjct: 15 EEEASSFTSGLLLSTSVVVAGSFCYGCAMSYSSPAQSKIMEELGLSVAD 63

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SCW7|ERDL1_ARATH Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2

 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 40 NSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          +SS T  ++LST VA+ GSF +GC++ YSS A+S +  +LGLSV +
Sbjct: 20 SSSITCGLLLSTSVAVTGSFVYGCAMSYSSPAQSKIMEELGLSVAD 65

Sugar transporter.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
224130930	478	predicted protein [Populus trichocarpa]	0.564	0.100	0.687	2e-11
255542516	476	sugar transporter, putative [Ricinus com	0.847	0.151	0.493	6e-11
298205032	488	unnamed protein product [Vitis vinifera]	0.964	0.168	0.546	1e-10
359487982	491	PREDICTED: sugar transporter ERD6-like 5	0.964	0.167	0.546	1e-10
224131486	487	predicted protein [Populus trichocarpa]	0.541	0.094	0.695	4e-10
224125378	475	predicted protein [Populus trichocarpa]	0.729	0.130	0.539	6e-10
255542518	492	D-xylose-proton symporter, putative [Ric	0.552	0.095	0.574	3e-08
359487977	920	PREDICTED: sugar transporter ERD6-like 5	0.494	0.045	0.666	1e-07
310877858	477	putative ERD6-like transporter [Vitis vi	0.494	0.088	0.666	1e-07
298205028	476	unnamed protein product [Vitis vinifera]	0.494	0.088	0.666	1e-07

>gi|224130930|ref|XP_002328411.1| predicted protein [Populus trichocarpa] gi|222838126|gb|EEE76491.1| predicted protein [Populus trichocarpa]

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/48 (68%), Positives = 42/48 (87%)

Query: 38 SDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          S +SS TP++VLST +A+CGSF +G +VGYSSAAESG+R DLGLSV+E
Sbjct: 28 SHDSSITPILVLSTFIAVCGSFCYGFAVGYSSAAESGIRKDLGLSVSE 75

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542516|ref|XP_002512321.1| sugar transporter, putative [Ricinus communis] gi|223548282|gb|EEF49773.1| sugar transporter, putative [Ricinus communis]

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 11/83 (13%)

Query: 1  MENPESLEEGLIAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFA 60
          + N   +EE L+ KS+LA P            SG    + SS TP VV ST++AICGSF 
Sbjct: 3  IANMREVEEELLPKSTLAIPI-----------SGSLPQNESSVTPAVVFSTIIAICGSFG 51

Query: 61 HGCSVGYSSAAESGMRADLGLSV 83
           GC+ GYSS AESG+R DLG+SV
Sbjct: 52 SGCATGYSSPAESGIREDLGMSV 74

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298205032|emb|CBI34339.3| unnamed protein product [Vitis vinifera] gi|310877848|gb|ADP37155.1| putative ERD6-like transporter [Vitis vinifera]

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 57/86 (66%), Gaps = 4/86 (4%)

Query: 3  NPESLEEGLIAKSSLAQPNP---IKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSF 59
          + ES+EEG   +S + +  P       ++ G   G PES   SATPVVVLSTLVAICGS+
Sbjct: 2  DIESVEEGSTTRSLIIKEKPKAHGNGDDDGGRGVGGPES-GGSATPVVVLSTLVAICGSY 60

Query: 60 AHGCSVGYSSAAESGMRADLGLSVTE 85
            G +VGYSS AESG+  DLGLSVTE
Sbjct: 61 EFGAAVGYSSPAESGIMDDLGLSVTE 86

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487982|ref|XP_002263320.2| PREDICTED: sugar transporter ERD6-like 5-like [Vitis vinifera]

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 57/86 (66%), Gaps = 4/86 (4%)

Query: 3  NPESLEEGLIAKSSLAQPNP---IKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSF 59
          + ES+EEG   +S + +  P       ++ G   G PES   SATPVVVLSTLVAICGS+
Sbjct: 2  DIESVEEGSTTRSLIIKEKPKAHGNGDDDGGRGVGGPES-GGSATPVVVLSTLVAICGSY 60

