Citrus Sinensis ID: 041574

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290--
Protein Sequence
MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASNFNEMDA
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccEEEHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEHccccccEEEHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccEEEcccccccEEEEEEccccEEEEEEEEEcccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MITGNDFYKVMCAMVPLYFAMLIAYGSVkwwriftpqqcsgiNRFVAVFAVPVLSFhfiaqnnpyqmdtKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSvatlpntlVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQtqfpgpaaasiakfeldndvisldgrdplktesetdgngrirvrirrstssapdsalsssicltprasnlsnaeifsintpaplhdyhynsnneivfwgsatsprlsnyassdayslqptprasnfnemda
Flexible Loop (DISEMBL)
MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDNDVISldgrdplktesetdgngrirvrirrstssapdsalsssiCLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYassdayslqptprasnfnemda
Low Complexity Region (SEG)
MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTlskvlvlvllsvWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDNDVISLDGRDPLKTESETDGNGrirvrirrstssapdsalsssICLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASNFNEMDA
Disordered region (IsUnstruct)
****NDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDNDVIS***********************************************LSNAEIFSINTPAPLHDYHYNSNNEIVFWGSA******************************
Disordered Region (DISOPRED)
**TGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAA**************************************************************************LSNAE*********************************************************
Disordered Region (DISEMBL)
MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRR***********SSICLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASNFNEMDA
Disordered Region (DISPRO)
MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRST**************TPRASNLSNAEIFSINT***************************************************
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASNFNEMDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	292	2.2.26 [Sep-21-2011]
Q9SQH6	570	Probable auxin efflux car	yes	no	0.993	0.508	0.733	1e-129
Q67UL3	592	Probable auxin efflux car	yes	no	0.965	0.476	0.581	1e-90
Q9C6B8	622	Auxin efflux carrier comp	no	no	0.972	0.456	0.571	2e-89
Q940Y5	619	Auxin efflux carrier comp	no	no	0.972	0.458	0.559	5e-89
Q5SMQ9	595	Auxin efflux carrier comp	no	no	0.965	0.473	0.571	7e-89
Q8RWZ6	616	Auxin efflux carrier comp	no	no	0.962	0.456	0.557	1e-88
Q9S7Z8	640	Auxin efflux carrier comp	no	no	0.952	0.434	0.560	5e-88
Q9LU77	647	Auxin efflux carrier comp	no	no	0.979	0.442	0.533	3e-84
Q651V6	630	Probable auxin efflux car	no	no	0.876	0.406	0.509	4e-81
Q5VP70	618	Probable auxin efflux car	no	no	0.972	0.459	0.538	7e-78

>sp|Q9SQH6|PIN6_ARATH Probable auxin efflux carrier component 6 OS=Arabidopsis thaliana GN=PIN6 PE=2 SV=2

 Score =  462 bits (1188), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/315 (73%), Positives = 260/315 (82%), Gaps = 25/315 (7%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MITGN+FY VMCAM PLYFAM +AYGSVKW +IFTP QCSGINRFV+VFAVPVLSFHFI+
Sbjct: 1   MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
           QNNPY+MDT FILADTLSK+ V VLLS+WA+FFK GGLDWLITLFS+ATLPNTLVMGIPL
Sbjct: 61  QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYG++TQ+LMVQLVVLQCIIWYTLLLFLFE RAA +LI+ +FPG AA SIAK ++D+
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
           DVISLDG DPL+TE+ETD NGRIR+RIRRS SS PDS +SSS+CLTPRASNLSNAEIFS+
Sbjct: 181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCLTPRASNLSNAEIFSV 240

Query: 240 NTPAPLHDYH----------YNSNNEIVFW------------GSATSP-RLSNYASSDAY 276
           NTP     +H          YN +NEI+F             G   SP RLS YASSDAY
Sbjct: 241 NTPNN-RFFHGGGGSGTLQFYNGSNEIMFCNGDLGGFGFTRPGLGASPRRLSGYASSDAY 299

Query: 277 SLQPTPRASNFNEMD 291
           SLQPTPRASNFNE+D
Sbjct: 300 SLQPTPRASNFNELD 314

May act as a component of the auxin efflux carrier.
Arabidopsis thaliana (taxid: 3702)

>sp|Q67UL3|PIN1C_ORYSJ Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica GN=PIN1C PE=2 SV=1

 Score =  333 bits (853), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 174/299 (58%), Positives = 219/299 (73%), Gaps = 17/299 (5%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MITG DFY VM AMVPLY AM++AYGSVKWWRIFTP QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1   MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWA-IFFKGGLDWLITLFSVATLPNTLVMGIPL 119
            NNPY M+ +FI ADTL K++VL LL++W+ +  +G L+W ITLFS++TLPNTLVMGIPL
Sbjct: 61  TNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L  MYGEF+ SLMVQ+VVLQCIIWYTL+LF+FEYR A +LI  QFP  A A IA   +D 
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGA-IASIVVDA 179

Query: 180 DVISLDG-RDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICL---TPRASNLSNAE 235
           DV+SLDG RD ++TE+E   +G+I V +RRS +S  D     S+     TPR SNL+NAE
Sbjct: 180 DVVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAE 239

Query: 236 IFSINT---PAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ--PTPRASNFNE 289
           I+S+ +   P P      +S N   F+  +   R SN+A+ DA+ ++   TPR SN+ E
Sbjct: 240 IYSLQSSRNPTP----RGSSFNHTDFY--SMVGRSSNFAAGDAFGVRTGATPRPSNYEE 292

May act as a component of the auxin efflux carrier.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C6B8|PINI_ARATH Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1

 Score =  328 bits (842), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 171/299 (57%), Positives = 212/299 (70%), Gaps = 15/299 (5%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT  DFY VM AMVPLY AM++AYGSVKWW+IFTP QCSGINRFVA+FAVP+LSFHFIA
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
            NNPY M+ +F+ AD+L KV+VL LL +W    + G LDW ITLFS++TLPNTLVMGIPL
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L  MYG F+  LMVQ+VVLQCIIWYTL+LFLFEYR A +LI  QFP   A SI    +D+
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPD-TAGSIVSIHVDS 179

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPD--SALSSSICLTPRASNLSNAEIF 237
           D++SLDGR PL+TE+E   +G++ V +RRS +S  D  S  S  +  TPR SNL+NAEI+
Sbjct: 180 DIMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSATPRPSNLTNAEIY 239

Query: 238 SINT---PAPLHDYHYNSNNEIVFWG--SATSPRLSNYASSDAY--SLQPTPRASNFNE 289
           S+ +   P P      +S N   F+   ++   R SN+   +A   S  PTPR SN+ E
Sbjct: 240 SLQSSRNPTP----RGSSFNHTDFYSMMASGGGRNSNFGPGEAVFGSKGPTPRPSNYEE 294

Acts as a component of the auxin efflux carrier. Seems to be involved in the basipetal auxin transport. Mediates the formation of auxin gradient which is required to ensure correct organogenesis. Coordinated polar localization of PIN1 is directly regulated by the vesicle trafficking process and apical-basal PIN1 polarity also depends on the phosphorylation of conserved serine residues by PID kinase. The ARF-GEF protein GNOM is required for the correct recycling of PIN1 between the plasma membrane and endosomal compartments.

Arabidopsis thaliana (taxid: 3702)

>sp|Q940Y5|PIN7_ARATH Auxin efflux carrier component 7 OS=Arabidopsis thaliana GN=PIN7 PE=1 SV=2

 Score =  327 bits (839), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 165/295 (55%), Positives = 218/295 (73%), Gaps = 11/295 (3%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT +D Y V+ A++PLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
            NNPY M+ +FI ADTL K+++L LL +WA F + G L+W IT+FS++TLPNTLVMGIPL
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYGE++ SLMVQ+VVLQCIIWYTLLLFLFEYR A +LI  QFP    ASI  F++++
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFP-ETGASIVSFKVES 179

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
           DV+SLDG D L+T+++   +G++ V +R+S +S           +TPR SNL+ AEI+S+
Sbjct: 180 DVVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFYGGGGTNMTPRPSNLTGAEIYSL 239

Query: 240 N-TPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNE 289
           N TP   +  H +  + + F G     RLSN+  +D YS+Q    PTPR SNF E
Sbjct: 240 NTTPRGSNFNHSDFYSMMGFPGG----RLSNFGPADMYSVQSSRGPTPRPSNFEE 290

Acts as a component of the auxin efflux carrier. Mediates the initial auxin gradient which contributes to the establishment of the apical-basal axis in early embryogenesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5SMQ9|PIN1_ORYSJ Auxin efflux carrier component 1 OS=Oryza sativa subsp. japonica GN=PIN1 PE=2 SV=1

 Score =  327 bits (838), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 171/299 (57%), Positives = 217/299 (72%), Gaps = 17/299 (5%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT  DFY VM AMVPLY AM++AYGSVKWWRIFTP QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWA-IFFKGGLDWLITLFSVATLPNTLVMGIPL 119
            NNPY M+ +FI ADTL K++VL +L+ W+ +  +G L+W ITLFS++TLPNTLVMGIPL
Sbjct: 61  TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L  MYGEF+ SLMVQ+VVLQCIIWYTL+LF+FEYR A +LI  QFP   AA+IA   +D 
Sbjct: 121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPD-TAANIASIVVDP 179

Query: 180 DVISLDG-RDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICL---TPRASNLSNAE 235
           DV+SLDG RD ++TE+E   +GRI V +RRS +S  D     S+     TPR SNL+NAE
Sbjct: 180 DVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMGFSSTTPRPSNLTNAE 239

Query: 236 IFSINT---PAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ--PTPRASNFNE 289
           I+S+ +   P P      +S N   F+      R SN+ ++DA+ ++   TPR SN+ +
Sbjct: 240 IYSLQSSRNPTP----RGSSFNHTDFYSMVG--RSSNFGAADAFGVRTGATPRPSNYED 292

Acts as a component of the auxin efflux carrier. Seems to be involved in the polar auxin transport which may promote adventitious root emergence and control tillering.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8RWZ6|PIN4_ARATH Auxin efflux carrier component 4 OS=Arabidopsis thaliana GN=PIN4 PE=1 SV=1

 Score =  326 bits (836), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 166/298 (55%), Positives = 222/298 (74%), Gaps = 17/298 (5%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT +D Y V+ A+VPLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1   MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
            N+PY M+ +F+ ADTL K+++LVLL++WA   K G L+W+IT+FS++TLPNTLVMGIPL
Sbjct: 61  TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYG +  SLMVQ+VVLQCIIWYTLLLFLFEYR A +LI  QFP    ASI  F++++
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFP-ETGASIVSFKVES 179

