Citrus Sinensis ID: 041686


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
MPPVTVVLSLTLLTILLTVSPSIAWRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYCTGPNALDQ
cccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEccccEEccccEEEEEEEEcccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccEEEEEccEEEcccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEEEcccEEccccccccccccccccccccccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHcccccccccccccEEEEEccccEEcccEEEEEEEEccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccEEEEEEEEEcccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEEccccEEccccHcccccccccccccccccEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccccccccccccccccccEEEccccccEEEEEEEEccccccccccccccc
MPPVTVVLSLTLLTILLtvspsiawrpwpnmkhnsseyiygnskkyegssefvhmkyhmgpvltanitvhpiwygtWLKSQKRIIREFINSISaveskhpsvagWWKTVQLYTDqtganisrtvrlgqekndrfyshgksltRLSVQSVIKSHvtarskplpinpkgglYLLLTSTDVyvqdfcgqvcgfhyftfpsivgytlpyawvgnsaklcpgvcaypfavpqympglKAVSVIAHEIAELatnplvnawyagpdpvapvEIADLCegiygtggggsytgqlldgedgatynmnGIRRRFLVQWVWNHVVNyctgpnaldq
MPPVTVVLSLTLLTILLTVspsiawrpwpnmkHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDqtganisrtvrlgqekndrfyshgksltrlsVQSVIKSHvtarskplpinpKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYCTGPNALDQ
MppvtvvlsltlltilltvspsiAWRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEgiygtggggsytgQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYCTGPNALDQ
***VTVVLSLTLLTILLTVSPSIAWRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYCTG******
***VTVVLSLTLLTILLTVSPSIAWRPW*************************HMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFI***************WWKTVQLYT**********VRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYC**P*****
MPPVTVVLSLTLLTILLTVSPSIAWRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYCTGPNALDQ
*PPVTVVLSLTLLTILLTVSPSIAWRPWPNM***SS**IYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYCT*******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPPVTVVLSLTLLTILLTVSPSIAWRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKAVSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWVWNHVVNYCTGPNALDQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
118481295342 unknown [Populus trichocarpa] 0.938 0.891 0.805 1e-141
16604527337 AT5g51550/K17N15_10 [Arabidopsis thalian 0.990 0.955 0.772 1e-140
449460796346 PREDICTED: uncharacterized protein LOC10 1.0 0.939 0.780 1e-140
15242118337 protein EXORDIUM like 3 [Arabidopsis tha 0.990 0.955 0.772 1e-140
21592873337 unknown [Arabidopsis thaliana] 0.990 0.955 0.769 1e-139
359490184348 PREDICTED: uncharacterized protein LOC10 0.935 0.873 0.785 1e-139
297795963337 AT5g51550/K17N15_10 [Arabidopsis lyrata 0.990 0.955 0.766 1e-138
224136774309 predicted protein [Populus trichocarpa] 0.910 0.957 0.805 1e-136
356545051348 PREDICTED: uncharacterized protein LOC10 0.929 0.867 0.762 1e-135
356531708348 PREDICTED: uncharacterized protein LOC10 0.944 0.882 0.753 1e-134
>gi|118481295|gb|ABK92591.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/318 (80%), Positives = 279/318 (87%), Gaps = 13/318 (4%)

Query: 21  PSIAWRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKS 80
           P   WRPWP++K NSS+ +Y +SKK+EGSSEFVH++YHMGPVLT NITVH IWYG W KS
Sbjct: 25  PITCWRPWPHLKPNSSDLLYDSSKKFEGSSEFVHLRYHMGPVLTGNITVHTIWYGRWEKS 84

Query: 81  QKRIIREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKS 140
           QK+IIREFINSIS V ++ PSV+GWW+TVQLYTDQTGANIS TV+LGQEKNDRFYSHGKS
Sbjct: 85  QKKIIREFINSISTVNARPPSVSGWWRTVQLYTDQTGANISHTVQLGQEKNDRFYSHGKS 144

