Citrus Sinensis ID: 041686
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 325 | ||||||
| 118481295 | 342 | unknown [Populus trichocarpa] | 0.938 | 0.891 | 0.805 | 1e-141 | |
| 16604527 | 337 | AT5g51550/K17N15_10 [Arabidopsis thalian | 0.990 | 0.955 | 0.772 | 1e-140 | |
| 449460796 | 346 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.939 | 0.780 | 1e-140 | |
| 15242118 | 337 | protein EXORDIUM like 3 [Arabidopsis tha | 0.990 | 0.955 | 0.772 | 1e-140 | |
| 21592873 | 337 | unknown [Arabidopsis thaliana] | 0.990 | 0.955 | 0.769 | 1e-139 | |
| 359490184 | 348 | PREDICTED: uncharacterized protein LOC10 | 0.935 | 0.873 | 0.785 | 1e-139 | |
| 297795963 | 337 | AT5g51550/K17N15_10 [Arabidopsis lyrata | 0.990 | 0.955 | 0.766 | 1e-138 | |
| 224136774 | 309 | predicted protein [Populus trichocarpa] | 0.910 | 0.957 | 0.805 | 1e-136 | |
| 356545051 | 348 | PREDICTED: uncharacterized protein LOC10 | 0.929 | 0.867 | 0.762 | 1e-135 | |
| 356531708 | 348 | PREDICTED: uncharacterized protein LOC10 | 0.944 | 0.882 | 0.753 | 1e-134 |
| >gi|118481295|gb|ABK92591.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 256/318 (80%), Positives = 279/318 (87%), Gaps = 13/318 (4%)
Query: 21 PSIAWRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKS 80
P WRPWP++K NSS+ +Y +SKK+EGSSEFVH++YHMGPVLT NITVH IWYG W KS
Sbjct: 25 PITCWRPWPHLKPNSSDLLYDSSKKFEGSSEFVHLRYHMGPVLTGNITVHTIWYGRWEKS 84
Query: 81 QKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKS 140
QK+IIREFINSIS V ++ PSV+GWW+TVQLYTDQTGANIS TV+LGQEKNDRFYSHGKS
Sbjct: 85 QKKIIREFINSISTVNARPPSVSGWWRTVQLYTDQTGANISHTVQLGQEKNDRFYSHGKS 144
Query: 141 LTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVG 200
LTRLS+QSVIKS VTA+SKPLP NPK GLYLLLTS DVYVQDFCGQVCGFHYFTFPSIVG
Sbjct: 145 LTRLSIQSVIKSAVTAKSKPLPTNPKNGLYLLLTSDDVYVQDFCGQVCGFHYFTFPSIVG 204
Query: 201 YTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKA-------------VSVIAHEIAELAT 247
YTLPYAWVGNS KLCPGVCAYPF+VP+Y+PGLKA +SVIAHEIAELAT
Sbjct: 205 YTLPYAWVGNSEKLCPGVCAYPFSVPKYIPGLKALKSPNGDVGVDGMISVIAHEIAELAT 264
Query: 248 NPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQ 307
NPLVNAWYAG DP PVEIADLCEGIYGTGGGGSYTGQ+L DGATYNMNGIRR+FLVQ
Sbjct: 265 NPLVNAWYAGQDPSFPVEIADLCEGIYGTGGGGSYTGQMLLDHDGATYNMNGIRRKFLVQ 324
Query: 308 WVWNHVVNYCTGPNALDQ 325
WVWNH V+YCTGPNALDQ
Sbjct: 325 WVWNHFVSYCTGPNALDQ 342
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16604527|gb|AAL24269.1| AT5g51550/K17N15_10 [Arabidopsis thaliana] gi|21655293|gb|AAM65358.1| AT5g51550/K17N15_10 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449460796|ref|XP_004148130.1| PREDICTED: uncharacterized protein LOC101209305 [Cucumis sativus] gi|449526565|ref|XP_004170284.1| PREDICTED: uncharacterized protein LOC101231285 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|15242118|ref|NP_199968.1| protein EXORDIUM like 3 [Arabidopsis thaliana] gi|16226762|gb|AAL16255.1|AF428325_1 AT5g51550/K17N15_10 [Arabidopsis thaliana] gi|9758197|dbj|BAB08671.1| unnamed protein product [Arabidopsis thaliana] gi|332008714|gb|AED96097.1| protein EXORDIUM like 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|21592873|gb|AAM64823.