Citrus Sinensis ID: 041400

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-----
Protein Sequence
MARLSWSSIALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccHHHHHHHHHHccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHccccccccccccccHccHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MARLSWSSIALVLFLSVVFAVEVanaggegslkpeqcasacnyrcsatshrnpciefcnmcckkclcvpsgtyghkeecpcynnwktkegtpkcp
Flexible Loop (DISEMBL)
MARLSWSSIALVLFLSVVFAVEVANAggegslkpeqCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGtyghkeecpcynnwktkegtpkcp
Low Complexity Region (SEG)
MARLSWssialvlflsvvfavevaNAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP
Disordered region (IsUnstruct)
****SWSSIALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWK*********
Disordered Region (DISOPRED)
***LSWSSIALVLFLSVVF*****************CASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKE******
Disordered Region (DISEMBL)
MARLSWSSIALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKT********
Disordered Region (DISPRO)
MARLSWSSIALVLFLSVVFAVEVA*****GSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKT******C*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARLSWSSIALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	95	2.2.26 [Sep-21-2011]
Q6GKX7	106	Gibberellin-regulated pro	yes	no	0.915	0.820	0.617	3e-24
P47926	96	Protein RSI-1 OS=Solanum	N/A	no	1.0	0.989	0.5	1e-22
P27057	112	Protein GAST1 OS=Solanum	N/A	no	0.705	0.598	0.656	2e-21
Q6NMQ7	101	Gibberellin-regulated pro	no	no	1.0	0.940	0.495	8e-21
P46690	106	Gibberellin-regulated pro	no	no	0.915	0.820	0.516	2e-20
Q84J95	97	Gibberellin-regulated pro	no	no	0.821	0.804	0.662	1e-18
O80641	87	Gibberellin-regulated pro	no	no	0.915	1.0	0.402	3e-15
Q8LFM2	89	Gibberellin-regulated pro	no	no	0.831	0.887	0.431	2e-14
P86888	63	Peamaclein OS=Prunus pers	N/A	no	0.621	0.936	0.542	3e-13
A8MR46	103	Gibberellin-regulated pro	no	no	1.0	0.922	0.484	2e-12

>sp|Q6GKX7|GASAC_ARATH Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12 PE=3 SV=1

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/102 (61%), Positives = 71/102 (69%), Gaps = 15/102 (14%)

Query: 9   IALVLFLSVVFAVEVANA---------------GGEGSLKPEQCASACNYRCSATSHRNP 53
           I + +  S++FA + +N                GGEGSLKPE+C  AC YRCSATSHR P
Sbjct: 5   IVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRKP 64

Query: 54  CIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
           C+ FCN CC KCLCVPSGTYGHKEECPCYNNW TKEG PKCP
Sbjct: 65  CLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.
Arabidopsis thaliana (taxid: 3702)

>sp|P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 1/96 (1%)

Query: 1  MARLSWSSIALVLFLSVVFAVEVANA-GGEGSLKPEQCASACNYRCSATSHRNPCIEFCN 59
          MA+  +++  L+L    +  +  +N   G   L+P  C   C YRCSATSH+ PC+ FC 
Sbjct: 1  MAKSGYNASFLLLISMFLILLTFSNVVEGYNKLRPTDCKPRCTYRCSATSHKKPCMFFCQ 60

Query: 60 MCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
           CC  CLCVP G YG+K+ CPCYNNWKT+EG PKCP
Sbjct: 61 KCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96

Solanum lycopersicum (taxid: 4081)

>sp|P27057|GAST1_SOLLC Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 51/67 (76%)

Query: 29  EGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTK 88
           EG L P+ C   C YRCS TS++ PC+ FC  CC KCLCVP+GTYG+K+ CPCYNNWKTK
Sbjct: 46  EGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTK 105

Query: 89  EGTPKCP 95
            G PKCP
Sbjct: 106 RGGPKCP 112

Solanum lycopersicum (taxid: 4081)

>sp|Q6NMQ7|GASA6_ARATH Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 60/101 (59%), Gaps = 6/101 (5%)

Query: 1   MARLSWSSIALVLFLSVVFAVEVANAG------GEGSLKPEQCASACNYRCSATSHRNPC 54
           MA+L  S + L +  + V       A       G GSLK  QC   C  RCS T +  PC
Sbjct: 1   MAKLITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPC 60