Query: 141 LTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVG 200
           LTRLS+QSVIKS VTA+SKPLP NPK GLYLLLTS DVYVQDFCGQVCGFHYFTFPSIVG
Sbjct: 145 LTRLSIQSVIKSAVTAKSKPLPTNPKNGLYLLLTSDDVYVQDFCGQVCGFHYFTFPSIVG 204

Query: 201 YTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLKA-------------VSVIAHEIAELAT 247
           YTLPYAWVGNS KLCPGVCAYPF+VP+Y+PGLKA             +SVIAHEIAELAT
Sbjct: 205 YTLPYAWVGNSEKLCPGVCAYPFSVPKYIPGLKALKSPNGDVGVDGMISVIAHEIAELAT 264

Query: 248 NPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQLLDGEDGATYNMNGIRRRFLVQ 307
           NPLVNAWYAG DP  PVEIADLCEGIYGTGGGGSYTGQ+L   DGATYNMNGIRR+FLVQ
Sbjct: 265 NPLVNAWYAGQDPSFPVEIADLCEGIYGTGGGGSYTGQMLLDHDGATYNMNGIRRKFLVQ 324

Query: 308 WVWNHVVNYCTGPNALDQ 325
           WVWNH V+YCTGPNALDQ
Sbjct: 325 WVWNHFVSYCTGPNALDQ 342




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|16604527|gb|AAL24269.1| AT5g51550/K17N15_10 [Arabidopsis thaliana] gi|21655293|gb|AAM65358.1| AT5g51550/K17N15_10 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449460796|ref|XP_004148130.1| PREDICTED: uncharacterized protein LOC101209305 [Cucumis sativus] gi|449526565|ref|XP_004170284.1| PREDICTED: uncharacterized protein LOC101231285 [Cucumis sativus] Back     alignment and taxonomy information
>gi|15242118|ref|NP_199968.1| protein EXORDIUM like 3 [Arabidopsis thaliana] gi|16226762|gb|AAL16255.1|AF428325_1 AT5g51550/K17N15_10 [Arabidopsis thaliana] gi|9758197|dbj|BAB08671.1| unnamed protein product [Arabidopsis thaliana] gi|332008714|gb|AED96097.1| protein EXORDIUM like 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21592873|gb|AAM64823.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359490184|ref|XP_002264723.2| PREDICTED: uncharacterized protein LOC100266367 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297795963|ref|XP_002865866.1| AT5g51550/K17N15_10 [Arabidopsis lyrata subsp. lyrata] gi|297311701|gb|EFH42125.1| AT5g51550/K17N15_10 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224136774|ref|XP_002322412.1| predicted protein [Populus trichocarpa] gi|222869408|gb|EEF06539.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356545051|ref|XP_003540959.1| PREDICTED: uncharacterized protein LOC100813279 [Glycine max] Back     alignment and taxonomy information
>gi|356531708|ref|XP_003534418.1| PREDICTED: uncharacterized protein LOC100778428 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
TAIR|locus:2153087337 EXL3 "AT5G51550" [Arabidopsis 0.92 0.887 0.757 5.7e-130
TAIR|locus:2059652363 EXL5 "AT2G17230" [Arabidopsis 0.864 0.774 0.543 3.3e-86
TAIR|locus:2063399323 EXL7 "AT2G35150" [Arabidopsis 0.596 0.600 0.542 2e-77
TAIR|locus:2203314309 PHI-1 "AT1G35140" [Arabidopsis 0.796 0.838 0.318 4.7e-32
TAIR|locus:2138753314 EXO "AT4G08950" [Arabidopsis t 0.793 0.821 0.341 9.1e-29
TAIR|locus:2173428305 EXL2 "AT5G64260" [Arabidopsis 0.753 0.803 0.334 2.4e-28
TAIR|locus:2184792278 EXL4 "AT5G09440" [Arabidopsis 0.72 0.841 0.333 1.4e-23
TAIR|locus:2075482332 EXL6 "AT3G02970" [Arabidopsis 0.443 0.433 0.272 9.2e-08
TAIR|locus:2153087 EXL3 "AT5G51550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
 Identities = 237/313 (75%), Positives = 265/313 (84%)