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
           DV+SLDG D L+T++E   +G++ V +R+S +S        S+ +TPR SNL+ AEI+S+
Sbjct: 180 DVVSLDGHDFLETDAEIGNDGKLHVTVRKSNAS------RRSLMMTPRPSNLTGAEIYSL 233

Query: 240 -NTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNEMDA 292
            +TP   +  H +  + + F G     RLSN+  +D YS+Q    PTPR SNF E +A
Sbjct: 234 SSTPRGSNFNHSDFYSVMGFPGG----RLSNFGPADLYSVQSSRGPTPRPSNFEENNA 287

Acts as a component of the auxin efflux carrier. Plays a role in generating a sink for auxin into columella cells. Maintains the endogenous auxin gradient, which is essential for correct root patterning.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S7Z8|PIN3_ARATH Auxin efflux carrier component 3 OS=Arabidopsis thaliana GN=PIN3 PE=1 SV=1

 Score =  324 bits (830), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 167/298 (56%), Positives = 221/298 (74%), Gaps = 20/298 (6%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MI+ +D Y V+ A++PLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
            NNPY M+ +FI ADTL K+++L LL +WA F + G L+W IT+FS++TLPNTLVMGIPL
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYGE++ SLMVQ+VVLQCIIWYTLLLFLFE+R A +LI  QFP   AASI  F++++
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFP-ETAASIVSFKVES 179

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSIC---LTPRASNLSNAEI 236
           DV+SLDG D L+T++E   +G++ V +R+S +S        S C   +TPR SNL+ AEI
Sbjct: 180 DVVSLDGHDFLETDAEIGDDGKLHVTVRKSNAS------RRSFCGPNMTPRPSNLTGAEI 233

Query: 237 FSIN-TPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNE 289
           +S++ TP   +  H +  N + F G     RLSN+  +D YS+Q    PTPR SNF E
Sbjct: 234 YSLSTTPRGSNFNHSDFYNMMGFPGG----RLSNFGPADMYSVQSSRGPTPRPSNFEE 287

Acts as a component of the auxin efflux carrier. Seems to be involved in the lateral auxin transport system and mediates tropic growth. Coordinated polar localization of PIN3 is directly regulated by the vesicle trafficking process.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LU77|PIN2_ARATH Auxin efflux carrier component 2 OS=Arabidopsis thaliana GN=PIN2 PE=1 SV=2

 Score =  311 bits (798), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 169/317 (53%), Positives = 220/317 (69%), Gaps = 31/317 (9%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MITG D Y V+ AMVPLY AM++AYGSV+WW IFTP QCSGINRFVAVFAVP+LSFHFI+
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIF-FKGGLDWLITLFSVATLPNTLVMGIPL 119
            N+PY M+  F+ AD+L KV++L  L +W  F  +G L+W+ITLFS++TLPNTLVMGIPL
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYG+F+ +LMVQ+VVLQ IIWYTL+LFLFE+R A +LI  QFP   A SI  F +D+
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFP-ETAGSITSFRVDS 179

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRST---------SSAPDSALSSSICLTPRASN 230
           DVISL+GR+PL+T++E   +G++ V +RRS+         + +    L+SS+ +TPRASN
Sbjct: 180 DVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSM-ITPRASN 238

Query: 231 LSNAEIFSINT---PAPLHDYHYNSNNEIVFWGS-ATSPRLSNYASS----------DAY 276
           L+  EI+S+ +   P P       ++   +F  S A SPR   Y +S          D Y
Sbjct: 239 LTGVEIYSVQSSREPTPRASSFNQTDFYAMFNASKAPSPR-HGYTNSYGGAGAGPGGDVY 297

Query: 277 SLQP----TPRASNFNE 289
           SLQ     TPR SNF+E
Sbjct: 298 SLQSSKGVTPRTSNFDE 314

Acts as a component of the auxin efflux carrier. Seems to be involved in the root-specific auxin transport, and mediates the root gravitropism. Its particular localization suggest a role in the translocation of auxin towards the elongation zone.

Arabidopsis thaliana (taxid: 3702)

>sp|Q651V6|PIN2_ORYSJ Probable auxin efflux carrier component 2 OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1

 Score =  301 bits (771), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 159/312 (50%), Positives = 201/312 (64%), Gaps = 56/312 (17%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MITG D Y V+ A+VPLY AM +AYGSV+WW IFTP QCSGINRFVAVFAVP+LSFHFI+
Sbjct: 1   MITGRDIYDVLAAIVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFF-----KGG----LDWLITLFSVATLPN 111
            N+PY M+ +F+ AD+L K+++L  L+VW          GG    LDW ITLFS++TLPN
Sbjct: 61  TNDPYSMNYRFLAADSLQKLVILAALAVWHNLLSRYRRNGGAAASLDWTITLFSLSTLPN 120

Query: 112 TLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAAS 171
           TLVMGIPLL AMYG+F+ SLMVQ+VVLQ +IWYTL+LFLFEYR A  LI  QFP    AS
Sbjct: 121 TLVMGIPLLRAMYGDFSGSLMVQIVVLQSVIWYTLMLFLFEYRGAKALISEQFPPDVGAS 180

Query: 172 IAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAP------------DSALS 219
           IA F +D+DV+SL+GR+ L+ ++E   +GR+ V IRRS S++               A  
Sbjct: 181 IASFRVDSDVVSLNGREALQADAEVGRDGRVHVVIRRSASASTTGGGGGAARSGVSRAYG 240

Query: 220 SSICLTPRASNLSNAEIFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ 279
           +S  +TPRASNL+  EI+S+ T                                   S +
Sbjct: 241 ASNAMTPRASNLTGVEIYSLQT-----------------------------------SRE 265

Query: 280 PTPRASNFNEMD 291
           PTPRAS+FN+ D
Sbjct: 266 PTPRASSFNQAD 277

May act as a component of the auxin efflux carrier.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5VP70|PIN3A_ORYSJ Probable auxin efflux carrier component 3a OS=Oryza sativa subsp. japonica GN=PIN3A PE=2 SV=1

 Score =  290 bits (743), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 166/308 (53%), Positives = 215/308 (69%), Gaps = 24/308 (7%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MI+G+DFY VM A+VPLY AM +AYGSV+WW IFTP QCSGINRFVA+FAVP+LSFHFI+
Sbjct: 1   MISGHDFYTVMAAVVPLYVAMFLAYGSVRWWGIFTPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWA-IFFKGG---LDWLITLFSVATLPNTLVMG 116
            N+PY M+ +F+ ADTL K+LVL  L+ W+ +  + G   LDW ITLFS++TLPNTLVMG
Sbjct: 61  TNDPYAMNLRFLAADTLQKLLVLAGLAAWSRLPSRTGAPRLDWSITLFSLSTLPNTLVMG 120

Query: 117 IPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFE 176
           IPLL AMYG ++ SLMVQ+VVLQCIIWYTL+LFLFE+RAA +LI  QFP   AASI    
Sbjct: 121 IPLLIAMYGPYSGSLMVQIVVLQCIIWYTLMLFLFEFRAARMLIADQFPD-TAASIVSLH 179

Query: 177 LDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEI 236
           +D DV+SL+G    +TE+E   +GR+ V +RRS+ S        S+ +TPR SNL+ AEI
Sbjct: 180 VDPDVVSLEGGH-AETEAEVAADGRLHVTVRRSSVS------RRSLLVTPRPSNLTGAEI 232

Query: 237 FSINT---PAPL-----HDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRA 284
           +S+++   P P      H   +          +  + R S++ +S+ YSLQ    PTPR 
Sbjct: 233 YSLSSSRNPTPRGSNFNHADFFAMVGGGPPPPTPAAVRGSSFGASELYSLQSSRGPTPRQ 292

Query: 285 SNFNEMDA 292
           SNF+E  A
Sbjct: 293 SNFDEHSA 300

May act as a component of the auxin efflux carrier.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
224082398	534	auxin efflux carrier component [Populus	0.996	0.544	0.836	1e-146
224066749	532	auxin efflux carrier component [Populus	0.996	0.546	0.824	1e-140
255570418	544	Auxin efflux carrier component, putative	0.993	0.533	0.800	1e-140
359492309	532	PREDICTED: probable auxin efflux carrier	0.993	0.545	0.825	1e-135
350539579	538	auxin efflux facilitator SlPIN6 [Solanum	0.989	0.537	0.818	1e-132
147810362	512	hypothetical protein VITISV_025052 [Viti	0.938	0.535	0.824	1e-131
302142759	527	unnamed protein product [Vitis vinifera]	0.938	0.519	0.824	1e-131
15223837	570	putative auxin efflux carrier component	0.993	0.508	0.733	1e-127
5817303	570	auxin transport protein [Arabidopsis tha	0.993	0.508	0.730	1e-127
356551177	464	PREDICTED: probable auxin efflux carrier	0.976	0.614	0.750	1e-123

>gi|224082398|ref|XP_002306678.1| auxin efflux carrier component [Populus trichocarpa] gi|222856127|gb|EEE93674.1| auxin efflux carrier component [Populus trichocarpa]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 256/306 (83%), Positives = 275/306 (89%), Gaps = 15/306 (4%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT +DFYKVMCAMVPLYFAML+AYGSVKW++IFTP+QCSGINRFVAVFAVPVLSFHFIA
Sbjct: 1   MITADDFYKVMCAMVPLYFAMLVAYGSVKWYKIFTPEQCSGINRFVAVFAVPVLSFHFIA 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLL 120
           QNNPYQMDTKFILADTLSKVL LVLLSVWA+FF G  DWLITLFSVATLPNTLVMGIPLL
Sbjct: 61  QNNPYQMDTKFILADTLSKVLALVLLSVWAVFFNGEFDWLITLFSVATLPNTLVMGIPLL 120

Query: 121 SAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDND 180
            AMYG+FTQSLMVQ+VVLQCIIWYTLLLFLFEYRAAT+LI+ QFPGP AA+I+K ELD+D
Sbjct: 121 KAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRAATLLIKAQFPGPTAATISKIELDDD 180

Query: 181 VISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSIN 240
           VISLDGRDPL+TESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPR SNLSNAE+FS+N
Sbjct: 181 VISLDGRDPLRTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRPSNLSNAEVFSVN 240

Query: 241 TPAPLHDYH-YNS------NNEIVF--------WGSATSPRLSNYASSDAYSLQPTPRAS 285
           TP PLH+YH YN       NNEIV         + S TSPRLS YASSDAYSLQPTPRAS
Sbjct: 241 TPVPLHEYHGYNGHFSHGPNNEIVLCNGDLGLAYRSGTSPRLSGYASSDAYSLQPTPRAS 300