Query: 55  IEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
           + FC  CC KCLCVP GTYG+K+ CPCYNNWKT++G PKCP
Sbjct: 61  MFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|P46690|GASA4_ARATH Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 6/93 (6%)

Query: 9   IALVLFLSVVFAVEVANAG------GEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCC 62
           I L +  ++V A   +N        G GSLK  QC S C+ RC  T +   CI FCN CC
Sbjct: 14  IVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCC 73

Query: 63  KKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
           +KCLCVP G YG+K+ C CYNNWKT+EG PKCP
Sbjct: 74  RKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

Gibberellin-regulated protein involved in the regulation of floral meristem and floral organ identity, and promotion of seed size and weight. May play a role in the promotion of gibberellin responses such as regulation of flowering under short-day conditions, seed germination and inhibition of gibberellin oxidase. Possesses redox activity in E.coli and may function in redox regulation in planta.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84J95|GASA5_ARATH Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 2/80 (2%)

Query: 16 SVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGH 75
          SV   V+ A  GG+  LKP+QC S C++RCSATSH+ PC+ FC  CCKKCLCVP GT+G+
Sbjct: 20 SVSNLVQAARGGGK--LKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGN 77

Query: 76 KEECPCYNNWKTKEGTPKCP 95
          K+ CPCYNNWKTKEG PKCP
Sbjct: 78 KQTCPCYNNWKTKEGRPKCP 97

Gibberellin-regulated protein that acts as a negative regulator of gibberellin-induced flowering and stem growth. May inhibit flowering and inflorescence growth via a pathway involving GAI and by enhancing FLC expression and repressing FT and LFY. Acts as a negative regulator in thermotolerance by resogulating both salicylic acid (SA) signaling and heat shock-protein accumulation.

Arabidopsis thaliana (taxid: 3702)

>sp|O80641|GASA8_ARATH Gibberellin-regulated protein 8 OS=Arabidopsis thaliana GN=At2g39540 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 52/87 (59%)

Query: 9  IALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCV 68
          + LV+    + ++ + ++    S     C   CN RCS       C+++CN+CC+KC CV
Sbjct: 1  MKLVVVQFFIISLLLTSSFSVLSSADSSCGGKCNVRCSKAGQHEECLKYCNICCQKCNCV 60

Query: 69 PSGTYGHKEECPCYNNWKTKEGTPKCP 95
          PSGT+GHK+ECPCY + K  +G  KCP
Sbjct: 61 PSGTFGHKDECPCYRDMKNSKGGSKCP 87

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LFM2|GASAA_ARATH Gibberellin-regulated protein 10 OS=Arabidopsis thaliana GN=GASA10 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 9/88 (10%)

Query: 9  IALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKC-LC 67
          I  +L  S +F +  A++          C   CN RCS    ++ C+++CN+CC+KC  C
Sbjct: 10 IISLLITSSLFILSTADS--------SPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYC 61

Query: 68 VPSGTYGHKEECPCYNNWKTKEGTPKCP 95
          VPSGTYG+K+ECPCY + K  +GT KCP
Sbjct: 62 VPSGTYGNKDECPCYRDMKNSKGTSKCP 89

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|P86888|PMLN_PRUPE Peamaclein OS=Prunus persica PE=1 SV=1

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 43/59 (72%)

Query: 37 CASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
          C S C  RCS   ++  C+++C +CC+KC CVPSGTYG+K+ECPCY + K  +G PKCP
Sbjct: 5  CDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63

Prunus persica (taxid: 3760)

>sp|A8MR46|GASAD_ARATH Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13 PE=3 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 4/99 (4%)

Query: 1   MARLSWSSIALVLFLS--VVFAVEV-ANAGGEGSLKPE-QCASACNYRCSATSHRNPCIE 56
           ++ + +S + L L LS  + F + V A    + ++ P  +C   C  RCS T ++ PC+ 
Sbjct: 5   LSIIVFSIVVLHLLLSAHMHFLINVCAECETKSAIPPLLECGPRCGDRCSNTQYKKPCLF 64

