Citrus Sinensis ID: 041772


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDSTPLSAKIGVSVEDLTSLPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDPEYLKGFAL
cEEEEcccccccccccccccccccEEEEEcccccccccccccEEEEEEccccccccccEEEEEEEcccccEEEEEEEccccccEEEEccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEHHHHHHHHHHHHHHHHccccccccccc
ccEEEEcccccccccccccccccccEEEEcccccccccccccEEEEEEccccccccccEEEEEEEccccccEEEEEEccccccEEEEEcccccccccccccccccccEEEEEEEEccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHccc
mfgvvfpnrsfpmdistfsqiDTFHWILDMNSFVGEAYDQVRDMCIFLLnnftlppdkaLAVYiqspgspflycgavtvarpsavlslpwpepgggmqltapdstplsakigvsvedltslpsldvTAEKRIERLAMKVGENLFNFMQSfcgvdgsklivpMDILDRWFKKFQEKAkrdpeylkgfal
mfgvvfpnrsfpmdiSTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDSTPLSAKIGvsvedltslpsldvtAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFqekakrdpeylkgfal
MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDSTPLSAKIGVSVEDLTSLPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDPEYLKGFAL
***VVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSLPW*********************GVSVEDLTSLPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQ***************
MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSL******************LSAKIGVSV********************AMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDPEYLKGFAL
MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDSTPLSAKIGVSVEDLTSLPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDPEYLKGFAL
MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDSTPLSAKIGVSVEDLTSLPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDPEYLKGFAL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDSTPLSAKIGVSVEDLTSLPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDPEYLKGFAL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query188 2.2.26 [Sep-21-2011]
O60175200 Protein OPI10 homolog OS= yes no 0.904 0.85 0.241 1e-09
Q568T4197 Protein Hikeshi OS=Danio yes no 0.776 0.741 0.273 2e-09
Q5M808197 Protein Hikeshi OS=Rattus yes no 0.781 0.746 0.263 8e-09
Q9DD02197 Protein Hikeshi OS=Mus mu yes no 0.781 0.746 0.263 8e-09
Q56JY0197 Protein Hikeshi OS=Bos ta yes no 0.781 0.746 0.251 2e-08
Q53FT3197 Protein Hikeshi OS=Homo s yes no 0.781 0.746 0.251 3e-08
Q5ZK09197 Protein Hikeshi OS=Gallus yes no 0.776 0.741 0.25 5e-08
A4IGP0197 Protein Hikeshi OS=Xenopu yes no 0.776 0.741 0.25 7e-08
Q6DCU7197 Protein Hikeshi OS=Xenopu N/A no 0.776 0.741 0.244 2e-07
Q16RI1199 Protein OPI10 homolog OS= N/A no 0.925 0.874 0.256 1e-05
>sp|O60175|OPI10_SCHPO Protein OPI10 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21H7.06c PE=3 SV=1 Back     alignment and function desciption
 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 37/207 (17%)

Query: 1   MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKAL 60
           MFG +   R   +  +   Q+    ++  ++S      + +  + +FLL N   P     
Sbjct: 1   MFGAICAGR---LVQTNLQQVADNQFVFQLDS-----AESLNHIVVFLLPNSPFPVGMGA 52

Query: 61  AVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDST--PLSAKIGVSVEDL 118
            VY Q PG PF + G +T  +PSA+  L        +Q  + +     ++A +G+SVE L
Sbjct: 53  KVYFQWPGKPFQFLGYLTNEKPSAIFRL-----KNTIQTLSENENCVGITAMLGISVEPL 107

Query: 119 TSL---PSLDVTAEKRIER-------LAMKVGENLFNFMQSFCG------------VDGS 156
           T+    P++  +A   I +       +A K+  NL+NF+ SF              +  +
Sbjct: 108 TNFTETPAVSTSASNVIAKPLPPVTSVAQKILTNLYNFLASFATSQLPPNSIGLGDLRPN 167