Query: 286 NFNEMD 291
           NFNE+D
Sbjct: 301 NFNELD 306

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066749|ref|XP_002302196.1| auxin efflux carrier component [Populus trichocarpa] gi|222843922|gb|EEE81469.1| auxin efflux carrier component [Populus trichocarpa]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/307 (82%), Positives = 274/307 (89%), Gaps = 16/307 (5%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT  DFYKVMCAMVPLYFAML+AYGSVK ++IFTP+QCSGINRFVAVFAVPVLSFHFIA
Sbjct: 1   MITAGDFYKVMCAMVPLYFAMLVAYGSVKRYKIFTPEQCSGINRFVAVFAVPVLSFHFIA 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLL 120
           QNNPYQMDT+FI+ADTLSKVLVLVLLS+W IFF GGLDWLITLFS+ATLPNTLVMGIPLL
Sbjct: 61  QNNPYQMDTRFIMADTLSKVLVLVLLSIWVIFFNGGLDWLITLFSIATLPNTLVMGIPLL 120

Query: 121 SAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDND 180
            AMYG+FTQSLMVQ+VVLQCIIWYTLLLFLFEYRAAT+LI+TQFPGP AASI+K ELDND
Sbjct: 121 KAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRAATLLIKTQFPGPKAASISKIELDND 180

Query: 181 VISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSIN 240
           VISLDGRDPL+TESETDGNGR+RVRIRRSTSSAPDSALSSSICLTPR SNLSNAE+FS++
Sbjct: 181 VISLDGRDPLRTESETDGNGRLRVRIRRSTSSAPDSALSSSICLTPRPSNLSNAEVFSVS 240

Query: 241 TPAPLHDYH-YNS------NNEIV---------FWGSATSPRLSNYASSDAYSLQPTPRA 284
           TPAPL +YH YN       NNEI+         +  S TSPRLS YASSDAYSLQPTPR 
Sbjct: 241 TPAPLQEYHGYNGRFSHGPNNEIMLCNGDLGFGYHRSGTSPRLSGYASSDAYSLQPTPRT 300

Query: 285 SNFNEMD 291
           SNFNE D
Sbjct: 301 SNFNEWD 307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570418|ref|XP_002526168.1| Auxin efflux carrier component, putative [Ricinus communis] gi|223534545|gb|EEF36244.1| Auxin efflux carrier component, putative [Ricinus communis]

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 253/316 (80%), Positives = 273/316 (86%), Gaps = 26/316 (8%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT +DFYKVMCAMVPLYFAML+AYGSVKW ++FTP+QCSGINRFVAVFAVPVLSFHFI+
Sbjct: 1   MITADDFYKVMCAMVPLYFAMLVAYGSVKW-KVFTPEQCSGINRFVAVFAVPVLSFHFIS 59

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLL 120
           +NNPYQMDTKFILADTLSKVLVL +LSVWAIFF GGLDWLITLFSVATLPNTLVMGIPLL
Sbjct: 60  KNNPYQMDTKFILADTLSKVLVLAVLSVWAIFFNGGLDWLITLFSVATLPNTLVMGIPLL 119

Query: 121 SAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDND 180
            AMYG+FTQSLMVQ+VVLQCIIWYTLLLFLFEYRAAT+LI+TQFPGP AASI K ELD D
Sbjct: 120 MAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRAATLLIKTQFPGPTAASITKIELDTD 179

Query: 181 VISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALS-SSICLTPRASNLSNAEIFSI 239
           VISLDGRDPL+TESETDGNGRIRVRIRRSTSSAPDSALS SSI LTPR SNLSNAEIFS+
Sbjct: 180 VISLDGRDPLRTESETDGNGRIRVRIRRSTSSAPDSALSISSINLTPRPSNLSNAEIFSV 239

Query: 240 NTPAPLHDYHYNS-----------------------NNEIVF-WGSATSPRLSNYASSDA 275
           NTPAP HDY+ ++                       N ++ F + S TSPRLS YASSDA
Sbjct: 240 NTPAPFHDYNIHNPNNIYNLYNNNHGGTNNNEIIICNGDLGFGYRSGTSPRLSGYASSDA 299

Query: 276 YSLQPTPRASNFNEMD 291
           YSLQPTPRASNFNEMD
Sbjct: 300 YSLQPTPRASNFNEMD 315

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492309|ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier component 6-like [Vitis vinifera]

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/298 (82%), Positives = 272/298 (91%), Gaps = 8/298 (2%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MI+ +DFYKVMCAMVPLYFAML+AYGSVKW +IF+P+QCSGINRFVAVFAVPVLSFHFI+
Sbjct: 1   MISADDFYKVMCAMVPLYFAMLVAYGSVKWCKIFSPEQCSGINRFVAVFAVPVLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLL 120
           QNNPY+MDTKFI+ADTLSK+LVLVLLSVWAI FKGGLDWLITLFS+ATLPNTLVMGIPLL
Sbjct: 61  QNNPYEMDTKFIVADTLSKLLVLVLLSVWAILFKGGLDWLITLFSLATLPNTLVMGIPLL 120

Query: 121 SAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDND 180
           +AMYG+FTQSLMVQLVVLQCIIWYTLLLFLFEYRAAT+LI+ QFPG  AASI+KFE+D D
Sbjct: 121 NAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIKNQFPGSTAASISKFEIDGD 180

Query: 181 VISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSIN 240
           VISLDGRDP++TESE DGNGRIRVRIRRSTSSAPDSALSSS+ +TPRASNLS AEIFS+N
Sbjct: 181 VISLDGRDPVRTESEIDGNGRIRVRIRRSTSSAPDSALSSSMGITPRASNLSGAEIFSVN 240

Query: 241 TPAPLHDYHYNSNNEIVFWGS-------ATSPRLSNYASSDAYSLQPTPRASNFNEMD 291
           TPAPLH+YH N N +I F          + SPRLS YASSDAYSLQPTPRASNFNE+D
Sbjct: 241 TPAPLHEYH-NGNADIAFGNGDLGFGYRSASPRLSGYASSDAYSLQPTPRASNFNELD 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350539579|ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lycopersicum] gi|327187149|gb|ADR30414.2| auxin efflux facilitator SlPIN6 [Solanum lycopersicum]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 239/292 (81%), Positives = 261/292 (89%), Gaps = 3/292 (1%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MI  NDFYKVMCAMVPLYFAM++AYGSVKWW+IF+P+QCSGINRFVAVFAVPVLSFHFI+
Sbjct: 1   MIGVNDFYKVMCAMVPLYFAMIVAYGSVKWWKIFSPEQCSGINRFVAVFAVPVLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLL 120
           QNNPYQMDTKFILADTLSK+LVLVLLSVWAI  KG LDWLITLFSV+TLPNTLVMGIPLL
Sbjct: 61  QNNPYQMDTKFILADTLSKILVLVLLSVWAIC-KGQLDWLITLFSVSTLPNTLVMGIPLL 119

Query: 121 SAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDND 180
           +AMYG+FTQSLMVQLVVLQCIIWYTLLLFLFEYRAAT+LI+ QFPG  AASI KFE+DND
Sbjct: 120 NAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATILIKNQFPGNVAASITKFEIDND 179

Query: 181 VISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSIN 240
           VISLDGR+PL TESE DGNGRI VRIRRSTSSAP+SA SSSI +TPRASNLSNAEIFS++
Sbjct: 180 VISLDGRNPLCTESEIDGNGRIHVRIRRSTSSAPESAFSSSIGITPRASNLSNAEIFSVH 239

Query: 241 TPAPLHDYHYNSNNEIVFWGSATSPRLS-NYASSDAYSLQPTPRASNFNEMD 291
           TP    D  +   +  V +  A SPRLS  YASSDAYSLQPTPRASNFNE+D
Sbjct: 240 TPLHNGDIPFGHGDLGVGF-RAASPRLSGGYASSDAYSLQPTPRASNFNELD 290

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147810362|emb|CAN65343.1| hypothetical protein VITISV_025052 [Vitis vinifera]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/291 (82%), Positives = 263/291 (90%), Gaps = 17/291 (5%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MI+ +DFYKVMCAMVPLYFAML+AYGSVKW +IF+P+QCSGINRFVAVFAVPVLSFHFI+
Sbjct: 1   MISADDFYKVMCAMVPLYFAMLVAYGSVKWCKIFSPEQCSGINRFVAVFAVPVLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLL 120
           QNNPY+MDTKFI+ADTLSK+LVLVLLSVWAI FKGGLDWLITLFS+ATLPNTLVMGIPLL
Sbjct: 61  QNNPYEMDTKFIVADTLSKLLVLVLLSVWAILFKGGLDWLITLFSLATLPNTLVMGIPLL 120

Query: 121 SAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDND 180
           +AMYG+FTQSLMVQLVVLQCIIWYTLLLFLFEYRAAT+LI+ QFPG  AASI+KFE+D D
Sbjct: 121 NAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIKNQFPGSTAASISKFEIDGD 180

Query: 181 VISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSIN 240
           VISLDGRDP++TESE DGNGRIRVRIRRSTSSAPDSALSSS+ +TPRASNLS AEIFS+N
Sbjct: 181 VISLDGRDPVRTESEIDGNGRIRVRIRRSTSSAPDSALSSSMGITPRASNLSGAEIFSVN 240

Query: 241 TPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASNFNEMD 291
           TPAPLHD                 PRLS YASSDAYSLQPTPRASNFNE+D
Sbjct: 241 TPAPLHD-----------------PRLSGYASSDAYSLQPTPRASNFNELD 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142759|emb|CBI19962.3| unnamed protein product [Vitis vinifera]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 240/291 (82%), Positives = 263/291 (90%), Gaps = 17/291 (5%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MI+ +DFYKVMCAMVPLYFAML+AYGSVKW +IF+P+QCSGINRFVAVFAVPVLSFHFI+
Sbjct: 1   MISADDFYKVMCAMVPLYFAMLVAYGSVKWCKIFSPEQCSGINRFVAVFAVPVLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLL 120
           QNNPY+MDTKFI+ADTLSK+LVLVLLSVWAI FKGGLDWLITLFS+ATLPNTLVMGIPLL
Sbjct: 61  QNNPYEMDTKFIVADTLSKLLVLVLLSVWAILFKGGLDWLITLFSLATLPNTLVMGIPLL 120

Query: 121 SAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDND 180
           +AMYG+FTQSLMVQLVVLQCIIWYTLLLFLFEYRAAT+LI+ QFPG  AASI+KFE+D D
Sbjct: 121 NAMYGDFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIKNQFPGSTAASISKFEIDGD 180

