Citrus Sinensis ID: 041651

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------
MLINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME
cEEEHHHHHHHHHHHHHHcEEcccccccccccccccccEEEEccccccccEEEEEEcccccEEEEEcccccccccccccccEEccccccccccccccEEEEEEcccccEEEccccccccccccEEcccccEEEEccccccccEEEEEEEcccccccEEEccccccccccEEEEEEcccccEEEEcccccccccccccccccccccccccccccHHcccccccccccEEEEcccccEEEEEcccEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccEEEEEccccccccccccccEEEEcccccEEEEEcccccccEEcccccccEEcEEEEcccccEEEEEcccccccccccccccccccEEEEccccccccEEEccccccccccccEEEEEccEEEEEEccccccccccccccccccEEEEEEEcccccccccccccEEEccccEEEcccEEEEEEEEEEcccccEEEEEEEccccccccccccccEEEEEEEEEEEccccEEEEEEEccccccccccccEEEEEEcccccccEEEEEEc
cHHHHHHHHHHHHHHHHHHHHHccccHccccccHcccccEEEEcccccccHEEEEEccccEEEEEEccccccccccccccccccccHHHccccccEEEEEEEccccccEEEcccccccEcccccEccccEEEEEccccccccEEEEEcccccccccEEEccccHcccccccccEEcccccEEEEEcccccccccccccccccccccccccccHHccccccccccccEEEEcccccEEEEEcccEEEEEccccEEEEEcccccccccccccccccEEEccccccccccccccEEEEEccccccccccccccccccccccccEEEccccccccEEcccccccccccEEEcccccEEEEEccccccccccccccccccEEEEcccccccccEEcccccccccEEccEEEEccccEEEEEcccccccccccccccccEEEEEEEccccccccccccccEEEEccccEEcccEEEEEEEEccccccccEEEEEEccccEEcccccccEEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccccccEEEEEEc
MLINFLCIKCLFLQLSFhfifvplipsqvlppyagsqgewnLLHESIGISAMHMQLLHDnrvimfdrtdfgqsnlslssgrcrfdpydtvlhtdctaHSILYDVatnayrplmvqtdtwcssgsvlpngtlvqsggyndgdhvvrtftpcdddqcdwielpqhLSERRWYAtnqilpdgriiiiggrrqfnyefypksdedlsfpqtFMLHFLLETRdyaennlypfvhllpdgnlfifANTRSILFdykqnkvlkeypeipgadprnypstgssvllplderngstsVQAEIMICGGAQNASFALATQGVFIRAISTCGRlvvshanpswvmeemplprvmgdmillpngdviIINGAqlgtagwelargpmtrpiiyrpseqtsrrfsvmepstrprmyhssailltdgrvliggsnphiyynftnvvyptdlsleaysppylsaeyatvrpkilslnetigykatFQVRFSVEEYLSAGVVSVrliapsftthsfgmnQRMVVLKILEVSHVTSYVYHLAavapstaeiappgyYLLFVVHAeipssgmwvkme
MLINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYpeipgadprnypSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTrpiiyrpseqtsrrfsvmepstrprmyHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSftthsfgmnQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSsgmwvkme
MLINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDgriiiiggrrQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME
*LINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYP*****************************VQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIY*********************YHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMW****
MLINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME
MLINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME
MLINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME
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iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLINFLCIKCLFLQLSFHFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query557 2.2.26 [Sep-21-2011]
P0CS93680 Galactose oxidase OS=Gibb no no 0.712 0.583 0.246 9e-15
I1S2N3680 Galactose oxidase OS=Gibb no no 0.712 0.583 0.244 2e-14
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1 Back     alignment and function desciption
 Score = 82.4 bits (202), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 184/450 (40%), Gaps = 53/450 (11%)

Query: 113 MVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYAT 172
           + + D +C   S+  NG +V +GG ND     +  +  D     WI  P  +   R Y +
Sbjct: 262 VTKHDMFCPGISMDGNGQIVVTGG-ND----AKKTSLYDSSSDSWIPGPD-MQVARGYQS 315

Query: 173 NQILPDGRIIIIGGRR-----QFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP 226
           +  + DGR+  IGG       + N E Y P S    S P   +   L   +      LY 
Sbjct: 316 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ----GLY- 370

Query: 227 FVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGS 286
                 D + ++F   +  +F    +  +  Y      D ++     S+  +  D   G+
Sbjct: 371 ----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 426

Query: 287 T----SVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVM 342
                +V+ +I+  GG+ +   + AT    I  +   G    +  N  +    +   R  
Sbjct: 427 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTF 482

Query: 343 GDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYH 402
              ++LP+G   I  G + G   +E +  P+  P IY P + T   F    P++  R+YH
Sbjct: 483 HTSVVLPDGSTFITGGQRRGIP-FEDST-PVFTPEIYVPEQDT---FYKQNPNSIVRVYH 537

Query: 403 SSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYL--SAEYATVRPKILSLN 460
           S ++LL DGRV  GG                    + ++P YL  S      RPKI +  
Sbjct: 538 SISLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKI-TRT 590

Query: 461 ETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVY 520
            T   K   ++  S +  +S       LI     TH+   +QR + L  L  +   SY +
Sbjct: 591 STQSVKVGGRITISTDSSIS----KASLIRYGTATHTVNTDQRRIPL-TLTNNGGNSYSF 645

Query: 521 HLAAVAPSTAEIAPPGYYLLFVVH-AEIPS 549
            +    PS + +A PGY++LFV++ A +PS
Sbjct: 646 QV----PSDSGVALPGYWMLFVMNSAGVPS 671
Catalyzes the sterospecific oxidation of primary alcohols to the corresponding aldehydes. The biologically relevant substrate of the enzyme is not known as the enzyme exhibits broad substrate specificity from small alcohols through sugars to oligo- and polysaccharides.
Gibberella zeae (taxid: 5518)
EC: 1EC: .EC: 1EC: .EC: 3EC: .EC: 9
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query557
224125548529 predicted protein [Populus trichocarpa] 0.944 0.994 0.664 0.0
357512197570 Galactose oxidase [Medicago truncatula] 0.931 0.910 0.664 0.0
356571163552 PREDICTED: galactose oxidase-like [Glyci 0.960 0.969 0.633 0.0
224130768501 predicted protein [Populus trichocarpa] 0.897 0.998 0.686 0.0
255542400533 Galactose oxidase precursor, putative [R 0.926 0.968 0.639 0.0
297817088547 hypothetical protein ARALYDRAFT_907231 [ 0.924 0.941 0.635 0.0
15230360547 glyoxal oxidase-related protein [Arabido 0.924 0.941 0.635 0.0
359487915528 PREDICTED: galactose oxidase [Vitis vini 0.938 0.990 0.608 0.0
225424897 874 PREDICTED: uncharacterized protein LOC10 0.944 0.601 0.587 0.0
225458077553 PREDICTED: galactose oxidase-like [Vitis 0.965 0.972 0.572 0.0
>gi|224125548|ref|XP_002319613.1| predicted protein [Populus trichocarpa] gi|222857989|gb|EEE95536.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/533 (66%), Positives = 432/533 (81%), Gaps = 7/533 (1%)