Query: 60 AHGCSVGYSSAAESGMRADLGLSVTE 85
            G +VGYSS AESG+  DLGLSVTE
Sbjct: 61 EFGAAVGYSSPAESGIMDDLGLSVTE 86

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131486|ref|XP_002328551.1| predicted protein [Populus trichocarpa] gi|222838266|gb|EEE76631.1| predicted protein [Populus trichocarpa]

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/46 (69%), Positives = 38/46 (82%)

Query: 38 SDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSV 83
          S+  S TPV+V ST VA+CGSF++GCSVGYSS AESG+  DLGLSV
Sbjct: 30 SNQHSITPVLVFSTFVALCGSFSYGCSVGYSSPAESGIMKDLGLSV 75

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125378|ref|XP_002319571.1| predicted protein [Populus trichocarpa] gi|222857947|gb|EEE95494.1| predicted protein [Populus trichocarpa]

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)

Query: 21 NPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLG 80
          +P+ +  ++   S  P  D+S  TP++V ST VA+CGSF++GCSVGYSS AESG+  DLG
Sbjct: 14 SPLLLAEKITGDSNKPTGDHS-ITPLLVFSTFVALCGSFSYGCSVGYSSPAESGIMEDLG 72

Query: 81 LSV 83
          LSV
Sbjct: 73 LSV 75

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542518|ref|XP_002512322.1| D-xylose-proton symporter, putative [Ricinus communis] gi|223548283|gb|EEF49774.1| D-xylose-proton symporter, putative [Ricinus communis]

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 36/47 (76%)

Query: 37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSV 83
          + D+S  TP VV +T+VAICGSF  GC+ G+SS A+SG+  DLG+SV
Sbjct: 25 DDDDSLVTPSVVFNTMVAICGSFGTGCATGFSSPAQSGIMEDLGMSV 71

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487977|ref|XP_002263553.2| PREDICTED: sugar transporter ERD6-like 5-like [Vitis vinifera]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 33/42 (78%)

Query: 44 TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          T V V ST VA+CG+F +GC+VGYSS AESG+  DLGLSV E
Sbjct: 35 TAVAVFSTAVAVCGAFTNGCAVGYSSPAESGIMDDLGLSVAE 76

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|310877858|gb|ADP37160.1| putative ERD6-like transporter [Vitis vinifera]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 33/42 (78%)

Query: 44 TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          T V V ST VA+CG+F +GC+VGYSS AESG+  DLGLSV E
Sbjct: 35 TAVAVFSTAVAVCGAFTNGCAVGYSSPAESGIMDDLGLSVAE 76

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298205028|emb|CBI34335.3| unnamed protein product [Vitis vinifera]

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 33/42 (78%)

Query: 44 TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
          T V V ST VA+CG+F +GC+VGYSS AESG+  DLGLSV E
Sbjct: 35 TAVAVFSTAVAVCGAFTNGCAVGYSSPAESGIMDDLGLSVAE 76

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	85
TAIR|locus:2036084	496	ERD6 "EARLY RESPONSE TO DEHYDR	1.0	0.171	0.395	2.1e-08
TAIR|locus:505006329	467	AT3G05165 [Arabidopsis thalian	0.576	0.104	0.408	2.1e-07
TAIR|locus:2144975	482	AT5G18840 "AT5G18840" [Arabido	0.894	0.157	0.382	3.9e-07
TAIR|locus:2146365	478	SFP2 [Arabidopsis thaliana (ta	0.576	0.102	0.470	6.4e-07
TAIR|locus:2146350	474	SFP1 [Arabidopsis thaliana (ta	0.576	0.103	0.470	8e-07
TAIR|locus:2096234	458	AT3G05160 [Arabidopsis thalian	0.576	0.106	0.428	2.6e-06
TAIR|locus:2036009	462	AT1G08900 [Arabidopsis thalian	0.576	0.106	0.469	5.6e-06
TAIR|locus:2066400	463	AT2G48020 [Arabidopsis thalian	0.470	0.086	0.55	5.7e-06
TAIR|locus:2036039	464	AT1G08890 [Arabidopsis thalian	0.541	0.099	0.5	9.3e-06
TAIR|locus:2199539	470	AT1G54730 [Arabidopsis thalian	0.576	0.104	0.450	4.2e-05