Query:    25 WRPWPNMKHNSSEYIYGNSKKYEGSSEFVHMKYHMGPVLTANITVHPIWYGTWLKSQKRI 84
             +RP+P  K N S+ I+  SKK+EGSS  V ++YHMGPVLT NITVHPIWYGTW KSQK+I
Sbjct:    26 YRPYPP-KTNGSDQIFDASKKFEGSSNLVRLRYHMGPVLTNNITVHPIWYGTWQKSQKKI 84

Query:    85 IREFINSISAVESKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDRFYSHGKSLTRL 144
             IREFINSISAV SKHPSV+GWWKTVQLYTDQTG+NI+ TVRLG+EKNDRFYSHGKSLTRL
Sbjct:    85 IREFINSISAVGSKHPSVSGWWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTRL 144

Query:   145 SVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLP 204
             S+QSVIKS VT+RS+PLP+NPK GLYLLLT+ DVYVQDFCGQVCGFHYFTFPSIVG+TLP
Sbjct:   145 SIQSVIKSAVTSRSRPLPVNPKSGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLP 204

Query:   205 YAWVGNSAKLCPGVCAYPFAVPQYMPGLKAV-------------SVIAHEIAELATNPLV 251
             YAWVGNSAKLCPGVCAYPFAVP ++PGLK V             SVIAHEIAELATNPLV
Sbjct:   205 YAWVGNSAKLCPGVCAYPFAVPAFIPGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLV 264

Query:   252 NAWYAGPDPVAPVEIADLCEXXXXXXXXXXXXXQLLDGEDGATYNMNGIRRRFLVQWVWN 311
             NAWYAGPDPVAPVEIADLCE             Q+L+   GATYN+NGIRRR+L+QW+W+
Sbjct:   265 NAWYAGPDPVAPVEIADLCEGIYGTGGGGSYTGQMLNDHSGATYNVNGIRRRYLIQWLWS 324

Query:   312 HVVNYCTGPNALD 324
             HVV+YCTGPNALD
Sbjct:   325 HVVSYCTGPNALD 337




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0080167 "response to karrikin" evidence=IEP
GO:0009506 "plasmodesma" evidence=IDA
GO:0007020 "microtubule nucleation" evidence=RCA
TAIR|locus:2059652 EXL5 "AT2G17230" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063399 EXL7 "AT2G35150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203314 PHI-1 "AT1G35140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138753 EXO "AT4G08950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2173428 EXL2 "AT5G64260" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184792 EXL4 "AT5G09440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075482 EXL6 "AT3G02970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
pfam04674273 pfam04674, Phi_1, Phosphate-induced protein 1 cons 1e-134
>gnl|CDD|218205 pfam04674, Phi_1, Phosphate-induced protein 1 conserved region Back     alignment and domain information
 Score =  381 bits (980), Expect = e-134
 Identities = 131/283 (46%), Positives = 169/283 (59%), Gaps = 26/283 (9%)

Query: 55  MKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVESKH-PSVAGWWKTVQLYT 113
           + YHMG VL+ NI+V+ IWYG +  +Q+ IIR+F+ S+S+      PSVA WWKTV+LY 
Sbjct: 1   LTYHMGAVLSGNISVNLIWYGKFTPAQRAIIRDFLLSLSSPSPAPSPSVAAWWKTVELYY 60

Query: 114 DQTGANISRTVRLGQEKNDRFYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLL 173
           DQTGANIS ++ LG +  D  YS GKSLTRL +QS+     T          +GG+YL+L
Sbjct: 61  DQTGANISASLVLGGQVLDESYSLGKSLTRLQIQSLAAKAGT---------HRGGVYLVL 111

Query: 174 TSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGVCAYPFAVPQYMPGLK 233
           TS DV V+ FC   CGFH  TFPS+VGY   YAWVGNSA  CPG CA+PF  P Y P   
Sbjct: 112 TSPDVTVEGFCMSRCGFHGSTFPSVVGYRFAYAWVGNSATQCPGQCAWPFHQPVYGPQAP 171