Query: 27  SQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDP 86
           +Q +P   GSQG W LLH ++GISAMHMQL+HDN+V++FDRTDFG SN+SL  GRCR DP
Sbjct: 2   TQTIPSSDGSQGRWRLLHANVGISAMHMQLMHDNKVVIFDRTDFGPSNISLPGGRCRIDP 61

Query: 87  YDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRT 146
            D  L  DCTAHSILYD+ T+ YRPLMVQTDTWCSSG+VLPNGTLVQ+GG++DGD+V R 
Sbjct: 62  SDEALKIDCTAHSILYDIITDTYRPLMVQTDTWCSSGAVLPNGTLVQTGGFHDGDNVTRM 121

Query: 147 FTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQ 206
           +T C DD CDW+E P +LS RRWYATNQILPDGRIIIIGGRR+F+YEF+P+        Q
Sbjct: 122 YTSCPDDICDWVEYPNYLSRRRWYATNQILPDGRIIIIGGRREFSYEFFPRPSPRR---Q 178

Query: 207 TFMLHFLLETRD-YAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGAD 265
           TF L  L+ETR+   ENNLYP+VHL PDGNLFIFANTRSILFDY QN+V++E+P IPG D
Sbjct: 179 TFQLRLLIETREGNVENNLYPYVHLFPDGNLFIFANTRSILFDYNQNRVVREFPRIPGGD 238

Query: 266 PRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVS 325
           PRNYPSTGSSVLLPLDE     S+  E+++CGGA   ++  A +G ++RAISTCGRL ++
Sbjct: 239 PRNYPSTGSSVLLPLDE--NEHSIDPEVLVCGGAPRGAYQQALRGTYVRAISTCGRLRIT 296

Query: 326 HANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQT 385
             N SWVM+ MP+PRVMGDM+LLP GDVIIING Q GTAGWEL R   TRP++Y PS  +
Sbjct: 297 DQNASWVMDTMPIPRVMGDMLLLPTGDVIIINGGQSGTAGWELGRQAATRPVMYHPSNPS 356

Query: 386 SRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYL 445
            +RFSVMEPS RPRMYHS+AILLTDGRVL+GG NPHIYYNF++V YPTDLSLE +SPPYL
Sbjct: 357 DQRFSVMEPSPRPRMYHSAAILLTDGRVLVGGGNPHIYYNFSDVFYPTDLSLETFSPPYL 416

Query: 446 SAEYATVRPKILSLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMV 505
           S +YA++RP ILS+++T+     F + FSV EY++  V+SVR++APSFTTHS+ MNQRMV
Sbjct: 417 STQYASIRPVILSVDDTVSPGQRFLLSFSVGEYIAGSVLSVRIVAPSFTTHSYSMNQRMV 476

Query: 506 VLKILE-VSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME 557
           VL+I E + + TS  Y L+ V PS+AEIAPPGYYLL+VVH+ IPSSG+WV+++
Sbjct: 477 VLRIDEIIDNETSSSYTLSVVGPSSAEIAPPGYYLLYVVHSGIPSSGVWVRLQ 529

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357512197|ref|XP_003626387.1| Galactose oxidase [Medicago truncatula] gi|355501402|gb|AES82605.1| Galactose oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356571163|ref|XP_003553749.1| PREDICTED: galactose oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|224130768|ref|XP_002328372.1| predicted protein [Populus trichocarpa] gi|222838087|gb|EEE76452.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255542400|ref|XP_002512263.1| Galactose oxidase precursor, putative [Ricinus communis] gi|223548224|gb|EEF49715.1| Galactose oxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297817088|ref|XP_002876427.1| hypothetical protein ARALYDRAFT_907231 [Arabidopsis lyrata subsp. lyrata] gi|297322265|gb|EFH52686.1| hypothetical protein ARALYDRAFT_907231 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15230360|ref|NP_191321.1| glyoxal oxidase-related protein [Arabidopsis thaliana] gi|4678285|emb|CAB41193.1| putative protein [Arabidopsis thaliana] gi|332646158|gb|AEE79679.1| glyoxal oxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359487915|ref|XP_002271784.2| PREDICTED: galactose oxidase [Vitis vinifera] Back     alignment and taxonomy information
>gi|225424897|ref|XP_002269734.1| PREDICTED: uncharacterized protein LOC100253553 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225458077|ref|XP_002280559.1| PREDICTED: galactose oxidase-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query557
TAIR|locus:2076696547 AT3G57620 "AT3G57620" [Arabido 0.922 0.939 0.625 1.3e-180
TAIR|locus:2035408548 AT1G19900 "AT1G19900" [Arabido 0.929 0.945 0.526 2e-152
TAIR|locus:2005664547 AT1G75620 "AT1G75620" [Arabido 0.921 0.937 0.522 2.3e-151
TAIR|locus:2084480545 AT3G53950 "AT3G53950" [Arabido 0.903 0.922 0.446 4.7e-119
TAIR|locus:2180791594 AT5G19580 "AT5G19580" [Arabido 0.915 0.858 0.423 2.2e-112
TAIR|locus:2019564615 GLOX1 "AT1G67290" [Arabidopsis 0.913 0.827 0.432 1.1e-110
UNIPROTKB|G4MQZ0669 MGG_02368 "Galactose oxidase" 0.457 0.381 0.235 1.6e-06
TAIR|locus:2076696 AT3G57620 "AT3G57620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1753 (622.1 bits), Expect = 1.3e-180, P = 1.3e-180
 Identities = 332/531 (62%), Positives = 408/531 (76%)

Query:    32 PYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVL 91
             P+      W +L  SIGISAMHMQLLH+  VIMFDRTDFG SN+SL  G CR+DP DT  
Sbjct:    29 PFLLQLDRWEMLLPSIGISAMHMQLLHNGMVIMFDRTDFGTSNVSLPGGICRYDPTDTAE 88

Query:    92 HTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCD 151
               DC+AHS+LYDV +N YRPL VQTDTWCSSG+VLPNGTLVQ+GGYNDG+   R F+PC 
Sbjct:    89 KFDCSAHSVLYDVVSNTYRPLNVQTDTWCSSGAVLPNGTLVQTGGYNDGERAARMFSPCG 148

Query:   152 -DDQCDWIELPQHLSERRWYATNQILPDXXXXXXXXXXQFNYEFYPKSDEDLSFPQTFML 210
               D CDWIE PQ+LS+RRWYATNQILPD          QFNYE +P+ D   S  ++  L
Sbjct:   149 YSDTCDWIEFPQYLSQRRWYATNQILPDGRIIVVGGRRQFNYELFPRHD---SRSRSSRL 205

Query:   211 HFLLETRDYA-ENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNY 269
              FL ET D + ENNLYPF+HLLPDGNLF+FANTRSI+FDYK+N+++KE+PEIPG DPRNY
Sbjct:   206 EFLRETSDGSNENNLYPFIHLLPDGNLFVFANTRSIVFDYKKNRIVKEFPEIPGGDPRNY 265