TAIR|locus:2036084 ERD6 "EARLY RESPONSE TO DEHYDRATION 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 38/96 (39%), Positives = 56/96 (58%)

Query:     1 MENPESLEEGLIAKS-SLAQ---PNPIK-ITNEVGERSGL----PESDNSSA--TPVVVL 49
             ME  +S+E+GL+ KS S+ +   PN    + + +  +S      P++D+     T  V L
Sbjct:     1 MERQKSMEKGLLRKSLSIRERKFPNEDAFLESGLSRKSPREVKKPQNDDGECRVTASVFL 60

Query:    50 STLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             ST VA+ GSF  GC VG+SS A++G+  DL LSV E
Sbjct:    61 STFVAVSGSFCTGCGVGFSSGAQAGITKDLSLSVAE 96

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0010200 "response to chitin" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

TAIR|locus:505006329 AT3G05165 [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 20/49 (40%), Positives = 34/49 (69%)

Query:    37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             + D+   T  V+LST VA+C +F++GC+ GY+S AE+ +  +L LS+ +
Sbjct:    20 DRDDRRITACVILSTFVAVCSAFSYGCAAGYTSGAETAIMKELDLSMAQ 68

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2144975 AT5G18840 "AT5G18840" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 31/81 (38%), Positives = 46/81 (56%)

Query:     5 ESLEEGLIAKSSLAQPNPIKITNEVGERSGLPESDNSSATPVVVLSTLVAICGSFAHGCS 64
             + +E G I         P  +T+E  E+    ES+N+ +  +V+ ST VA+CGSF  G  
Sbjct:     7 KDVERGEIVNKVEDLGKPF-LTHEDDEK----ESENNESYLMVLFSTFVAVCGSFEFGSC 61

Query:    65 VGYSSAAESGMRADLGLSVTE 85
             VGYS+  +S +R DL LS+ E
Sbjct:    62 VGYSAPTQSSIRQDLNLSLAE 82

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2146365 SFP2 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 6.4e-07, P = 6.4e-07
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query:    37 ESDNSSA--TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             ++D+S    T  V+LST +A+CGSF+ G S+GY+S AE G+  DL LS+ +
Sbjct:    23 QNDDSECRITACVILSTFIAVCGSFSFGVSLGYTSGAEIGIMKDLDLSIAQ 73

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2146350 SFP1 [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query:    37 ESDNSSA--TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             ++D+S    T  V+LST VA+CGSF+ G + GY+S AE+G+  DL LS+ +
Sbjct:    19 KNDDSECRITACVILSTFVAVCGSFSFGVATGYTSGAETGVMKDLDLSIAQ 69

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009624 "response to nematode" evidence=IEP

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2096234 AT3G05160 [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 21/49 (42%), Positives = 34/49 (69%)

Query:    37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             + D+   T  V+LST VA+C SF++GC+ GY+S AE+ +  +L LS+ +
Sbjct:    11 DRDDRRITACVILSTFVAVCSSFSYGCANGYTSGAETAIMKELDLSMAQ 59

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2036009 AT1G08900 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 5.6e-06, P = 5.6e-06
 Identities = 23/49 (46%), Positives = 34/49 (69%)

Query:    37 ESDNSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             E + SS T  ++LST V + GSF +GC++ YSS A+S +  +LGLSV +
Sbjct:    15 EEEASSFTSGLLLSTSVVVAGSFCYGCAMSYSSPAQSKIMEELGLSVAD 63

GO:0005215 "transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2066400 AT2G48020 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 22/40 (55%), Positives = 29/40 (72%)

Query:    46 VVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             +V LST VA+CGSFA G   GYSS A++ +R DL L++ E
Sbjct:    27 MVYLSTFVAVCGSFAFGSCAGYSSPAQAAIRNDLSLTIAE 66

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2036039 AT1G08890 [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 9.3e-06, P = 9.3e-06
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query:    40 NSSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             +SS T  ++LST VA+ GSF +GC++ YSS A+S +  +LGLSV +
Sbjct:    20 SSSITCGLLLSTSVAVTGSFVYGCAMSYSSPAQSKIMEELGLSVAD 65