Query: 57  FCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
           FCN CC KCLCVP GTYG+K+ CPCYNNWKTK G PKCP
Sbjct: 65  FCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	95
388498928	92	unknown [Lotus japonicus]	0.905	0.934	0.651	4e-29
255554100	79	Gibberellin-regulated protein 4 precurso	0.831	1.0	0.734	8e-29
356546540	93	PREDICTED: protein GAST1-like [Glycine m	0.905	0.924	0.678	1e-27
297835464	149	hypothetical protein ARALYDRAFT_898961 [	0.894	0.570	0.647	2e-27
357486295	92	GAST1 [Medicago truncatula] gi|355514770	0.905	0.934	0.604	8e-27
359495591	158	PREDICTED: uncharacterized protein LOC10	0.768	0.462	0.753	1e-26
297826503	106	gibberellin-regulated family protein [Ar	0.915	0.820	0.558	4e-26
357486333	92	Gibberellin induced protein [Medicago tr	0.905	0.934	0.616	5e-26
357486337	92	Gibberellin-regulated protein [Medicago	0.905	0.934	0.627	1e-25
357486309	92	GAST1 [Medicago truncatula] gi|355514777	0.905	0.934	0.604	1e-25

>gi|388498928|gb|AFK37530.1| unknown [Lotus japonicus]

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 72/86 (83%)

Query: 10 ALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVP 69
            +L L++ +A+++ +AGGEGSL+PEQC  AC+YRCSAT +R  C+ +CN+CC K LCVP
Sbjct: 7  GFLLMLAMTYAIQLVSAGGEGSLRPEQCPGACDYRCSATQYRKACLTYCNLCCNKRLCVP 66

Query: 70 SGTYGHKEECPCYNNWKTKEGTPKCP 95
          SGTYGHKEECPCYN+WKTK+G PKCP
Sbjct: 67 SGTYGHKEECPCYNDWKTKKGGPKCP 92

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554100|ref|XP_002518090.1| Gibberellin-regulated protein 4 precursor, putative [Ricinus communis] gi|223542686|gb|EEF44223.1| Gibberellin-regulated protein 4 precursor, putative [Ricinus communis]

 Score =  130 bits (328), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 68/79 (86%)

Query: 17 VVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHK 76
          + F +++++AGGEGSL  EQC  AC++RCSAT HR  CI+ CN CC+KCLCVPSGTYGHK
Sbjct: 1  MAFVIDISHAGGEGSLTKEQCPKACDFRCSATHHRGNCIDLCNKCCEKCLCVPSGTYGHK 60

Query: 77 EECPCYNNWKTKEGTPKCP 95
          EECPCYNNWKTKEGTPKCP
Sbjct: 61 EECPCYNNWKTKEGTPKCP 79

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546540|ref|XP_003541683.1| PREDICTED: protein GAST1-like [Glycine max] gi|356546550|ref|XP_003541688.1| PREDICTED: protein GAST1-like [Glycine max]

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 67/87 (77%), Gaps = 1/87 (1%)

Query: 10 ALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCS-ATSHRNPCIEFCNMCCKKCLCV 68
          AL+L   + F  +VA  GGEGSL P++C  AC+YRCS A   +  C+ FCNMCC KCLCV
Sbjct: 7  ALLLIFVMAFVTQVAYGGGEGSLTPQECPGACDYRCSKADRTKKACLNFCNMCCAKCLCV 66

Query: 69 PSGTYGHKEECPCYNNWKTKEGTPKCP 95
          PSGTYGHKEECPCYNNWKTK GTPKCP
Sbjct: 67 PSGTYGHKEECPCYNNWKTKRGTPKCP 93

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835464|ref|XP_002885614.1| hypothetical protein ARALYDRAFT_898961 [Arabidopsis lyrata subsp. lyrata] gi|297331454|gb|EFH61873.1| hypothetical protein ARALYDRAFT_898961 [Arabidopsis lyrata subsp. lyrata]

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 55/85 (64%), Positives = 67/85 (78%)

Query: 9  IALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCV 68
          I + +  S +FA + +N GGEGSL   QC +ACN RCSATSH+ PC+ +CN CC KCLCV
Sbjct: 5  IVIFIVFSFLFATQFSNEGGEGSLTIGQCPAACNVRCSATSHKKPCLFYCNYCCNKCLCV 64