Query: 234 A-------------VSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGG 280
                         V  +AH +A   TNP  N +Y G    AP+E A  C G+YG+G   
Sbjct: 172 PLVAPNGDVGVDGMVINLAHLLAGTVTNPFGNGYYQGD-ATAPLEAASACPGVYGSGAYP 230

Query: 281 SYTGQLL-DGEDGATYNMNGI-RRRFLVQWVWNHVVNYCTGPN 321
            Y GQLL D   GA+YN NG+  R++L+  +W+ V + C+   
Sbjct: 231 GYAGQLLVDAATGASYNANGVNGRKYLLPALWDPVTSACSTLV 273


Family of conserved plant proteins. Conserved region identified in a phosphate-induced protein of unknown function. Length = 273

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 325
PF04674273 Phi_1: Phosphate-induced protein 1 conserved regio 100.0
>PF04674 Phi_1: Phosphate-induced protein 1 conserved region; InterPro: IPR006766 This entry represents a family of conserved plant proteins Back     alignment and domain information
Probab=100.00  E-value=2e-117  Score=834.00  Aligned_cols=256  Identities=49%  Similarity=0.889  Sum_probs=246.4

Q ss_pred             eeecCCceecccceEEEEEeecCCchhHHHHHHHHHhcCCCC-CCCCcHhHHHHHHHHhhhccCCcceeeEEeccEEeCC
Q 041686           55 MKYHMGPVLTANITVHPIWYGTWLKSQKRIIREFINSISAVE-SKHPSVAGWWKTVQLYTDQTGANISRTVRLGQEKNDR  133 (325)
Q Consensus        55 L~YH~GpvLtg~i~V~lIWYG~ftp~QksiI~DFl~Sls~~~-~~~PsVs~WW~t~~~Y~~~~g~~vs~~v~l~~qv~D~  133 (325)
                      |+|||||||+|+|+|||||||+|+|+||+||+|||+||++++ +++|||++||+|+++|+++++++++.+|+|++|+.|+
T Consensus         1 L~YH~GplLtg~i~V~lIWYG~ftp~QkaiI~DFl~SLs~~~~~~~PSVa~WW~t~~~Y~~~~~~~~~~~v~l~~qv~D~   80 (273)
T PF04674_consen    1 LTYHGGPLLTGNINVYLIWYGRFTPAQKAIIRDFLRSLSSSAPAPSPSVAQWWKTTEKYYDQAGANVSGRVVLGGQVSDE   80 (273)
T ss_pred             CCCCCCceeecCeeEEEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhHHhhcccccccccceEEEeeEEecC
Confidence            799999999999999999999999999999999999999876 6899999999999999999999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHhhhccCCCCCCCCCCceEEEeccCCccccccccccccCccccCcccCcceeeEEEecCCCC
Q 041686          134 FYSHGKSLTRLSVQSVIKSHVTARSKPLPINPKGGLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAK  213 (325)
Q Consensus       134 ~ySlGksLt~~~i~~lv~~ai~~~~g~lP~~~~~giylVLTa~DV~V~gFC~s~CG~H~~~~~s~~~~~~~YawVGNs~~  213 (325)
                      +|||||+||++||++||++++.         ++|||||||||+||.||||||++||+|++++++.++.+++|+|||||++
T Consensus        81 ~ySlGksL~~~~i~~lv~~~~~---------~~~gvylVLTa~DV~v~gFC~~~CG~H~~~~~~~~~~~~~YawVGns~~  151 (273)
T PF04674_consen   81 NYSLGKSLSRSQIQQLVAKAIP---------DPNGVYLVLTAADVAVEGFCMSRCGFHGSTFPSSVGKRLPYAWVGNSET  151 (273)
T ss_pred             CCCCCcccCHHHHHHHHHhcCC---------CCCceEEEEecccceecccccccccCCcCCcccccccceeEEEecCccC
Confidence            9999999999999999999862         4599999999999999999999999999998888888999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCchH-------------HHHHHHHHHHhhcCccccccccCCCCCCCccccccCcccccCCCCC
Q 041686          214 LCPGVCAYPFAVPQYMPGLKA-------------VSVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGTGGGG  280 (325)
Q Consensus       214 qCPg~CAwPF~~P~ygP~~~p-------------vi~iA~~LAgavTNPf~ngwyqG~~~~aplEaadaC~giyG~Gayp  280 (325)
                      ||||+||||||+|.||||.+|             ||||||||||++||||+||||||+ ++||+||+|+|+||||+||||
T Consensus       152 qCPg~CAwPf~~p~ygp~~~~l~~PNgDvGvDGMvi~iA~~LA~~~TNP~~~g~yqg~-~~aplEaa~aC~giyG~Gayp  230 (273)
T PF04674_consen  152 QCPGQCAWPFHQPIYGPQGPPLVPPNGDVGVDGMVINIAHELAGAVTNPFGNGYYQGD-ATAPLEAADACAGIYGSGAYP  230 (273)
T ss_pred             CCCCCCCCCCcccccCCCCCCccCCCCCcchhhHHHHHHHHHHHhhcCccccccccCC-CCCccchhhhccccccCCCCC
Confidence            999999999999999999655             999999999999999999999985 799999999999999999999