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2199539 AT1G54730 [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query:    37 ESDNSSAT--PVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLSVTE 85
             E+ +SSAT    ++L+T VA+ GSF  G ++GYSS  +S +  +L LSV E
Sbjct:    20 ENQDSSATITTTLLLTTFVAVSGSFVFGSAIGYSSPVQSDLTKELNLSVAE 70

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0022891 "substrate-specific transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	85
KOG0254	513	consensus Predicted transporter (major facilitator	92.82
KOG0569	485	consensus Permease of the major facilitator superf	92.67
PRK10077	479	xylE D-xylose transporter XylE; Provisional	91.8
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	81.73

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=92.82  E-value=0.18  Score=39.78  Aligned_cols=36  Identities=31%  Similarity=0.367  Sum_probs=32.4

Q ss_pred             chHHHHHHHHHHHhhhhcccc--ccccchhhHHHHhhc
Q 041389           44 TPVVVLSTLVAICGSFAHGCS--VGYSSAAESGMRADL   79 (85)
Q Consensus        44 t~~~~l~a~iAslgs~lfGyd--lGviSga~~~i~~dl   79 (85)
                      +..+.++++.+++++++|||+  .|+.+++..+++++.
T Consensus        40 ~~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~   77 (513)
T KOG0254|consen   40 SPFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFA   77 (513)
T ss_pred             ceehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcc
Confidence            678899999999999999998  899999999988754

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=92.67  E-value=0.1  Score=42.54  Aligned_cols=36  Identities=28%  Similarity=0.467  Sum_probs=31.1

Q ss_pred             CCcchHHHHHHHHHHHhhhhccccccccchhhHHHHh
Q 041389           41 SSATPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRA   77 (85)
Q Consensus        41 ~~~t~~~~l~a~iAslgs~lfGydlGviSga~~~i~~   77 (85)
                      .. +...++.++++++|+|.|||++++++++.+.+++
T Consensus         4 ~~-t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~   39 (485)
T KOG0569|consen    4 KL-TRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKS   39 (485)
T ss_pred             Cc-cHHHHHHHHHHHHhchhhhhhheecCchHHHHHH
Confidence            44 7788888899999999999999999999877653

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=91.80  E-value=0.18  Score=38.18  Aligned_cols=35  Identities=20%  Similarity=0.245  Sum_probs=30.9

Q ss_pred             hHHHHHHHHHHHhhhhccccccccchhhHHHHhhc
Q 041389           45 PVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADL   79 (85)
Q Consensus        45 ~~~~l~a~iAslgs~lfGydlGviSga~~~i~~dl   79 (85)
                      ++.+.++++++++.+.+|||.++++++.+.+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   42 (479)
T PRK10077          8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVF   42 (479)
T ss_pred             hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHh
Confidence            46677888889999999999999999999888877

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=81.73  E-value=1.6  Score=31.98  Aligned_cols=39  Identities=21%  Similarity=0.202  Sum_probs=32.8

Q ss_pred             chHHHHHHHHHHHhhhhccccccccchhhHHHHhhcCCC
Q 041389           44 TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLGLS   82 (85)
Q Consensus        44 t~~~~l~a~iAslgs~lfGydlGviSga~~~i~~dl~LS   82 (85)
                      .+..+..++++.++.++++++.++++++.+.+..+++++
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (481)
T TIGR00879        23 YWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFT   61 (481)
T ss_pred             cHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcC
Confidence            556667778888899999999999999999888877765

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	85
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	97.45

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=97.45  E-value=5.3e-05  Score=55.48  Aligned_cols=37  Identities=19%  Similarity=0.215  Sum_probs=33.7

Q ss_pred             chHHHHHHHHHHHhhhhccccccccchhhHHHHhhcC
Q 041389           44 TPVVVLSTLVAICGSFAHGCSVGYSSAAESGMRADLG   80 (85)
Q Consensus        44 t~~~~l~a~iAslgs~lfGydlGviSga~~~i~~dl~   80 (85)
                      ++|+++++++|++|+|+||||++++|++++.++.++.
T Consensus         7 ~~y~~~i~~~a~lg~~~~Gyd~~~i~~~~~~~~~~~~   43 (491)
T 4gc0_A            7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFV   43 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHGGGGTHHHHHHHHT
T ss_pred             hHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5788999999999999999999999999999887764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00