Query: 69 PSGTYGHKEECPCYNNWKTKEGTPK 93
          PSGTYGHKEECPCYNNWKT+EG+ +
Sbjct: 65 PSGTYGHKEECPCYNNWKTQEGSQR 89

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486295|ref|XP_003613435.1| GAST1 [Medicago truncatula] gi|355514770|gb|AES96393.1| GAST1 [Medicago truncatula]

 Score =  124 bits (311), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 66/86 (76%)

Query: 10 ALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVP 69
          A +  L + F ++   AGGEGSL+P+ CA  C+YRCS TSHR  C+ +CN+CC KCLCVP
Sbjct: 7  AFLFMLVITFVIQETYAGGEGSLRPQDCAPKCDYRCSKTSHRKACLTYCNLCCAKCLCVP 66

Query: 70 SGTYGHKEECPCYNNWKTKEGTPKCP 95
          SGTYG+K+ECPCY+NW+ K G PKCP
Sbjct: 67 SGTYGNKQECPCYDNWRNKNGGPKCP 92

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495591|ref|XP_003635032.1| PREDICTED: uncharacterized protein LOC100854588 [Vitis vinifera]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 61/73 (83%)

Query: 23  VANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCY 82
           +  AGGEGSL   +C  ACNYRCS T + N C+EFCN+CC+KCLCVPSGTYGHKEECPCY
Sbjct: 86  IKVAGGEGSLTKAECPKACNYRCSDTQYLNACLEFCNLCCQKCLCVPSGTYGHKEECPCY 145

Query: 83  NNWKTKEGTPKCP 95
           NNWKTKEG PKCP
Sbjct: 146 NNWKTKEGGPKCP 158

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826503|ref|XP_002881134.1| gibberellin-regulated family protein [Arabidopsis lyrata subsp. lyrata] gi|297326973|gb|EFH57393.1| gibberellin-regulated family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 15/102 (14%)

Query: 9   IALVLFLSVVFAVEVANA---------------GGEGSLKPEQCASACNYRCSATSHRNP 53
           I   +  S++F+ + +N                GGEGSL+PE+C  AC  RCSATSH+ P
Sbjct: 5   IVFFVVSSLLFSTQFSNGEELESSADAPAIHKTGGEGSLRPEECPKACEIRCSATSHKKP 64

Query: 54  CIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
           C+ +CN CC KCLCVPSGTYGHKEECPCY+NW+TKEG PKCP
Sbjct: 65  CLFYCNKCCSKCLCVPSGTYGHKEECPCYDNWRTKEGGPKCP 106

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486333|ref|XP_003613454.1| Gibberellin induced protein [Medicago truncatula] gi|355514789|gb|AES96412.1| Gibberellin induced protein [Medicago truncatula]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 66/86 (76%)

Query: 10 ALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVP 69
          A +  L   F ++   AGGEGSLKP +CA  C+YRCS T+++  C+ +CN+CC KCLCVP
Sbjct: 7  AFLFMLVTSFVIQDVYAGGEGSLKPAECAPKCDYRCSKTAYKKACLTYCNLCCAKCLCVP 66

Query: 70 SGTYGHKEECPCYNNWKTKEGTPKCP 95
          SGTYG+KEECPCYNNWK K+G PKCP
Sbjct: 67 SGTYGNKEECPCYNNWKNKKGGPKCP 92

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486337|ref|XP_003613456.1| Gibberellin-regulated protein [Medicago truncatula] gi|355514791|gb|AES96414.1| Gibberellin-regulated protein [Medicago truncatula]

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/86 (62%), Positives = 65/86 (75%)

Query: 10 ALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVP 69
          A +  L   F ++   AGGEGSLKPE+C++AC+ RCSAT ++  C+ +CN CC KCLCVP
Sbjct: 7  AFLFMLVTSFVIQDVYAGGEGSLKPEECSAACDVRCSATMYKKACLTYCNYCCAKCLCVP 66

Query: 70 SGTYGHKEECPCYNNWKTKEGTPKCP 95
          SGTYGHKEECPCY N KT EG PKCP
Sbjct: 67 SGTYGHKEECPCYANLKTHEGGPKCP 92

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486309|ref|XP_003613442.1| GAST1 [Medicago truncatula] gi|355514777|gb|AES96400.1| GAST1 [Medicago truncatula]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 64/86 (74%)