Query:   270 PSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANP 329
             PS+GSS+L PLD+ N + +V+ EIM+CGG+    F+   +G F RA STCGRL +S  +P
Sbjct:   266 PSSGSSILFPLDDTNDA-NVEVEIMVCGGSPKGGFS---RG-FTRATSTCGRLKLSDQSP 320

Query:   330 SWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRF 389
             SW ME MPLPRVMGDM+LLP GDVII+NGA  GTAGWE AR P+ +P+IY+P +     F
Sbjct:   321 SWEMETMPLPRVMGDMLLLPTGDVIIVNGAGAGTAGWEKARDPIIQPVIYQPFDHL---F 377

Query:   390 SVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAEY 449
             +VM   +RPRMYHSSAILL DGRVL+GGSNPH+YYNFTNV YPTDLSLEAYSPPYL    
Sbjct:   378 TVMSTPSRPRMYHSSAILLPDGRVLVGGSNPHVYYNFTNVEYPTDLSLEAYSPPYLFFTS 437

Query:   450 ATVRPKIL-SLNETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLK 508
               +RPKIL + ++ + YK  F V FS+ ++L+  ++SVR++APSFTTHSF MNQRMV+LK
Sbjct:   438 DPIRPKILLTSDKVLSYKRLFNVDFSIAQFLTVDLLSVRIVAPSFTTHSFAMNQRMVILK 497

Query:   509 ILEVSH--VTSYVYHLAAVAPSTAEIAPPGYYLLFVVHAEIPSSGMWVKME 557
             +L V+   +T+  Y ++A+ PSTAEIAPPGYY++F+VHA IPSS  WV++E
Sbjct:   498 LLSVTRDQLTNS-YRVSALGPSTAEIAPPGYYMIFLVHAGIPSSAAWVQIE 547
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2035408 AT1G19900 "AT1G19900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005664 AT1G75620 "AT1G75620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084480 AT3G53950 "AT3G53950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180791 AT5G19580 "AT5G19580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019564 GLOX1 "AT1G67290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MQZ0 MGG_02368 "Galactose oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query557
pfam07250243 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-termi 1e-142
cd02851103 cd02851, E_set_GO_C, C-terminal Early set domain a 1e-29
pfam0911897 pfam09118, DUF1929, Domain of unknown function (DU 1e-27
>gnl|CDD|219349 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-terminus Back     alignment and domain information 
 Score =  411 bits (1058), Expect = e-142
 Identities = 169/248 (68%), Positives = 199/248 (80%), Gaps = 6/248 (2%)

Query: 52  MHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRP 111
           MHMQLLH+N+VIMFDRT+FG SN+SL  GRCR DP D  L  DC+AHS+LYDVATN  RP
Sbjct: 1   MHMQLLHNNKVIMFDRTNFGPSNISLPPGRCRPDPGDAPLKIDCSAHSVLYDVATNTIRP 60

Query: 112 LMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCD-DDQCDWIELPQHLSERRWY 170
           L VQTDTWCSSG++L +GTLVQ+GG  DG+  VR F+PCD +D CDWIE P  L+ RRWY
Sbjct: 61  LTVQTDTWCSSGALLSDGTLVQTGGDGDGERKVRYFSPCDSNDTCDWIEFPATLAARRWY 120

Query: 171 ATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHL 230
           ATNQILPDG  IIIGGRR FNYEF+PK  ++   P+   L FL ET D  ENNLYPFV L
Sbjct: 121 ATNQILPDGSFIIIGGRRAFNYEFFPKKGQN---PRASALRFLRETEDSQENNLYPFVFL 177

Query: 231 LPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGSTSVQ 290
           LPDGNLFIFAN RSILFDY++N V+KE+P+IPG  PRNYPS+GSSVLLPLD+RN   ++ 
Sbjct: 178 LPDGNLFIFANNRSILFDYRKNTVVKEFPQIPGG-PRNYPSSGSSVLLPLDDRNP-DNLT 235

Query: 291 AEIMICGG 298
           AE+++CGG
Sbjct: 236 AEVLVCGG 243

This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. Length = 243
>gnl|CDD|199882 cd02851, E_set_GO_C, C-terminal Early set domain associated with the catalytic domain of galactose oxidase Back     alignment and domain information
>gnl|CDD|220118 pfam09118, DUF1929, Domain of unknown function (DUF1929) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 557
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
cd02851101 Galactose_oxidase_C_term Galactose oxidase C-termi 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PF0911898 DUF1929: Domain of unknown function (DUF1929); Int 99.98
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.97
PLN02153341 epithiospecifier protein 99.96
PHA02790480 Kelch-like protein; Provisional 99.96
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.96
PHA02790480 Kelch-like protein; Provisional 99.96
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.95
PHA03098534 kelch-like protein; Provisional 99.95
PLN02193470 nitrile-specifier protein 99.94
PHA03098534 kelch-like protein; Provisional 99.94
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.94
PLN02153341 epithiospecifier protein 99.92
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.92
PLN02193470 nitrile-specifier protein 99.92
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.91
KOG4693392 consensus Uncharacterized conserved protein, conta 99.79
KOG4693392 consensus Uncharacterized conserved protein, conta 99.71
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.58
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.43
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.3
KOG1230521 consensus Protein containing repeated kelch motifs 99.2
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.15
KOG1230521 consensus Protein containing repeated kelch motifs 99.14
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 99.1
COG3055381 Uncharacterized protein conserved in bacteria [Fun 98.88
COG3055381 Uncharacterized protein conserved in bacteria [Fun 98.86
PF1396450 Kelch_6: Kelch motif 98.78
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.39
PF1396450 Kelch_6: Kelch motif 98.36
smart0061247 Kelch Kelch domain. 98.36
smart0061247 Kelch Kelch domain. 98.15
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 98.02
PF1341549 Kelch_3: Galactose oxidase, central domain 97.95
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.92
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 97.71
PF1341549 Kelch_3: Galactose oxidase, central domain 97.7
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 97.61
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.27
KOG0286343 consensus G-protein beta subunit [General function 97.23
PLN02772 398 guanylate kinase 96.96
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 96.85
PRK13684334 Ycf48-like protein; Provisional 96.62
PLN02772398 guanylate kinase 96.45
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 96.09
PRK11028330 6-phosphogluconolactonase; Provisional 95.64
PF1385442 Kelch_5: Kelch motif 95.57
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 95.49
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 95.37
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 95.31
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 95.11
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 94.9
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 94.86
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 94.79
KOG0310487 consensus Conserved WD40 repeat-containing protein 94.68
KOG0315311 consensus G-protein beta subunit-like protein (con 94.55
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 93.69
PRK11028330 6-phosphogluconolactonase; Provisional 93.59
PF1385442 Kelch_5: Kelch motif 93.16
KOG0310487 consensus Conserved WD40 repeat-containing protein 93.09
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 92.94
PF14870302 PSII_BNR: Photosynthesis system II assembly factor 92.77
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 92.45
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 91.6
PLN00181793 protein SPA1-RELATED; Provisional 91.42
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 91.4
PRK13684334 Ycf48-like protein; Provisional 90.89
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 90.5
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 90.4
KOG0315311 consensus G-protein beta subunit-like protein (con 90.37
KOG2437723 consensus Muskelin [Signal transduction mechanisms 90.27
KOG2437723 consensus Muskelin [Signal transduction mechanisms 89.88
PF12768281 Rax2: Cortical protein marker for cell polarity 89.84
KOG0286343 consensus G-protein beta subunit [General function 89.27
KOG0266456 consensus WD40 repeat-containing protein [General 87.67
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 85.83
PTZ00421493 coronin; Provisional 85.31
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 85.31
PF13088275 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 81.5
KOG0291 893 consensus WD40-repeat-containing subunit of the 18 81.22
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 81.14
PTZ00421493 coronin; Provisional 80.13
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information 
Probab=100.00  E-value=1.2e-46  Score=366.60  Aligned_cols=239  Identities=57%  Similarity=1.080  Sum_probs=217.0