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|359490184|ref|XP_002264723.2| PREDICTED: uncharacterized protein LOC100266367 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297795963|ref|XP_002865866.1| AT5g51550/K17N15_10 [Arabidopsis lyrata subsp. lyrata] gi|297311701|gb|EFH42125.1| AT5g51550/K17N15_10 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|224136774|ref|XP_002322412.1| predicted protein [Populus trichocarpa] gi|222869408|gb|EEF06539.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356545051|ref|XP_003540959.1| PREDICTED: uncharacterized protein LOC100813279 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356531708|ref|XP_003534418.1| PREDICTED: uncharacterized protein LOC100778428 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 325 | ||||||
| TAIR|locus:2153087 | 337 | EXL3 "AT5G51550" [Arabidopsis | 0.92 | 0.887 | 0.757 | 5.7e-130 | |
| TAIR|locus:2059652 | 363 | EXL5 "AT2G17230" [Arabidopsis | 0.864 | 0.774 | 0.543 | 3.3e-86 | |
| TAIR|locus:2063399 | 323 | EXL7 "AT2G35150" [Arabidopsis | 0.596 | 0.600 | 0.542 | 2e-77 | |
| TAIR|locus:2203314 | 309 | PHI-1 "AT1G35140" [Arabidopsis | 0.796 | 0.838 | 0.318 | 4.7e-32 | |
| TAIR|locus:2138753 | 314 | EXO "AT4G08950" [Arabidopsis t | 0.793 | 0.821 | 0.341 | 9.1e-29 | |
| TAIR|locus:2173428 | 305 | EXL2 "AT5G64260" [Arabidopsis | 0.753 | 0.803 | 0.334 | 2.4e-28 | |
| TAIR|locus:2184792 | 278 | EXL4 "AT5G09440" [Arabidopsis | 0.72 | 0.841 | 0.333 | 1.4e-23 | |
| TAIR|locus:2075482 | 332 | EXL6 "AT3G02970" [Arabidopsis | 0.443 | 0.433 | 0.272 | 9.2e-08 |
| TAIR|locus:2153087 EXL3 "AT5G51550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 237/313 (75%), Positives = 265/313 (84%)
Query: 25 WRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRI 84
+RP+P K N S+ I+ SKK+EGSS V ++YHMGPVLT NITVHPIWYGTW KSQK+I
Sbjct: 26 YRPYPP-KTNGSDQIFDASKKFEGSSNLVRLRYHMGPVLTNNITVHPIWYGTWQKSQKKI 84
Query: 85 IREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRL 144
IREFINSISAV SKHPSV+GWWKTVQLYTDQTG+NI+ TVRLG+EKNDRFYSHGKSLTRL
Sbjct: 85 IREFINSISAVGSKHPSVSGWWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTRL 144
Query: 145 SVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLP 204
S+QSVIKS VT+RS+PLP+NPK GLYLLLT+ DVYVQDFCGQVCGFHYFTFPSIVG+TLP
Sbjct: 145 SIQSVIKSAVTSRSRPLPVNPKSGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLP 204
Query: 205 YAWVGNSAKLCPGVCAYPFAVPQYMPGLKAV-------------SVIAHEIAELATNPLV 251
YAWVGNSAKLCPGVCAYPFAVP ++PGLK V SVIAHEIAELATNPLV
Sbjct: 205 YAWVGNSAKLCPGVCAYPFAVPAFIPGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLV 264
Query: 252 NAWYAGPDPVAPVEIADLCEXXXXXXXXXXXXXQLLDGEDGATYNMNGIRRRFLVQWVWN 311
NAWYAGPDPVAPVEIADLCE Q+L+ GATYN+NGIRRR+L+QW+W+
Sbjct: 265 NAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQMLNDHSGATYNVNGIRRRYLIQWLWS 324
Query: 312 HVVNYCTGPNALD 324
HVV+YCTGPNALD
Sbjct: 325 HVVSYCTGPNALD 337
|
|
| TAIR|locus:2059652 EXL5 "AT2G17230" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2063399 EXL7 "AT2G35150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2203314 PHI-1 "AT1G35140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2138753 EXO "AT4G08950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2173428 EXL2 "AT5G64260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2184792 EXL4 "AT5G09440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075482 EXL6 "AT3G02970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 325 | |||