Query: 10 ALVLFLSVVFAVEVANAGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVP 69
          A +  L + F ++   AGGEGSL+P+ CA AC+ RCSAT ++  C+ +CN CC KCLCVP
Sbjct: 7  AFLFMLVITFVIQETYAGGEGSLRPQDCAGACDVRCSATMYKKACLTYCNYCCAKCLCVP 66

Query: 70 SGTYGHKEECPCYNNWKTKEGTPKCP 95
          SGTYGHKEECPCY N +TK G PKCP
Sbjct: 67 SGTYGHKEECPCYANMRTKRGGPKCP 92

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	95
TAIR|locus:2052876	106	AT2G30810 [Arabidopsis thalian	0.726	0.650	0.840	1.5e-33
TAIR|locus:505006327	97	GASA5 "GAST1 protein homolog 5	0.736	0.721	0.714	1.2e-28
TAIR|locus:2019195	101	GASA6 "AT1G74670" [Arabidopsis	0.715	0.673	0.632	4.2e-24
TAIR|locus:2150896	106	GASA4 "AT5G15230" [Arabidopsis	0.715	0.641	0.632	1.4e-23
TAIR|locus:4010713737	103	AT3G10185 [Arabidopsis thalian	0.631	0.582	0.65	1.3e-22
TAIR|locus:2039732	87	AT2G39540 [Arabidopsis thalian	0.621	0.678	0.542	1.1e-18
TAIR|locus:505006706	89	AT5G59845 "AT5G59845" [Arabido	0.621	0.662	0.55	1.7e-18
TAIR|locus:2060485	108	AT2G14900 "AT2G14900" [Arabido	0.705	0.620	0.447	2.9e-16
TAIR|locus:4010713424	90	AT1G10588 [Arabidopsis thalian	0.621	0.655	0.533	2.9e-16
TAIR|locus:2136892	99	GASA3 "AT4G09600" [Arabidopsis	0.705	0.676	0.470	4.9e-14

TAIR|locus:2052876 AT2G30810 [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 58/69 (84%), Positives = 60/69 (86%)

Query:    27 GGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWK 86
             GGEGSLKPE+C  AC YRCSATSHR PC+ FCN CC KCLCVPSGTYGHKEECPCYNNW 
Sbjct:    38 GGEGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWT 97

Query:    87 TKEGTPKCP 95
             TKEG PKCP
Sbjct:    98 TKEGGPKCP 106

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

TAIR|locus:505006327 GASA5 "GAST1 protein homolog 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 50/70 (71%), Positives = 58/70 (82%)

Query:    26 AGGEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNW 85
             A G G LKP+QC S C++RCSATSH+ PC+ FC  CCKKCLCVP GT+G+K+ CPCYNNW
Sbjct:    28 ARGGGKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNW 87

Query:    86 KTKEGTPKCP 95
             KTKEG PKCP
Sbjct:    88 KTKEGRPKCP 97

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

GO:0009506 "plasmodesma" evidence=IDA

GO:0009408 "response to heat" evidence=IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IMP

GO:0010286 "heat acclimation" evidence=IMP

TAIR|locus:2019195 GASA6 "AT1G74670" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 43/68 (63%), Positives = 49/68 (72%)

Query:    28 GEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKT 87
             G GSLK  QC   C  RCS T +  PC+ FC  CC KCLCVP GTYG+K+ CPCYNNWKT
Sbjct:    34 GPGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKT 93

Query:    88 KEGTPKCP 95
             ++G PKCP
Sbjct:    94 QQGGPKCP 101

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0009750 "response to fructose stimulus" evidence=IEP

GO:0080167 "response to karrikin" evidence=IEP

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2150896 GASA4 "AT5G15230" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 43/68 (63%), Positives = 49/68 (72%)

Query:    28 GEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKT 87
             G GSLK  QC S C+ RC  T +   CI FCN CC+KCLCVP G YG+K+ C CYNNWKT
Sbjct:    39 GPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKT 98

Query:    88 KEGTPKCP 95
             +EG PKCP
Sbjct:    99 QEGGPKCP 106

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=TAS

GO:0045454 "cell redox homeostasis" evidence=IMP

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0009739 "response to gibberellin stimulus" evidence=IMP

TAIR|locus:4010713737 AT3G10185 [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 39/60 (65%), Positives = 45/60 (75%)

Query:    36 QCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
             +C   C  RCS T ++ PC+ FCN CC KCLCVP GTYG+K+ CPCYNNWKTK G PKCP
Sbjct:    44 ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2039732 AT2G39540 [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 32/59 (54%), Positives = 41/59 (69%)

Query:    37 CASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
             C   CN RCS       C+++CN+CC+KC CVPSGT+GHK+ECPCY + K  +G  KCP
Sbjct:    29 CGGKCNVRCSKAGQHEECLKYCNICCQKCNCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

TAIR|locus:505006706 AT5G59845 "AT5G59845" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 33/60 (55%), Positives = 44/60 (73%)

Query:    37 CASACNYRCSATSHRNPCIEFCNMCCKKC-LCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
             C   CN RCS    ++ C+++CN+CC+KC  CVPSGTYG+K+ECPCY + K  +GT KCP
Sbjct:    30 CGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDECPCYRDMKNSKGTSKCP 89

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

TAIR|locus:2060485 AT2G14900 "AT2G14900" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 30/67 (44%), Positives = 42/67 (62%)

Query:    29 EGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTK 88
             +G    + C   C  RC     ++ C+++C +CCK C CVPSGTYG+K EC CY +  + 
Sbjct:    42 DGPALEKWCGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSS 101

Query:    89 EGTPKCP 95
             +GTPKCP
Sbjct:   102 KGTPKCP 108

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS

TAIR|locus:4010713424 AT1G10588 [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 32/60 (53%), Positives = 41/60 (68%)

Query:    37 CASACNYRCS-ATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
             C   C+ RCS A      C+E C++CC+KC CVPSGTYG+K+ECPCY + K  +G  KCP
Sbjct:    31 CGGKCSVRCSKADRTHEECLEDCDICCQKCNCVPSGTYGNKDECPCYRDMKNSKGGSKCP 90

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2136892 GASA3 "AT4G09600" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 32/68 (47%), Positives = 40/68 (58%)

Query:    28 GEGSLKPEQCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKT 87
             GEG +K + C   C  RCS +S  N C+  CN CC +C CVP GT G+   CPCY +  T
Sbjct:    33 GEGVVKID-CGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITT 91

Query:    88 KEGTPKCP 95
             + G  KCP
Sbjct:    92 RGGRLKCP 99

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009739 "response to gibberellin stimulus" evidence=ISS;TAS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6GKX7	GASAC_ARATH	No assigned EC number	0.6176	0.9157	0.8207	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	95
pfam02704	60	pfam02704, GASA, Gibberellin regulated protein	1e-25

>gnl|CDD|190394 pfam02704, GASA, Gibberellin regulated protein

 Score = 89.6 bits (223), Expect = 1e-25
 Identities = 38/60 (63%), Positives = 42/60 (70%)

Query: 36 QCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 95
           C   C  RCS TS + PC+  C  CC KCLCVP GTYG+K+ECPCYNNWKT  G PKCP
Sbjct: 1  DCGGKCAVRCSKTSRKKPCLRACGKCCAKCLCVPPGTYGNKDECPCYNNWKTHGGRPKCP 60

This is the GASA gibberellin regulated cysteine rich protein family. The expression of these proteins is up-regulated by the plant hormone gibberellin, most of these proteins have some role in plant development. There are 12 cysteine residues conserved within the alignment giving the potential for these proteins to posses 6 disulphide bonds. Length = 60

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	95
PF02704	60	GASA: Gibberellin regulated protein; InterPro: IPR	100.0
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	94.98
PF10731	65	Anophelin: Thrombin inhibitor from mosquito; Inter	84.15
PF07127	54	Nodulin_late: Late nodulin protein; InterPro: IPR0	83.34

>PF02704 GASA: Gibberellin regulated protein; InterPro: IPR003854 This is the GASA gibberellin regulated cysteine rich protein family

Probab=100.00  E-value=9.2e-38  Score=201.18  Aligned_cols=60  Identities=57%  Similarity=1.384  Sum_probs=59.4

Q ss_pred             CchHHhhHHhhcCCCCChHHHHHHhhcCcccccCCCCCCCCCCCCcccccccCCCCCCCC
Q 041400           36 QCASACNYRCSATSHRNPCIEFCNMCCKKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP   95 (95)
Q Consensus        36 ~C~~~C~~RCs~~~~~~~C~~~C~~CC~~C~CVP~Gtygnk~~CpCY~~~~t~~g~pKCP   95 (95)
                      ||+++|++|||+++++++||++||+||++|+|||||||||+|+||||+||+||+|+||||
T Consensus         1 ~C~~~C~~RCs~~~~~~~C~~~C~~CC~~C~CVP~GT~gn~~~CpCY~~m~t~~g~pKCP   60 (60)
T PF02704_consen    1 DCGGACSVRCSKASRKKRCMRACGTCCAKCKCVPPGTYGNKEECPCYRDMKTHGGKPKCP   60 (60)
T ss_pred             CcchHHHHHHhccCCchHHHHHHHHHhccCcccCCCCCCCCccCCChhhhhccCCCCCCc
Confidence            799999999999999999999999999999999999999999999999999999999999

The expression of these proteins is up-regulated by the plant hormone gibberellin, most of these proteins have some role in plant development. There are 12 cysteine residues conserved within the alignment giving the potential for these proteins to posses 6 disulphide bonds.

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=94.98  E-value=0.033  Score=38.22  Aligned_cols=20  Identities=20%  Similarity=0.303  Sum_probs=9.2

Q ss_pred             CcchhHHHHHHHHHHHHHHH
Q 041400            1 MARLSWSSIALVLFLSVVFA   20 (95)
Q Consensus         1 MA~~~~~l~~~ll~l~~~f~   20 (95)
                      ||+++-||+++||+++||++
T Consensus         1 MaSK~~llL~l~LA~lLlis   20 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLIS   20 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHH
Confidence            88544334444443433333

Some of them may be involved in resistance to environmental stress [].

>PF10731 Anophelin: Thrombin inhibitor from mosquito; InterPro: IPR018932 Members of this family are all inhibitors of thrombin, the peptidase that is at the end of the blood coagulation cascade and which creates the clot by cleaving fibrinogen

Probab=84.15  E-value=1.5  Score=29.00  Aligned_cols=25  Identities=28%  Similarity=0.189  Sum_probs=14.4

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHhC
Q 041400            1 MARLSWSSIALVLFLSVVFAVEVANAG   27 (95)
Q Consensus         1 MA~~~~~l~~~ll~l~~~f~~~~~~~g   27 (95)
                      ||  .|++++.||-++++.+.|.+-.+
T Consensus         1 MA--~Kl~vialLC~aLva~vQ~APQY   25 (65)
T PF10731_consen    1 MA--SKLIVIALLCVALVAIVQSAPQY   25 (65)
T ss_pred             Cc--chhhHHHHHHHHHHHHHhcCccc
Confidence            77  56776666666555554544333

The interaction between thrombin and fibrinogen involves two different areas of contact - via the thrombin active site and via a second substrate-binding site known as an exosite. The inhibitor acts by blocking the exosite, rather than by interacting with the active site. The inhibitors are from mosquitoes that feed on human blood and which, by inhibiting thrombin, prevent the blood from clotting and keep it flowing.

>PF07127 Nodulin_late: Late nodulin protein; InterPro: IPR009810 This family consists of several plant specific late nodulin sequences which are homologous to the Pisum sativum (Garden pea) ENOD3 protein

Probab=83.34  E-value=1.1  Score=27.26  Aligned_cols=39  Identities=18%  Similarity=0.237  Sum_probs=18.4

Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchHH
Q 041400            1 MARLSWSSIALVLFLSVVFAVEVANAGGEGSLKPEQCASA   40 (95)
Q Consensus         1 MA~~~~~l~~~ll~l~~~f~~~~~~~gg~gsl~~~~C~~~   40 (95)
                      ||.+.+++-+++++++++++ .........=....||+..
T Consensus         1 Ma~ilKFvY~mIiflslflv-~~~~~~~~~C~~d~DCp~~   39 (54)
T PF07127_consen    1 MAKILKFVYAMIIFLSLFLV-VTNVDAIIPCKTDSDCPKD   39 (54)
T ss_pred             CccchhhHHHHHHHHHHHHh-hcccCCCcccCccccCCCC
Confidence            88887776554444333222 2111111111355688776

ENOD3 is expressed in the late stages of root nodule formation and contains two pairs of cysteine residues toward the proteins C terminus which may be involved in metal-binding [].; GO: 0046872 metal ion binding, 0009878 nodule morphogenesis

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00