Q ss_pred             eEEEEeeCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEECccCCCcccccCeecCCCcE
Q 041651           52 MHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPLMVQTDTWCSSGSVLPNGTL  131 (557)
Q Consensus        52 ~h~~~~~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~i  131 (557)
                      ||++|++++||+++++++.|.+++.+|+|+||..+.|.+.++||++++.+||+.|++++++...++.||+++++|+||++
T Consensus         1 mh~~~~~~~~v~~~d~t~~g~s~~~~~~~~c~~~~~~~~~~~d~~a~s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~l   80 (243)
T PF07250_consen    1 MHMALLHNNKVIMFDRTNFGPSNISLPDGRCRDNPEDNALKFDGPAHSVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRL   80 (243)
T ss_pred             CeEeEccCCEEEEEeCCCcccccccCCCCccccCccccccccCceEEEEEEecCCCcEEeccCCCCCcccCcCCCCCCCE
Confidence            79999999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             EEEcCCCCCCCeEEEEcCCC-CCCCceecCCcccccccCcceEEEecCCcEEEEcCcCCCceeEecCCCCCCCCCceeee
Q 041651          132 VQSGGYNDGDHVVRTFTPCD-DDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFNYEFYPKSDEDLSFPQTFML  210 (557)
Q Consensus       132 ~v~GG~~~g~~~v~~ydp~~-~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~~~~E~yP~~~~~~~~~~w~~~  210 (557)
                      +++||+.+|.+.++.|+|++ +++++|.+.++.|..+|||+++++|+||+|+|+||+...++|+||+...   ......+
T Consensus        81 l~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~---~~~~~~~  157 (243)
T PF07250_consen   81 LQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGP---GPGPVTL  157 (243)
T ss_pred             EEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccC---CCCceee
Confidence            99999988999999999985 3468999987669999999999999999999999999999999976211   1233345


Q ss_pred             cccccccccccCCccceEEEeeCCcEEEEEcCceEEEeCCCCeEEEEecCCCCCCCCccCCCCceEeecC--c-CCCCCc
Q 041651          211 HFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPL--D-ERNGST  287 (557)
Q Consensus       211 ~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~~~~~yDp~t~~W~~~~p~lp~~~~r~~~~~g~~vllp~--~-~~~~~~  287 (557)
                      +++..+.+..+.++||+++++|||+||+++++.+++||++++++.+.+|.||++ .|.||.+|++||||+  . +++|  
T Consensus       158 ~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~n~v~~~lP~lPg~-~R~YP~sgssvmLPl~~~~~~~~--  234 (243)
T PF07250_consen  158 PFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIYDYKTNTVVRTLPDLPGG-PRNYPASGSSVMLPLTDTPPNNY--  234 (243)
T ss_pred             ecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEEeCCCCeEEeeCCCCCCC-ceecCCCcceEEecCccCCCCCC--
Confidence            666666666789999999999999999999999999999999997789999988 899999999999999  5 6777  


Q ss_pred             ccccEEEEEcC
Q 041651          288 SVQAEIMICGG  298 (557)
Q Consensus       288 ~~~g~I~v~GG  298 (557)
                        ..+|+||||
T Consensus       235 --~~evlvCGG  243 (243)
T PF07250_consen  235 --TAEVLVCGG  243 (243)
T ss_pred             --CeEEEEeCC
Confidence              899999998

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>cd02851 Galactose_oxidase_C_term Galactose oxidase C-terminus domain Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PF09118 DUF1929: Domain of unknown function (DUF1929); InterPro: IPR015202 This domain adopts a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>PLN00181 protein SPA1-RELATED; Provisional Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>PF12768 Rax2: Cortical protein marker for cell polarity Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only] Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PTZ00421 coronin; Provisional Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A Back     alignment and domain information
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>PTZ00421 coronin; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query557
1t2x_A639 Glactose Oxidase C383s Mutant Identified By Directe 1e-11
2eib_A639 Crystal Structure Of Galactose Oxidase, W290h Mutan 2e-11
2eid_A639 Galactose Oxidase W290g Mutant Length = 639 2e-11
2wq8_A661 Glycan Labelling Using Engineered Variants Of Galac 2e-11
2eic_A639 Crystal Structure Of Galactose Oxidase Mutant W290f 2e-11
2eie_A639 Crystal Structure Of Galactose Oxidase Complexed Wi 2e-11
1k3i_A656 Crystal Structure Of The Precursor Of Galactose Oxi 5e-11
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution Length = 639 Back     alignment and structure 
Iteration: 1

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 179/450 (39%), Gaps = 53/450 (11%)
Query: 113 MVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYAT 172
           + + D +C   S+  NG +V +GG ND     +  +  D     WI  P  +   R Y +
Sbjct: 221 VTKHDMFCPGISMDGNGQIVVTGG-ND----AKKTSLYDSSSDSWIPGPD-MQVARGYQS 274
Query: 173 NQILPDX-----XXXXXXXXXQFNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYP 226
           +  + D               + N E Y P S    S P   +   L   +      LY 
Sbjct: 275 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ----GLY- 329
Query: 227 FVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGS 286
                 D + ++F   +  +F    +  +  Y      D ++     S+  +  D  +G+
Sbjct: 330 ----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMSGN 385
Query: 287 T----SVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVM 342
                +V+ +I+  GG+ +   + AT    I  +   G    +  N  +    +   R  
Sbjct: 386 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG----TSPNTVFASNGLYFARTF 441
Query: 343 GDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYH 402
              ++LP+G   I  G + G   +E +  P+  P IY P + T   F    P++  R+YH
Sbjct: 442 HTSVVLPDGSTFITGGQRRGIP-FEDST-PVFTPEIYVPEQDT---FYKQNPNSIVRVYH 496
Query: 403 SSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYL--SAEYATVRPKILSLN 460
           S ++LL DGRV  GG                    + ++P YL  S      RPKI +  
Sbjct: 497 SISLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKI-TRT 549
Query: 461 ETIGYKATFQVRFSVEEYLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVY 520
            T   K   ++  S +  +S       LI     TH+   +QR + L  L  +   SY +
Sbjct: 550 STQSVKVGGRITISTDSSIS----KASLIRYGTATHTVNTDQRRIPL-TLTNNGGNSYSF 604
Query: 521 HLAAVAPSTAEIAPPGYYLLFVVH-AEIPS 549
            +    PS + +A PGY++LFV++ A +PS
Sbjct: 605 QV----PSDSGVALPGYWMLFVMNSAGVPS 630
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant Length = 639 Back     alignment and structure
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant Length = 639 Back     alignment and structure
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution Length = 661 Back     alignment and structure
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f Length = 639 Back     alignment and structure
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide Length = 639 Back     alignment and structure
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase Length = 656 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query557
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 2e-93
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 Back     alignment and structure
 Score =  298 bits (764), Expect = 2e-93
 Identities = 97/556 (17%), Positives = 189/556 (33%), Gaps = 58/556 (10%)