Query: 157 KLIVPMDILDRWFKKFQEKAKRDPEYL 183
              +P+ +   W  KF  K   +P +L
Sbjct: 168 DTFIPLRVFQDWHAKFLNKLSNNPNFL 194





Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|Q568T4|HIKES_DANRE Protein Hikeshi OS=Danio rerio GN=zgc:110091 PE=2 SV=2 Back     alignment and function description
>sp|Q5M808|HIKES_RAT Protein Hikeshi OS=Rattus norvegicus PE=2 SV=2 Back     alignment and function description
>sp|Q9DD02|HIKES_MOUSE Protein Hikeshi OS=Mus musculus GN=L7rn6 PE=2 SV=1 Back     alignment and function description
>sp|Q56JY0|HIKES_BOVIN Protein Hikeshi OS=Bos taurus PE=2 SV=1 Back     alignment and function description
>sp|Q53FT3|HIKES_HUMAN Protein Hikeshi OS=Homo sapiens GN=C11orf73 PE=1 SV=2 Back     alignment and function description
>sp|Q5ZK09|HIKES_CHICK Protein Hikeshi OS=Gallus gallus GN=RCJMB04_13p7 PE=2 SV=2 Back     alignment and function description
>sp|A4IGP0|HIKES_XENTR Protein Hikeshi OS=Xenopus tropicalis PE=2 SV=1 Back     alignment and function description
>sp|Q6DCU7|HIKES_XENLA Protein Hikeshi OS=Xenopus laevis PE=2 SV=1 Back     alignment and function description
>sp|Q16RI1|OPI10_AEDAE Protein OPI10 homolog OS=Aedes aegypti GN=AAEL010953 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query188
449455787188 PREDICTED: protein OPI10 homolog [Cucumi 1.0 1.0 0.909 3e-97
255564158188 conserved hypothetical protein [Ricinus 1.0 1.0 0.893 2e-96
225430602190 PREDICTED: uncharacterized protein C11or 1.0 0.989 0.873 9e-94
357491821190 OPI10-like protein [Medicago truncatula] 0.994 0.984 0.874 2e-92
356499069189 PREDICTED: uncharacterized protein C11or 0.989 0.984 0.873 4e-92
356553255189 PREDICTED: uncharacterized protein C11or 0.994 0.989 0.863 5e-92
297841197190 hypothetical protein ARALYDRAFT_475712 [ 1.0 0.989 0.836 1e-90
224077378188 predicted protein [Populus trichocarpa] 1.0 1.0 0.840 2e-90
15218916190 uncharacterized protein [Arabidopsis tha 1.0 0.989 0.831 4e-90
116791331187 unknown [Picea sitchensis] 0.994 1.0 0.760 2e-82
>gi|449455787|ref|XP_004145632.1| PREDICTED: protein OPI10 homolog [Cucumis sativus] gi|449484530|ref|XP_004156908.1| PREDICTED: protein OPI10 homolog [Cucumis sativus] Back     alignment and taxonomy information
 Score =  359 bits (922), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 171/188 (90%), Positives = 180/188 (95%)

Query: 1   MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKAL 60
           MFGVVFPNRSFPMDIS FSQIDTFHW+LDMN+FVGEAYDQ+R++CIFLLNNFTLPPDKAL
Sbjct: 1   MFGVVFPNRSFPMDISAFSQIDTFHWVLDMNTFVGEAYDQIREICIFLLNNFTLPPDKAL 60

Query: 61  AVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGGMQLTAPDSTPLSAKIGVSVEDLTS 120
           AVYIQSPGSPFL+CGAVT+ARPSAVLSLPWPEPGG MQL  PDS PLSAKIGVSV+DL S
Sbjct: 61  AVYIQSPGSPFLFCGAVTLARPSAVLSLPWPEPGGQMQLMPPDSAPLSAKIGVSVQDLAS 120

Query: 121 LPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDP 180
           L SLDVTAEKRIERLA+KVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDP
Sbjct: 121 LQSLDVTAEKRIERLALKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKRDP 180