| pfam04674 | 273 | pfam04674, Phi_1, Phosphate-induced protein 1 cons | 1e-134 |
| >gnl|CDD|218205 pfam04674, Phi_1, Phosphate-induced protein 1 conserved region | Back alignment and domain information |
|---|
Score = 381 bits (980), Expect = e-134
Identities = 131/283 (46%), Positives = 169/283 (59%), Gaps = 26/283 (9%)
Query: 55 MKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKH-PSVAGWWKTVQLYT 113
+ YHMG VL+ NI+V+ IWYG + +Q+ IIR+F+ S+S+ PSVA WWKTV+LY
Sbjct: 1 LTYHMGAVLSGNISVNLIWYGKFTPAQRAIIRDFLLSLSSPSPAPSPSVAAWWKTVELYY 60
Query: 114 DQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLL 173
DQTGANIS ++ LG + D YS GKSLTRL +QS+ T +GG+YL+L
Sbjct: 61 DQTGANISASLVLGGQVLDESYSLGKSLTRLQIQSLAAKAGT---------HRGGVYLVL 111
Query: 174 TSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLK 233
TS DV V+ FC CGFH TFPS+VGY YAWVGNSA CPG CA+PF P Y P
Sbjct: 112 TSPDVTVEGFCMSRCGFHGSTFPSVVGYRFAYAWVGNSATQCPGQCAWPFHQPVYGPQAP 171
Query: 234 A-------------VSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGG 280
V +AH +A TNP N +Y G AP+E A C G+YG+G
Sbjct: 172 PLVAPNGDVGVDGMVINLAHLLAGTVTNPFGNGYYQGD-ATAPLEAASACPGVYGSGAYP 230
Query: 281 SYTGQLL-DGEDGATYNMNGI-RRRFLVQWVWNHVVNYCTGPN 321
Y GQLL D GA+YN NG+ R++L+ +W+ V + C+
Sbjct: 231 GYAGQLLVDAATGASYNANGVNGRKYLLPALWDPVTSACSTLV 273
|
Family of conserved plant proteins. Conserved region identified in a phosphate-induced protein of unknown function. Length = 273 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 325 | |||
| PF04674 | 273 | Phi_1: Phosphate-induced protein 1 conserved regio | 100.0 |
| >PF04674 Phi_1: Phosphate-induced protein 1 conserved region; InterPro: IPR006766 This entry represents a family of conserved plant proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-117 Score=834.00 Aligned_cols=256 Identities=49% Similarity=0.889 Sum_probs=246.4
Q ss_pred eeecCCceecccceEEEEEeecCCchhHHHHHHHHHhcCCCC-CCCCcHhHHHHHHHHhhhccCCcceeeEEeccEEeCC
Q 041686 55 MKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVE-SKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDR 133 (325)
Q Consensus 55 L~YH~GpvLtg~i~V~lIWYG~ftp~QksiI~DFl~Sls~~~-~~~PsVs~WW~t~~~Y~~~~g~~vs~~v~l~~qv~D~ 133 (325)
|+|||||||+|+|+|||||||+|+|+||+||+|||+||++++ +++|||++||+|+++|+++++++++.+|+|++|+.|+
T Consensus 1 L~YH~GplLtg~i~V~lIWYG~ftp~QkaiI~DFl~SLs~~~~~~~PSVa~WW~t~~~Y~~~~~~~~~~~v~l~~qv~D~ 80 (273)
T PF04674_consen 1 LTYHGGPLLTGNINVYLIWYGRFTPAQKAIIRDFLRSLSSSAPAPSPSVAQWWKTTEKYYDQAGANVSGRVVLGGQVSDE 80 (273)
T ss_pred CCCCCCceeecCeeEEEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhHHhhcccccccccceEEEeeEEecC
Confidence 799999999999999999999999999999999999999876 6899999999999999999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhhccCCCCCCCCCCceEEEeccCCccccccccccccCccccCcccCcceeeEEEecCCCC
Q 041686 134 FYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAK 213 (325)