Query: 18  HFIFVPLIPSQVLPPYAGSQGEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSL 77
           +   V +  +   P  + ++                 +      + +       +     
Sbjct: 140 YVRLVAITEANGQPWTSIAEINVFQASSYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGR 199

Query: 78  SSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRP---LMVQTDTWCSSGSVLPNGTLVQS 134
                 +              +  +D +T         + + D +C   S+  NG +V +
Sbjct: 200 VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVT 259

Query: 135 GGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRR-----Q 189
           GG          +         WI  P  +   R Y ++  + DGR+  IGG       +
Sbjct: 260 GGN--DAKKTSLYDSSS---DSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFE 313

Query: 190 FNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANTRSILFD 248
            N E Y P S    S P   +   L       +  LY       D + ++F   +  +F 
Sbjct: 314 KNGEVYSPSSKTWTSLPNAKVNPMLTA----DKQGLYR-----SDNHAWLFGWKKGSVFQ 364

Query: 249 YKQNKVLKEYPEIPGADPRNYPSTGSSVLLPLDERNGST----SVQAEIMICGGAQNASF 304
              +  +  Y      D ++     S+  +  D   G+     +V+ +I+  GG+ +   
Sbjct: 365 AGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD 424

Query: 305 ALATQGVFIRAISTCGRLVVSHANPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTA 364
           + AT    I  +   G    +  N  +    +   R     ++LP+G   I  G + G  
Sbjct: 425 SDATTNAHIITLGEPG----TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP 480

Query: 365 GWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYY 424
                  P+  P IY P +     F    P++  R+YHS ++LL DGRV  GG       
Sbjct: 481 FE--DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLC--- 532

Query: 425 NFTNVVYPTDLSLEAYSPPYLSAEYATVRPK---ILSLNETIGYKATFQVRFSVEEYLSA 481
                        + ++P YL      +  +     +  +++       +         +
Sbjct: 533 ---GDCTTNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQSVKVGGRITIST------DS 583

Query: 482 GVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLF 541
            +    LI     TH+   +QR + L +      +      +   PS + +A PGY++LF
Sbjct: 584 SISKASLIRYGTATHTVNTDQRRIPLTLTNNGGNS-----YSFQVPSDSGVALPGYWMLF 638

Query: 542 VVHAE-IPSSGMWVKM 556
           V+++  +PS    +++
Sbjct: 639 VMNSAGVPSVASTIRV 654
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query557
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 100.0
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.98
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.98
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.97
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.97
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.97
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.97
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.96
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 99.96
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.94
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.93
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.89
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 98.08
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 98.02
3ow8_A321 WD repeat-containing protein 61; structural genomi 97.92
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 97.92
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 97.87
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 97.87
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.85
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.75
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.73
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 97.71
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 97.7
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 97.69
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 97.68
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 97.67
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 97.63
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.62
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 97.55
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 97.53
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.52
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.52
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.51
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 97.49
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 97.46
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 97.43
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 97.41
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 97.39
4e54_B435 DNA damage-binding protein 2; beta barrel, double 97.37
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 97.32
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 97.32
3ow8_A321 WD repeat-containing protein 61; structural genomi 97.31
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 97.29
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.23
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 97.23
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 97.21
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 97.21
3jrp_A379 Fusion protein of protein transport protein SEC13 97.2
2ymu_A577 WD-40 repeat protein; unknown function, two domain 97.19
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 97.18
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 97.17
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 97.17
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 97.17
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 97.16
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 97.16
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 97.14
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.12
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 97.1
1nr0_A611 Actin interacting protein 1; beta propeller, WD40 97.1
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 97.07
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 97.06
4g56_B357 MGC81050 protein; protein arginine methyltransfera 97.04
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 97.04
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 97.01
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 97.0
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 97.0
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 96.99
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 96.96
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 96.96
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 96.94
2pm7_B297 Protein transport protein SEC13, protein transport 96.93
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 96.91
2ymu_A577 WD-40 repeat protein; unknown function, two domain 96.91
3jro_A 753 Fusion protein of protein transport protein SEC13 96.91
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 96.9
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 96.9
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 96.89
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 96.87
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 96.87
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 96.84
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.82
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 96.82
3v9f_A781 Two-component system sensor histidine kinase/RESP 96.78
1nr0_A 611 Actin interacting protein 1; beta propeller, WD40 96.77
3sfz_A1249 APAF-1, apoptotic peptidase activating factor 1; a 96.75
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 96.74
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 96.67
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 96.67
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 96.61
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 96.61
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 96.61
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 96.59
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 96.56
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 96.55
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 96.54
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 96.53
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 96.52
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 96.52
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 96.46
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 96.45
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 96.31
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 96.28
4g56_B357 MGC81050 protein; protein arginine methyltransfera 96.25
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 96.23
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 96.18
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 96.16
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 96.11
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 96.09
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 96.09
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 96.07
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 96.07
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 96.0
2pm7_B297 Protein transport protein SEC13, protein transport 95.98
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 95.9
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 95.89
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 95.89
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 95.86
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 95.76
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 95.76
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 95.74
3jrp_A379 Fusion protein of protein transport protein SEC13 95.66
4e54_B435 DNA damage-binding protein 2; beta barrel, double 95.63
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 95.58
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 95.52
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 95.51
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 95.43
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 95.36
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 95.3
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 95.29
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 95.24
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 95.16
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 95.16
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 95.04
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 94.94
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 94.89
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 94.78
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 94.76
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 94.62
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 94.58
3dw8_B447 Serine/threonine-protein phosphatase 2A 55 kDa RE 94.51
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 94.42
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 94.23
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 94.23
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 94.21
3jro_A 753 Fusion protein of protein transport protein SEC13 93.93
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 93.71
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 93.53
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 93.48
3gre_A437 Serine/threonine-protein kinase VPS15; seven-blade 93.36
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 93.27
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 93.17
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 93.02
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 93.01
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 92.97
2bkl_A695 Prolyl endopeptidase; mechanistic study, celiac sp 92.88
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 92.85
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 92.82
3dw8_B447 Serine/threonine-protein phosphatase 2A 55 kDa RE 92.66
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 92.42
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 92.24
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 92.21
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 92.12
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 91.99
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 91.76
2p4o_A306 Hypothetical protein; putative lactonase, structur 90.95
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 90.68
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 90.57
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 90.42
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 90.33
2xyi_A430 Probable histone-binding protein CAF1; transcripti 90.16
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 90.05
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 89.76
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 89.27
2z3z_A706 Dipeptidyl aminopeptidase IV; peptidase family S9, 88.59
4a2l_A795 BT_4663, two-component system sensor histidine kin 88.42
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 88.22
3o4h_A582 Acylamino-acid-releasing enzyme; alpha/beta hydrol 87.42
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 87.16
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 87.16
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 87.15
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 86.96
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 86.45
3v9f_A781 Two-component system sensor histidine kinase/RESP 86.37
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 85.53
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 85.46
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 84.96
4a2l_A795 BT_4663, two-component system sensor histidine kin 83.01
3sjl_D386 Methylamine dehydrogenase heavy chain; MAUG, C-hem 82.75
1tl2_A236 L10, protein (tachylectin-2); animal lectin, horse 82.51
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 82.38
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 81.61
2p9w_A334 MAL S 1 allergenic protein; beta propeller; 1.35A 81.29
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 80.95
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 80.71
2fp8_A322 Strictosidine synthase; six bladed beta propeller 80.52
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
Probab=100.00  E-value=1.7e-72  Score=634.48  Aligned_cols=457  Identities=21%  Similarity=0.316  Sum_probs=350.2