Query: 181 EYLKGFAL 188
           EYLKGF L
Sbjct: 181 EYLKGFVL 188




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564158|ref|XP_002523076.1| conserved hypothetical protein [Ricinus communis] gi|223537638|gb|EEF39261.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|225430602|ref|XP_002265803.1| PREDICTED: uncharacterized protein C11orf73 homolog [Vitis vinifera] gi|147800174|emb|CAN77663.1| hypothetical protein VITISV_027383 [Vitis vinifera] gi|239056165|emb|CAQ58596.1| Unknown gene [Vitis vinifera] gi|296085140|emb|CBI28635.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357491821|ref|XP_003616198.1| OPI10-like protein [Medicago truncatula] gi|355517533|gb|AES99156.1| OPI10-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356499069|ref|XP_003518366.1| PREDICTED: uncharacterized protein C11orf73 homolog [Glycine max] Back     alignment and taxonomy information
>gi|356553255|ref|XP_003544973.1| PREDICTED: uncharacterized protein C11orf73 homolog [Glycine max] Back     alignment and taxonomy information
>gi|297841197|ref|XP_002888480.1| hypothetical protein ARALYDRAFT_475712 [Arabidopsis lyrata subsp. lyrata] gi|297334321|gb|EFH64739.1| hypothetical protein ARALYDRAFT_475712 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224077378|ref|XP_002305236.1| predicted protein [Populus trichocarpa] gi|118484954|gb|ABK94342.1| unknown [Populus trichocarpa] gi|222848200|gb|EEE85747.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15218916|ref|NP_176782.1| uncharacterized protein [Arabidopsis thaliana] gi|12322612|gb|AAG51306.1|AC026480_13 hypothetical protein [Arabidopsis thaliana] gi|33589792|gb|AAQ22662.1| At1g66080 [Arabidopsis thaliana] gi|110738834|dbj|BAF01340.1| hypothetical protein [Arabidopsis thaliana] gi|332196339|gb|AEE34460.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|116791331|gb|ABK25938.1| unknown [Picea sitchensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query188
TAIR|locus:2013855190 AT1G66080 "AT1G66080" [Arabido 1.0 0.989 0.831 3.4e-84
UNIPROTKB|G4MSN6202 MGG_07078 "Uncharacterized pro 0.718 0.668 0.308 9.4e-11
POMBASE|SPBC21H7.06c200 SPBC21H7.06c "inositol metabol 0.611 0.575 0.298 1.5e-07
ZFIN|ZDB-GENE-050417-34197 zgc:110091 "zgc:110091" [Danio 0.617 0.588 0.268 9.7e-06
MGI|MGI:96738197 l7Rn6 "lethal, Chr 7, Rinchik 0.585 0.558 0.293 1.9e-05
RGD|1359455197 l7Rn6 "lethal, Chr 7, Rinchik 0.585 0.558 0.293 1.9e-05
ASPGD|ASPL0000052979217 AN10034 [Emericella nidulans ( 0.595 0.516 0.3 5e-05
UNIPROTKB|Q5ZK09197 RCJMB04_13p7 "Protein Hikeshi" 0.579 0.553 0.275 6.5e-05
UNIPROTKB|Q53FT3197 C11orf73 "Protein Hikeshi" [Ho 0.585 0.558 0.277 8.7e-05
UNIPROTKB|Q56JY0197 Q56JY0 "Protein Hikeshi" [Bos 0.585 0.558 0.277 0.00012
TAIR|locus:2013855 AT1G66080 "AT1G66080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
 Identities = 158/190 (83%), Positives = 175/190 (92%)

Query:     1 MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKAL 60
             MFGVVFPNRSFP+DISTF+QIDTFHW+LDMN FVGEAYDQ+ +MCIFLLNNF LPPDKAL
Sbjct:     1 MFGVVFPNRSFPIDISTFTQIDTFHWVLDMNHFVGEAYDQISEMCIFLLNNFNLPPDKAL 60

Query:    61 AVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEPGGG--MQLTAPDSTPLSAKIGVSVEDL 118
             AVY+QSPGS F++CGAVT+ARPSAVLSL WPEPG    MQLTA DS+ LSAKIGVSVED+
Sbjct:    61 AVYVQSPGSAFVFCGAVTLARPSAVLSLQWPEPGSAAKMQLTAGDSSSLSAKIGVSVEDV 120

Query:   119 TSLPSLDVTAEKRIERLAMKVGENLFNFMQSFCGVDGSKLIVPMDILDRWFKKFQEKAKR 178
              +L SLDV AE+RIE+LAMKVGENLFNFMQSFCGVDGSKL+VPMDILDRWFKKFQEKAKR
Sbjct:   121 AALRSLDVVAERRIEKLAMKVGENLFNFMQSFCGVDGSKLVVPMDILDRWFKKFQEKAKR 180

Query:   179 DPEYLKGFAL 188
             DP++LK FAL
Sbjct:   181 DPDFLKSFAL 190




GO:0003674 "molecular_function" evidence=ND
GO:0005737 "cytoplasm" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005829 "cytosol" evidence=IDA
GO:0006457 "protein folding" evidence=RCA
GO:0009408 "response to heat" evidence=RCA
GO:0009644 "response to high light intensity" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042542 "response to hydrogen peroxide" evidence=RCA
UNIPROTKB|G4MSN6 MGG_07078 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
POMBASE|SPBC21H7.06c SPBC21H7.06c "inositol metabolism protein Opi10 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-34 zgc:110091 "zgc:110091" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:96738 l7Rn6 "lethal, Chr 7, Rinchik 6" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1359455 l7Rn6 "lethal, Chr 7, Rinchik 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ASPGD|ASPL0000052979 AN10034 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZK09 RCJMB04_13p7 "Protein Hikeshi" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q53FT3 C11orf73 "Protein Hikeshi" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q56JY0 Q56JY0 "Protein Hikeshi" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
pfam05603193 pfam05603, DUF775, Protein of unknown function (DU 1e-53
>gnl|CDD|218653 pfam05603, DUF775, Protein of unknown function (DUF775) Back     alignment and domain information
 Score =  169 bits (429), Expect = 1e-53
 Identities = 65/203 (32%), Positives = 96/203 (47%), Gaps = 30/203 (14%)

Query: 1   MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKAL 60
           MFG + P R    D     Q+D   ++ D+ +      + +  + +FLL N  LPP  A 
Sbjct: 1   MFGAIVPGRPVQTD---AQQVDPTKFVFDLPN-----AESISHIVVFLLPNVPLPPGTAA 52

Query: 61  AVYIQSPGSPFLYCGAVTVARPSAVLSLPWPEP-GGGMQLTAPDSTPLSAKIGVSVEDLT 119
           AVY Q PG  F   GA+T A+PSA+  +   +    G   T    +   A+IG+S+E L 
Sbjct: 53  AVYFQLPGPEFKLLGALTNAKPSAIFKVSNIDMLDDGNPATGNPQST--AQIGISIEPLD 110

Query: 120 SLPSLDVTAEK-----------------RIERLAMKVGENLFNFMQSFCGVD--GSKLIV 160
            L       ++                   ++LA K+ ENLFNF+ SF G D   S+ +V
Sbjct: 111 QLAQQLAALKQSQSGSQAAQQNAQVTSVSTKQLAQKIVENLFNFLSSFAGSDSLPSEGVV 170

Query: 161 PMDILDRWFKKFQEKAKRDPEYL 183
           P+   D+W+ KFQ K   DP +L
Sbjct: 171 PLKAFDKWWDKFQRKLANDPNFL 193


This family consists of several eukaryotic proteins of unknown function. Length = 193

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 188
PF05603202 DUF775: Protein of unknown function (DUF775); Inte 100.0
KOG4067195 consensus Uncharacterized conserved protein [Funct 100.0
>PF05603 DUF775: Protein of unknown function (DUF775); InterPro: IPR008493 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=1.1e-69  Score=452.37  Aligned_cols=175  Identities=34%  Similarity=0.706  Sum_probs=153.0