Q ss_pred             CCccceeeC-CCCcccccCCCC-ceeeeeccccCCCCCccCC
Q 041686          281 SYTGQLLDG-EDGATYNMNGIR-RRFLVQWVWNHVVNYCTGP  320 (325)
Q Consensus       281 GY~G~llvD-~~GASYNa~G~~-RkfLlpa~WdP~t~sC~~p  320 (325)
                      ||+|+|++| .+|||||++|+| |||||||||||+|++|+|+
T Consensus       231 gy~G~l~vD~~tGaSyN~~G~~gRkfLlpa~wdP~t~~C~t~  272 (273)
T PF04674_consen  231 GYPGQLLVDPATGASYNANGVNGRKFLLPALWDPETSSCSTL  272 (273)
T ss_pred             CCCcceeecCCCCceeeccccCCceEEeecccCCCcCccccc
Confidence            999999999 579999999999 9999999999999999987



A conserved region in these proteins was identified in a phosphate-induced protein of unknown function [].


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.3 bits (101), Expect = 9e-05
 Identities = 47/325 (14%), Positives = 83/325 (25%), Gaps = 126/325 (38%)

Query: 3   PVTVVLSLTLLTILLTVSPSIAWR----------PW-----------PNMKHNSSEYIYG 41
              V  +L L   LL+    +  +           +           P+M   +  YI  
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM--MTRMYIEQ 115

Query: 42  NSKKYEGSSEFVHMKYHMG---PVLT-----------ANITVHPIWYG------TWLKSQ 81
             + Y  +  F   KY++    P L             N+ +     G      TW+   
Sbjct: 116 RDRLYNDNQVFA--KYNVSRLQPYLKLRQALLELRPAKNVLID----GVLGSGKTWVALD 169

Query: 82  ----KRIIREFINSISAVESKHPSVAGWWKTV--------------QLYTD-----QTGA 118
                ++  +    I            +W  +              +L         + +
Sbjct: 170 VCLSYKVQCKMDFKI------------FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 119 NISRTVRL----GQEKNDRFYS---HGKSLTRLS-VQSVIKSHVTA---RSKPLPINPKG 167
           + S  ++L     Q +  R      +   L  L  VQ+       A     K        
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN--AKAWNAFNLSCK-------- 267

Query: 168 GLYLLLTSTDVYVQDFCGQVCGFHYFTFPSIVGYTLPYA------WVGNSA-KLCPGVCA 220
              +LLT+    V DF       H       +  T          ++      L   V  
Sbjct: 268 ---ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 221 -YPFAVPQYMPGLKAVSVIAHEIAE 244
             P            +S+IA  I +
Sbjct: 325 TNPR----------RLSIIAESIRD 339


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00