Q ss_pred             CCCCCCCCCCceEEccCCcccceeEEEEee-CCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCC
Q 041651           29 VLPPYAGSQGEWNLLHESIGISAMHMQLLH-DNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATN  107 (557)
Q Consensus        29 ~~~~~~~~~g~W~~~~~~~~~~~~h~~~~~-~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~  107 (557)
                      ..+.||+..++|+.+.++ +....|+++++ +||||++||....  .+    |..          ......+.+||+.++
T Consensus       167 ~~~~~dp~~~~W~~~~~~-P~~~~~~av~~~~g~l~v~GG~~~~--~~----~~~----------~~~~~~~~~yd~~t~  229 (656)
T 1k3i_A          167 SYTAPQPGLGRWGPTIDL-PIVPAAAAIEPTSGRVLMWSSYRND--AF----GGS----------PGGITLTSSWDPSTG  229 (656)
T ss_dssp             CCCCCCTTSCEEEEEEEC-SSCCSEEEEETTTTEEEEEEECCCT--TT----CSC----------CCSEEEEEEECTTTC
T ss_pred             ccccCCCCCCeeeeeccC-CCCceeEEEEecCCEEEEEeccccc--cc----ccC----------CCCeEEEEEEeCCCC
Confidence            589999999999998775 45678888887 9999999997521  11    100          012346899999999


Q ss_pred             cEEECccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEE
Q 041651          108 AYRPLMVQ---TDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIII  184 (557)
Q Consensus       108 ~w~~l~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvv  184 (557)
                      +|+.++.+   +..+|++++++.||+||++||...  .++++|||+   +++|+++++ |+.+||+|++++++||+|||+
T Consensus       230 ~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~---t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~  303 (656)
T 1k3i_A          230 IVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS---SDSWIPGPD-MQVARGYQSSATMSDGRVFTI  303 (656)
T ss_dssp             CBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG---GTEEEECCC-CSSCCSSCEEEECTTSCEEEE
T ss_pred             cEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc---CCceeECCC-CCccccccceEEecCCeEEEE
Confidence            99988764   566888888889999999999754  479999999   899999986 999999999999989999999


Q ss_pred             cCcCC-----CceeEe-cCCCCCCCCCceeeecccccccccccCCccceEEEeeCCcEEEEEcC-----------ceEEE
Q 041651          185 GGRRQ-----FNYEFY-PKSDEDLSFPQTFMLHFLLETRDYAENNLYPFVHLLPDGNLFIFANT-----------RSILF  247 (557)
Q Consensus       185 GG~~~-----~~~E~y-P~~~~~~~~~~w~~~~~l~~t~d~~~~~~yp~~~~~~~G~ifv~gg~-----------~~~~y  247 (557)
                      ||...     .++|+| |.+      ++|..++.....  ....... +..+..++++|++||.           ..++|
T Consensus       304 GG~~~~~~~~~~~e~yd~~t------~~W~~~~~~~~~--p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~y  374 (656)
T 1k3i_A          304 GGSWSGGVFEKNGEVYSPSS------KTWTSLPNAKVN--PMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWY  374 (656)
T ss_dssp             CCCCCSSSCCCCEEEEETTT------TEEEEETTSCSG--GGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEE
T ss_pred             eCcccCCcccccceEeCCCC------CcceeCCCcccc--ccccccc-cceeecCCceEEEECCCCcEEEecCccceeee
Confidence            99532     468999 773      378765311000  0000000 1122357888888853           36899


Q ss_pred             eCCCCeEEEEecCCCCCC-CCccCCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCC---ceEEEE
Q 041651          248 DYKQNKVLKEYPEIPGAD-PRNYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAIS---TCGRLV  323 (557)
Q Consensus       248 Dp~t~~W~~~~p~lp~~~-~r~~~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~---s~~~~d  323 (557)
                      |+++++|.......+... ....+..+++++++.    +    +++||++||.+....        ..+++   .+++||
T Consensus       375 d~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~----~----~~~i~v~GG~~~~~~--------~~~~~~~~~v~~yd  438 (656)
T 1k3i_A          375 YTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA----V----KGKILTFGGSPDYQD--------SDATTNAHIITLGE  438 (656)
T ss_dssp             ECSTTCEEEEEEECEETTEECCCCBTCEEEEEET----T----TTEEEEECCBSSSSS--------SBCCCCEEEEECCS
T ss_pred             ecCCcceeecCCccccccccCCCCCCCceEeccC----C----CCeEEEEeCCCCCCC--------CCcCCcceEEEcCC
Confidence            999999985432221100 000112367777653    1    899999999642110        02344   344555


Q ss_pred             ecCCCCcceee---cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccc
Q 041651          324 VSHANPSWVME---EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRM  400 (557)
Q Consensus       324 ~~~~~~~W~~~---~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~  400 (557)
                      +..  ++|+..   +|+.+|.++++++++||+|||+||.+.+. +|. +.+++.++|+|||+++   +|+.+++|+.+|.
T Consensus       439 ~~~--~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~  511 (656)
T 1k3i_A          439 PGT--SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRV  511 (656)
T ss_dssp             TTS--CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCC
T ss_pred             CCC--CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccc
Confidence            543  689863   89999999999999999999999986432 222 3456789999999999   9999999999999