Query: 181 VISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSIN 240
           VISLDGRDP++TESE DGNGRIRVRIRRSTSSAPDSALSSS+ +TPRASNLS AEIFS+N
Sbjct: 181 VISLDGRDPVRTESEIDGNGRIRVRIRRSTSSAPDSALSSSMGITPRASNLSGAEIFSVN 240

Query: 241 TPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASNFNEMD 291
           TPAPLHD                 PRLS YASSDAYSLQPTPRASNFNE+D
Sbjct: 241 TPAPLHD-----------------PRLSGYASSDAYSLQPTPRASNFNELD 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223837|ref|NP_177836.1| putative auxin efflux carrier component 6 [Arabidopsis thaliana] gi|42558888|sp|Q9SQH6.2|PIN6_ARATH RecName: Full=Probable auxin efflux carrier component 6; Short=AtPIN6 gi|332197815|gb|AEE35936.1| putative auxin efflux carrier component 6 [Arabidopsis thaliana]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/315 (73%), Positives = 260/315 (82%), Gaps = 25/315 (7%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MITGN+FY VMCAM PLYFAM +AYGSVKW +IFTP QCSGINRFV+VFAVPVLSFHFI+
Sbjct: 1   MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
           QNNPY+MDT FILADTLSK+ V VLLS+WA+FFK GGLDWLITLFS+ATLPNTLVMGIPL
Sbjct: 61  QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYG++TQ+LMVQLVVLQCIIWYTLLLFLFE RAA +LI+ +FPG AA SIAK ++D+
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
           DVISLDG DPL+TE+ETD NGRIR+RIRRS SS PDS +SSS+CLTPRASNLSNAEIFS+
Sbjct: 181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCLTPRASNLSNAEIFSV 240

Query: 240 NTPAPLHDYH----------YNSNNEIVFW------------GSATSP-RLSNYASSDAY 276
           NTP     +H          YN +NEI+F             G   SP RLS YASSDAY
Sbjct: 241 NTPNN-RFFHGGGGSGTLQFYNGSNEIMFCNGDLGGFGFTRPGLGASPRRLSGYASSDAY 299

Query: 277 SLQPTPRASNFNEMD 291
           SLQPTPRASNFNE+D
Sbjct: 300 SLQPTPRASNFNELD 314

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5817303|gb|AAD52696.1|AF087819_1 auxin transport protein [Arabidopsis thaliana]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/315 (73%), Positives = 259/315 (82%), Gaps = 25/315 (7%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MITGN+FY VMCAM PLYFAM +AYGSVKW +IFTP QCSGINRFV+VFAVPVLSFHFI+
Sbjct: 1   MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
           QNNPY+MDT FILADTLSK+ V VLLS+WA+FFK GGLDWLITLFS+ATLPNTLVMGIPL
Sbjct: 61  QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYG++TQ+LMVQLVVLQCIIWYTLLLFLFE RAA +LI+ +FPG AA SIAK ++D+
Sbjct: 121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSI 239
           DVISLDG DPL+TE+ETD NGRIR+RIRRS SS PDS +S S+CLTPRASNLSNAEIFS+
Sbjct: 181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSPSLCLTPRASNLSNAEIFSV 240

Query: 240 NTPAPLHDYH----------YNSNNEIVFW------------GSATSP-RLSNYASSDAY 276
           NTP     +H          YN +NEI+F             G   SP RLS YASSDAY
Sbjct: 241 NTPNN-RFFHGGGGSGTLQFYNGSNEIMFCNGDLGGFGFTRPGLGASPRRLSGYASSDAY 299

Query: 277 SLQPTPRASNFNEMD 291
           SLQPTPRASNFNE+D
Sbjct: 300 SLQPTPRASNFNELD 314

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551177|ref|XP_003543954.1| PREDICTED: probable auxin efflux carrier component 6-like [Glycine max]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/297 (75%), Positives = 250/297 (84%), Gaps = 12/297 (4%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MITG D YKVMCAMVPLYFAML+AYGSVKW ++FTP QCSGINRFVAVFAVP+LSFHFI+
Sbjct: 1   MITGEDLYKVMCAMVPLYFAMLVAYGSVKWCKMFTPDQCSGINRFVAVFAVPILSFHFIS 60

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
            NNPY+MD KFI+ADTLSK+ VL+ LS+WA+FF GG LDWLIT FS+ATLPNTLVMGIPL
Sbjct: 61  MNNPYEMDAKFIVADTLSKLAVLLFLSLWAVFFAGGSLDWLITFFSLATLPNTLVMGIPL 120

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
           L AMYG+FTQSLMVQLVVLQC IWYTLLLFLFEYRAAT+LIQ QFPGP AASIAKF++D 
Sbjct: 121 LQAMYGDFTQSLMVQLVVLQCTIWYTLLLFLFEYRAATLLIQRQFPGPTAASIAKFDVDG 180

Query: 180 DVISLDGRD-PLKTESETDGNGRIRVRIRRSTSSAPDSALS---SSICLTPRASNLSNAE 235
           DVISLDG D PL+TESETD +GRI VRIRRS SSAP++  S   ++  +TPR SNLSNA+
Sbjct: 181 DVISLDGHDMPLRTESETDDHGRIHVRIRRSVSSAPETNSSIGGNTTVVTPRQSNLSNAD 240

Query: 236 IFSINTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQPTPRASNFNEMDA 292
           IFSINTP  LH+   N         +  SP LS YASSDAYSLQPTPRASNFNEM+A
Sbjct: 241 IFSINTPLHLHEGGGN-------LAAGASPHLSGYASSDAYSLQPTPRASNFNEMEA 290

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	292
TAIR|locus:2025312	570	PIN6 "AT1G77110" [Arabidopsis	0.883	0.452	0.671	2.8e-103
TAIR|locus:2201225	619	PIN7 "AT1G23080" [Arabidopsis	0.976	0.460	0.527	1e-75
TAIR|locus:2013975	640	PIN3 "AT1G70940" [Arabidopsis	0.962	0.439	0.528	3.1e-74
TAIR|locus:2035037	622	PIN1 "AT1G73590" [Arabidopsis	0.972	0.456	0.528	1.7e-73
UNIPROTKB|Q5SMQ9	595	PIN1 "Auxin efflux carrier com	0.972	0.477	0.526	2.8e-73
TAIR|locus:2038781	616	PIN4 "AT2G01420" [Arabidopsis	0.962	0.456	0.520	2.8e-73
TAIR|locus:2175559	647	EIR1 "AT5G57090" [Arabidopsis	0.928	0.418	0.506	1.2e-67
TAIR|locus:2171392	351	PIN5 "AT5G16530" [Arabidopsis	0.534	0.444	0.477	2.4e-35
TAIR|locus:2147835	367	PIN8 "AT5G15100" [Arabidopsis	0.650	0.517	0.403	5.1e-35

TAIR|locus:2025312 PIN6 "AT1G77110" [Arabidopsis thaliana (taxid:3702)]

 Score = 909 (325.0 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
 Identities = 180/268 (67%), Positives = 203/268 (75%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MITGN+FY VMCAM PLYFAM +AYGSVKW +IFTP QCSGINRFV+VFAVPVLSFHFI+
Sbjct:     1 MITGNEFYTVMCAMAPLYFAMFVAYGSVKWCKIFTPAQCSGINRFVSVFAVPVLSFHFIS 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
             QNNPY+MDT FILADT            WA+FFK GGLDWLITLFS+ATLPNTLVMGIPL
Sbjct:    61 QNNPYKMDTMFILADTLSKIFVFVLLSLWAVFFKAGGLDWLITLFSIATLPNTLVMGIPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             L AMYG++TQ+LMVQLVVLQCIIWYTLLLFLFE RAA +LI+ +FPG AA SIAK ++D+
Sbjct:   121 LQAMYGDYTQTLMVQLVVLQCIIWYTLLLFLFELRAARLLIRAEFPGQAAGSIAKIQVDD 180

Query:   180 DVISLDGRDPLKTESETDGNGXXXXXXXXXXXXXXXXXXXXXICLTPRASNLSNAEIFSI 239
             DVISLDG DPL+TE+ETD NG                     +CLTPRASNLSNAEIFS+
Sbjct:   181 DVISLDGMDPLRTETETDVNGRIRLRIRRSVSSVPDSVMSSSLCLTPRASNLSNAEIFSV 240

Query:   240 NTPAP--LHD-------YHYNSNNEIVF 258
             NTP     H          YN +NEI+F
Sbjct:   241 NTPNNRFFHGGGGSGTLQFYNGSNEIMF 268

GO:0005215 "transporter activity" evidence=ISS

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS;IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

TAIR|locus:2201225 PIN7 "AT1G23080" [Arabidopsis thaliana (taxid:3702)]

 Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
 Identities = 155/294 (52%), Positives = 199/294 (67%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MIT +D Y V+ A++PLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct:     1 MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
              NNPY M+ +FI ADT            WA F + G L+W IT+FS++TLPNTLVMGIPL
Sbjct:    61 SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             L AMYGE++ SLMVQ+VVLQCIIWYTLLLFLFEYR A +LI  QFP    ASI  F++++
Sbjct:   121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYRGAKILIMEQFP-ETGASIVSFKVES 179

Query:   180 DVISLDGRDPLKTESETDGNGXXXXXXXXXXXXXXXXXXXXXICLTPRASNLSNAEIFSI 239
             DV+SLDG D L+T+++   +G                       +TPR SNL+ AEI+S+
Sbjct:   180 DVVSLDGHDFLETDAQIGDDGKLHVTVRKSNASRRSFYGGGGTNMTPRPSNLTGAEIYSL 239

Query:   240 NTPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNE 289
             NT  P    ++N ++     G     RLSN+  +D YS+Q    PTPR SNF E
Sbjct:   240 NT-TP-RGSNFNHSDFYSMMGFPGG-RLSNFGPADMYSVQSSRGPTPRPSNFEE 290

GO:0005215 "transporter activity" evidence=ISS

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009942 "longitudinal axis specification" evidence=IMP

GO:0007389 "pattern specification process" evidence=IGI;RCA

GO:0048364 "root development" evidence=IGI

GO:0005886 "plasma membrane" evidence=IDA

GO:0010329 "auxin efflux transmembrane transporter activity" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2013975 PIN3 "AT1G70940" [Arabidopsis thaliana (taxid:3702)]

 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 156/295 (52%), Positives = 201/295 (68%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MI+ +D Y V+ A++PLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct:     1 MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
              NNPY M+ +FI ADT            WA F + G L+W IT+FS++TLPNTLVMGIPL
Sbjct:    61 TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             L AMYGE++ SLMVQ+VVLQCIIWYTLLLFLFE+R A +LI  QFP   AASI  F++++
Sbjct:   121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFRGAKMLIMEQFP-ETAASIVSFKVES 179

Query:   180 DVISLDGRDPLKTESETDGNGXXXXXXXXXXXXXXXXXXXXXICLTPRASNLSNAEIFSI 239
             DV+SLDG D L+T++E   +G                       +TPR SNL+ AEI+S+
Sbjct:   180 DVVSLDGHDFLETDAEIGDDGKLHVTVRKSNASRRSFCGPN---MTPRPSNLTGAEIYSL 236

Query:   240 NT-PAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNE 289
             +T P   +  H +  N + F G     RLSN+  +D YS+Q    PTPR SNF E
Sbjct:   237 STTPRGSNFNHSDFYNMMGFPGG----RLSNFGPADMYSVQSSRGPTPRPSNFEE 287

GO:0005215 "transporter activity" evidence=ISS

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009606 "tropism" evidence=IMP

GO:0012506 "vesicle membrane" evidence=IDA

GO:0016328 "lateral plasma membrane" evidence=IDA

GO:0007389 "pattern specification process" evidence=IGI;RCA

GO:0010082 "regulation of root meristem growth" evidence=IGI

GO:0048364 "root development" evidence=IGI;IMP

GO:0009630 "gravitropism" evidence=TAS

GO:0009986 "cell surface" evidence=IDA

GO:0048766 "root hair initiation" evidence=IMP

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0009416 "response to light stimulus" evidence=IDA

GO:0009958 "positive gravitropism" evidence=IMP

GO:0010315 "auxin efflux" evidence=IMP

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0008356 "asymmetric cell division" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2035037 PIN1 "AT1G73590" [Arabidopsis thaliana (taxid:3702)]

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 158/299 (52%), Positives = 190/299 (63%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MIT  DFY VM AMVPLY AM++AYGSVKWW+IFTP QCSGINRFVA+FAVP+LSFHFIA
Sbjct:     1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
              NNPY M+ +F+ AD+            W    + G LDW ITLFS++TLPNTLVMGIPL
Sbjct:    61 ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             L  MYG F+  LMVQ+VVLQCIIWYTL+LFLFEYR A +LI  QFP   A SI    +D+
Sbjct:   121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYRGAKLLISEQFPD-TAGSIVSIHVDS 179

Query:   180 DVISLDGRDPLKTESET--DGNGXXXXXXXXXXXXXXXXXXXXXICLTPRASNLSNAEIF 237
             D++SLDGR PL+TE+E   DG                       +  TPR SNL+NAEI+
Sbjct:   180 DIMSLDGRQPLETEAEIKEDGKLHVTVRRSNASRSDIYSRRSQGLSATPRPSNLTNAEIY 239

Query:   238 SINT---PAPLHDYHYNSNNEIVFWGSATSP--RLSNYASSDAY--SLQPTPRASNFNE 289
             S+ +   P P      +S N   F+    S   R SN+   +A   S  PTPR SN+ E
Sbjct:   240 SLQSSRNPTP----RGSSFNHTDFYSMMASGGGRNSNFGPGEAVFGSKGPTPRPSNYEE 294

GO:0005215 "transporter activity" evidence=ISS;TAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0048367 "shoot system development" evidence=IMP

GO:0016020 "membrane" evidence=ISS

GO:0009925 "basal plasma membrane" evidence=IDA

GO:0048825 "cotyledon development" evidence=IGI

GO:0005737 "cytoplasm" evidence=IDA

GO:0045177 "apical part of cell" evidence=IDA

GO:0009640 "photomorphogenesis" evidence=RCA;TAS

GO:0009630 "gravitropism" evidence=IMP

GO:0009926 "auxin polar transport" evidence=RCA;IMP

GO:0010051 "xylem and phloem pattern formation" evidence=RCA;IMP

GO:0010338 "leaf formation" evidence=IGI

GO:0010358 "leaf shaping" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009790 "embryo development" evidence=IMP

GO:0009908 "flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048826 "cotyledon morphogenesis" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

GO:0009624 "response to nematode" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0048364 "root development" evidence=IMP;RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

UNIPROTKB|Q5SMQ9 PIN1 "Auxin efflux carrier component 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 159/302 (52%), Positives = 199/302 (65%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MIT  DFY VM AMVPLY AM++AYGSVKWWRIFTP QCSGINRFVA+FAVP+LSFHFI+
Sbjct:     1 MITAADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFIS 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWA-IFFKGGLDWLITLFSVATLPNTLVMGIPL 119
              NNPY M+ +FI ADT            W+ +  +G L+W ITLFS++TLPNTLVMGIPL
Sbjct:    61 TNNPYTMNLRFIAADTLQKLMVLAMLTAWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             L  MYGEF+ SLMVQ+VVLQCIIWYTL+LF+FEYR A +LI  QFP   AA+IA   +D 
Sbjct:   121 LKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLITEQFPD-TAANIASIVVDP 179

Query:   180 DVISLDGR-DPLKTESETDGNGXXXXXXXXXXXXXXXXXXXXXI---CLTPRASNLSNAE 235
             DV+SLDGR D ++TE+E   +G                     +     TPR SNL+NAE
Sbjct:   180 DVVSLDGRRDAIETETEVKEDGRIHVTVRRSNASRSDIYSRRSMGFSSTTPRPSNLTNAE 239

Query:   236 IFSINT---PAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQP--TPRASNFNEM 290
             I+S+ +   P P      +S N   F+      R SN+ ++DA+ ++   TPR SN+ + 
Sbjct:   240 IYSLQSSRNPTP----RGSSFNHTDFYSMVG--RSSNFGAADAFGVRTGATPRPSNYED- 292

Query:   291 DA 292
             DA
Sbjct:   293 DA 294

GO:0005215 "transporter activity" evidence=IMP

GO:0006810 "transport" evidence=IMP

GO:0009734 "auxin mediated signaling pathway" evidence=IMP

GO:0009921 "auxin efflux carrier complex" evidence=IMP

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0048830 "adventitious root development" evidence=IMP

TAIR|locus:2038781 PIN4 "AT2G01420" [Arabidopsis thaliana (taxid:3702)]

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 155/298 (52%), Positives = 201/298 (67%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MIT +D Y V+ A+VPLY AM++AYGSV+WW+IF+P QCSGINRFVA+FAVP+LSFHFI+
Sbjct:     1 MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFFKGG-LDWLITLFSVATLPNTLVMGIPL 119
              N+PY M+ +F+ ADT            WA   K G L+W+IT+FS++TLPNTLVMGIPL
Sbjct:    61 TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             L AMYG +  SLMVQ+VVLQCIIWYTLLLFLFEYR A +LI  QFP    ASI  F++++
Sbjct:   121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFP-ETGASIVSFKVES 179

Query:   180 DVISLDGRDPLKTESETDGNGXXXXXXXXXXXXXXXXXXXXXICLTPRASNLSNAEIFSI 239
             DV+SLDG D L+T++E   +G                     + +TPR SNL+ AEI+S+
Sbjct:   180 DVVSLDGHDFLETDAEIGNDGKLHVTVRKSNASRRS------LMMTPRPSNLTGAEIYSL 233

Query:   240 N-TPAPLHDYHYNSNNEIVFWGSATSPRLSNYASSDAYSLQ----PTPRASNFNEMDA 292
             + TP   +  H +  + + F G     RLSN+  +D YS+Q    PTPR SNF E +A
Sbjct:   234 SSTPRGSNFNHSDFYSVMGFPGG----RLSNFGPADLYSVQSSRGPTPRPSNFEENNA 287

GO:0005215 "transporter activity" evidence=ISS

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0048364 "root development" evidence=IMP

GO:0007389 "pattern specification process" evidence=IGI;RCA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2175559 EIR1 "AT5G57090" [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 145/286 (50%), Positives = 184/286 (64%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MITG D Y V+ AMVPLY AM++AYGSV+WW IFTP QCSGINRFVAVFAVP+LSFHFI+
Sbjct:     1 MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFFK-GGLDWLITLFSVATLPNTLVMGIPL 119
              N+PY M+  F+ AD+            W  F + G L+W+ITLFS++TLPNTLVMGIPL
Sbjct:    61 SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             L AMYG+F+ +LMVQ+VVLQ IIWYTL+LFLFE+R A +LI  QFP   A SI  F +D+
Sbjct:   121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFP-ETAGSITSFRVDS 179

Query:   180 DVISLDGRDPLKTESETDGNG--------XXXXXXXXXXXXXXXXXXXXXICLTPRASNL 231
             DVISL+GR+PL+T++E   +G                               +TPRASNL
Sbjct:   180 DVISLNGREPLQTDAEIGDDGKLHVVVRRSSAASSMISSFNKSHGGGLNSSMITPRASNL 239

Query:   232 SNAEIFSINT---PAPLHDYHYNSNNEIVFWGS-ATSPRLSNYASS 273
             +  EI+S+ +   P P       ++   +F  S A SPR   Y +S
Sbjct:   240 TGVEIYSVQSSREPTPRASSFNQTDFYAMFNASKAPSPR-HGYTNS 284

GO:0005215 "transporter activity" evidence=ISS

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS;RCA;IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0000323 "lytic vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009749 "response to glucose stimulus" evidence=IEP

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=IMP;RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046685 "response to arsenic-containing substance" evidence=RCA

GO:0048364 "root development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=IMP

GO:0009925 "basal plasma membrane" evidence=IDA

GO:0009958 "positive gravitropism" evidence=IMP

GO:0010329 "auxin efflux transmembrane transporter activity" evidence=IDA

TAIR|locus:2171392 PIN5 "AT5G16530" [Arabidopsis thaliana (taxid:3702)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 75/157 (47%), Positives = 96/157 (61%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MI   D YKV+ AMVPLY A+++ YGSVKWW IFT  QC  INR V  F +P+ +  F A
Sbjct:     1 MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFF-KGGLDWLITLFSVATLPNTLVMGIPL 119
               +P+ M+ +FI AD             WA +  KG   W IT FS+ TL N+LV+G+PL
Sbjct:    61 HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query:   120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAA 156
               AMYG+    L+VQ  V Q I+W TLLLF+ E+R A
Sbjct:   121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKA 157

GO:0005215 "transporter activity" evidence=ISS

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010252 "auxin homeostasis" evidence=IMP

GO:0080161 "auxin transmembrane transporter activity" evidence=IDA

GO:0080162 "intracellular auxin transport" evidence=IDA

GO:0009555 "pollen development" evidence=IGI;IMP

TAIR|locus:2147835 PIN8 "AT5G15100" [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 82/203 (40%), Positives = 127/203 (62%)

Query:     1 MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
             MI+  D Y V+ A VPLY +M + + S +  ++F+P+QC+GIN+FVA F++P+LSF  I+
Sbjct:     1 MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60

Query:    61 QNNPYQMDTKFILADTXXXXXXXXXXXXWAIFF-----KGG-LDWLITLFSVATLPNTLV 114
             +NNP++M  K IL+D                F+     +GG L W+IT  S++ LPNTL+
Sbjct:    61 ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120

Query:   115 MGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAK 174
             +G+P+LSA+YG+   S++ Q+VVLQ +IWYT+LLFLFE  AA  L     P  + AS+  
Sbjct:   121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARAL-----PS-SGASLEH 174

Query:   175 FELDNDVISLDGRDPLKTESETD 197
                D +  +++  +P + E E +
Sbjct:   175 TGNDQEEANIED-EPKEEEDEEE 196


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      292       259   0.00088  114 3  11 22  0.40    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  205 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.15u 0.15s 19.30t   Elapsed:  00:00:00
  Total cpu time:  19.15u 0.15s 19.30t   Elapsed:  00:00:00
  Start:  Mon May 20 16:26:02 2013   End:  Mon May 20 16:26:02 2013

GO:0005215 "transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009555 "pollen development" evidence=IGI;IMP

GO:0010252 "auxin homeostasis" evidence=IMP

GO:0010315 "auxin efflux" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SQH6	PIN6_ARATH	No assigned EC number	0.7333	0.9931	0.5087	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: PIN4 auxin efflux carrier component (534 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	292
pfam03547	321	pfam03547, Mem_trans, Membrane transport protein	1e-48
TIGR00946	321	TIGR00946, 2a69, he Auxin Efflux Carrier (AEC) Fam	2e-35
COG0679	311	COG0679, COG0679, Predicted permeases [General fun	1e-09

>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein

 Score =  164 bits (416), Expect = 1e-48
 Identities = 57/159 (35%), Positives = 82/159 (51%), Gaps = 4/159 (2%)

Query: 10  VMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQMDT 69
           V+ A++P++  ML+ Y + K   I  P Q SGIN+ V  FA+P+L F  I+ N   +M  
Sbjct: 2   VVEAVLPVFLIMLLGYLAGKS-GILPPDQASGINKLVVYFALPLLIFSSISTNVTLEMIV 60

Query: 70  KFILADTLSKVLVLVLLSVWAIF---FKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGE 126
            F L   L  ++V + L +  +    FK  L+W   L   +  PNT  +G+PLL A+YGE
Sbjct: 61  DFWLIPVLVVLIVAISLIIGFLVSKIFKLPLEWRGVLILTSAFPNTGFLGLPLLLALYGE 120

Query: 127 FTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFP 165
              S  +  VVL  II +TL  FL E R A      +  
Sbjct: 121 EGLSYAIISVVLGVIIIWTLGYFLIESRGAKRDKSEESG 159

This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life. Length = 321

>gnl|CDD|233203 TIGR00946, 2a69, he Auxin Efflux Carrier (AEC) Family

 Score =  129 bits (326), Expect = 2e-35
 Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 33/209 (15%)

Query: 1   MITGNDFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA 60
           MIT      V+  +V +    ++     K + I   +  SGINRFV  FA+P+  FH I+
Sbjct: 1   MITYVILETVLPILVVILLGYILG----KRFGILDEEHASGINRFVINFALPLTIFHSIS 56

Query: 61  QNNPYQMDTKFILADTLSKVLVLVLLSVWAIFF-KGGLDWLITLFSVATLPNTLVMGIPL 119
                       LAD L K    V+L +W  F     L WLIT               PL
Sbjct: 57  T----------TLADILQKSQSPVVLFLWGAFSGSYALIWLIT--------------KPL 92

Query: 120 LSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPGPAAASIAKFELDN 179
             A YG+ +  L+V  +     I Y LLL LF    A +LI   F     A +    L  
Sbjct: 93  FKADYGKLSGFLLVSALPNTAFIGYPLLLSLFGEEGAKILIAALFI-DTGAVLMTIALGL 151

Query: 180 DVISLDGRDPLKTESETDGNGRIRVRIRR 208
            ++S DG      E   +    + + + +
Sbjct: 152 FLVSEDGA---GGEGSGESTRLMLIFVWK 177

[Transport and binding proteins, Other]. Length = 321

>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only]

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 29/147 (19%), Positives = 67/147 (45%), Gaps = 4/147 (2%)

Query: 7   FYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNP-Y 65
              V   ++P++  +L+ Y   ++  I   +   G++R V   A+P L F+ IA  +   
Sbjct: 2   MMIVFEVVLPIFLIILLGYLLKRFG-ILDEEAARGLSRLVVYVALPALLFNSIATADLSG 60

Query: 66  QMDTKFILADTLSKVLV-LVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMY 124
             D   I+A  ++ +L   +L  +    FK      +     +  PN   +G+P+  +++
Sbjct: 61  LADLGLIVASLVATLLAFFLLALIGRFLFKLDKRETVIFALASAFPNIGFLGLPVALSLF 120

Query: 125 GEFTQSL-MVQLVVLQCIIWYTLLLFL 150
           GE   +  ++ L++   +++   ++ L
Sbjct: 121 GEKGLAYAVIFLIIGLFLMFTLGVILL 147

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	292
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	99.96
COG0679	311	Predicted permeases [General function prediction o	99.84
TIGR00946	321	2a69 he Auxin Efflux Carrier (AEC) Family.	99.82
PRK09903	314	putative transporter YfdV; Provisional	99.8
KOG2722	408	consensus Predicted membrane protein [Function unk	98.66
TIGR00841	286	bass bile acid transporter. Functionally character	97.16
PF13593	313	DUF4137: SBF-like CPA transporter family (DUF4137)	94.54
COG0798	342	ACR3 Arsenite efflux pump ACR3 and related permeas	92.41
PF05684	378	DUF819: Protein of unknown function (DUF819); Inte	92.36
TIGR00832	328	acr3 arsenical-resistance protein. The first prote	90.42
COG0385	319	Predicted Na+-dependent transporter [General funct	87.31

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=99.96  E-value=1.9e-28  Score=234.22  Aligned_cols=225  Identities=29%  Similarity=0.432  Sum_probs=185.7

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhcCCCChhhHhHHHHHHHHHHHHHHHHHHhhcCCCCC-c-hhHHHHHH-HHHHHHHHHHH
Q 041574           10 VMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQ-M-DTKFILAD-TLSKVLVLVLL   86 (292)
Q Consensus        10 vl~~IlPlfllIlLGyll~R~~~il~~~~~~~LnklV~~vaLPaLIF~sl~~~~~~~-l-~~~~ila~-~l~~li~~ll~   86 (292)
                      ++++++|+++++++||+++| +|++++++.+.++++|+|+++|||+|.++++....+ . ++.++... .+..++.+++.
T Consensus         2 v~~~i~~i~~ii~~G~~~~~-~~~l~~~~~~~ls~lv~~~~lP~liF~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (385)
T PF03547_consen    2 VFSAILPIFLIILLGYLLGR-FGILDPEASKGLSKLVFNVFLPALIFSSIANTDTLEDLLSLWFIPVFAFIIFILGLLLG   80 (385)
T ss_pred             cHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999 899999999999999999999999999999865433 2 33333222 23334444556


Q ss_pred             HHHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccCCC
Q 041574           87 SVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATVLIQTQFPG  166 (292)
Q Consensus        87 ~L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfGe~gl~l~v~ivv~q~ii~~tl~l~lle~~~ak~~i~~~~~~  166 (292)
                      +++.|++|.+.++.......++|+|++++|+|++.++||++++.++..+.+.+++++|+++..+++.++++....++.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~lglpi~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~  160 (385)
T PF03547_consen   81 FLLSRLFRLPKEWRGVFVLAASFGNTGFLGLPILQALFGERGVAYAIIFDVVNNIILWSLGYFLLESRSEKEDKSEEEPS  160 (385)
T ss_pred             HHHHHhcCCCcccceEEEecccCCcchhhHHHHHHHHhcchhhhhehHHHHhhHHHHHHHHHHhhccccccccccccccc
Confidence            66677777555442333334899999999999999999999999999999999999999999999999998888888886


Q ss_pred             ccccceeeeeeCCcccccCCCCcccccccccCCCceEEEEeccCCCCCCccccCcccCCCCCCCCCcceeeeccC
Q 041574          167 PAAASIAKFELDNDVISLDGRDPLKTESETDGNGRIRVRIRRSTSSAPDSALSSSICLTPRASNLSNAEIFSINT  241 (292)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (292)
                       .+.+..+.+.|+|..+.+++++.++|.|+++|++.|...+++.+++++...     .+|+++|.+++|.++.++
T Consensus       161 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  229 (385)
T PF03547_consen  161 -SAESIDSEQEDSDEMSLDGSSPSSTEEEIDEDGSPSSTPSQSSASAPSSVS-----TSPSPSNSTGAEQKSSNS  229 (385)
T ss_pred             -ccccccccccCCccccCCcccccccccccccCCcccccccccccccchhhc-----cCCcccccchhhhhhhhh
Confidence             788999999999999999999999999999999999988877766554433     579999999998777643

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>COG0679 Predicted permeases [General function prediction only]

Probab=99.84  E-value=3.9e-20  Score=174.92  Aligned_cols=151  Identities=21%  Similarity=0.411  Sum_probs=125.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhcCCCChhhHhHHHHHHHHHHHHHHHHHHhhcCCCCCc-hhHHHHHHHHHHHHHHHH
Q 041574            7 FYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQM-DTKFILADTLSKVLVLVL   85 (292)
Q Consensus         7 m~~vl~~IlPlfllIlLGyll~R~~~il~~~~~~~LnklV~~vaLPaLIF~sl~~~~~~~l-~~~~ila~~l~~li~~ll   85 (292)
                      |..++..++|+|++|++||+++| ++.++++.++.+|++|+|+++|||+|+++.+++.+.. +...+.+..++.++.++.
T Consensus         2 ~~~~~~~vlpi~lii~lGy~~~r-~~~~~~~~~~~ls~lv~~~~lP~LlF~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (311)
T COG0679           2 MMIVFEVVLPIFLIILLGYLLKR-FGILDEEAARGLSRLVVYVALPALLFNSIATADLSGLADLGLIVASLVATLLAFFL   80 (311)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHH-hcccCHHHHHHHHHHHHHHHhHHHHHHHHHhCCcchhhhHHHHHHHHHHHHHHHHH
Confidence            56789999999999999999999 9999999999999999999999999999999998877 677777766666666666


