Citrus Sinensis ID: 041828

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MLNPTPESIKKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALRNDDDKSRLD
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccHHHcc
Coil and Loop (DISEMBL)
mlnptpesIKKIWDNWNIRAVLVLFAPlrkatgnkLIISVIWSAYLIADWAANFgvgliterardtptaeysskqqpaeNNELLAFWATFFMLhlggpdtiTAFALEDNELCLRHLFGFIFQAVAAVYIFLTslpgnklffpTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVekhgfnefdVCVTYTLFLGAIALDIIAFFKLVFSDWTfvalrndddksrld
Flexible Loop (DISEMBL)
MLNPTPESIKKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITERARDTPTAeysskqqpaeNNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFvalrndddksrld
Low Complexity Region (SEG)
MLNPTPESIKKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALRNDDDKSRLD
Disordered region (IsUnstruct)
********IKKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITE********************ELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALR*********
Disordered Region (DISOPRED)
*****PE**KKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITERA******************ELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEK***SALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALRNDDD*****
Disordered Region (DISEMBL)
MLNPTPESIKKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITERAR************PAENNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALRNDDDKSRLD
Disordered Region (DISPRO)
**NPTPESIKKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITER*****************NNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALRNDD******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLNPTPESIKKIWDNWNIRAVLVLFAPLRKATGNKLIISVIWSAYLIADWAANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALRNDDDKSRLD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
302143091	442	unnamed protein product [Vitis vinifera]	0.942	0.626	0.441	1e-62
302143093	446	unnamed protein product [Vitis vinifera]	0.952	0.627	0.424	5e-62
255575740	769	conserved hypothetical protein [Ricinus	0.595	0.227	0.550	6e-52
297794717	701	hypothetical protein ARALYDRAFT_356466 [	0.918	0.385	0.380	1e-51
297800144	992	hypothetical protein ARALYDRAFT_914755 [	0.948	0.281	0.370	1e-51
302143098	643	unnamed protein product [Vitis vinifera]	0.850	0.388	0.365	1e-50
297791187	838	hypothetical protein ARALYDRAFT_494437 [	0.571	0.200	0.526	5e-48
297791171	749	predicted protein [Arabidopsis lyrata su	0.935	0.367	0.393	6e-48
224147176	667	predicted protein [Populus trichocarpa]	0.959	0.422	0.370	3e-47
15242414	877	uncharacterized protein [Arabidopsis tha	0.574	0.192	0.524	5e-47

>gi|302143091|emb|CBI20386.3| unnamed protein product [Vitis vinifera]

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/324 (44%), Positives = 188/324 (58%), Gaps = 47/324 (14%)

Query: 2   LNPTPESIKKIWDNWNIRA----------VLVLFAPLRKATGNKLIISVIWSAYLIADWA 51
           +N  P  +K+IWD WN+R           +L+  A  RK TGN ++  +IWS YL+ADW 
Sbjct: 1   MNIFPLFLKEIWDEWNLRGAVLVSLFFQILLIFCASSRKRTGNMIMTFIIWSVYLLADWV 60

Query: 52  ANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNEL 111
           A F VGLI    +D          +  +N++LLAFWA F +LHLGGPDTITAFALEDNEL
Sbjct: 61  AAFAVGLIANGNKDG--------DKQVQNDDLLAFWAPFLLLHLGGPDTITAFALEDNEL 112

Query: 112 CLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKF-- 169
            LRHL G + Q +A  Y+FL S+  N L+ PT L+ +AGTIKY ER RALYLA + K   
Sbjct: 113 WLRHLLGLVIQFIAVAYVFLESI-SNDLWIPTILMLVAGTIKYAERTRALYLACLVKIII 171

Query: 170 ----RDSA--------LRGEVEHLKRIRSLQKKN-----------EKALGIIEVELNLVY 206
               R S          +G +  L  + S Q++N           EKA  +IEVELN +Y
Sbjct: 172 APEKRASTSASSFFKIFKGLIVDL--MFSFQERNDSRKFFFGMLPEKAFRVIEVELNFMY 229