Q ss_pred             ccccceeccCCcEEEecCCCCcccccccccCCCcceEEEEcCCCCCC--ccCCCCCceecC-CccccCCceEEEEEEeec
Q 041651          401 YHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSA--EYATVRPKILSL-NETIGYKATFQVRFSVEE  477 (557)
Q Consensus       401 yhs~a~llpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~--~~~~~RP~i~~~-p~~~~~g~~~~v~~~~~~  477 (557)
                      ||+++++++||+||++||+.++.+.      ++++++|+|+||||++  +..+.||+|+++ |+++.||++|+|+++.  
T Consensus       512 ~hs~a~ll~dg~v~v~GG~~~~~~~------~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~~~~~~g~~~~~~~~~--  583 (656)
T 1k3i_A          512 YHSISLLLPDGRVFNGGGGLCGDCT------TNHFDAQIFTPNYLYNSNGNLATRPKITRTSTQSVKVGGRITISTDS--  583 (656)
T ss_dssp             TTEEEEECTTSCEEEEECCCCTTCS------CCCCEEEEEECGGGBCTTSSBCCCCCEEEESCSEEETTCEEEEEESS--
T ss_pred             cccHhhcCCCcEEEecCCCCCCCCC------CCeeEEEEEeChhhccCCCCcCCCCcccccCCceecCCCEEEEEEec--
Confidence            9999999999999999998776542      3478999999999986  356789999994 9999999999999863  


Q ss_pred             ccccceEEEEEEcCCccccccCCCcceEEeEeEEEeecCcceEEEEEECCCCCCcCCCcceEEEEEc-CCCCCccEEEEc
Q 041651          478 YLSAGVVSVRLIAPSFTTHSFGMNQRMVVLKILEVSHVTSYVYHLAAVAPSTAEIAPPGYYLLFVVH-AEIPSSGMWVKM  556 (557)
Q Consensus       478 ~~~~~~~~v~l~~~~~~TH~~~~~qR~v~L~~~~~~~~g~~~~~~~~~~P~~~~~~ppG~ymlf~~~-~gvPS~a~~v~v  556 (557)
                          .+.+|+|+|++|+||++||+||+|+|+++.   .|+  .+++|++|+|++||||||||||||+ +||||+|+||+|
T Consensus       584 ----~~~~~~l~~~~~~th~~~~~qr~~~l~~~~---~~~--~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~  654 (656)
T 1k3i_A          584 ----SISKASLIRYGTATHTVNTDQRRIPLTLTN---NGG--NSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRV  654 (656)
T ss_dssp             ----CCSEEEEEECCEEETTBCSSCCEEECCEEE---EET--TEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEE
T ss_pred             ----cceEEEEEecCccccCcCCCCcEEecceEe---cCC--CEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEE
Confidence                357899999999999999999999999975   232  3678999999999999999999996 999999999998


Q ss_pred             C
Q 041651          557 E  557 (557)
Q Consensus       557 ~  557 (557)
                      +
T Consensus       655 ~  655 (656)
T 1k3i_A          655 T  655 (656)
T ss_dssp             E
T ss_pred             e
Confidence            4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Back     alignment and structure
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* Back     alignment and structure
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... Back     alignment and structure
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 557
d1k3ia3387 b.69.1.1 (A:151-537) Galactose oxidase, central do 7e-33
d1k3ia1102 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal 6e-25
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 Back     information, alignment and structure

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

 Score =  127 bits (319), Expect = 7e-33
 Identities = 69/418 (16%), Positives = 127/418 (30%), Gaps = 53/418 (12%)

Query: 38  GEWNLLHESIGISAMHMQLLHDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTA 97
           G W    +   + A         RV+M+                  +             
Sbjct: 9   GRWGPTIDLPIVPAAAAIEPTSGRVLMWSS----------------YRNDAFGGSPGGIT 52

Query: 98  HSILYDVATNAYR---PLMVQTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQ 154
            +  +D +T         + + D +C   S+  NG +V +GG          +    D  
Sbjct: 53  LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN--DAKKTSLYDSSSDSW 110

Query: 155 CDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQFN------YEFYPKSDEDLSFPQTF 208
                    +   R Y ++  + DGR+  IGG             + P S    S P   
Sbjct: 111 IPG----PDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK 166

Query: 209 MLHFLLETRDYA-ENNLYPFVHLLPDGNLFIFANTRSILFDYKQNKVLKEYPEIPGADPR 267
           +   L   +     ++ + ++     G++F    + ++ + Y       +      ++  
Sbjct: 167 VNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 226

Query: 268 NYPSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHA 327
             P       +  D   G               +A+       +     S          
Sbjct: 227 VAPDAMCGNAVMYDAVKGKILT-FGGSPDYQDSDATTNAHIITLGEPGTSP--------- 276

Query: 328 NPSWVMEEMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSR 387
           N  +    +   R     ++LP+G   I  G + G    +    P+  P IY P + T  
Sbjct: 277 NTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED--STPVFTPEIYVPEQDT-- 332

Query: 388 RFSVMEPSTRPRMYHSSAILLTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYL 445
            F    P++  R+YHS ++LL DGRV  GG                    + ++P YL
Sbjct: 333 -FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLC------GDCTTNHFDAQIFTPNYL 383
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 102 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query557
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 100.0
d1k3ia1102 Galactose oxidase, C-terminal domain {Fungi (Fusar 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.95
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 99.94
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 98.04
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.85
d1tbga_340 beta1-subunit of the signal-transducing G protein 97.62
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 97.52
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.28
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 97.28
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 97.12
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 97.0
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 96.97
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 96.85
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 96.72
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 96.62
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 96.5
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 96.12
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 95.79
d1pbyb_337 Quinohemoprotein amine dehydrogenase B chain {Para 95.7
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 95.61
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 95.27
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 95.15
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 94.9
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 94.87
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 94.72
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 94.66
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 93.36
d1yfqa_342 Cell cycle arrest protein BUB3 {Baker's yeast (Sac 93.23
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 92.62
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 92.39
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 92.34
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 92.06
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 91.31
d1tbga_340 beta1-subunit of the signal-transducing G protein 90.65
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 89.85
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 88.25
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 88.18
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 87.42
d1mdah_368 Methylamine dehydrogenase, H-chain {Paracoccus den 87.23
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 87.21
d2ghsa1295 Regucalcin {Agrobacterium tumefaciens [TaxId: 358] 86.68
d1mdah_368 Methylamine dehydrogenase, H-chain {Paracoccus den 86.39
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 83.83
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 82.76
d1yfqa_342 Cell cycle arrest protein BUB3 {Baker's yeast (Sac 82.65
d1p22a2293 F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom 82.44
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 81.36
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=100.00  E-value=5.4e-47  Score=393.64  Aligned_cols=356  Identities=21%  Similarity=0.342  Sum_probs=262.9