Q Consensus 134 ~ySlGksLt~~~i~~lv~~ai~~~~g~lP~~~~~giylVLTa~DV~V~gFC~s~CG~H~~~~~s~~~~~~~YawVGNs~~ 213 (325)
+|||||+||++||++||++++. ++|||||||||+||.||||||++||+|++++++.++.+++|+|||||++
T Consensus 81 ~ySlGksL~~~~i~~lv~~~~~---------~~~gvylVLTa~DV~v~gFC~~~CG~H~~~~~~~~~~~~~YawVGns~~ 151 (273)
T PF04674_consen 81 NYSLGKSLSRSQIQQLVAKAIP---------DPNGVYLVLTAADVAVEGFCMSRCGFHGSTFPSSVGKRLPYAWVGNSET 151 (273)
T ss_pred CCCCCcccCHHHHHHHHHhcCC---------CCCceEEEEecccceecccccccccCCcCCcccccccceeEEEecCccC
Confidence 9999999999999999999862 4599999999999999999999999999998888888999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCchH-------------HHHHHHHHHHhhcCccccccccCCCCCCCccccccCcccccCCCCC
Q 041686 214 LCPGVCAYPFAVPQYMPGLKA-------------VSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGG 280 (325)
Q Consensus 214 qCPg~CAwPF~~P~ygP~~~p-------------vi~iA~~LAgavTNPf~ngwyqG~~~~aplEaadaC~giyG~Gayp 280 (325)
||||+||||||+|.||||.+| ||||||||||++||||+||||||+ ++||+||+|+|+||||+||||
T Consensus 152 qCPg~CAwPf~~p~ygp~~~~l~~PNgDvGvDGMvi~iA~~LA~~~TNP~~~g~yqg~-~~aplEaa~aC~giyG~Gayp 230 (273)
T PF04674_consen 152 QCPGQCAWPFHQPIYGPQGPPLVPPNGDVGVDGMVINIAHELAGAVTNPFGNGYYQGD-ATAPLEAADACAGIYGSGAYP 230 (273)
T ss_pred CCCCCCCCCCcccccCCCCCCccCCCCCcchhhHHHHHHHHHHHhhcCccccccccCC-CCCccchhhhccccccCCCCC
Confidence 999999999999999999655 999999999999999999999985 799999999999999999999
Q ss_pred CCccceeeC-CCCcccccCCCC-ceeeeeccccCCCCCccCC
Q 041686 281 SYTGQLLDG-EDGATYNMNGIR-RRFLVQWVWNHVVNYCTGP 320 (325)
Q Consensus 281 GY~G~llvD-~~GASYNa~G~~-RkfLlpa~WdP~t~sC~~p 320 (325)
||+|+|++| .+|||||++|+| |||||||||||+|++|+|+
T Consensus 231 gy~G~l~vD~~tGaSyN~~G~~gRkfLlpa~wdP~t~~C~t~ 272 (273)
T PF04674_consen 231 GYPGQLLVDPATGASYNANGVNGRKFLLPALWDPETSSCSTL 272 (273)
T ss_pred CCCcceeecCCCCceeeccccCCceEEeecccCCCcCccccc
Confidence 999999999 579999999999 9999999999999999987
|
A conserved region in these proteins was identified in a phosphate-induced protein of unknown function []. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 325 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 9e-05
Identities = 47/325 (14%), Positives = 83/325 (25%), Gaps = 126/325 (38%)
Query: 3 PVTVVLSLTLLTILLTVSPSIAWR----------PW-----------PNMKHNSSEYIYG 41
V +L L LL+ + + + P+M + YI
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM--MTRMYIEQ 115
Query: 42 NSKKYEGSSEFVHMKYHMG---PVLT-----------ANITVHPIWYG------TWLKSQ 81
+ Y + F KY++ P L N+ + G TW+
Sbjct: 116 RDRLYNDNQVFA--KYNVSRLQPYLKLRQALLELRPAKNVLID----GVLGSGKTWVALD 169
Query: 82 ----KRIIREFINSISAVESKHPSVAGWWKTV--------------QLYTD-----QTGA 118
++ + I +W + +L + +
Sbjct: 170 VCLSYKVQCKMDFKI------------FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217
Query: 119 NISRTVRL----GQEKNDRFYS---HGKSLTRLS-VQSVIKSHVTA---RSKPLPINPKG 167
+ S ++L Q + R + L L VQ+ A K
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKAWNAFNLSCK-------- 267
Query: 168 GLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYA------WVGNSA-KLCPGVCA 220
+LLT+ V DF H + T ++ L V
Sbjct: 268 ---ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324
Query: 221 -YPFAVPQYMPGLKAVSVIAHEIAE 244
P +S+IA I +
Sbjct: 325 TNPR----------RLSIIAESIRD 339
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00