Query: 207 EVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIAL 266
           + L+TK+ V +  +    RFIC   +  AL +F     KH  ++FD+ VTY L +GAI L
Sbjct: 230 DALYTKMAVVNRKIGYFFRFICTGCIAVALQLFASH-HKHKIHKFDIGVTYALLIGAIGL 288

Query: 267 DIIAFFKLVFSDWTFVALRNDDDK 290
           D+IA  KL+FSDWT V L+N   K
Sbjct: 289 DVIAIVKLIFSDWTIVLLKNSTAK 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143093|emb|CBI20388.3| unnamed protein product [Vitis vinifera]

 Score =  243 bits (621), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/332 (42%), Positives = 192/332 (57%), Gaps = 52/332 (15%)

Query: 2   LNPTPESIKKIWDNWNIRA----------VLVLFAPLRKATGNKLIISVIWSAYLIADWA 51
           +N  P+ +K+IW+ WN+R           +L+  A  RK TGN ++  +IWS YL+ADW 
Sbjct: 1   MNIFPQYLKEIWNKWNLRGAVLVSLFFQILLIFCASSRKRTGNAIMTFIIWSVYLLADWV 60

Query: 52  ANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNEL 111
           A F VGLI    +D          +  ++++LLAFWA F +LHLGGPD ITAFALEDNEL
Sbjct: 61  AAFAVGLIANGNKDG--------DKQVQSDDLLAFWAPFLLLHLGGPDNITAFALEDNEL 112

Query: 112 CLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASME---- 167
             RHL G + Q +A  Y+FL S+  N L+ PT L+ +AGTIKY ER RALYLA +E    
Sbjct: 113 WPRHLLGLVIQFIAVAYVFLESI-SNDLWIPTILMLVAGTIKYAERTRALYLACLEAHVP 171

Query: 168 ---------KFRDSA------LRGEVEHLKRIRSLQKKN-----------EKALGIIEVE 201
                    +   SA       +G +  L  + S Q++N           EKA  +IEVE
Sbjct: 172 VKIIIAPEKRVSTSASSFFKIFKGLIVDL--MFSFQERNDSRKFFFGMLPEKAFRVIEVE 229

Query: 202 LNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFL 261
           LN +Y+ L+TK+ V +  +   LRFIC   +  AL +F     KH  ++FD+ VTY L +
Sbjct: 230 LNFMYDALYTKMVVVNRKIGYFLRFICTGCIAVALQLFSSH-HKHKIHKFDIGVTYALLI 288

Query: 262 GAIALDIIAFFKLVFSDWTFVALRNDDDKSRL 293
           GAI+LD+IA  KL+FSDWT V L+N   K R+
Sbjct: 289 GAISLDVIAIVKLIFSDWTIVLLKNSTAKERI 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575740|ref|XP_002528769.1| conserved hypothetical protein [Ricinus communis] gi|223531772|gb|EEF33591.1| conserved hypothetical protein [Ricinus communis]

 Score =  210 bits (534), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 103/187 (55%), Positives = 130/187 (69%), Gaps = 12/187 (6%)

Query: 1   MLNPTPESIKKIWDNWNIRAVLVL----------FAPLRKATGNKLIISVIWSAYLIADW 50
           M+NP P+S+KKIW++WNIR  L+           FAP RK T  KLII +IWS YL+AD 
Sbjct: 1   MVNPIPDSVKKIWEHWNIRGALMFSLLLQTLLVLFAPSRKRTSRKLIILLIWSGYLLADA 60

Query: 51  AANFGVGLITERARD--TPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALED 108
            A F VGLI+    +  +      +K    EN++LLAFWA F ++HLGGPDTITAFALED
Sbjct: 61  TATFAVGLISNSQSNFGSDRKAQKTKNSDRENSDLLAFWAPFLLVHLGGPDTITAFALED 120

Query: 109 NELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEK 168
           NEL LRHL   +FQAVA  Y+F+ +LP NK+  PT L+F+AG IKY ER R+LYLASM++
Sbjct: 121 NELWLRHLLALVFQAVATGYVFIQTLPENKVMIPTFLLFLAGIIKYSERTRSLYLASMDR 180

Query: 169 FRDSALR 175
           FRDS L+
Sbjct: 181 FRDSMLK 187

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794717|ref|XP_002865243.1| hypothetical protein ARALYDRAFT_356466 [Arabidopsis lyrata subsp. lyrata] gi|297311078|gb|EFH41502.1| hypothetical protein ARALYDRAFT_356466 [Arabidopsis lyrata subsp. lyrata]

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/302 (38%), Positives = 177/302 (58%), Gaps = 32/302 (10%)

Query: 1   MLNPTPESIKKIWDNWNIRAV----------LVLFAPLRKATGNKLIISVIWSAYLIADW 50
           M+   P  IK +WD WNIR +          L++ APLRK T N+ +  V+W +YL+ADW
Sbjct: 1   MVQVIPAHIKDVWDAWNIRGIVILSLSIQTILIILAPLRKRTSNRFLALVLWLSYLLADW 60

Query: 51  AANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNE 110
           +ANF +GLI +        +      P ++ +L+A WA F +LHLGGPDTITA++LEDN 
Sbjct: 61  SANFVIGLIAKN-----QGKELKPDDPPQDQQLMALWAPFLLLHLGGPDTITAYSLEDNA 115

Query: 111 LCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFR 170
           L  RH  G   QA++  Y+ + SLP N L+    L+FIAGT+K      +L + ++  F 
Sbjct: 116 LWHRHFLGLALQALSGAYVVIQSLP-NPLWVIILLLFIAGTLK------SLMVNNI--FS 166

Query: 171 DSALRGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFC 230
                   E   ++      +E+AL I+E+EL  +YE L+TK+ V H+ +  + R I   
Sbjct: 167 SDQREESREFFSKL-----TDEEALRILEMELGFIYEGLYTKVSVLHTWVGALTRTIALG 221

Query: 231 SVVAALSVFHFQVEK-HGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALR--ND 287
           S+++A  +FH++ +K H F+  D+ +TYTLFL  IALD+++   ++ SDWTF  +   N+
Sbjct: 222 SLLSAFCMFHYRPKKSHEFHRADIVITYTLFLVGIALDLVSLLMILPSDWTFAVISRINE 281

Query: 288 DD 289
           D+
Sbjct: 282 DE 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800144|ref|XP_002867956.1| hypothetical protein ARALYDRAFT_914755 [Arabidopsis lyrata subsp. lyrata] gi|297313792|gb|EFH44215.1| hypothetical protein ARALYDRAFT_914755 [Arabidopsis lyrata subsp. lyrata]

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/370 (37%), Positives = 184/370 (49%), Gaps = 91/370 (24%)

Query: 1   MLNPTPESIKKIWDNWNIRA----------VLVLFAPLRKATGNKLIISVIWSAYLIADW 50
           M+   P+ +K IWD WNIR           +LVL +P RK T  +L+  ++WSAYL+A+W
Sbjct: 1   MVEAIPKGVKDIWDKWNIRGLVIFSLVFQTILVLLSPNRKRTPRRLLRLLLWSAYLLANW 60

Query: 51  AANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNE 110
           AA++ VG I++ A D P    S K      NELLAFWATF +LHLGGPDTITA ALEDNE
Sbjct: 61  AADYAVGQISDSAGDDPEPNESPK-----TNELLAFWATFLLLHLGGPDTITALALEDNE 115

Query: 111 LCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLAS----- 165
           L LR+LFG + Q +A +Y+FL S+P N L  PT+L+ +AG IKY ERI+A+  AS     
Sbjct: 116 LWLRNLFGLLCQFIATLYVFLLSIP-NSLLVPTSLMLMAGLIKYTERIQAMRRASLRRFK 174

Query: 166 ----------------MEKFRDSALRGEVEHLKRIRSLQKKN------------------ 191
                           ME+++   L  E   L R+   +K+                   
Sbjct: 175 DSMLGEPEPGIDYSRFMEEYKIRKLSKERSQLVRVEEREKEQGARVPVRPEVITHLQVVQ 234

Query: 192 -----------------------------------EKALGIIEVELNLVYEVLHTKIQVT 216
                                              E AL I+EVEL+ +Y  L TK+ + 
Sbjct: 235 YAYKYFNIYKGLVVDFIYSSQQWIESKLFFQSLSAEDALRILEVELSFIYGTLFTKVDIL 294

Query: 217 HSVLAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVF 276
           H+ +    R I    + A+L +F     K G++ FDV +TY L  G IALD I+      
Sbjct: 295 HTWIGAASRCIALGCLFASLYIFK-TSRKDGYDCFDVGLTYALIFGGIALDFISILIYCV 353

Query: 277 SDWTFVALRN 286
           SDWTF  LR 
Sbjct: 354 SDWTFARLRK 363

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143098|emb|CBI20393.3| unnamed protein product [Vitis vinifera]

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/345 (36%), Positives = 169/345 (48%), Gaps = 95/345 (27%)

Query: 1   MLNPTPESIKKIWDNWNIRA----------VLVLFAPLRKATGNKLIISVIWSAYLIADW 50
           M N  PE +KK+WD WN+R           +L+  AP RK  GN  +  +IWSAYL+ADW
Sbjct: 1   MANVIPEKVKKLWDEWNLRGSILFSLFLQILLIFCAPTRKRRGNTFVTLIIWSAYLLADW 60

Query: 51  AANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNE 110
            A F VGLI     D      +  + P +  +LLA WA F +LHLGGPD ITAF+LEDNE
Sbjct: 61  VAAFAVGLIANSQNDMK----NKCEMPVQTEDLLALWAPFLLLHLGGPDAITAFSLEDNE 116

Query: 111 LCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFR 170
           L +RHLFG + Q +A  Y+ L +LP ++L+ PT+L+ +AG IKY ER RALYL  +  F+
Sbjct: 117 LWIRHLFGLLIQLIAVGYVILQALP-SELWIPTSLMLLAGIIKYAERTRALYLGCLGNFK 175

Query: 171 DSAL-------------------------------RGEVEHLKRIRSL---------QKK 190
            S L                                G  ++    + L         ++K
Sbjct: 176 ASMLPPADAGPNYAQLMEEYTSKKIAHRLSDLDVVEGGFKYFNIFKGLIVDLMFTFQERK 235

Query: 191 NEK----------ALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFH 240
           + +          A  ++EVELN +Y+ L+TK+ V                         
Sbjct: 236 DSRRYFFARNTEDAFKVLEVELNFMYDALYTKMVVGK----------------------- 272

Query: 241 FQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALR 285
                   + FDV VTY L +GAI LD IA  KL+FSDWT V LR
Sbjct: 273 -------MHPFDVYVTYALLIGAICLDSIAVIKLIFSDWTIVLLR 310

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791187|ref|XP_002863478.1| hypothetical protein ARALYDRAFT_494437 [Arabidopsis lyrata subsp. lyrata] gi|297309313|gb|EFH39737.1| hypothetical protein ARALYDRAFT_494437 [Arabidopsis lyrata subsp. lyrata]

 Score =  197 bits (500), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 99/188 (52%), Positives = 132/188 (70%), Gaps = 20/188 (10%)

Query: 1   MLNPTPESIKKIWDNWNIR----------AVLVLFAPLRKATGNKLIISVIWSAYLIADW 50
           M+N  P+ IK +WD WNIR          A+L+ F+PLRK T  +L+I ++WS+YL+ADW
Sbjct: 1   MVNVIPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADW 60

Query: 51  AANFGVGLITE-RARD-TPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALED 108
           +ANF VGLI++ + +D  P A       P ++ +L+A WA F +LHLGGPDTITAFALED
Sbjct: 61  SANFAVGLISKNQGKDLKPGA-------PPQDKKLMALWAPFLLLHLGGPDTITAFALED 113

Query: 109 NELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEK 168
           N L LRH+FG +FQA+A VY+ L SLP N L+    LVF++GTIKY ER  ALY AS++K
Sbjct: 114 NALWLRHVFGLVFQAIAGVYVVLMSLP-NSLWVIILLVFVSGTIKYLERTTALYSASLDK 172

Query: 169 FRDSALRG 176
           FRDS ++ 
Sbjct: 173 FRDSMIQA 180

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791171|ref|XP_002863470.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297309305|gb|EFH39729.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  197 bits (500), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 176/323 (54%), Gaps = 48/323 (14%)