Q ss_pred             HHHHHH-HHhCCcchhhheeeeeeccchhhhHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 041574           86 LSVWAI-FFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATV  158 (292)
Q Consensus        86 ~~L~~r-l~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfGe~gl~l~v~ivv~q~ii~~tl~l~lle~~~ak~  158 (292)
                      .+++.+ +++++.++....+..+.|+|++|+|+|++..+|||+++.+++.+...+.+..++++.+.++..+.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~g~lg~pi~~~~~G~~gl~~~~i~~~~~~~~~~~~g~~~l~~~~~~~  154 (311)
T COG0679          81 LALIGRFLFKLDKRETVIFALASAFPNIGFLGLPVALSLFGEKGLAYAVIFLIIGLFLMFTLGVILLARSGGGT  154 (311)
T ss_pred             HHHHHHHHhccchhhHHHHHHHHHhcccchhhHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            666554 4555555433333349999999999999999999999999999999998888899988887655433

>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family

Probab=99.82  E-value=9.5e-20  Score=171.92  Aligned_cols=146  Identities=28%  Similarity=0.390  Sum_probs=111.7

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHHh-HhhcCCCChhhHhHHHHHHHHHHHHHHHHHHhhcCCCC--Cc-hhHHHHHHH
Q 041574            1 MITGNDFYKVMCAMVPLYFAMLIAYGS-VKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPY--QM-DTKFILADT   76 (292)
Q Consensus         1 mi~~~dm~~vl~~IlPlfllIlLGyll-~R~~~il~~~~~~~LnklV~~vaLPaLIF~sl~~~~~~--~l-~~~~ila~~   76 (292)
                      ||.+    .++++++|+|+++++||++ +| +|++++++.+.+|++++|+++||++|+++.+.+.+  .. ...++....
T Consensus         1 ~~~~----~~~~~ilpv~~ii~lG~~~~~r-~~~~~~~~~~~l~~~v~~i~lP~lif~~~~~~~~~~~~~~~~~~~~~~~   75 (321)
T TIGR00946         1 MITY----VILETVLPILVVILLGYILGKR-FGILDEEHASGINRFVINFALPLTIFHSISTTLADILQKSQSPVVLFLW   75 (321)
T ss_pred             CccH----HHHHHHHHHHHHHHHHHHHHHH-hCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555    4567899999999999999 78 99999999999999999999999999999987664  22 344444444


Q ss_pred             HHHHHHHHHHHHHHH-HHhCCcchhhheee-eeeccchhhhHHHHHHHhcCcch---hHHHHHHHHHHHHHHHHHHHHHH
Q 041574           77 LSKVLVLVLLSVWAI-FFKGGLDWLITLFS-VATLPNTLVMGIPLLSAMYGEFT---QSLMVQLVVLQCIIWYTLLLFLF  151 (292)
Q Consensus        77 l~~li~~ll~~L~~r-l~k~~~~~~~~l~~-ls~f~NtgfmGiPLv~alfGe~g---l~l~v~ivv~q~ii~~tl~l~ll  151 (292)
                      +..++.+++.++..| ++|++.++ ...+. .++++|++|+|+|++.++||+++   +.+++.+.+.+.+..++++.++.
T Consensus        76 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~GlPl~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (321)
T TIGR00946        76 GAFSGSYALIWLITKPLFKADYGK-LSGFLLVSALPNTAFIGYPLLLSLFGEEGAKILIAALFIDTGAVLMTIALGLFLV  154 (321)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccch-hhHHHHHhhhccceeehHHHHHHHhcccchhhhHHHHHHHhccchhHHHHHHHHh
Confidence            444555666677666 66655433 23333 38999999999999999999999   55555666677777788887765


Q ss_pred             H
Q 041574          152 E  152 (292)
Q Consensus       152 e  152 (292)
                      .
T Consensus       155 ~  155 (321)
T TIGR00946       155 S  155 (321)
T ss_pred             c
Confidence            4

>PRK09903 putative transporter YfdV; Provisional

Probab=99.80  E-value=6.2e-19  Score=166.38  Aligned_cols=142  Identities=21%  Similarity=0.338  Sum_probs=106.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHhhcCCCChhhHhHHHHHHHHHHHHHHHHHHhhcCCCCCc--hhHHHHHHHHHHHHHHHHH
Q 041574            9 KVMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQM--DTKFILADTLSKVLVLVLL   86 (292)
Q Consensus         9 ~vl~~IlPlfllIlLGyll~R~~~il~~~~~~~LnklV~~vaLPaLIF~sl~~~~~~~l--~~~~ila~~l~~li~~ll~   86 (292)
                      .++++++|+|++|++||+++| +|+++++..+.+||+++|+++||++|+++++.+.+..  ++.+.+...+..++.+++.
T Consensus         4 ~~~~~ilpif~ii~lG~~~~r-~~~~~~~~~~~ls~lv~~v~lPalif~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (314)
T PRK09903          4 FFIGDLLPIIVIMLLGYFSGR-RETFSEDQARAFNKLVLNYALPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFS   82 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence            567889999999999999999 9999999999999999999999999999998765433  3444444444445555555


Q ss_pred             HHHHH-HHhCCcchhhheee-eeeccchhhhHHHHHHHhcCcch---hHHHHHHHHHHHHHHHHHHHHHHHh
Q 041574           87 SVWAI-FFKGGLDWLITLFS-VATLPNTLVMGIPLLSAMYGEFT---QSLMVQLVVLQCIIWYTLLLFLFEY  153 (292)
Q Consensus        87 ~L~~r-l~k~~~~~~~~l~~-ls~f~NtgfmGiPLv~alfGe~g---l~l~v~ivv~q~ii~~tl~l~lle~  153 (292)
                      ++..+ ++|++.+. ..... .++++|+||+|+|+++++||+++   +.+++ +...++++.+++++++++.
T Consensus        83 ~~~~~~~~~~~~~~-~~~~~~~~~~~N~gf~G~Pl~~~~~G~~~~~~~~~a~-~~~~~~~~~~~~g~~~~~~  152 (314)
T PRK09903         83 WFGCYKFFKRTHAE-AAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGLVVAI-ISIIVNAITIPIGLYLLNP  152 (314)
T ss_pred             HHHHHHHhcCCcch-hhHhhhhhcCCCcccccHHHHHHHcCchhhhhhHHHH-HHHHHHHHHHHHHHHHHcc
Confidence            55543 44544322 12223 37889999999999999999994   43333 3445677778888888864

>KOG2722 consensus Predicted membrane protein [Function unknown]

Probab=98.66  E-value=6.5e-08  Score=93.53  Aligned_cols=111  Identities=13%  Similarity=0.122  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHhHhhc--CCCChhhHhHHHHHHHHHHHHHHHHHHhhcCC-CCCc-hhHHHHH-HHHHHHHHHHHHH
Q 041574           13 AMVPLYFAMLIAYGSVKWW--RIFTPQQCSGINRFVAVFAVPVLSFHFIAQNN-PYQM-DTKFILA-DTLSKVLVLVLLS   87 (292)
Q Consensus        13 ~IlPlfllIlLGyll~R~~--~il~~~~~~~LnklV~~vaLPaLIF~sl~~~~-~~~l-~~~~ila-~~l~~li~~ll~~   87 (292)
                      .++-++++-.+||++.+ .  ++++++..|.+|++|+++..|||+|..+++.- .+.+ +|.++-. ..+..++..+++|
T Consensus        16 pvlqvl~i~~~G~~lA~-~~~~lLp~dark~ln~Lvf~lFtPcLiFs~La~svtl~~ii~~wfiPVnv~Lt~~ig~liG~   94 (408)
T KOG2722|consen   16 PVLQVLLITLVGFLLAS-DYVNLLPRDARKLLNKLVFYLFTPCLIFSKLAQSVTLEKIIQWWFIPVNVGLTFIIGSLIGW   94 (408)
T ss_pred             cHHHHHHHHHHHHHHhc-cccCcCCHHHHHHhhheeeeeecHHHHHHHHhhhccHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            46678889999999976 5  99999999999999999999999999998653 4444 7777743 3456677777889


Q ss_pred             HHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhc
Q 041574           88 VWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMY  124 (292)
Q Consensus        88 L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alf  124 (292)
                      ++.+++|.+++......+++.++|.|.+-+-++.++-
T Consensus        95 lv~~I~rppp~~~~fiia~~a~GN~gnlpL~Lv~alc  131 (408)
T KOG2722|consen   95 LVVKILRPPPQLRGFIIACCAFGNSGNLPLILVPALC  131 (408)
T ss_pred             HHhheecCChhhcCeEEEEeecCCcCCcHHHHhHHHh
Confidence            9999888555432445556999999999999999984

>TIGR00841 bass bile acid transporter

Probab=97.16  E-value=0.011  Score=55.71  Aligned_cols=137  Identities=9%  Similarity=-0.007  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhcCCCChhh--HhHHHHHHHHHHHHHHHHHHhhcCC--CCCchhHHHHHHHHHHHH
Q 041574            6 DFYKVMCAMVPLYFAMLIAYGSVKWWRIFTPQQ--CSGINRFVAVFAVPVLSFHFIAQNN--PYQMDTKFILADTLSKVL   81 (292)
Q Consensus         6 dm~~vl~~IlPlfllIlLGyll~R~~~il~~~~--~~~LnklV~~vaLPaLIF~sl~~~~--~~~l~~~~ila~~l~~li   81 (292)
                      |+..++..++-+++=+++|.+++||++.+.+..  .+.++.+.+.    ++++..+..+.  .....+..+.+..+..++
T Consensus       132 ~~~~i~~~~~~v~vPl~lG~~~r~~~p~~~~~~~~~~~~s~~~l~----liv~~~~~~~~~~i~~~~~~~~~~~~ll~~~  207 (286)
T TIGR00841       132 PYLGIGLSLVAVLIPVSIGMLVKHKLPQIAKIILKVGLISVFLLS----VIIAVVGGINVENLATIGPLLLLVGILLPLA  207 (286)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCchHHHHHHH----HHHHHHHHhhHHHHHHhhHHHHHHHHHHHHH
Confidence            444454446677788899999998553322211  1122222222    22232222211  111123333444444556


Q ss_pred             HHHHHHHHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHH
Q 041574           82 VLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQSLMVQLVVLQCIIWYTLL  147 (292)
Q Consensus        82 ~~ll~~L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfGe~gl~l~v~ivv~q~ii~~tl~  147 (292)
                      .++++++++|.+|.+.++..++-..++..|++ +|++++...|+++.....+.+.+.+.+....+.
T Consensus       208 ~~~~g~~~a~~~~l~~~~~~t~~~~~g~qN~~-lal~la~~~f~~~~a~~~~~~~v~~~~~~~~~a  272 (286)
T TIGR00841       208 GFLLGYLLAKLAGLPWARCRTISIEVGMQNSQ-LCSTIAQLSFSPEVAVPSAIFPLIYALFQLAFA  272 (286)
T ss_pred             HHHHHHHHHHHhCCCHhhheeeeeeeecccHH-HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence            66777888888875442223332237778998 999999999986554444444445554443333

Functionally characterized members of the BASS family catalyze Na+:bile acid symport. These systems have been identified in intestinal, liver and kidney tissues of animals. These symporters exhibit broad specificity, taking up a variety of non bile organic compounds as well as taurocholate and other bile salts. Functionally uncharacterised homologues are found in plants, yeast, archaea and bacteria.