Q ss_pred             CCCCCceEEccCCcccceeEEEEe-eCCeEEEEeecccCCCcccCCCCccccCCCCccccccCcceEEEEECCCCcEEEC
Q 041651           34 AGSQGEWNLLHESIGISAMHMQLL-HDNRVIMFDRTDFGQSNLSLSSGRCRFDPYDTVLHTDCTAHSILYDVATNAYRPL  112 (557)
Q Consensus        34 ~~~~g~W~~~~~~~~~~~~h~~~~-~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l  112 (557)
                      +|..|+|+..+++ +..+.|++++ .+||||++||....  ...   +.           ......+++|||++++|+.+
T Consensus         5 ~p~~g~W~~~~~~-p~~~~~~a~~~~~gkv~v~GG~~~~--~~~---~~-----------~~~~~~~~~yd~~t~~w~~~   67 (387)
T d1k3ia3           5 QPGLGRWGPTIDL-PIVPAAAAIEPTSGRVLMWSSYRND--AFG---GS-----------PGGITLTSSWDPSTGIVSDR   67 (387)
T ss_dssp             CTTSCEEEEEEEC-SSCCSEEEEETTTTEEEEEEECCCT--TTC---SC-----------CCSEEEEEEECTTTCCBCCC
T ss_pred             CCCCCccCCcCCC-CccccEEEEEeeCCEEEEEEeecCc--ccC---CC-----------CCceeEEEEEECCCCcEeec
Confidence            3778999998765 4566666655 59999999997421  110   10           01234688999999999887


Q ss_pred             cc---CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCceecCCcccccccCcceEEEecCCcEEEEcCcCC
Q 041651          113 MV---QTDTWCSSGSVLPNGTLVQSGGYNDGDHVVRTFTPCDDDQCDWIELPQHLSERRWYATNQILPDGRIIIIGGRRQ  189 (557)
Q Consensus       113 ~~---~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~~~t~~W~~~~~~m~~~R~y~s~~~L~dG~vyvvGG~~~  189 (557)
                      +.   .+..+|++++++.||+||++||..  .+++++|||.   +++|+++++ |+.+||+|+++++.||+||++||...
T Consensus        68 ~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~--~~~~~~yd~~---~~~w~~~~~-~~~~r~~~~~~~~~dG~v~v~GG~~~  141 (387)
T d1k3ia3          68 TVTVTKHDMFCPGISMDGNGQIVVTGGND--AKKTSLYDSS---SDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWS  141 (387)
T ss_dssp             EEEECSCCCSSCEEEECTTSCEEEECSSS--TTCEEEEEGG---GTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCC
T ss_pred             CCCCCCcccceeEEEEecCCcEEEeecCC--CcceeEecCc---cCccccccc-ccccccccceeeecCCceeeeccccc
Confidence            54   356789999999999999999974  4789999999   899999986 99999999999999999999999754


Q ss_pred             -----CceeEe-cCCCCCCCCCceeeeccccccc----c---cccCCccceEEEeeCCcEEEEEcCc--eEEEeCCCCeE
Q 041651          190 -----FNYEFY-PKSDEDLSFPQTFMLHFLLETR----D---YAENNLYPFVHLLPDGNLFIFANTR--SILFDYKQNKV  254 (557)
Q Consensus       190 -----~~~E~y-P~~~~~~~~~~w~~~~~l~~t~----d---~~~~~~yp~~~~~~~G~ifv~gg~~--~~~yDp~t~~W  254 (557)
                           .++|+| |.+      ++|..++.+....    .   ......|+.++...+|++|++|+..  .+.||+.+..|
T Consensus       142 ~~~~~~~v~~yd~~~------~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~  215 (387)
T d1k3ia3         142 GGVFEKNGEVYSPSS------KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV  215 (387)
T ss_dssp             SSSCCCCEEEEETTT------TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred             cccccceeeeecCCC------CceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcE
Confidence                 367999 774      4887664322110    0   0123457888899999999999864  57889999999


Q ss_pred             EEEecCCCCCCCCcc---CCCCceEeecCcCCCCCcccccEEEEEcCCCCccccccccccccccCCceEEEEecCCC---
Q 041651          255 LKEYPEIPGADPRNY---PSTGSSVLLPLDERNGSTSVQAEIMICGGAQNASFALATQGVFIRAISTCGRLVVSHAN---  328 (557)
Q Consensus       255 ~~~~p~lp~~~~r~~---~~~g~~vllp~~~~~~~~~~~g~I~v~GG~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~---  328 (557)
                      .. .+.++..  |..   ...+.+++++..        ++|||++||.......        ......+.++.....   
T Consensus       216 ~~-~~~~~~~--~~~~~~~~~~~~~~~~~~--------~g~v~v~GG~~~~~~~--------~~~~~~~~~~~~~~~~~~  276 (387)
T d1k3ia3         216 KS-AGKRQSN--RGVAPDAMCGNAVMYDAV--------KGKILTFGGSPDYQDS--------DATTNAHIITLGEPGTSP  276 (387)
T ss_dssp             EE-EEECEET--TEECCCCBTCEEEEEETT--------TTEEEEECCBSSSSSS--------BCCCCEEEEECCSTTSCC
T ss_pred             ee-ccccccC--cccCcccccccEEEeecc--------CCceEEEEeccCCCCC--------cccceeecccccccccCC
Confidence            74 5444321  111   112455555431        7999999997532211        122233344443322   


Q ss_pred             Ccceee-cCCCCceeeeEEEcCCCeEEEEcCcCCCCCCcccCCCCccccEEEcCCCCCCCceEecCCCCCccccccccee
Q 041651          329 PSWVME-EMPLPRVMGDMILLPNGDVIIINGAQLGTAGWELARGPMTRPIIYRPSEQTSRRFSVMEPSTRPRMYHSSAIL  407 (557)
Q Consensus       329 ~~W~~~-~M~~~R~~~~~v~lpdG~I~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W~~~~~~~~~R~yhs~a~l  407 (557)
                      ..|+.. +|+.+|.++++++++||+|||+||...+...  ....+++++|+|||+++   +|+.+++|+.+|.+||+++|
T Consensus       277 ~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~--~~~~~~~~ve~Ydp~~~---~W~~~~~~~~~R~~Hs~a~l  351 (387)
T d1k3ia3         277 NTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLL  351 (387)
T ss_dssp             EEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT--CCCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEE
T ss_pred             CceeeccccccccccceeeeccCCeEEEECCcccCccC--CCCcEeceEEEEECCCC---eEEECCCCCCcccceEEEEE
Confidence            346555 8999999999999999999999998744321  23456779999999999   99999999999999999999


Q ss_pred             ccCCcEEEecCCCCcccccccccCCCcceEEEEcCCCCCCc
Q 041651          408 LTDGRVLIGGSNPHIYYNFTNVVYPTDLSLEAYSPPYLSAE  448 (557)
Q Consensus       408 lpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~~  448 (557)
                      ++||||||+||+.+++.      ..++.++|+|+|||||++
T Consensus       352 ~~dG~v~v~GG~~~~~~------~~~~~~~e~y~Ppyl~~~  386 (387)
T d1k3ia3         352 LPDGRVFNGGGGLCGDC------TTNHFDAQIFTPNYLYNS  386 (387)
T ss_dssp             CTTSCEEEEECCCCTTC------SCCCCEEEEEECGGGBCT
T ss_pred             CCCCEEEEEeCCCcCCC------CcccceEEEEcchhccCC
Confidence            99999999999866543      223779999999999864
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure