Citrus Sinensis ID: 041827

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
PDIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHEEEHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
PDIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWlssswkckGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK
Flexible Loop (DISEMBL)
PDIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK
Low Complexity Region (SEG)
PDIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK
Disordered region (IsUnstruct)
***PAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK*******
Disordered Region (DISOPRED)
**IPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKK***
Disordered Region (DISEMBL)
PDIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK
Disordered Region (DISPRO)
PDIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQ**
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
PDIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	138	2.2.26 [Sep-21-2011]
Q5XF09	308	Probable sugar phosphate/	yes	no	0.971	0.435	0.666	2e-44
Q6DBP3	309	Probable sugar phosphate/	yes	no	0.971	0.433	0.638	4e-42
Q9FYE5	309	Probable sugar phosphate/	no	no	0.963	0.430	0.478	2e-28
Q9SS40	355	Probable sugar phosphate/	no	no	0.956	0.371	0.453	3e-27
Q9LDH3	361	Probable sugar phosphate/	no	no	0.956	0.365	0.460	6e-26

>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1

 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 112/141 (79%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIMEK+VVGITIALA+ D 
Sbjct: 168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDF 227

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
             +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 228 RIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 287

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT+ GVILY EAKK+SK
Sbjct: 288 LGYSLTVCGVILYSEAKKRSK 308

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score =  169 bits (428), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/141 (63%), Positives = 110/141 (78%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A + L+PA LIMEK+VVGITIALA+ D 
Sbjct: 168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDF 227

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
             +WYL+FNS+LAY V LTNFL   HT  + L      KGA+AVVVSILIF+N V +TGM
Sbjct: 228 RIVWYLLFNSALAYLVNLTNFLVTNHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGM 287

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT+ GVILY EAKK++K
Sbjct: 288 LGYSLTVCGVILYSEAKKRNK 308

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 98/142 (69%), Gaps = 9/142 (6%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A A ++VLQGILLS    K+NSMNL++YM+P+A I L+P  L ME DV+ +T+ LAKQ  
Sbjct: 169 ARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQH- 227

Query: 61  EFLWYLIF-NSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
           +++W L+  NS +AY   L NFL   HT  + L      KGA+AVV+SILIF+N V + G
Sbjct: 228 QYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPVTVMG 287

Query: 117 MSGYTLTIIGVILYKEAKKQSK 138
           + GY++T++GV+ Y E K++ +
Sbjct: 288 IGGYSITVLGVVAYGETKRRFR 309

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 92/139 (66%), Gaps = 7/139 (5%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A A ++VLQGILLS    ++NSMNL++YM+P+A I L+P  + ME DV+ +T+ L +Q  
Sbjct: 215 ARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHK 274

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
                L+ NS +AY   L NFL   HT  + L      KGA+AVV+SIL+FRN V + G+
Sbjct: 275 YMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVMGI 334

Query: 118 SGYTLTIIGVILYKEAKKQ 136
            GY++T++GV+ Y E K++
Sbjct: 335 GGYSITVLGVVAYGETKRR 353

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 96/139 (69%), Gaps = 7/139 (5%)

Query: 7   ALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEF 62
           AL++V+QGI+L+    K++SMNLL+YMAP+AA  L+P  L +E +V+ + I  A+ D   
Sbjct: 218 ALKSVVQGIILTSESEKLHSMNLLLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLI 277

Query: 63  LWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSG 119
           ++ L  N+++AY V LTNFL   HT  + L      K A+A  VS+LIFRN V + G++G
Sbjct: 278 IFLLAGNATVAYLVNLTNFLVTKHTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAG 337

Query: 120 YTLTIIGVILYKEAKKQSK 138
           + +TI+GV+LY EA+K+SK
Sbjct: 338 FGVTIMGVVLYSEARKRSK 356

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
356551544	306	PREDICTED: probable sugar phosphate/phos	0.971	0.437	0.652	7e-43
224112607	306	predicted protein [Populus trichocarpa]	0.971	0.437	0.659	7e-43
79397740	308	nucleotide-sugar transporter-like protei	0.971	0.435	0.666	1e-42
297833916	308	organic anion transporter [Arabidopsis l	0.971	0.435	0.666	1e-42
296086106	231	unnamed protein product [Vitis vinifera]	0.971	0.580	0.645	1e-42
255579120	244	Glucose-6-phosphate/phosphate translocat	0.971	0.549	0.645	2e-42
388515075	185	unknown [Lotus japonicus]	0.971	0.724	0.652	2e-42
12321869	344	integral membrane protein, putative; 857	0.971	0.389	0.666	2e-42
363807844	306	uncharacterized protein LOC100817995 [Gl	0.971	0.437	0.645	2e-42
61651608	306	plastidic phosphate translocator-like pr	0.971	0.437	0.645	4e-42

>gi|356551544|ref|XP_003544134.1| PREDICTED: probable sugar phosphate/phosphate translocator At3g11320-like [Glycine max]

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 115/141 (81%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIME++VVGIT+ALA+ DV
Sbjct: 166 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDV 225

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
           + +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 226 KIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 285

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT++GV+LY EAKK+SK
Sbjct: 286 MGYSLTVLGVVLYSEAKKRSK 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112607|ref|XP_002316239.1| predicted protein [Populus trichocarpa] gi|222865279|gb|EEF02410.1| predicted protein [Populus trichocarpa]

 Score =  178 bits (451), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 93/141 (65%), Positives = 114/141 (80%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIME++VVGIT+ALA+ DV
Sbjct: 166 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDV 225

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
           + +WYL+FNSSLAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 226 KIIWYLLFNSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 285

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT+ GV+LY EAKK+SK
Sbjct: 286 LGYSLTVFGVVLYSEAKKRSK 306

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79397740|ref|NP_187740.2| nucleotide-sugar transporter-like protein [Arabidopsis thaliana] gi|75110965|sp|Q5XF09.1|PT311_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At3g11320 gi|53828521|gb|AAU94370.1| At3g11320 [Arabidopsis thaliana] gi|110735735|dbj|BAE99847.1| hypothetical protein [Arabidopsis thaliana] gi|332641508|gb|AEE75029.1| nucleotide-sugar transporter-like protein [Arabidopsis thaliana] gi|385137878|gb|AFI41200.1| putative nucleotide-sugar transporter, partial [Arabidopsis thaliana]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 112/141 (79%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIMEK+VVGITIALA+ D 
Sbjct: 168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDF 227

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
             +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 228 RIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 287

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT+ GVILY EAKK+SK
Sbjct: 288 LGYSLTVCGVILYSEAKKRSK 308

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833916|ref|XP_002884840.1| organic anion transporter [Arabidopsis lyrata subsp. lyrata] gi|297330680|gb|EFH61099.1| organic anion transporter [Arabidopsis lyrata subsp. lyrata]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 112/141 (79%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIMEK+VVGITIALA+ D 
Sbjct: 168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDF 227

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
             +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 228 RIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 287

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT+ GVILY EAKK+SK
Sbjct: 288 LGYSLTVCGVILYSEAKKRSK 308

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296086106|emb|CBI31547.3| unnamed protein product [Vitis vinifera]

 Score =  177 bits (448), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/141 (64%), Positives = 113/141 (80%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA L ME++VVGIT+ALA+ D+
Sbjct: 91  ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLFMEENVVGITLALARDDI 150

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
           + +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 151 KIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 210

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT+ GVILY EAKK+SK
Sbjct: 211 LGYSLTVFGVILYSEAKKRSK 231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579120|ref|XP_002530408.1| Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor, putative [Ricinus communis] gi|223530057|gb|EEF31978.1| Glucose-6-phosphate/phosphate translocator 1, chloroplast precursor, putative [Ricinus communis]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/141 (64%), Positives = 114/141 (80%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIME +VVGIT+ALA+ ++
Sbjct: 104 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEDNVVGITLALARDNI 163

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
           + +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 164 KIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 223

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT++GVILY EAKK+SK
Sbjct: 224 LGYSLTVMGVILYSEAKKRSK 244

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515075|gb|AFK45599.1| unknown [Lotus japonicus]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 113/141 (80%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIME++VVGIT+ALA+ DV
Sbjct: 45  ARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDV 104

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
           + +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIF+N V +TGM
Sbjct: 105 KIIWYLLFNSTLAYFVHLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGM 164

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY LT+ GVILY EAKK+SK
Sbjct: 165 MGYALTVFGVILYSEAKKRSK 185

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12321869|gb|AAG50965.1|AC073395_7 integral membrane protein, putative; 85705-84183 [Arabidopsis thaliana]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 112/141 (79%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIMEK+VVGITIALA+ D 
Sbjct: 204 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDF 263

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
             +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 264 RIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 323

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT+ GVILY EAKK+SK
Sbjct: 324 LGYSLTVCGVILYSEAKKRSK 344

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807844|ref|NP_001242185.1| uncharacterized protein LOC100817995 [Glycine max] gi|255635088|gb|ACU17902.1| unknown [Glycine max]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/141 (64%), Positives = 115/141 (81%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIME++VVGIT+ALA+ DV
Sbjct: 166 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEENVVGITLALARDDV 225

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
           + +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct: 226 KIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 285

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT++GV+LY +AKK+SK
Sbjct: 286 MGYSLTVLGVVLYSQAKKRSK 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|61651608|dbj|BAD91177.1| plastidic phosphate translocator-like protein2 [Mesembryanthemum crystallinum]

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/141 (64%), Positives = 115/141 (81%), Gaps = 7/141 (4%)

Query: 5   AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
           A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA L ME++VVGIT+ALA++DV
Sbjct: 166 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLFMEENVVGITLALAREDV 225

Query: 61  EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
           + +WYLIFNS+LAYFV LTNFL   HT  + L      KGA+AVVVSI+IF+N V +TGM
Sbjct: 226 KIVWYLIFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSIMIFKNPVSVTGM 285

Query: 118 SGYTLTIIGVILYKEAKKQSK 138
            GY+LT++GVILY EAKK+SK
Sbjct: 286 LGYSLTVLGVILYSEAKKRSK 306

Source: Mesembryanthemum crystallinum

Species: Mesembryanthemum crystallinum

Genus: Mesembryanthemum

Family: Aizoaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
TAIR|locus:2074713	308	AT3G11320 [Arabidopsis thalian	0.971	0.435	0.666	5.2e-42
TAIR|locus:2166384	309	AT5G05820 [Arabidopsis thalian	0.971	0.433	0.638	4.2e-40
TAIR|locus:2146683	309	AT5G04160 "AT5G04160" [Arabido	0.949	0.423	0.485	4.4e-29
TAIR|locus:2076239	355	AT3G10290 [Arabidopsis thalian	0.956	0.371	0.453	7.3e-27
TAIR|locus:2034730	361	AT1G12500 [Arabidopsis thalian	0.956	0.365	0.460	2.9e-25
DICTYBASE|DDB_G0287319	348	DDB_G0287319 "TPT transporter	0.949	0.376	0.255	6.3e-08
TAIR|locus:2204690	336	AT1G77610 [Arabidopsis thalian	0.891	0.366	0.328	1.2e-06
TAIR|locus:2093596	375	AT3G17430 [Arabidopsis thalian	0.891	0.328	0.285	3.2e-06
TAIR|locus:2007745	367	AT1G48230 [Arabidopsis thalian	0.891	0.335	0.285	3.9e-06
TAIR|locus:2201138	341	GONST5 "golgi nucleotide sugar	0.898	0.363	0.300	9.3e-06

TAIR|locus:2074713 AT3G11320 [Arabidopsis thaliana (taxid:3702)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 94/141 (66%), Positives = 112/141 (79%)

Query:     5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
             A AL++VLQGILLS    K+NSMNLL+YMAP+A +FL+PA LIMEK+VVGITIALA+ D 
Sbjct:   168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDF 227

Query:    61 EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
               +WYL+FNS+LAYFV LTNFL   HT  + L      KGA+AVVVSILIFRN V +TGM
Sbjct:   228 RIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 287

Query:   118 SGYTLTIIGVILYKEAKKQSK 138
              GY+LT+ GVILY EAKK+SK
Sbjct:   288 LGYSLTVCGVILYSEAKKRSK 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2166384 AT5G05820 [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 90/141 (63%), Positives = 110/141 (78%)

Query:     5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
             A AL++VLQGILLS    K+NSMNLL+YMAP+A + L+PA LIMEK+VVGITIALA+ D 
Sbjct:   168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDF 227

Query:    61 EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
               +WYL+FNS+LAY V LTNFL   HT  + L      KGA+AVVVSILIF+N V +TGM
Sbjct:   228 RIVWYLLFNSALAYLVNLTNFLVTNHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGM 287

Query:   118 SGYTLTIIGVILYKEAKKQSK 138
              GY+LT+ GVILY EAKK++K
Sbjct:   288 LGYSLTVCGVILYSEAKKRNK 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2146683 AT5G04160 "AT5G04160" [Arabidopsis thaliana (taxid:3702)]

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 68/140 (48%), Positives = 97/140 (69%)

Query:     5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
             A A ++VLQGILLS    K+NSMNL++YM+P+A I L+P  L ME DV+ +T+ LAKQ  
Sbjct:   169 ARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQH- 227

Query:    61 EFLWYLIF-NSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
             +++W L+  NS +AY   L NFL   HT  + L      KGA+AVV+SILIF+N V + G
Sbjct:   228 QYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPVTVMG 287

Query:   117 MSGYTLTIIGVILYKEAKKQ 136
             + GY++T++GV+ Y E K++
Sbjct:   288 IGGYSITVLGVVAYGETKRR 307

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2076239 AT3G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 63/139 (45%), Positives = 92/139 (66%)

Query:     5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
             A A ++VLQGILLS    ++NSMNL++YM+P+A I L+P  + ME DV+ +T+ L +Q  
Sbjct:   215 ARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHK 274

Query:    61 EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
                  L+ NS +AY   L NFL   HT  + L      KGA+AVV+SIL+FRN V + G+
Sbjct:   275 YMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVMGI 334

Query:   118 SGYTLTIIGVILYKEAKKQ 136
              GY++T++GV+ Y E K++
Sbjct:   335 GGYSITVLGVVAYGETKRR 353

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

TAIR|locus:2034730 AT1G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 64/139 (46%), Positives = 96/139 (69%)

Query:     7 ALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEF 62
             AL++V+QGI+L+    K++SMNLL+YMAP+AA  L+P  L +E +V+ + I  A+ D   
Sbjct:   218 ALKSVVQGIILTSESEKLHSMNLLLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLI 277

Query:    63 LWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSG 119
             ++ L  N+++AY V LTNFL   HT  + L      K A+A  VS+LIFRN V + G++G
Sbjct:   278 IFLLAGNATVAYLVNLTNFLVTKHTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAG 337

Query:   120 YTLTIIGVILYKEAKKQSK 138
             + +TI+GV+LY EA+K+SK
Sbjct:   338 FGVTIMGVVLYSEARKRSK 356

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

DICTYBASE|DDB_G0287319 DDB_G0287319 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 130 (50.8 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 35/137 (25%), Positives = 71/137 (51%)

Query:     7 ALRTVLQGILLSK-VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWY 65
             A+  ++ G++L++ +N++NLL YM+P++   L P    ME + +     L  +    +  
Sbjct:   183 AVFAIVSGLILTQQMNAVNLLYYMSPISCCLLFPLSAFMEWNAIANEWPLYGESKPIV-I 241

Query:    66 LIFNSSLAYFVKLTNFLH---TMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTL 122
             L+ +  +A+ +    FL    T  +  + S   K  +++ +SIL+F+N      + G  +
Sbjct:   242 LLLSGLIAFLLNTFTFLVIKLTSPLTYTVSGNLKVVLSISISILVFKNETNFFNVLGCAI 301

Query:   123 TIIGVILYKEAK-KQSK 138
              I+GV+ Y   K ++SK
Sbjct:   302 AIMGVVCYSNIKYEESK 318

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2204690 AT1G77610 [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 44/134 (32%), Positives = 68/134 (50%)

Query:     5 AWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFL-IPAVLIMEKDVVGITIALAKQDVE 61
             A + +T+L   LL   K +S+N + YMAP A + L IPA+L+   +  GI          
Sbjct:   166 ATSTKTILAESLLHGYKFDSINTVYYMAPFATMILGIPALLL---EGSGILSWFEAHPAP 222

Query:    62 FLWYLIFNSS--LAYFVKLTNF--LH-TMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
             +   +I  SS  LA+ +  + F  +H T  V  + +   K A+AV+VS LIFRN +    
Sbjct:   223 WSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVMVSWLIFRNPISYMN 282

Query:   117 MSGYTLTIIGVILY 130
               G  +T++G   Y
Sbjct:   283 AVGCGITLVGCTFY 296

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2093596 AT3G17430 [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 40/140 (28%), Positives = 72/140 (51%)

Query:     5 AWALRTVLQGILLSK----VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
             A ALR VL  +LL K    +N +  L Y+AP + +FL     ++EK  + ++       +
Sbjct:   171 AEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLALPWYVLEKPTMEVS------QI 224

Query:    61 EFLWYLIFNSSL-AYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
             +F +++ F+++L A  +  + FL    T  V +  +   K  I + +S +IF     ITG
Sbjct:   225 QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPEST-ITG 283

Query:   117 MS--GYTLTIIGVILYKEAK 134
             ++  GY + + GV++Y   K
Sbjct:   284 LNITGYAIALCGVVMYNYIK 303

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2007745 AT1G48230 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 40/140 (28%), Positives = 72/140 (51%)

Query:     5 AWALRTVLQGILLSK----VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
             A ALR VL  +LL K    +N +  L Y+AP + +FL     ++EK  + ++       +
Sbjct:   171 AEALRLVLTQVLLQKKGLTLNPVTSLYYIAPCSFVFLSLPWYVLEKPNIDVS------QI 224

Query:    61 EFLWYLIFNSSL-AYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
             +F +++ F+++L A  +  + FL    T  V +  +   K  I + +S +IF     ITG
Sbjct:   225 QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPEST-ITG 283

Query:   117 MS--GYTLTIIGVILYKEAK 134
             ++  GY + + GV++Y   K
Sbjct:   284 LNITGYAIALCGVVMYNYIK 303

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2201138 GONST5 "golgi nucleotide sugar transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 9.3e-06, P = 9.3e-06
 Identities = 40/133 (30%), Positives = 65/133 (48%)

Query:     5 AWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFL-IPAVLIMEKDVVGITIALAKQDVE 61
             A + +T+L   LL   K +S+N + YMAP A + L +PA L+    ++    A       
Sbjct:   172 ATSTKTILAESLLHGYKFDSINTVYYMAPFATMILGLPAFLLERNGILDWFEAHPSPWSA 231

Query:    62 FLWYLIFNSS-LAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
              +  ++FNS  LA+ +  + F     T  V  + +   K A+AV VS +IFRN +     
Sbjct:   232 LI--ILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNA 289

Query:   118 SGYTLTIIGVILY 130
              G  +T++G   Y
Sbjct:   290 VGCGITLVGCTFY 302

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0006863 "purine nucleobase transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00101881 hypothetical protein (306 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	138
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	3e-12

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)

Query: 7   ALRTVLQGILLSKV-----NSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVE 61
           ALR +L   LL K      N + LL Y++PVA I L+P +L  E   +G  I     D++
Sbjct: 13  ALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKLGKFILKFFGDLK 72

Query: 62  FLWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWK------CKGAIAVVVSILIFRNLVYIT 115
              Y++          L N      +  +S          K  + +V+S++IF + V   
Sbjct: 73  TSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVLSVIIFGDPVTFL 132

Query: 116 GMSGYTLTIIGVILY 130
            + G  + I+GV+LY
Sbjct: 133 NILGLAIAILGVVLY 147

This family includes transporters with a specificity for triose phosphate. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	138
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.93
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.92
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.83
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.8
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.77
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.64
KOG1581	327	consensus UDP-galactose transporter related protei	99.53
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.51
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.41
PLN00411	358	nodulin MtN21 family protein; Provisional	99.38
KOG1580	337	consensus UDP-galactose transporter related protei	99.35
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.33
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.3
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.29
PLN00411	358	nodulin MtN21 family protein; Provisional	99.2
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.18
PRK15430	296	putative chloramphenical resistance permease RarD;	99.15
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.13
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.12
PRK11272	292	putative DMT superfamily transporter inner membran	99.12
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.08
PRK11689	295	aromatic amino acid exporter; Provisional	99.06
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.96
PRK11689	295	aromatic amino acid exporter; Provisional	98.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.95
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.93
PRK11272	292	putative DMT superfamily transporter inner membran	98.91
PRK15430	296	putative chloramphenical resistance permease RarD;	98.87
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.83
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.79
COG2510	140	Predicted membrane protein [Function unknown]	98.79
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.75
KOG1582	367	consensus UDP-galactose transporter related protei	98.73
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.67
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.65
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.6
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.44
COG2962	293	RarD Predicted permeases [General function predict	98.3
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.25
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.9
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.9
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.87
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.86
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.78
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.78
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.72
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.72
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.7
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.64
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.56
PRK11431	105	multidrug efflux system protein; Provisional	97.5
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.42
COG2962	293	RarD Predicted permeases [General function predict	97.4
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.27
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.27
COG2076	106	EmrE Membrane transporters of cations and cationic	97.1
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.95
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.68
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.6
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.19
KOG2765	416	consensus Predicted membrane protein [Function unk	96.18
KOG2766	336	consensus Predicted membrane protein [Function unk	95.15
KOG2765	416	consensus Predicted membrane protein [Function unk	94.86
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	93.79
PRK13499	345	rhamnose-proton symporter; Provisional	92.76
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	92.72
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	92.64
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	92.4
KOG4510	346	consensus Permease of the drug/metabolite transpor	90.85
KOG3912	372	consensus Predicted integral membrane protein [Gen	89.28
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	87.27
KOG1581	327	consensus UDP-galactose transporter related protei	86.21
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	82.22
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	81.16

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.93  E-value=2.9e-25  Score=152.97  Aligned_cols=132  Identities=29%  Similarity=0.456  Sum_probs=117.7

Q ss_pred             CchHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhh-----hhhHHHHHHHH
Q 041827            1 PDIPAWALRTVLQGILLS-------KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAK-----QDVEFLWYLIF   68 (138)
Q Consensus         1 ~a~~~~a~~~v~~k~~l~-------~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~-----~~~~~~~~~~~   68 (138)
                      +|+++.|+|++++|++++       +.||+++++|+++.++++++|.++..|+++..+......     .++..+..++.
T Consensus         7 ~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (153)
T PF03151_consen    7 ASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLIL   86 (153)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHH
Confidence            378999999999999986       479999999999999999999999999876443332221     14567888999


Q ss_pred             HHHHHHHHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhh
Q 041827           69 NSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKE  132 (138)
Q Consensus        69 ~~~~~~~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~  132 (138)
                      +|++++.+|.+.|.   ++||+|++|.+++|++++++.|+++|||++|+.|+.|+++++.|+++|++
T Consensus        87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            99999999999999   99999999999999999999999999999999999999999999999985

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.92  E-value=1.8e-25  Score=169.90  Aligned_cols=136  Identities=40%  Similarity=0.560  Sum_probs=115.1

Q ss_pred             CchHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHHH-HHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 041827            1 PDIPAWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLI-PAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF   75 (138)
Q Consensus         1 ~a~~~~a~~~v~~k~~l~----~~~~~~l~~~~~~~~~~~l~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (138)
                      ++++.+++|++++|++++    ++|++++++|++|++.+.++ |+....|++.. ..+.....+...+..+ ++++++|+
T Consensus       170 ~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~sv~~f~  247 (316)
T KOG1441|consen  170 ISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILL-LNSVLAFL  247 (316)
T ss_pred             HHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHH-HHHHHHHH
Confidence            367899999999999995    69999999999999999999 88777777654 2111111222234444 44499999


Q ss_pred             HHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhhcC
Q 041827           76 VKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK  138 (138)
Q Consensus        76 ~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~~k  138 (138)
                      +|++.|.   +|||+|++|.|++|+++++++|+++|+||+|+.|.+|++++++|+++|++.|.|+|
T Consensus       248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~  313 (316)
T KOG1441|consen  248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK  313 (316)
T ss_pred             HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence            9999999   99999999999999999999999999999999999999999999999999999865

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.83  E-value=2.5e-19  Score=138.93  Aligned_cols=133  Identities=20%  Similarity=0.309  Sum_probs=112.2

Q ss_pred             chHHHHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHh----hh--hhhHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSK-------VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIAL----AK--QDVEFLWYLIF   68 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~-------~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~----~~--~~~~~~~~~~~   68 (138)
                      |++++++|+++.|+.+++       +++.++..+..+++.++++|+....|+......+..    ..  .+...++.++.
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  281 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF  281 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            678999999999999973       678889999999999999999877886443332211    11  12334566777


Q ss_pred             HHHHHHHHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           69 NSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        69 ~~~~~~~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      +++.++++|.+.|+   ++||+|+++.+++||+++++.|++++||++|+.|++|.++++.|+++|++.|
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            88888889999999   9999999999999999999999999999999999999999999999999875

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.80  E-value=1.4e-18  Score=131.96  Aligned_cols=137  Identities=20%  Similarity=0.238  Sum_probs=108.9

Q ss_pred             chHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHH-HHHhh--hhh-hHHHHHHHHHHHHH-H
Q 041827            2 DIPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGI-TIALA--KQD-VEFLWYLIFNSSLA-Y   74 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~-~~~~~--~~~-~~~~~~~~~~~~~~-~   74 (138)
                      |+++++++++++|+.++  ++||.++..|+.+.+.+.++|.....|+.+... .+...  ... ...+...+..+..+ +
T Consensus       153 a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (302)
T TIGR00817       153 SNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFH  232 (302)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Confidence            67899999999999998  899999999999999999999987777543221 11110  011 11233344444433 4


Q ss_pred             HHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhhcC
Q 041827           75 FVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK  138 (138)
Q Consensus        75 ~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~~k  138 (138)
                      .+|...|.   ++||.++++.+.+||++++++|++++||++|+.|++|.++++.|+++|++.|+|+|
T Consensus       233 ~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       233 FYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             HHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            47866666   99999999999999999999999999999999999999999999999999988764

specificities overlap.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.77  E-value=2.1e-17  Score=125.81  Aligned_cols=137  Identities=18%  Similarity=0.247  Sum_probs=118.4

Q ss_pred             chHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLT   79 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~   79 (138)
                      +.+++|+.++++|++++  +.++.++++|.+.++.+..++.....+..+..+..+....++..+..+++.++.++..+..
T Consensus       162 sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~  241 (303)
T PF08449_consen  162 SLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFF  241 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            56899999999999998  7899999999999999998888766332233344444445666788888899999887766


Q ss_pred             HHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhhcC
Q 041827           80 NFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK  138 (138)
Q Consensus        80 ~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~~k  138 (138)
                      .+.   ++||++.+++.++|+.+++++|+++||+++++.|+.|+++++.|..+|++.|+|+|
T Consensus       242 i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  242 IFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            666   99999999999999999999999999999999999999999999999999999987

; GO: 0055085 transmembrane transport

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.64  E-value=2.1e-15  Score=113.01  Aligned_cols=132  Identities=20%  Similarity=0.336  Sum_probs=113.6

Q ss_pred             CchHHHHHHHHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhh-hhh----hHHHHHHHHHH
Q 041827            1 PDIPAWALRTVLQGILLS-----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALA-KQD----VEFLWYLIFNS   70 (138)
Q Consensus         1 ~a~~~~a~~~v~~k~~l~-----~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~-~~~----~~~~~~~~~~~   70 (138)
                      +|+++.++||.++|.+++     +-+|...+++.+|...+.++|..+..||+......... ..+    ......+.+.|
T Consensus       171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g  250 (349)
T KOG1443|consen  171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGG  250 (349)
T ss_pred             HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHH
Confidence            478999999999999998     46799999999999999999999999997543222211 111    23455678899


Q ss_pred             HHHHHHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhh
Q 041827           71 SLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKE  132 (138)
Q Consensus        71 ~~~~~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~  132 (138)
                      .++|+.-.++|.   +||.+|.+|+|..|++++++++..+.+|+++..|+.|..++..|+..|.+
T Consensus       251 ~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  251 LLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            999999999999   99999999999999999999999999999999999999999999999944

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.53  E-value=1e-13  Score=103.86  Aligned_cols=131  Identities=14%  Similarity=0.166  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            4 PAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         4 ~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      ++|++.+..|+++.+  ++++++++++++.++++.....  +.+..++.+..+..+.||..++.+++-+.+|-..+.+.|
T Consensus       182 ~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~--li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~  259 (327)
T KOG1581|consen  182 LFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY--LILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIF  259 (327)
T ss_pred             HHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh--hhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheeh
Confidence            579999999999998  8999999999999999887776  445455666677778889999999999999999888888


Q ss_pred             H---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhh
Q 041827           82 L---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQ  136 (138)
Q Consensus        82 ~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~  136 (138)
                      +   +-+|++...+...|+.+.+++|.+.||+|+++.|+.|..+++.|..+-.+.|.|
T Consensus       260 ~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  260 YTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            8   899999999999999999999999999999999999999999999987766654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.51  E-value=9.9e-14  Score=104.66  Aligned_cols=133  Identities=16%  Similarity=0.134  Sum_probs=108.9

Q ss_pred             hHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhh--hhhhHHHHHHHHHHHHHHHHHH
Q 041827            3 IPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALA--KQDVEFLWYLIFNSSLAYFVKL   78 (138)
Q Consensus         3 ~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~n~   78 (138)
                      ++..+...+..|+-.+  +.+.+++++|++..+.+.+.....++|+-+  +.....  ..+..++..+.++|++||..|+
T Consensus       166 ~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~--~l~~~~~~~~~~~~~~~~~lScv~gf~isy  243 (314)
T KOG1444|consen  166 CLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD--ALSLNFDNWSDSSVLVVMLLSCVMGFGISY  243 (314)
T ss_pred             HHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH--HHHhhcccccchhHHHHHHHHHHHHHHHHH
Confidence            5566777788888877  789999999999999988888877665422  111111  1234567889999999999999


Q ss_pred             HHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCc-cccchhhhhHHHHHHHHHHHhhhhhhcC
Q 041827           79 TNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRN-LVYITGMSGYTLTIIGVILYKEAKKQSK  138 (138)
Q Consensus        79 ~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~-~~t~~~~~G~~l~~~Gv~~Y~~~k~~~k  138 (138)
                      +.++   .+||+|.+++| .|+.+.+.++.++++| |.++.+++|+.+.+.|-.+|++.|.|+|
T Consensus       244 ~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k  306 (314)
T KOG1444|consen  244 TSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKK  306 (314)
T ss_pred             HHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhc
Confidence            9999   89999999999 8888888888887766 7999999999999999999999998765

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.41  E-value=1.5e-13  Score=101.98  Aligned_cols=134  Identities=13%  Similarity=0.177  Sum_probs=111.7

Q ss_pred             chHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKV--NSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAK-QDVEFLWYLIFNSSLAYFVKL   78 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~--~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~n~   78 (138)
                      |+++-|+..+.+|+.+...  .-+.+.+|++..+.++.+|...+. ++ +.+.+.... ....+|..+.++|++||..|+
T Consensus       193 aSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~ln-ge-~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgy  270 (347)
T KOG1442|consen  193 ASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILN-GE-FQAVVGFPHLPAIKFWILMTLSGLFGFAMGY  270 (347)
T ss_pred             HHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHc-ch-HHHHcCcccchHHHHHHHHHHHHHHHHHhhh
Confidence            5788899999999888632  358899999999999999976443 22 222222111 234578899999999999999


Q ss_pred             HHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhhc
Q 041827           79 TNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQS  137 (138)
Q Consensus        79 ~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~~  137 (138)
                      ..++   .|||+|++|.++.|.+...++++.+++|.-+..-|.|-.+.+.|...|++.|.+|
T Consensus       271 vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e  332 (347)
T KOG1442|consen  271 VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE  332 (347)
T ss_pred             eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence            9998   8999999999999999999999999999999999999999999999999998653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.38  E-value=1.2e-11  Score=96.42  Aligned_cols=133  Identities=17%  Similarity=0.148  Sum_probs=92.9

Q ss_pred             chHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhh-hHHHHHHHHHHHHHHH-HHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSM-NLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQD-VEFLWYLIFNSSLAYF-VKL   78 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~-~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~n~   78 (138)
                      |+++||++++.+|+..++.+|. ....+......+.+.+..+..|+.+...+......+ ....+..+.. .++|. +|.
T Consensus       197 aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t-~lay~lw~~  275 (358)
T PLN00411        197 QGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT-SVYYVIHSW  275 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH-HHHHHHHHH
Confidence            5789999999999998877554 555666666666666666666543221111000101 1112222222 23433 444


Q ss_pred             HHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhh
Q 041827           79 TNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQ  136 (138)
Q Consensus        79 ~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~  136 (138)
                      ..- +.+|...++...+.|++.+++|++++||++++.+++|.++.+.|+++-+..|.+
T Consensus       276 ~v~-~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~  332 (358)
T PLN00411        276 TVR-HKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKAN  332 (358)
T ss_pred             HHh-ccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhh
Confidence            444 999999999999999999999999999999999999999999999998876654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.35  E-value=6.3e-12  Score=91.87  Aligned_cols=125  Identities=12%  Similarity=0.120  Sum_probs=103.5

Q ss_pred             HHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041827            5 AWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL   82 (138)
Q Consensus         5 ~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~   82 (138)
                      .+++....|++.-.  +-+.-++|+|++.++.+.+-...++. ++ .+++.....++|..++-+.+-++.+.+.+.+.|.
T Consensus       183 mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfT-GE-lweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~  260 (337)
T KOG1580|consen  183 MDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFT-GE-LWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFK  260 (337)
T ss_pred             hcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheeh-hh-HHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHH
Confidence            46677777887765  56788999999999998887765443 33 3344445567788888888888888888888888


Q ss_pred             ---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           83 ---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        83 ---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                         ..+|++.||+.+.++.++++.|+++|++|++++||+|..+++.|...-.
T Consensus       261 tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  261 TVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence               8999999999999999999999999999999999999999999987644

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.33  E-value=1.6e-11  Score=80.78  Aligned_cols=121  Identities=21%  Similarity=0.291  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHH-HHHHHHHHH
Q 041827            4 PAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLA-YFVKLTNFL   82 (138)
Q Consensus         4 ~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~~~f~   82 (138)
                      ++||...+..|+..++.||.+...++...+.+ +++.....+..+    ...  .+...+......|.++ ...+...+.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKP----FKN--LSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccC--CChhhhhhhhHhhccceehHHHHHHH
Confidence            46889999999999999999999999999998 777666655433    110  1111123333334443 222332333


Q ss_pred             ---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           83 ---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        83 ---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                         ++++...+....+.|+++.+.+++++||++++.+++|+.+.+.|+.+.+
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence               8999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.30  E-value=9.1e-11  Score=89.00  Aligned_cols=128  Identities=10%  Similarity=0.039  Sum_probs=95.8

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTN   80 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~   80 (138)
                      |.+++|++.+..|+..++.+|.... +...++.+.+.|.....+....   ++ ...+...++..++++..++. +|...
T Consensus       156 aa~~~a~~~v~~r~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~---~~-~~~~~~~l~lgv~~t~~~~~l~~~~~  230 (293)
T PRK10532        156 AGACWAIYILSGQRAGAEHGPATVA-IGSLIAALIFVPIGALQAGEAL---WH-WSILPLGLAVAILSTALPYSLEMIAL  230 (293)
T ss_pred             HHHHHHHHHHHHHHHhccCCchHHH-HHHHHHHHHHHHHHHHccCccc---CC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999998778887764 5556677777777654332110   10 01111224555666666665 56555


Q ss_pred             HHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhh
Q 041827           81 FLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKK  135 (138)
Q Consensus        81 f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~  135 (138)
                      . +.+|...++...+.|++.++.|++++||++++.+++|.++.+.|++.++....
T Consensus       231 ~-~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~  284 (293)
T PRK10532        231 T-RLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR  284 (293)
T ss_pred             H-hcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence            5 99999999999999999999999999999999999999999999999875543

>TIGR00688 rarD rarD protein

Probab=99.29  E-value=2.6e-10  Score=84.71  Aligned_cols=127  Identities=9%  Similarity=0.073  Sum_probs=93.6

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhch-hhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEK-DVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTN   80 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~   80 (138)
                      ++++|+...+..|. ..++||.++.++|..++.+.+++......+ ....+..+..+ ....+..+...|++....+.+.
T Consensus        10 a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~   87 (256)
T TIGR00688        10 ASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQ-KRPLILSLLLCGLLIGFNWWLF   87 (256)
T ss_pred             HHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcc-cchHHHHHHHHHHHHHHHHHHH
Confidence            57899999999998 457999999999999999888776543322 11111111110 1111234555666544455555


Q ss_pred             HH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           81 FL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        81 f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      +.   ++++.+.++....-|+++.+++.+++|||++.++++|..+++.|+.+-
T Consensus        88 ~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        88 IWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            54   788899999999999999999999999999999999999999998864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.20  E-value=6.4e-10  Score=86.76  Aligned_cols=123  Identities=16%  Similarity=0.215  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041827            4 PAWALRTVLQGILLS-KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL   82 (138)
Q Consensus         4 ~~~a~~~v~~k~~l~-~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~   82 (138)
                      ++.+-..++.|..++ .+||..+..||..++.++++|+....|++...+     +.+...+..+.+.|++++.++...|.
T Consensus        23 ~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~-----~~~~~~~~~l~l~g~~g~~~~~~~~~   97 (358)
T PLN00411         23 TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP-----PLSVSILSKIGLLGFLGSMYVITGYI   97 (358)
T ss_pred             HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC-----cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345566788888888 799999999999999999999876554321101     01111245666677777556665555


Q ss_pred             ---hhhhhHHhhhhhhhhHHHHHhHHHh------hCccccchhhhhHHHHHHHHHHHh
Q 041827           83 ---HTMCVWLSSSWKCKGAIAVVVSILI------FRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        83 ---~tsalt~sv~~~~k~v~~i~~s~~~------f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                         +|+|.+.++..+..|+++.++++++      ++|+++..+++|+++++.|+.+-.
T Consensus        98 gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         98 GIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence               8999999999999999999999999      699999999999999999988744

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.18  E-value=1.7e-10  Score=85.84  Aligned_cols=130  Identities=19%  Similarity=0.241  Sum_probs=104.9

Q ss_pred             chHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhh-h-----------hhhHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALA-K-----------QDVEFLWYLI   67 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~-~-----------~~~~~~~~~~   67 (138)
                      |.+.+|.-+++||...+  .-++-+.++|.-..+    +|..++..+ +..+++... +           .-|..|..++
T Consensus       172 al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~Ls----LP~Flf~~~-div~~~~~~~~se~~~~p~~g~~vP~~~~yLl  246 (330)
T KOG1583|consen  172 ALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLS----LPLFLFMGD-DIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL  246 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhc----cchHHHhcc-hHHHHHHHHhcCcceeccccCccccHHHHHHH
Confidence            35678888899998887  578999999998877    455444332 233333211 0           1256788999


Q ss_pred             HHHHHHHHHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhh
Q 041827           68 FNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQ  136 (138)
Q Consensus        68 ~~~~~~~~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~  136 (138)
                      .+++..+.+--..|.   +++++|.+++-++|+-+..++|++.|++|+|+.+|+|..+++.|.++|+....+
T Consensus       247 ~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~  318 (330)
T KOG1583|consen  247 FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNH  318 (330)
T ss_pred             HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            999999998888888   999999999999999999999999999999999999999999999999876544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.15  E-value=3.6e-09  Score=80.38  Aligned_cols=126  Identities=12%  Similarity=0.101  Sum_probs=91.4

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      +++.|+...+..|.. .++||.++..+|..++.+.+++..... ++ ..+.....+ ++..+......++.....+.+.|
T Consensus        16 a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   91 (296)
T PRK15430         16 AYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSIC-RQ-WSYLKTLIQ-TPQKIFMLAVSAVLIGGNWLLFI   91 (296)
T ss_pred             HHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHH-cc-HHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence            567899999999875 579999999999999998888765332 21 111111111 11112222233333333455555


Q ss_pred             H---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           82 L---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        82 ~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      +   ++++.+.++.....|+++.+++.+++||+++.+++.|+++++.|+.+-.
T Consensus        92 ~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         92 WAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            5   8999999999999999999999999999999999999999999998753

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.13  E-value=7.5e-10  Score=80.49  Aligned_cols=131  Identities=11%  Similarity=0.066  Sum_probs=105.1

Q ss_pred             HHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            4 PAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         4 ~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      +..+..-...|+-.+  +....+.++|.+.++..+++.+.++.|+..-.+..+..+.|  .+..++++|++++...++.-
T Consensus       165 lssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d--~l~am~ISgl~svgiSy~sa  242 (309)
T COG5070         165 LSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVD--SLMAMFISGLCSVGISYCSA  242 (309)
T ss_pred             HhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChH--HHHHHHHHHHHHhhhhhccc
Confidence            444555555555554  67789999999999999999999988864322222222222  36678899999998887777


Q ss_pred             H---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhh
Q 041827           82 L---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQ  136 (138)
Q Consensus        82 ~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~  136 (138)
                      +   .||..|++..|++++....+.|.++|++|.+...+..+.+-++.-..|.++|.+
T Consensus       243 WcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         243 WCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             eeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            7   899999999999999999999999999999999999999999999999888654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.12  E-value=1.9e-09  Score=79.77  Aligned_cols=121  Identities=21%  Similarity=0.217  Sum_probs=85.7

Q ss_pred             chHHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHH
Q 041827            2 DIPAWALRTVLQGILLSKVNS--MNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKL   78 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~--~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~   78 (138)
                      |+++++.+++..|+..++.|+  .....++...+.+.+.|.....|++.. .   ..+++........+....++. ++.
T Consensus       136 a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~  211 (260)
T TIGR00950       136 SGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ-A---LSLQWGALLYLGLIGTALAYFLWNK  211 (260)
T ss_pred             HHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-c---chHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999876664  455556778888888888765443221 1   111111112222222333333 333


Q ss_pred             HHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHH
Q 041827           79 TNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGV  127 (138)
Q Consensus        79 ~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv  127 (138)
                      ..- +.++.+.++...+.|++.++++++++||++++.++.|..+.+.|+
T Consensus       212 a~~-~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       212 GLT-LVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHh-cCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            322 899999999999999999999999999999999999999999986

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.12  E-value=2.4e-09  Score=81.14  Aligned_cols=131  Identities=14%  Similarity=0.056  Sum_probs=93.2

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTN   80 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~   80 (138)
                      |++++|.+++.+|+..+ .++.....+....+...+.|.....|.+.. . ....+.+....+..+..+..++. ++...
T Consensus       158 a~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~l~i~~s~~~~~l~~~~~  234 (292)
T PRK11272        158 ASASWAFGSVWSSRLPL-PVGMMAGAAEMLAAGVVLLIASLLSGERLT-A-LPTLSGFLALGYLAVFGSIIAISAYMYLL  234 (292)
T ss_pred             HHHHHHHHHHHHHhcCC-CcchHHHHHHHHHHHHHHHHHHHHcCCccc-c-cCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999753 345566677777777777777654432210 0 00111222223333444444543 44444


Q ss_pred             HHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhh
Q 041827           81 FLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQ  136 (138)
Q Consensus        81 f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~  136 (138)
                      . +.++.+.++...+.|+...+.+++++||++|+.+++|.++.+.|+++.+..+.|
T Consensus       235 ~-~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        235 R-NVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             h-hcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4 899999999999999999999999999999999999999999999998776554

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.08  E-value=9.9e-09  Score=78.02  Aligned_cols=131  Identities=11%  Similarity=0.128  Sum_probs=85.2

Q ss_pred             chHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHhchhhHH-HHHHhh--hhhhHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNS---MNLLMYMAPVAAIFLIPAVLIMEKDVVG-ITIALA--KQDVEFLWYLIFNSSLAYF   75 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~---~~l~~~~~~~~~~~l~~~~~~~e~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~   75 (138)
                      |+++++.+++++|+..++.++   .....+....+.+.+.+.....|++... +.+...  ..+....+..++++..++.
T Consensus       151 aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~  230 (299)
T PRK11453        151 AAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYG  230 (299)
T ss_pred             HHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999998754333   3334444444444444444444543211 111111  1222223333444455544


Q ss_pred             -HHHHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           76 -VKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        76 -~n~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                       ++.... +.+|.+.++...+.|++.++.|++++||++++.+++|.++.+.|+++-.+.
T Consensus       231 l~~~~l~-~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        231 IWGTLLG-RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence             333333 788889999999999999999999999999999999999999999885433

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.06  E-value=3.5e-09  Score=80.40  Aligned_cols=122  Identities=11%  Similarity=0.153  Sum_probs=81.6

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTN   80 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~   80 (138)
                      |++++|.++++.|+..++.|+......   .+...+.+.....|.+.  ...+ ...+....+.. +.+.+++. +|...
T Consensus       164 aa~~~A~~~v~~k~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~--~~~~-~~~~~~l~~~~-~~t~~~~~l~~~al  236 (295)
T PRK11689        164 GAFIWAAYCNVTRKYARGKNGITLFFI---LTALALWIKYFLSPQPA--MVFS-LPAIIKLLLAA-AAMGFGYAAWNVGI  236 (295)
T ss_pred             HHHHHHHHHHHHhhccCCCCchhHHHH---HHHHHHHHHHHHhcCcc--ccCC-HHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            678999999999999877888765432   22333333332322111  0010 01111112211 23344443 44444


Q ss_pred             HHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           81 FLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        81 f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      . +.+|...++...+.|++.++.+++++||++++.+++|.++.+.|++.-.
T Consensus       237 ~-~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        237 L-HGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             H-ccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            4 8999999999999999999999999999999999999999999986653

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.96  E-value=1.2e-08  Score=78.80  Aligned_cols=129  Identities=16%  Similarity=0.224  Sum_probs=101.3

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTN   80 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~   80 (138)
                      |+.+.|++++++|+..++.|+.+.+.....++.++..|.....|+.++.+. ++   +......++.-++.-|. +....
T Consensus       176 ~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~-~w---~~~~~~~~v~~~~~lf~~y~l~p  251 (334)
T PF06027_consen  176 GAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESI-HW---TSQVIGLLVGYALCLFLFYSLVP  251 (334)
T ss_pred             HHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc-CC---ChhhHHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999999998888887765332 11   12222333333333333 43433


Q ss_pred             HH--hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           81 FL--HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        81 f~--~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      +.  .+||+..++..-.-+...++.++++||+++++..++|.++.++|...|+...
T Consensus       252 ~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  252 IVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            33  8999999998888899999999999999999999999999999999998653

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.95  E-value=1.8e-08  Score=76.51  Aligned_cols=117  Identities=13%  Similarity=0.099  Sum_probs=87.2

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      ++++|+...+..|..+++++|+.+..+|...+.++++|+.   ..+..+      +.+   +..++..++....++...|
T Consensus        12 a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~------~~~---~~~~~~~~l~~~~~~~~~~   79 (295)
T PRK11689         12 AILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV---GFPRLR------QFP---KRYLLAGGLLFVSYEICLA   79 (295)
T ss_pred             HHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc---cccccc------ccc---HHHHHHHhHHHHHHHHHHH
Confidence            5788999999999999899999999999999988888752   112111      111   1222233332222444333


Q ss_pred             H-------hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           82 L-------HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        82 ~-------~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      .       .+++.+.++.....|+++.+++++++||++++++++|..+++.|+.+-
T Consensus        80 ~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li  135 (295)
T PRK11689         80 LSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWV  135 (295)
T ss_pred             HHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhe
Confidence            2       356777889999999999999999999999999999999999998764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.95  E-value=2.3e-08  Score=73.97  Aligned_cols=113  Identities=15%  Similarity=0.093  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHHHH-
Q 041827            6 WALRTVLQGILLS-KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTNFL-   82 (138)
Q Consensus         6 ~a~~~v~~k~~l~-~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~f~-   82 (138)
                      |+...+..|..++ ..|+.++.+++...+.+.+.|.....  +        .+.+   +......|.+++. .+.+.|. 
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~--~--------~~~~---~~~~~~~~~~~~~l~~~~~~~a   67 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR--P--------PLKR---LLRLLLLGALQIGVFYVLYFVA   67 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc--c--------CHhH---HHHHHHHHHHHHHHHHHHHHHH
Confidence            5667888999887 68999999999999988888864321  1        0111   2233445555544 5555555 


Q ss_pred             --hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           83 --HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        83 --~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                        ++++-+.+++..+.|+++.+++.+++||+++++++.|+.++++|+.+..
T Consensus        68 ~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~  118 (260)
T TIGR00950        68 VKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLL  118 (260)
T ss_pred             HHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhc
Confidence              8888889999999999999999999999999999999999999998864

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.93  E-value=2.3e-08  Score=75.38  Aligned_cols=123  Identities=11%  Similarity=0.063  Sum_probs=88.4

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      |++++|.+.+.+|+..++-++.  ..++...+.+.++|.......+   ..+...  +...+...+..++....++...+
T Consensus         9 aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   81 (281)
T TIGR03340         9 SALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQ---VGWSRL--PATFWLLLAISAVANMVYFLGLA   81 (281)
T ss_pred             HHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhccc---CCCCCc--chhhHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999888754443  4667777777888876432111   111111  11123445556655555666656


Q ss_pred             H---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           82 L---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        82 ~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      .   ++++-..++.....|+++.+++++++||+++.++++|+.+++.|+.+-.
T Consensus        82 ~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~  134 (281)
T TIGR03340        82 QAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG  134 (281)
T ss_pred             HHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence            5   6778888888888999999999999999999999999999999998754

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.91  E-value=7.5e-08  Score=72.96  Aligned_cols=119  Identities=11%  Similarity=0.040  Sum_probs=87.9

Q ss_pred             hHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHHH
Q 041827            3 IPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTNF   81 (138)
Q Consensus         3 ~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~f   81 (138)
                      .+.|+...+..|..++++||.+...+|...+.+.++|.... ++....    . +.+   +......|.+.+. ++...+
T Consensus        17 ~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~-~~~~~~----~-~~~---~~~~~~~g~~~~~~~~~~~~   87 (292)
T PRK11272         17 YIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLL-RGHPLP----T-LRQ---WLNAALIGLLLLAVGNGMVT   87 (292)
T ss_pred             HHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH-hCCCCC----c-HHH---HHHHHHHHHHHHHHHHHHHH
Confidence            57899999999998889999999999999999998887543 321110    0 111   2333445544432 222222


Q ss_pred             H----hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           82 L----HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        82 ~----~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      .    ++++-..++.....|+++.+++.+ +||+++.++++|..+++.|+.+-.
T Consensus        88 ~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~  140 (292)
T PRK11272         88 VAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLN  140 (292)
T ss_pred             HHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHh
Confidence            2    666777888999999999999985 799999999999999999998754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.87  E-value=5.6e-08  Score=73.83  Aligned_cols=122  Identities=10%  Similarity=0.132  Sum_probs=77.9

Q ss_pred             chHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHH---HHHHHHH-
Q 041827            2 DIPAWALRTVLQGILLSK--VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIF---NSSLAYF-   75 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~--~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-   75 (138)
                      |++++|++.+..|+..++  .++.....+..+.+.+...+..   +.+.  ..+.. ..+ ..+..+..   .+..++. 
T Consensus       157 aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~-~~~-~~~~~~~~~g~~t~i~~~~  229 (296)
T PRK15430        157 LAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSST--SHMGQ-NPM-SLNLLLIAAGIVTTVPLLC  229 (296)
T ss_pred             HHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCc--ccccC-CcH-HHHHHHHHHHHHHHHHHHH
Confidence            578999999999997532  2334444455555544433321   1111  00000 000 11122222   3334443 


Q ss_pred             HHHHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           76 VKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        76 ~n~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      ++.... +.+|...++...+.|++.++.+++++||++++.++.|.++.+.|+.+..
T Consensus       230 ~~~a~~-~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        230 FTAAAT-RLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHh-cCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            444444 8999999999999999999999999999999999999999988877654

>TIGR00803 nst UDP-galactose transporter

Probab=98.83  E-value=1.2e-08  Score=74.33  Aligned_cols=125  Identities=9%  Similarity=-0.025  Sum_probs=79.5

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHhc---hhhHHHHHHhhhhhhH-HHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAV-LIME---KDVVGITIALAKQDVE-FLWYLIFNSSLAYFV   76 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~-~~~e---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~   76 (138)
                      +..++++.++++++..++.+.   ++|...++..+..+.. ...|   ............+++. .+..++.++..+.+.
T Consensus        93 a~~~~~~~~~y~e~~~k~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v  169 (222)
T TIGR00803        93 ALLSSGFAGVYFEKILKDGDT---MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLNVGGGLCI  169 (222)
T ss_pred             HHHHHhhhHHHHHHcccCCCC---chHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHHHhcCcee
Confidence            456788999999998873322   2454444444333332 1111   1111011111122222 333444444433443


Q ss_pred             HHHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           77 KLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        77 n~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      +.... +.++++.+++..++++++.++|+++|||+++..++.|..+++.|++.|
T Consensus       170 ~~vlk-~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       170 GGVVR-YADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             eehhH-HhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            33333 899999999999999999999999999999999999999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.79  E-value=1.8e-07  Score=71.14  Aligned_cols=115  Identities=18%  Similarity=0.131  Sum_probs=83.6

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTN   80 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~   80 (138)
                      ++++|+...+..|..++++||.++..+|..++.+.+++... .++.           +   +......|++... .....
T Consensus        12 ~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~-~~~~-----------~---~~~~~~~g~~~~~~~~~~~   76 (299)
T PRK11453         12 VVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVA-RPKV-----------P---LNLLLGYGLTISFGQFAFL   76 (299)
T ss_pred             HHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc-CCCC-----------c---hHHHHHHHHHHHHHHHHHH
Confidence            56899999999999998999999999999988776666431 1110           0   1112222333222 22222


Q ss_pred             HH---h-hhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           81 FL---H-TMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        81 f~---~-tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      |.   + .++-..++.....|+++.+++++++||+++.++++|.+++++|+.+-.
T Consensus        77 ~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~  131 (299)
T PRK11453         77 FCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI  131 (299)
T ss_pred             HHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence            22   3 456677888889999999999999999999999999999999988654

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.79  E-value=2.8e-08  Score=66.33  Aligned_cols=124  Identities=20%  Similarity=0.160  Sum_probs=88.0

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      ++++.++..++.|.-++++||..-..-++.+..+++....+...+.+.     ...-++..|..++++|+.+-.-.++-|
T Consensus        11 sA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~-----~~~~~~k~~lflilSGla~glswl~Yf   85 (140)
T COG2510          11 SALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA-----GGEIGPKSWLFLILSGLAGGLSWLLYF   85 (140)
T ss_pred             HHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec-----ccccCcceehhhhHHHHHHHHHHHHHH
Confidence            578899999999999999999999999999988887776543322111     111233346677788866655444444


Q ss_pred             H--h-hhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           82 L--H-TMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        82 ~--~-tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      +  + -.+--..=....-+++++++|++++||++|..+++|..+..+|..+-
T Consensus        86 ~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510          86 RALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            4  1 11111122334558899999999999999999999999999998754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.75  E-value=5e-08  Score=73.49  Aligned_cols=126  Identities=16%  Similarity=0.113  Sum_probs=72.8

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHH-HHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMN-LLMYMAPVAAIFL-IPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKL   78 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~-l~~~~~~~~~~~l-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~   78 (138)
                      ++++++++++..|+..++.+|.. ...+.. ...+.. .|...................+........+.+.+++. ++.
T Consensus       152 aal~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~l~~~l~~~  230 (281)
T TIGR03340       152 AALGTAIYSLSDKAAALGVPAFYSALGYLG-IGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMIGGAYALVLW  230 (281)
T ss_pred             HHHHHHHhhhhccccccchhcccccHHHHH-HHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56889999999888755455432 222222 222222 33332211000000000001111112222233333443 333


Q ss_pred             HHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHH
Q 041827           79 TNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVIL  129 (138)
Q Consensus        79 ~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~  129 (138)
                      ... +.++...+....+.|++.++.|++++||++++.+++|.++.+.|+..
T Consensus       231 al~-~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       231 AMT-RLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHh-hCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            333 77777888888888999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.73  E-value=6.9e-08  Score=72.19  Aligned_cols=132  Identities=14%  Similarity=0.185  Sum_probs=99.6

Q ss_pred             CchHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhh-HHHHHHHHHHHHHHH-H
Q 041827            1 PDIPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV-EFLWYLIFNSSLAYF-V   76 (138)
Q Consensus         1 ~a~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~   76 (138)
                      +|-++||.-..+|++.++  +-++.++.+|.-.+++..++....+. ++ +.+.|.....|+ ......++-++.+|. .
T Consensus       197 gALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT-ge-~f~a~~fcaehp~~tyGy~~~~s~~gylG~  274 (367)
T KOG1582|consen  197 GALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT-GE-LFSAWTFCAEHPVRTYGYAFLFSLAGYLGI  274 (367)
T ss_pred             HHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc-cc-chhhhHHHHhCcHhHHHHHHHHHHHhHhhH
Confidence            356899999999999998  56779999999999999877766443 22 223343332232 234455556666776 3


Q ss_pred             HH-HHHH-hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           77 KL-TNFL-HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        77 n~-~~f~-~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      +. .... ..+|.+.+.+.+.|+.+++++|.++|..|+|.+..-|..+.+.|+++--+.|
T Consensus       275 ~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  275 VFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            32 2222 8899999999999999999999999999999999999999999999855554

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.67  E-value=8.6e-07  Score=69.03  Aligned_cols=122  Identities=14%  Similarity=0.085  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH-
Q 041827            5 AWALRTVLQGILLSKVN-SMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL-   82 (138)
Q Consensus         5 ~~a~~~v~~k~~l~~~~-~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~-   82 (138)
                      ++...++..|.++++.+ |+.+..++..++.+...+.... .....++ .   +.+...+..++..|++++..+...+. 
T Consensus        60 ~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~-~---~~~~~~~~~llp~gl~~~~~~~~~~~s  134 (350)
T PTZ00343         60 LNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPR-I---KSLKLFLKNFLPQGLCHLFVHFGAVIS  134 (350)
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCC-C---CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34566788999998899 9999999999998766554322 1111000 0   00111345566667766654443334 


Q ss_pred             --hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           83 --HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        83 --~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                        .+++..++++-...|+++.+++.+++||+.+.+++.|.++++.|+.+-.
T Consensus       135 l~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        135 MGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence              7999999999999999999999999999999999999999999998754

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.65  E-value=8.5e-07  Score=67.39  Aligned_cols=118  Identities=11%  Similarity=0.012  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH--
Q 041827            6 WALRTVLQGILLSK-VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL--   82 (138)
Q Consensus         6 ~a~~~v~~k~~l~~-~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~--   82 (138)
                      +...+++.|.++++ ..|+.+...+...+.+.+.+.......+.    .+..++   .+..++..|++....+...+.  
T Consensus        14 ~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~g~~~~~~~~~~~~~l   86 (302)
T TIGR00817        14 NVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKR----LKISSA---LLKLLLPVAIVHTIGHVTSNVSL   86 (302)
T ss_pred             HHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCC----CCCCHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456778999886 66899999888887766555421111110    000111   234555566665444444444  


Q ss_pred             -hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           83 -HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        83 -~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                       ++|+-+.++..+..|+++.+++.+++||+++.+++.|..+++.|+.+-
T Consensus        87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~  135 (302)
T TIGR00817        87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA  135 (302)
T ss_pred             HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence             899999999999999999999999999999999999999999999764

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.60  E-value=2.7e-06  Score=55.86  Aligned_cols=103  Identities=17%  Similarity=0.221  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHHHH---hhhhhHHhhhhhhhhHHHHHh
Q 041827           28 YMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTNFL---HTMCVWLSSSWKCKGAIAVVV  103 (138)
Q Consensus        28 ~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~f~---~tsalt~sv~~~~k~v~~i~~  103 (138)
                      ++...+.+.+++.... ++ +..+.....++++  +......|.++.. .+...++   +.++ ..+....+.|+++.++
T Consensus         3 ~r~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll   77 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLI-RG-RLRDLFRALRRKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALL   77 (113)
T ss_pred             HHHHHHHHHHHHHHHH-Hc-cHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHH
Confidence            4455556655555433 22 2223233222222  2344455555553 2222222   4554 6668888999999999


Q ss_pred             HHHhhCccccchhhhhHHHHHHHHHHHhhhhh
Q 041827          104 SILIFRNLVYITGMSGYTLTIIGVILYKEAKK  135 (138)
Q Consensus       104 s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~  135 (138)
                      |.++|||+++..++.|..++++|+.+-.....
T Consensus        78 ~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   78 SWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999998766554

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.44  E-value=1.2e-05  Score=59.73  Aligned_cols=123  Identities=15%  Similarity=0.167  Sum_probs=79.7

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHH-HHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHH----HHH-
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMY-MAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSL----AYF-   75 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~-~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-   75 (138)
                      +.++++++++..|+.. +.++.....+ ..........+.. ..+.+     .   ......+..+...+++    ++. 
T Consensus       162 a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~---~~~~~~~~~~~~~g~~~~~i~~~~  231 (292)
T COG0697         162 AALLWALYTALVKRLS-RLGPVTLALLLQLLLALLLLLLFF-LSGFG-----A---PILSRAWLLLLYLGVFSTGLAYLL  231 (292)
T ss_pred             HHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHH-hcccc-----c---cCCHHHHHHHHHHHHHHHHHHHHH
Confidence            5788999999999988 6777777763 3321111222221 11111     0   0011112223333333    332 


Q ss_pred             HHHHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhh
Q 041827           76 VKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKK  135 (138)
Q Consensus        76 ~n~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~  135 (138)
                      +..... ..++...+......|+..+..+++++||+++..+++|.++.+.|+......++
T Consensus       232 ~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~  290 (292)
T COG0697         232 WYYALR-LLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR  290 (292)
T ss_pred             HHHHHH-hcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence            222222 78888888888899999999999999999999999999999999999887643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.30  E-value=6.2e-05  Score=56.85  Aligned_cols=125  Identities=12%  Similarity=0.109  Sum_probs=90.6

Q ss_pred             hHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041827            3 IPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL   82 (138)
Q Consensus         3 ~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~   82 (138)
                      -+.|++--.+.|.+- ++++.++..+|-..++++++......  +++++.++.. ++|..+....++++ -...|...|.
T Consensus        16 y~lwG~lp~y~kll~-~~~~~eIlahRviwS~~~~l~ll~~~--r~~~~~~~~~-~~p~~~~~~~l~a~-li~~nW~lfi   90 (293)
T COG2962          16 YLLWGLLPLYFKLLE-PLPATEILAHRVIWSFPFMLALLFLL--RQWRELKQLL-KQPKTLLMLALTAL-LIGLNWWLFI   90 (293)
T ss_pred             HHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHH-hCcHHHHHHHHHHH-HHHHHHHHhh
Confidence            345565556666554 79999999999999999888776554  3333444422 23333333333333 2346777777


Q ss_pred             ----hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhh
Q 041827           83 ----HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKE  132 (138)
Q Consensus        83 ----~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~  132 (138)
                          +-..+..|.-=-++|++.++++.+++||+++..|++-..++.+||..-..
T Consensus        91 WAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          91 WAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             eecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence                55678888888899999999999999999999999999999999987443

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.25  E-value=1.8e-05  Score=58.82  Aligned_cols=122  Identities=12%  Similarity=0.064  Sum_probs=91.8

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHH----HHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLA----YFVK   77 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~n   77 (138)
                      +..||+.|-+.+||.-+..|.-+-+.+-..+++++.+|+.....++.+        .+++.+..-+..++++    |...
T Consensus       156 AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l--------~~p~ll~laLgvavlSSalPYsLE  227 (292)
T COG5006         156 AGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPAL--------FSPSLLPLALGVAVLSSALPYSLE  227 (292)
T ss_pred             HhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhh--------cChHHHHHHHHHHHHhcccchHHH
Confidence            568999999999999876677777788888889999998864433332        1223333333334444    3333


Q ss_pred             HHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           78 LTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        78 ~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      ....-+.++=++++..++.|....+.+++++||++|+.||.|+...+.++.--+
T Consensus       228 miAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         228 MIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            333328899999999999999999999999999999999999999998887443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.95  E-value=9.6e-05  Score=54.99  Aligned_cols=120  Identities=13%  Similarity=0.023  Sum_probs=80.3

Q ss_pred             chHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLT   79 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~   79 (138)
                      +++++|+.+++.|+++|  +.|.+.--......+.++.++.....|+++..+..-....+...|..++..++.|......
T Consensus       122 ~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v  201 (244)
T PF04142_consen  122 AAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFV  201 (244)
T ss_pred             HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHHHhhHHHHHH
Confidence            57889999999999998  4454444445555566655555444444322211101112334566777777777776665


Q ss_pred             HHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHH
Q 041827           80 NFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTL  122 (138)
Q Consensus        80 ~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l  122 (138)
                      .- +.+.+.=.....+--+++.++|+++||.++|....+|..+
T Consensus       202 ~K-yadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  202 LK-YADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HH-HHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            55 6666666666677778999999999999999999998754

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.90  E-value=0.00048  Score=51.04  Aligned_cols=123  Identities=17%  Similarity=0.154  Sum_probs=80.8

Q ss_pred             hHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHH
Q 041827            3 IPAWALRTVLQGILLSK-VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTN   80 (138)
Q Consensus         3 ~~~~a~~~v~~k~~l~~-~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~   80 (138)
                      ++.|+......|...++ .++.....++.....+...+... .+..   ..... +.+   +....+.+.++.. .+...
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~-~~~---~~~~~~~~~~~~~~~~~~~   87 (292)
T COG0697          16 GLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLL-LEPR---GLRPA-LRP---WLLLLLLALLGLALPFLLL   87 (292)
T ss_pred             HHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH-hhcc---ccccc-ccc---hHHHHHHHHHHHHHHHHHH
Confidence            35666677777777654 66777777788777666333221 1110   00111 111   2333444444544 33444


Q ss_pred             HH---hhhhhHHhhhhhhhhHHHHHhHH-HhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           81 FL---HTMCVWLSSSWKCKGAIAVVVSI-LIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        81 f~---~tsalt~sv~~~~k~v~~i~~s~-~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                      +.   ++++-...+.....|+.+.+.+. ++++|++++.++.|..+.+.|+.+-...
T Consensus        88 ~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~  144 (292)
T COG0697          88 FLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLG  144 (292)
T ss_pred             HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecC
Confidence            43   78889999999999999999997 6679999999999999999999886544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.90  E-value=0.00026  Score=54.76  Aligned_cols=132  Identities=14%  Similarity=0.089  Sum_probs=89.1

Q ss_pred             chHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHH-hhhh-hhHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIA-LAKQ-DVEFLWYLIFNSSLAYFVK   77 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~n   77 (138)
                      +|+.+++-+++-++++|  +.|-+---.-...++.++.+...+..|++...  +. ...+ +...|..++.+++-|.+..
T Consensus       191 ~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~--~~gff~G~s~~vw~vVl~~a~gGLlvs  268 (345)
T KOG2234|consen  191 ACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN--EYGFFYGYSSIVWLVVLLNAVGGLLVS  268 (345)
T ss_pred             HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc--cCCccccccHHHHHHHHHHhccchhHH
Confidence            67899999999999997  44444444444445555555554455655433  22 2222 3445777888888887776


Q ss_pred             HHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhhh
Q 041827           78 LTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQ  136 (138)
Q Consensus        78 ~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~  136 (138)
                      ...-+ .+-+.-.-...+--+++.+.|+.+|+.++|..-.+|..+++..+..|+..+++
T Consensus       269 ~v~Ky-ADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  269 LVMKY-ADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHH-hHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            65554 22222222233345778889999999999999999999999999999977665

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.87  E-value=0.00012  Score=54.50  Aligned_cols=72  Identities=14%  Similarity=0.067  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           63 LWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        63 ~~~~~~~~~~~~~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      .....+.+++-...|...|.   +.+|.++.+....|-+.+.+++++++|++++.+||.++.+.+.|+...+...
T Consensus        17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            35566788887778888888   8999999999999999999999999999999999999999999999876553

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.86  E-value=0.00057  Score=52.12  Aligned_cols=120  Identities=13%  Similarity=0.041  Sum_probs=78.7

Q ss_pred             HHHHHHHHHHhc--CC--CHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041827            7 ALRTVLQGILLS--KV--NSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL   82 (138)
Q Consensus         7 a~~~v~~k~~l~--~~--~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~   82 (138)
                      ..+.+.+|++.+  ..  .|..+.+.......+.-.+.......+       ..+..  .+...+..+++-+.-+.....
T Consensus        13 ~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~   83 (303)
T PF08449_consen   13 CSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-------KSRKI--PLKKYAILSFLFFLASVLSNA   83 (303)
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-------CCCcC--hHHHHHHHHHHHHHHHHHHHH
Confidence            356788999987  23  366666666666555444433222100       00111  122222333333333333333


Q ss_pred             ---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhh
Q 041827           83 ---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKK  135 (138)
Q Consensus        83 ---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~  135 (138)
                         +.+--++.+.-..|++.+.+++.+++|++.++.++.+..+..+|+......+.
T Consensus        84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~  139 (303)
T PF08449_consen   84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDS  139 (303)
T ss_pred             HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccc
Confidence               67888899999999999999999999999999999999999999999877654

; GO: 0055085 transmembrane transport

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.78  E-value=0.00072  Score=51.41  Aligned_cols=118  Identities=15%  Similarity=0.074  Sum_probs=78.3

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHH----HHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAP----VAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVK   77 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~----~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n   77 (138)
                      |.++.+++.+..|..  +.||.+..+....    .+.+++.+.   .+.+.    +     ++......++.|++. ...
T Consensus       160 sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~----~-----~~~~~~~~~~~Gi~~-~ia  224 (290)
T TIGR00776       160 STIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH---ILAKP----L-----KKYAILLNILPGLMW-GIG  224 (290)
T ss_pred             HHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH---hcccc----h-----HHHHHHHHHHHHHHH-HHH
Confidence            456778888888876  5889887555544    333333332   11111    1     011122223355553 322


Q ss_pred             HHHH-H----hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhh----hhHHHHHHHHHHHhhhh
Q 041827           78 LTNF-L----HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM----SGYTLTIIGVILYKEAK  134 (138)
Q Consensus        78 ~~~f-~----~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~----~G~~l~~~Gv~~Y~~~k  134 (138)
                      ...| .    +.++.+.++.....|+..++.+++++||+.+++|+    +|.++.+.|+.+-...|
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~  290 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK  290 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence            2223 2    57789999999999999999999999999999999    99999999998765543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.78  E-value=0.00083  Score=50.95  Aligned_cols=113  Identities=12%  Similarity=0.018  Sum_probs=72.3

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      |.++++...+..|...++.||.++..+|..++.+++++..... +..    .  .+++   +...+..|++....+...|
T Consensus        20 a~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~-~~~----~--~~~~---~~~~~~~g~~~~~~~~~~~   89 (293)
T PRK10532         20 AMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPW-RLR----F--AKEQ---RLPLLFYGVSLGGMNYLFY   89 (293)
T ss_pred             HHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHH-hcc----C--CHHH---HHHHHHHHHHHHHHHHHHH
Confidence            5678999999999999889999999999999998888764211 100    0  0111   1222233333333444444


Q ss_pred             H---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           82 L---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        82 ~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      +   ++++-..++.....|+.+.+++.    |+.+  +..++++++.|+.+.
T Consensus        90 ~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~~~~~~i~~~Gv~li  135 (293)
T PRK10532         90 LSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--DFVWVVLAVLGLWFL  135 (293)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--HHHHHHHHHHHHhee
Confidence            4   67777777777888988887762    3322  345566667776553

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.72  E-value=0.0029  Score=41.44  Aligned_cols=46  Identities=17%  Similarity=0.196  Sum_probs=40.9

Q ss_pred             hhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           86 CVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        86 alt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      .+.+++-..+--+.+.++++++|||++++.+++|+++.+.|+..-+
T Consensus        62 gvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         62 SVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4667787788889999999999999999999999999999998743

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.72  E-value=0.00093  Score=51.93  Aligned_cols=70  Identities=14%  Similarity=0.120  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           64 WYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        64 ~~~~~~~~~~~~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                      +..++.|++=..-|.....   +||..+..+..+.--.++.++|+++++++.++.|++|+.+++.|+..-...
T Consensus        80 w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s  152 (334)
T PF06027_consen   80 WKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS  152 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence            4444456666666766666   899999999999999999999999999999999999999999998865433

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.70  E-value=0.00041  Score=46.82  Aligned_cols=41  Identities=17%  Similarity=0.278  Sum_probs=33.7

Q ss_pred             hHHHHHhHHH--hhCccccchhhhhHHHHHHHHHHHhhhhhhc
Q 041827           97 GAIAVVVSIL--IFRNLVYITGMSGYTLTIIGVILYKEAKKQS  137 (138)
Q Consensus        97 ~v~~i~~s~~--~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~~~  137 (138)
                      .+.+.+.++.  +|||++|+.+++|+++.+.|++.-+..+.++
T Consensus        85 ~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~  127 (129)
T PRK02971         85 YALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKA  127 (129)
T ss_pred             HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCC
Confidence            5566666664  8999999999999999999999987665554

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.64  E-value=0.0017  Score=42.62  Aligned_cols=38  Identities=11%  Similarity=0.182  Sum_probs=34.8

Q ss_pred             hhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           93 WKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        93 ~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      ..+.++.+.+.|+++|||++|+++++|+++.+.|+..-
T Consensus        70 ~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         70 LSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999764

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.56  E-value=0.0014  Score=49.74  Aligned_cols=122  Identities=13%  Similarity=0.078  Sum_probs=74.5

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNF   81 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f   81 (138)
                      ++++|+...+..|+.. +.++.+..  ...++..++.........+.        .+++..+..-+++|++=-..|.+.|
T Consensus         9 a~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~--------~~~~~~~~~g~l~G~~w~ig~~~~~   77 (290)
T TIGR00776         9 PALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPE--------FWALSIFLVGLLSGAFWALGQINQF   77 (290)
T ss_pred             HHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCc--------ccccHHHHHHHHHHHHHHhhhhhHH
Confidence            5788999999999886 57777665  33344444333332221111        1112223333444443222455555


Q ss_pred             H---hhh-hhHHhhhhhhhhHHHHHhHHHhhCccccchh----hhhHHHHHHHHHHHhhhh
Q 041827           82 L---HTM-CVWLSSSWKCKGAIAVVVSILIFRNLVYITG----MSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        82 ~---~ts-alt~sv~~~~k~v~~i~~s~~~f~~~~t~~~----~~G~~l~~~Gv~~Y~~~k  134 (138)
                      .   +++ ++.+.+.....++...+.+.++|||+.+.++    ++|.+++++|+.+....|
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            4   222 2222233557777888999999999999999    999999999999876554

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.50  E-value=0.004  Score=40.53  Aligned_cols=50  Identities=12%  Similarity=0.069  Sum_probs=43.4

Q ss_pred             hhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           84 TMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        84 tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                      --.+.+++-..+--+.+.++|+++|||++++.+++|+.+.+.|+..-+..
T Consensus        54 p~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         54 PVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            33467888888888999999999999999999999999999999876543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.42  E-value=0.0062  Score=39.95  Aligned_cols=48  Identities=13%  Similarity=0.092  Sum_probs=41.1

Q ss_pred             hHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           87 VWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        87 lt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      +.+++-..+--+.+.+.|+++|||++++.+++|+.+.+.|+..-+...
T Consensus        58 iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         58 IAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            456666666788899999999999999999999999999999876543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.40  E-value=0.015  Score=44.10  Aligned_cols=122  Identities=14%  Similarity=0.199  Sum_probs=79.1

Q ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH----hchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHH
Q 041827            4 PAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLI----MEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKL   78 (138)
Q Consensus         4 ~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~   78 (138)
                      +..++|...=|++  ++|+.+-+..    -+..+.|.++.    .|.+.  ...+  ....+.+.++..+|...-. ...
T Consensus       158 ~sf~~Ygl~RK~~--~v~a~~g~~l----E~l~l~p~al~yl~~l~~~~--~~~~--~~~~~~~~LLv~aG~vTavpL~l  227 (293)
T COG2962         158 LSFGLYGLLRKKL--KVDALTGLTL----ETLLLLPVALIYLLFLADSG--QFLQ--QNANSLWLLLVLAGLVTAVPLLL  227 (293)
T ss_pred             HHHHHHHHHHHhc--CCchHHhHHH----HHHHHhHHHHHHHHHHhcCc--hhhh--cCCchHHHHHHHhhHHHHHHHHH
Confidence            4566676666655  5777654332    23334444432    22211  0111  1223345666666665543 333


Q ss_pred             HHHH--hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhh
Q 041827           79 TNFL--HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKK  135 (138)
Q Consensus        79 ~~f~--~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~  135 (138)
                      ..--  +.+=-+..+.+-..|....+++++++|||++..+....+..-+|...|+.+..
T Consensus       228 f~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l  286 (293)
T COG2962         228 FAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL  286 (293)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222  77777888999999999999999999999999999999999999999987643

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.27  E-value=0.0034  Score=47.67  Aligned_cols=129  Identities=14%  Similarity=0.123  Sum_probs=86.8

Q ss_pred             hHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHH----HHHHHhchhh--------HHHHHHhh---hhhhHHHHH
Q 041827            3 IPAWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFLI----PAVLIMEKDV--------VGITIALA---KQDVEFLWY   65 (138)
Q Consensus         3 ~~~~a~~~v~~k~~l~--~~~~~~l~~~~~~~~~~~l~----~~~~~~e~~~--------~~~~~~~~---~~~~~~~~~   65 (138)
                      ...-|++.+.-+|.++  +++|.+..-|-..++..++.    |+..+--++.        +.++.+..   ...+.  ..
T Consensus       185 qiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~--l~  262 (372)
T KOG3912|consen  185 QIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPS--LA  262 (372)
T ss_pred             HHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCch--hH
Confidence            3456778888777777  79999999999998855433    3322211111        11111111   11121  11


Q ss_pred             HHHHHH-HHH-HHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           66 LIFNSS-LAY-FVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        66 ~~~~~~-~~~-~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                      +.+.+. ... ++|...-.   ..||.|=.+.-.+|..++=+++.....|.+...|+.|.++-+.|.+.|+-.
T Consensus       263 val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~i  335 (372)
T KOG3912|consen  263 VALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQI  335 (372)
T ss_pred             HHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222221 122 25655444   899999999999999999999999999999999999999999999999743

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.27  E-value=0.0095  Score=39.68  Aligned_cols=47  Identities=19%  Similarity=0.252  Sum_probs=40.4

Q ss_pred             hHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           87 VWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        87 lt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                      +.+++-..+--+.+.+.|+++|||++++.+++|+.+.+.|+..-+..
T Consensus        58 iAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         58 VAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            45666666678889999999999999999999999999999886553

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.10  E-value=0.022  Score=37.08  Aligned_cols=48  Identities=21%  Similarity=0.168  Sum_probs=42.2

Q ss_pred             hhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           86 CVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        86 alt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                      .+.+++-...=-+.+.+.|+++|||++++.+++|+.+.+.|+..-+..
T Consensus        57 gvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          57 GVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            356778888888999999999999999999999999999999876543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.95  E-value=0.051  Score=42.35  Aligned_cols=113  Identities=11%  Similarity=0.087  Sum_probs=79.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHh----hhhhhHHHHHHHHHHHHHHHHHHHHHH---hhhhhHHhh
Q 041827           19 KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIAL----AKQDVEFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSS   91 (138)
Q Consensus        19 ~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~n~~~f~---~tsalt~sv   91 (138)
                      ++.|-...+..-..-.++.+...+..|+.........    .-..+.-...+.+-+++-...|-..|.   +.+|.|++|
T Consensus        44 ~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqV  123 (345)
T KOG2234|consen   44 MFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQV  123 (345)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhh
Confidence            3667777777776666666665544432200111110    011121234455566666677777777   899999999


Q ss_pred             hhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHh
Q 041827           92 SWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK  131 (138)
Q Consensus        92 ~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~  131 (138)
                      ..++|-.-+.++++++++++++++||.-.++-+.|+..-+
T Consensus       124 t~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen  124 TYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999998866

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.68  E-value=0.057  Score=36.75  Aligned_cols=116  Identities=21%  Similarity=0.257  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH--
Q 041827            6 WALRTVLQGILLSKV-NSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL--   82 (138)
Q Consensus         6 ~a~~~v~~k~~l~~~-~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~--   82 (138)
                      -+++..+.-++-++. ||+.-.+.+...+++.+.....+.++++.    +..++.   .++..+.|++|..+-.+..+  
T Consensus        13 i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~----~~~~~~---p~w~~lGG~lG~~~V~~~~~~v   85 (138)
T PF04657_consen   13 IALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSL----ASLSSV---PWWAYLGGLLGVFFVLSNIILV   85 (138)
T ss_pred             HHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc----chhccC---ChHHhccHHHHHHHHHHHHHHh
Confidence            344444444444434 59999999999999988888776665421    111111   23444588888774444443  


Q ss_pred             -hhhhhHHhhhhhhhhHHHHHhHHHh--h---CccccchhhhhHHHHHHHHH
Q 041827           83 -HTMCVWLSSSWKCKGAIAVVVSILI--F---RNLVYITGMSGYTLTIIGVI  128 (138)
Q Consensus        83 -~tsalt~sv~~~~k~v~~i~~s~~~--f---~~~~t~~~~~G~~l~~~Gv~  128 (138)
                       +.++.+..+....-++..-++=--+  |   ++|+++.++.|..+.+.|+.
T Consensus        86 p~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~  137 (138)
T PF04657_consen   86 PRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI  137 (138)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence             6666665555444444444333332  2   46799999999999999986

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.60  E-value=0.00019  Score=53.99  Aligned_cols=115  Identities=12%  Similarity=0.150  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH---h
Q 041827            7 ALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL---H   83 (138)
Q Consensus         7 a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~---~   83 (138)
                      ..-.++.++.+ +.||+++-..+...-.....|..+....+-      ..+...  =.++++=|+.|+.--...|+   +
T Consensus        50 ~~~~vv~t~~~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v------~gp~g~--R~~LiLRg~mG~tgvmlmyya~~~  120 (346)
T KOG4510|consen   50 NSCMVVSTKVL-ENDPMELASFRLLVRMLITYPCLIYYMQPV------IGPEGK--RKWLILRGFMGFTGVMLMYYALMY  120 (346)
T ss_pred             hhHHHhhhhhh-ccChhHhhhhhhhhehhhhheEEEEEeeee------ecCCCc--EEEEEeehhhhhhHHHHHHHHHhh
Confidence            33445555555 577777777763333333333221111110      010000  02345566667665555555   3


Q ss_pred             hhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           84 TMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        84 tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      -|---+.++.-..|++++++++.+++||.|..+.+|..+++.|+.+-
T Consensus       121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLI  167 (346)
T KOG4510|consen  121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLI  167 (346)
T ss_pred             cchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEE
Confidence            34344556666779999999999999999999999999999998764

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.19  E-value=0.07  Score=33.72  Aligned_cols=37  Identities=14%  Similarity=0.056  Sum_probs=22.7

Q ss_pred             hhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHH
Q 041827           86 CVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTL  122 (138)
Q Consensus        86 alt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l  122 (138)
                      .+.+.+....-.+.+.+.|.++|||++|+.++.|+.+
T Consensus        56 ~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   56 SVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            3456666667789999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.18  E-value=0.023  Score=44.68  Aligned_cols=128  Identities=14%  Similarity=0.176  Sum_probs=86.7

Q ss_pred             chHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHH----
Q 041827            2 DIPAWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLA----   73 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~----~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   73 (138)
                      +++.-|.+.++-|+-..    ++|--...-|...+..+++-|...+.+.-...+ .+. +.... ...++++++.+    
T Consensus       255 sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-F~l-P~~~q-~~~vv~~~ligtvvS  331 (416)
T KOG2765|consen  255 SALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-FEL-PSSTQ-FSLVVFNNLIGTVVS  331 (416)
T ss_pred             HHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-ccC-CCCce-eEeeeHhhHHHHHHH
Confidence            46677888888888876    577777788999999999998877665332111 111 11111 12233344444    


Q ss_pred             -HHHHHHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhh
Q 041827           74 -YFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEA  133 (138)
Q Consensus        74 -~~~n~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~  133 (138)
                       |++-...+ .|||++..+..++.--+.++.=.++=|.+.|+..++|....++|.+.-++.
T Consensus       332 DylW~~a~~-lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  332 DYLWAKAVL-LTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             HHHHHHHHH-hccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecc
Confidence             33444444 899999888888765556655566667889999999999999999887655

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=95.15  E-value=0.062  Score=40.51  Aligned_cols=120  Identities=15%  Similarity=0.242  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHHHHH-
Q 041827            5 AWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYF-VKLTNFL-   82 (138)
Q Consensus         5 ~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~n~~~f~-   82 (138)
                      +-|.-|+..+.+.++.|-.+++-..+.+++++-..= ++.|..+...    ...+.. ....+...++-|+ |.+.--. 
T Consensus       177 lYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~t----l~w~~~-i~~yl~f~L~MFllYsl~pil~  250 (336)
T KOG2766|consen  177 LYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVST----LHWDSA-IFLYLRFALTMFLLYSLAPILI  250 (336)
T ss_pred             eeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-Hhhhccceee----EeehHH-HHHHHHHHHHHHHHHHhhHHhe
Confidence            345667778888889999999999999998876665 4666543211    111111 1111223333344 4444444 


Q ss_pred             -hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhh
Q 041827           83 -HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKE  132 (138)
Q Consensus        83 -~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~  132 (138)
                       .+||+.+++.--..+.-.+++  ..||-++.|.-.+..+....|.+.|+.
T Consensus       251 k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  251 KTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             ecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence             788888888777777777776  788999999999999999999999953

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.86  E-value=0.04  Score=43.42  Aligned_cols=74  Identities=12%  Similarity=0.098  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhhh
Q 041827           62 FLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKK  135 (138)
Q Consensus        62 ~~~~~~~~~~~~~~~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k~  135 (138)
                      ..+..+.-|.+=|.-|+....   .|+.-+..|....-..+++.++.++-+|++|+...++..+++.|+++-+..+.
T Consensus       158 ~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  158 TAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence            345556666666666766655   89999999999999999999999999999999999999999999988766644

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=93.79  E-value=0.8  Score=35.16  Aligned_cols=67  Identities=12%  Similarity=0.183  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHH
Q 041827           63 LWYLIFNSSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVIL  129 (138)
Q Consensus        63 ~~~~~~~~~~~~~~n~~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~  129 (138)
                      |+.-+..-.+|-..|...+-..++.-.+=.+.+--+...+++..++||+++...+.|.++++.|...
T Consensus        53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l  119 (300)
T PF05653_consen   53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL  119 (300)
T ss_pred             HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence            3333333344555666666423333344456666788899999999999999999999999999875

>PRK13499 rhamnose-proton symporter; Provisional

Probab=92.76  E-value=3.9  Score=32.13  Aligned_cols=126  Identities=11%  Similarity=0.014  Sum_probs=65.5

Q ss_pred             chHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH--HhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 041827            2 DIPAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVL--IMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLT   79 (138)
Q Consensus         2 a~~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~   79 (138)
                      +.+|++...+-+|+.  +--++|...-..-+-.-++.|+..  +.+ +.+.+..+.  .++..+..-+++|++=-.-|..
T Consensus        15 ~~~~~GS~~~p~K~~--k~w~wE~~W~v~gi~~wl~~~~~~g~~~~-~~f~~~~~~--~~~~~~~~~~l~G~~W~iG~i~   89 (345)
T PRK13499         15 GGASSGSFYAPFKKV--KKWSWETMWSVGGIFSWLILPWLIAALLL-PDFWAYYSS--FSGSTLLPVFLFGALWGIGGIT   89 (345)
T ss_pred             HHHHhhccccccccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHh--cCHHHHHHHHHHHHHHHhhhhh
Confidence            356666666777773  344555552222221223444222  122 222222221  2333344444455443334444


Q ss_pred             HHH----hhhhhHHhhhhhhhhHHHHHhHHHhhCcc---cc----chhhhhHHHHHHHHHHHhh
Q 041827           80 NFL----HTMCVWLSSSWKCKGAIAVVVSILIFRNL---VY----ITGMSGYTLTIIGVILYKE  132 (138)
Q Consensus        80 ~f~----~tsalt~sv~~~~k~v~~i~~s~~~f~~~---~t----~~~~~G~~l~~~Gv~~Y~~  132 (138)
                      .+.    .--++++.+..-+.-+...+++.+++||-   ++    .....|.++.++|+.+-++
T Consensus        90 ~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         90 YGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            444    22234444555555777888888888852   23    3468899999999999776

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.72  E-value=2.3  Score=29.40  Aligned_cols=123  Identities=13%  Similarity=0.138  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH--
Q 041827            6 WALRTVLQGILLSKV-NSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL--   82 (138)
Q Consensus         6 ~a~~~v~~k~~l~~~-~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~--   82 (138)
                      -.+++-.--++.+.. ||+--...........+....++.|+..-..   .....   .++....|++|..+-..+-.  
T Consensus        17 l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a---~~~~~---pwW~~~GG~lGa~~vt~s~~l~   90 (150)
T COG3238          17 LPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA---AVASA---PWWAWIGGLLGAIFVTSSILLA   90 (150)
T ss_pred             hhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh---hccCC---chHHHHccchhhhhhhhhHHhc
Confidence            334444434444323 5877777778887877777776655432111   11222   24445677877553332222  


Q ss_pred             -hhhhhHHhhhhhhhhHHHHHhHHHh--hC---ccccchhhhhHHHHHHHHHHHhhhh
Q 041827           83 -HTMCVWLSSSWKCKGAIAVVVSILI--FR---NLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        83 -~tsalt~sv~~~~k~v~~i~~s~~~--f~---~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                       +.++.+.-.....-++..-++--.+  ||   +|+++..+.|+++.+.|++.-+..+
T Consensus        91 p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          91 PRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence             4544444443333333222222211  22   5689999999999999966655443

>TIGR00688 rarD rarD protein

Probab=92.64  E-value=2  Score=31.62  Aligned_cols=25  Identities=8%  Similarity=-0.085  Sum_probs=23.0

Q ss_pred             hhhhhHHhhhhhhhhHHHHHhHHHh
Q 041827           83 HTMCVWLSSSWKCKGAIAVVVSILI  107 (138)
Q Consensus        83 ~tsalt~sv~~~~k~v~~i~~s~~~  107 (138)
                      +.+|...++...+.|++..+.+++.
T Consensus       231 ~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       231 RLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             cCChHHHHHHHHHHHHHHHHHHHHh
Confidence            8999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=92.40  E-value=3.8  Score=31.10  Aligned_cols=70  Identities=20%  Similarity=0.230  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--------hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchh----hhhHHHHHHHHHHH
Q 041827           63 LWYLIFNSSLAYFVKLTNFL--------HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG----MSGYTLTIIGVILY  130 (138)
Q Consensus        63 ~~~~~~~~~~~~~~n~~~f~--------~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~----~~G~~l~~~Gv~~Y  130 (138)
                      +..-+++|++=-.-|..+|.        ++-|++...    .=+...+.++++|||.-+..+    ..++++.++|+.+-
T Consensus        45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~----QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lt  120 (269)
T PF06800_consen   45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGL----QLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILT  120 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhH----HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            34445555544334444444        677776665    234477899999999766544    45788889999987


Q ss_pred             hhhhhh
Q 041827          131 KEAKKQ  136 (138)
Q Consensus       131 ~~~k~~  136 (138)
                      ++.+++
T Consensus       121 s~~~~~  126 (269)
T PF06800_consen  121 SYQDKK  126 (269)
T ss_pred             cccccc
Confidence            776554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=90.85  E-value=0.085  Score=40.04  Aligned_cols=122  Identities=9%  Similarity=0.067  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH-
Q 041827            4 PAWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL-   82 (138)
Q Consensus         4 ~~~a~~~v~~k~~l~~~~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~-   82 (138)
                      ++.|.--+.-+++-++.|....+.|-+.++.+-.+........-+++   +-.++    ++++...|+.||..++..-. 
T Consensus       201 lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP---~cgkd----r~l~~~lGvfgfigQIllTm~  273 (346)
T KOG4510|consen  201 LFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLP---HCGKD----RWLFVNLGVFGFIGQILLTMG  273 (346)
T ss_pred             hhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecC---ccccc----eEEEEEehhhhhHHHHHHHHH
Confidence            33344445555555566666666666666655444332211101110   11122    34555667777775554433 


Q ss_pred             ----hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           83 ----HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        83 ----~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                          +.+|.  +++....-++..+--+++|||-.|+..+.|+++.+....|-...|
T Consensus       274 lQiErAGpv--aim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  274 LQIERAGPV--AIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             hhhhccCCe--ehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence                55554  566677778888888999999999999999998888877765554

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=89.28  E-value=1.2  Score=34.16  Aligned_cols=48  Identities=8%  Similarity=0.034  Sum_probs=42.0

Q ss_pred             hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHH
Q 041827           83 HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILY  130 (138)
Q Consensus        83 ~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y  130 (138)
                      .|+|.++...-..--+++-+.|..+++++++..||+|+..+.+|+..-
T Consensus       109 lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviV  156 (372)
T KOG3912|consen  109 LTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIV  156 (372)
T ss_pred             HhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhee
Confidence            788888887777667888889999999999999999999999998763

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=87.27  E-value=0.65  Score=30.60  Aligned_cols=38  Identities=13%  Similarity=0.104  Sum_probs=30.7

Q ss_pred             hhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHH
Q 041827           91 SSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVI  128 (138)
Q Consensus        91 v~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~  128 (138)
                      +.|.+.=+++.+.+.++.+|..++..++|+.+++.|+.
T Consensus        73 i~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~  110 (113)
T PF10639_consen   73 IANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVA  110 (113)
T ss_pred             HHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCee
Confidence            34455577888888777777788899999999999975

Many members are annotated as potential transmembrane proteins.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=86.21  E-value=3.9  Score=31.65  Aligned_cols=121  Identities=12%  Similarity=0.024  Sum_probs=73.1

Q ss_pred             HHHHHHHHHhc--------CC-CHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 041827            8 LRTVLQGILLS--------KV-NSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKL   78 (138)
Q Consensus         8 ~~~v~~k~~l~--------~~-~~~~l~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~   78 (138)
                      ...++|+++++        +. +|.-+.+.+...+.+.-..  .+...+..   ......+...+..-+.+.+.+.+.-.
T Consensus        28 ~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~--~l~~~k~~---~~~~apl~~y~~is~tn~~s~~~~ye  102 (327)
T KOG1581|consen   28 TWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYA--MLKWWKKE---LSGVAPLYKYSLISFTNTLSSWCGYE  102 (327)
T ss_pred             HHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHH--HHhccccc---CCCCCchhHHhHHHHHhhcchHHHHH
Confidence            35678888886        22 4555666666554433311  11111110   00001111122333344444443323


Q ss_pred             HHHHhhhhhHHhhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           79 TNFLHTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        79 ~~f~~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      +-. +.|=-|.-++=+.|-+.+++.+.++.|.+.++....-..+.-.|+..++..+
T Consensus       103 aLK-yvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~  157 (327)
T KOG1581|consen  103 ALK-YVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFP  157 (327)
T ss_pred             HHH-hccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEec
Confidence            333 6666778888999999999999999999999999999999999998876553

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=82.22  E-value=11  Score=24.49  Aligned_cols=94  Identities=14%  Similarity=0.020  Sum_probs=53.3

Q ss_pred             HHHHHHHhchhhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHH-hhhhhHHhhhhhhhhHHHHHhHHHhhCccccch
Q 041827           37 LIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKLTNFL-HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYIT  115 (138)
Q Consensus        37 l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~f~-~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~  115 (138)
                      ++..+-+.|-..-.-.|...|.+.+.++.+.....++..--+.++. ....=.++..|-+=-+..++=.+.+-|++.+..
T Consensus         7 lF~lAalaEIgG~yl~W~wlR~~k~~~~~~~G~~~L~lfg~l~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~   86 (107)
T PF02694_consen    7 LFVLAALAEIGGCYLVWLWLREGKSPWWLLPGALSLALFGWLLTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW   86 (107)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCeeeHhhHHHHHHHHHHHhhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH
Confidence            3333345553222223333344333334433333333222333343 233334566666666777777788889999999


Q ss_pred             hhhhHHHHHHHHHHH
Q 041827          116 GMSGYTLTIIGVILY  130 (138)
Q Consensus       116 ~~~G~~l~~~Gv~~Y  130 (138)
                      .++|.++++.|+..-
T Consensus        87 D~iGa~i~L~G~~iI  101 (107)
T PF02694_consen   87 DWIGAAICLVGVAII  101 (107)
T ss_pred             HHHhHHHHHHhHHhe
Confidence            999999999998764

; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=81.16  E-value=22  Score=27.06  Aligned_cols=53  Identities=17%  Similarity=0.153  Sum_probs=36.1

Q ss_pred             HHHHHHH---hhhhhHHhhhhhhhhHHHHHhHHHhhCccccchh----hhhHHHHHHHHH
Q 041827           76 VKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG----MSGYTLTIIGVI  128 (138)
Q Consensus        76 ~n~~~f~---~tsalt~sv~~~~k~v~~i~~s~~~f~~~~t~~~----~~G~~l~~~Gv~  128 (138)
                      -|...+.   ..+.-+.=..+.+-.++..+.+.+++||+=+.++    .+|.++.+.|..
T Consensus       208 gnl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  208 GNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            4444444   4444444455666688999999999999877665    567777777764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	138
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.06
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.91

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.06  E-value=1.1e-05  Score=54.03  Aligned_cols=52  Identities=12%  Similarity=0.027  Sum_probs=34.4

Q ss_pred             hhhhhHHhhh-hhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           83 HTMCVWLSSS-WKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        83 ~tsalt~sv~-~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      +.++-....+ ..+-|++++++|+++|||++|+.+++|+++.+.|++..+..+
T Consensus        53 ~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           53 YIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             hCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3333333333 678899999999999999999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.91  E-value=8.7e-05  Score=47.67  Aligned_cols=45  Identities=13%  Similarity=0.109  Sum_probs=40.1

Q ss_pred             hhhhhhhhHHHHHhHHHhhCccccchhhhhHHHHHHHHHHHhhhh
Q 041827           90 SSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK  134 (138)
Q Consensus        90 sv~~~~k~v~~i~~s~~~f~~~~t~~~~~G~~l~~~Gv~~Y~~~k  134 (138)
                      .+...+-++.+.++|+++|||++|+.+++|+.+.+.|+...+..+
T Consensus        61 ~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           61 AIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            343678899999999999999999999999999999999987654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00