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)

Probab=94.54  E-value=1.2  Score=42.63  Aligned_cols=113  Identities=12%  Similarity=0.168  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHhHhhcCCCChhhHhHHHHHHHHHHHHHHHHHHhhcC---C-CCCchhHHHHHH-HHHH---HHHHH
Q 041574           13 AMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQN---N-PYQMDTKFILAD-TLSK---VLVLV   84 (292)
Q Consensus        13 ~IlPlfllIlLGyll~R~~~il~~~~~~~LnklV~~vaLPaLIF~sl~~~---~-~~~l~~~~ila~-~l~~---li~~l   84 (292)
                      ..+-+++=+++|.+++||.+-..+. .+..-+.+-..++-.+++.++.+.   + ..+.+...++.. .+..   ++.+.
T Consensus       163 L~~~vllP~~~Gq~~r~~~~~~~~~-~~~~~~~~~~~~ll~iv~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  241 (313)
T PF13593_consen  163 LVLTVLLPLVLGQLLRRWVPKWVAR-HKKPLSLLSQLALLLIVYSAFSSAFAQGAWHSVSAAALALIVAVSLLLLLVVLV  241 (313)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            3444555567788888764422222 244455556667777777766554   1 112222222221 1111   12222


Q ss_pred             HHHHHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhcCcc
Q 041574           85 LLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEF  127 (292)
Q Consensus        85 l~~L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfGe~  127 (292)
                      +.+...|.++-++++..++.. ++--.+.-+|+|++..+|++.
T Consensus       242 ~~~~~~r~~~~~~~d~iA~~F-~gs~Ksl~~gvpl~~~lf~~~  283 (313)
T PF13593_consen  242 LGWLAARLLGFSRPDRIAVLF-CGSQKSLALGVPLASILFPGH  283 (313)
T ss_pred             HHHHHHhhcCCChhhEEEEEE-EcCcCcchhHHHHHHHHcccc
Confidence            445566776644422133332 444688899999999999875

>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]

Probab=92.41  E-value=3.5  Score=40.26  Aligned_cols=122  Identities=15%  Similarity=0.066  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhcCCCChhhHhHHHHHHHHHHHHHHHHHHhh--cCCCCCc--hhHHHH----HHHHHHHH
Q 041574           10 VMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIA--QNNPYQM--DTKFIL----ADTLSKVL   81 (292)
Q Consensus        10 vl~~IlPlfllIlLGyll~R~~~il~~~~~~~LnklV~~vaLPaLIF~sl~--~~~~~~l--~~~~il----a~~l~~li   81 (292)
                      ++...+|+.+-++.=|++.||+|.  +...+.+-..+--+++++|++.-+.  ..+-+..  ++.-++    ...+...+
T Consensus       182 ~lyl~iPli~G~lTR~i~~k~kg~--~~~~~~f~p~ispi~ligLl~TivliF~~qg~~Iv~~p~~i~liAIpl~iy~~~  259 (342)
T COG0798         182 LLYLGIPLIAGVLTRYILIKKKGR--EWYESRFLPKISPIALIGLLLTIVLIFAFQGEQIVEQPLDILLIAIPLLIYFLL  259 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHhhcChHHHHHHHHHHHHHHHHhHHHHHhChHHHHHHHHHHHHHHHH
Confidence            344566776666666777774441  2233444444445666776665331  1111111  221111    22234445


Q ss_pred             HHHHHHHHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhcC-cchhHHHHH
Q 041574           82 VLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYG-EFTQSLMVQ  134 (292)
Q Consensus        82 ~~ll~~L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfG-e~gl~l~v~  134 (292)
                      ++.+.+++.|..+-+.+. ..-.++++-+|+-=+.++++.++|| +.+.+.+..
T Consensus       260 ~~~i~~~i~k~lgl~y~~-~~~~~ft~aSNnfeLAiAvAi~lfG~~s~aA~a~v  312 (342)
T COG0798         260 MFFISYFIAKALGLPYED-AAALVFTGASNNFELAIAVAIALFGLTSGAALATV  312 (342)
T ss_pred             HHHHHHHHHHHhCCChhh-hhceeeeeccccHHHHHHHHHHhcCccccchhhhh
Confidence            555666667777744433 2333346778999999999999999 555444433

>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species

Probab=92.36  E-value=2.6  Score=41.58  Aligned_cols=73  Identities=12%  Similarity=0.147  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhcCCCChhhHhHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHHHHHHHHH
Q 041574           10 VMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINRFVAVFAVPVLSFHFIAQNNPYQM---DTKFILADTLSKVLVL   83 (292)
Q Consensus        10 vl~~IlPlfllIlLGyll~R~~~il~~~~~~~LnklV~~vaLPaLIF~sl~~~~~~~l---~~~~ila~~l~~li~~   83 (292)
                      ++..+-|+.+++++|.++.- .|+++.+..+.+-+.+..+.+|+.++.-+.+.|....   ..+.++++.++.+.+.
T Consensus        21 ~f~~l~~~vl~~~~~~~lsn-lgli~~p~~s~~y~~v~~~~vPlai~LlLl~~Dlr~i~~~g~~~l~~F~~~~~g~v   96 (378)
T PF05684_consen   21 FFKYLPGAVLCYLLGMLLSN-LGLIDSPASSPVYDFVWTYLVPLAIPLLLLSADLRRILRLGGRLLLAFLIGAVGTV   96 (378)
T ss_pred             hHhhcCHHHHHHHHHHHHHH-CCCcCCCCcchHHHHHHHHHHHHHHHHHHHHccHHHHHHhhHHHHHHHHHHHHHHH
Confidence            34566678899999999998 9999656667788999999999999999988888765   4566666665544433

>TIGR00832 acr3 arsenical-resistance protein

Probab=90.42  E-value=1.6  Score=42.10  Aligned_cols=52  Identities=10%  Similarity=-0.004  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHHHHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhcCcchh
Q 041574           77 LSKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQ  129 (292)
Q Consensus        77 l~~li~~ll~~L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfGe~gl  129 (292)
                      +-.++.+.+.++.+|.+|.+.+...++....+..|. -+|++++...||+.+.
T Consensus       254 l~~~~~~~lg~~~~r~~~l~~~~~~a~~~e~g~qN~-~lai~lA~~~f~~~~~  305 (328)
T TIGR00832       254 IYFYIMFFLTFALAKKLGLPYSITAPAAFTGASNNF-ELAIAVAISLFGLNSG  305 (328)
T ss_pred             HHHHHHHHHHHHHHHHhCcChhhhhhheehhhhhhH-HHHHHHHHHhCCCCcc
Confidence            334455566777788887444332333222454555 7999999999987543

The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport.

>COG0385 Predicted Na+-dependent transporter [General function prediction only]

Probab=87.31  E-value=19  Score=34.96  Aligned_cols=111  Identities=14%  Similarity=0.149  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhcCCCChhhHhHHHH---HHHHHHHHHHHHHHhhcCCCCCchhHHH--HHHHHHHHHHHH
Q 041574           10 VMCAMVPLYFAMLIAYGSVKWWRIFTPQQCSGINR---FVAVFAVPVLSFHFIAQNNPYQMDTKFI--LADTLSKVLVLV   84 (292)
Q Consensus        10 vl~~IlPlfllIlLGyll~R~~~il~~~~~~~Lnk---lV~~vaLPaLIF~sl~~~~~~~l~~~~i--la~~l~~li~~l   84 (292)
                      +.+.++.+++=+.+|-++++|.+    +..+...+   .+-..++=+.++...+..........+.  ++..+-.++.++
T Consensus       163 ~~~i~~~vllP~~LG~~~r~~~~----~~~~~~~~~l~~vs~~~illIv~~~~s~~~~~~~~~~~~v~~~v~~~n~lg~~  238 (319)
T COG0385         163 FLSILLQVLLPFVLGQLLRPLLP----KWVERLKKALPPVSVLSILLIVYAAFSAAVENGIWSGLLIFVAVILHNLLGLL  238 (319)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhhcchhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence            33445556666777888877433    22333332   2333344444444444332222222222  233333445556


Q ss_pred             HHHHHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhcC
Q 041574           85 LLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYG  125 (292)
Q Consensus        85 l~~L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfG  125 (292)
                      +.+...|++|.+.+...++....+--|. =.|.|+...-+|
T Consensus       239 ~gy~~ar~~g~~~a~~iti~ie~g~qn~-~lg~alA~~f~~  278 (319)
T COG0385         239 LGYFGARLLGFDKADEITIAIEGGMQNL-GLGAALAAAFFG  278 (319)
T ss_pred             HHHHHHHHhCCChhheeeEEEeeccccH-HHHHHHHHhcCC
Confidence            6777788888554222344333555566 689999999444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	292
3zux_A	332	Transporter, ASBTNM; transport protein, membrane p	95.57

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*

Probab=95.57  E-value=0.17  Score=47.33  Aligned_cols=64  Identities=14%  Similarity=-0.034  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHhCCcchhhheeeeeeccchhhhHHHHHHHhcCcchh--HHHHHHHHHHHHH
Q 041574           78 SKVLVLVLLSVWAIFFKGGLDWLITLFSVATLPNTLVMGIPLLSAMYGEFTQ--SLMVQLVVLQCII  142 (292)
Q Consensus        78 ~~li~~ll~~L~~rl~k~~~~~~~~l~~ls~f~NtgfmGiPLv~alfGe~gl--~l~v~ivv~q~ii  142 (292)
                      ..++.+++.+..+|++|.+.+...++..-++-.|+ -+|+|++...||+...  ...+.+.+.|.+.
T Consensus       237 ~~~~~~~lg~~~~r~~~~~~~~~~ti~~e~G~qNs-~lai~lA~~~F~~~p~~alp~~iy~~~q~i~  302 (332)
T 3zux_A          237 HNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNS-GLAAALAAAHFAAAPVVAVPGALFSVWHNIS  302 (332)
T ss_dssp             HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCCCH-HHHHHHHHHHSTTCGGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCHhHhhhhhhhhhhccH-HHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence            33455556677778877555332332211566787 5999999999964332  2223344444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00