Q ss_pred             CeEEEcCCCCcCcccCcceeeCCceEEEEccCCccCCCCCcceEEEEecCCCCCCCCceEEEEEEcC--CCCceEeeeec
Q 041772            1 MFGVVFPNRSFPMDISTFSQIDTFHWILDMNSFVGEAYDQVRDMCIFLLNNFTLPPDKALAVYIQSP--GSPFLYCGAVT   78 (188)
Q Consensus         1 MFG~iv~Grp~~~~~t~f~qv~~~~~~~~l~~~~~~~~~~v~hivVFLl~~~~~p~g~~a~VY~~~P--~~~w~~LG~is   78 (188)
                      |||||+||||   ++|+++|+|+|||++++     +++++||||||||||++||||||||+|||+||  +++|||||+|+
T Consensus         1 MFGviv~Grp---v~t~~~~v~~t~f~~~l-----~~~~~v~hivVFLl~~~p~P~g~aa~VY~~~P~~~~~w~~LG~Is   72 (202)
T PF05603_consen    1 MFGVIVPGRP---VQTDFQQVDETKFVFDL-----PNADSVNHIVVFLLPNVPFPPGYAAAVYFQWPAGGPEWQLLGAIS   72 (202)
T ss_pred             CeEEEeCCCc---ccccceEcCCCEEEEEC-----CCCCCCCEEEEEECCCCCCCcceeEEEEEEcCCCCCCeEEecccc
Confidence            9999999995   57999999999999999     78999999999999999999999999999999  77999999999


Q ss_pred             CCCCceEEECCCCCCCCCCc-ccCCCCCCceeEEEEeeccccccccccccc----------------------hhHHHHH
Q 041772           79 VARPSAVLSLPWPEPGGGMQ-LTAPDSTPLSAKIGVSVEDLTSLPSLDVTA----------------------EKRIERL  135 (188)
Q Consensus        79 n~KPSaIFk~~~~~~~~~~~-~~~~~~~~~~~~IGISiEpl~~i~~~~~~~----------------------~~~~~~~  135 (188)
                      |+||||||||+|++...... .........+|+|||||||+++++++.+..                      ..++++|
T Consensus        73 n~KPSAIFki~~~~~~~~~~~~~~~~~~~~~a~IGISiEp~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (202)
T PF05603_consen   73 NEKPSAIFKISWPEDDMLDSGSPSSNNSSGTAQIGISIEPLAQIAQQLAALKAQQSSQSSSAMSSSSSSSAQSPDSTKEF  152 (202)
T ss_pred             CCCCceEEEcCCcccccccccCcccCCCCceEEEEEeeCcHHHHHHHHHhhhccccccccccccccccccccccccHHHH
Confidence            99999999999953321111 001125568999999999999998753221                      1378999


Q ss_pred             HHHHHHHHhhhhcccccCC--CCeeEEehHHHHHHHHHHHHHHhcCcccc
Q 041772          136 AMKVGENLFNFMQSFCGVD--GSKLIVPMDILDRWFKKFQEKAKRDPEYL  183 (188)
Q Consensus       136 A~ki~~nlfNyl~SF~~~~--~~~~~VP~~~~~~W~~kF~~Kl~~dP~Fl  183 (188)
                      |+||++||||||+||++++  +++++||+++||+||+|||+||++||+||
T Consensus       153 A~ki~~NlfNyl~SF~~~~~~~~~~~VP~~~~~~W~~kFe~Kl~~dP~Fl  202 (202)
T PF05603_consen  153 AQKIAENLFNYLSSFSGSQPQGGEEVVPLSVFDKWWEKFERKLRNDPNFL  202 (202)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCCceEEeHHHHHHHHHHHHHHHhcCCCCC
Confidence            9999999999999999985  57899999999999999999999999998



>KOG4067 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query188
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 3e-04
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)

Query: 95  GGMQLTAPDSTPLSAKIGVSVE 116
             ++L A DS P  A I  ++E
Sbjct: 27  ASLKLYADDSAPALA-IKATME 47


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00