Query: 6   PESIKKIWDNWNIRAVLVL----------FAPLRKATGNKLIISVIWSAYLIADWAANFG 55
           P  IKKI D WNIR +++L           APLRK T  K +  V+W+AYL+ADW AN+ 
Sbjct: 5   PPKIKKILDIWNIRGLVILSLLFQTSLIFLAPLRKRTSKKWLAVVLWTAYLLADWTANYA 64

Query: 56  VGLITERARDTPTAEYSSKQQPAE---NNELLAFWATFFMLHLGGPDTITAFALEDNELC 112
           V  IT+     P        +P E   N ++LA WA F +LHLGGPDTITA ALEDN L 
Sbjct: 65  VSQITKNQGKEP--------EPGEFPKNKKVLAMWAPFLLLHLGGPDTITALALEDNALW 116

Query: 113 LRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFER--IRALYLASMEKFR 170
            RHLF  + QA+A VY  + S+  N L+ P  L+FI GTIKY ER  I+      +   R
Sbjct: 117 KRHLFSLVSQALACVYAVVQSME-NVLWPPITLLFITGTIKYVERSLIQKGPPKLVRPDR 175

Query: 171 D--------------SALRGEVEHL-----KRIRSLQKKNE----KALGIIEVELNLVYE 207
           D              +  +G V  L     +R  S    NE    +AL IIE EL+ +YE
Sbjct: 176 DLTDLEIVQYGYKFFNTFKGLVVDLVFSSSERDESRDFFNELKPGEALRIIESELDFLYE 235

Query: 208 VLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQ-VEKHGFNEFDVCVTYTLFLGAIAL 266
           ++ TK  + H++   + R I F S++++  VFH + ++   F+  D+ +TYTLF+  IAL
Sbjct: 236 LMFTKNAILHTITGTLFRLIAFGSLISSFFVFHRRPLKSEEFHGADIVITYTLFIVGIAL 295

Query: 267 DIIAFFKLVFSDWTFVALRNDDD 289
           D+++    +FSDWT+  L    D
Sbjct: 296 DLLSIVMFLFSDWTYAVLSKLKD 318

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224147176|ref|XP_002336421.1| predicted protein [Populus trichocarpa] gi|222834970|gb|EEE73419.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (494), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/308 (37%), Positives = 167/308 (54%), Gaps = 26/308 (8%)

Query: 1   MLNPTPESIKKIWDNWNIRAVLVL----------FAPLRKATGNKLIISVIWSAYLIADW 50
           ML   PE +  +W+NW IR +++L          F P RK T    I  ++WSAYL AD 
Sbjct: 3   MLKKLPEEVLNLWNNWEIRGMVLLSLLLQTILIIFGPRRKTTRRSWIRILVWSAYLSADM 62

Query: 51  AANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNE 110
            A   +G +   AR    +   S ++   NN + AFWA F +LHLGGPDTITA+++EDNE
Sbjct: 63  VATVALGNL---ARSQGDSSGDSSEKA--NNSIQAFWAPFLLLHLGGPDTITAYSIEDNE 117

Query: 111 LCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFR 170
           L LRHL G + Q   A Y+F  S P   L F    +F+ G +KY ER   L+ +  +  +
Sbjct: 118 LWLRHLLGLVVQVGVAFYVFSKSWPSGILTFIAIPMFVVGIVKYAERTWVLWSSCSKSLK 177

Query: 171 DSALRG---------EVEHLKRIRSLQKKN--EKALGIIEVELNLVYEVLHTKIQVTHSV 219
           +S++           ++  L R R L  KN  + A  ++E EL L+Y++L+TK  + +S 
Sbjct: 178 NSSISDFSVMQDLVPDISSLIRSRELISKNKADGAFKVVEAELGLIYDMLYTKAPLIYSR 237

Query: 220 LAIILRFICFCSVVAALSVFHFQVEKHGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDW 279
             IILR I     V A   F  +++KH ++  D+ +TY LF  A+ L+  AF  LV SDW
Sbjct: 238 AGIILRCISSLLSVTAFITFQVKIDKHDYSTTDIAITYLLFAAAVFLEFYAFLCLVLSDW 297

Query: 280 TFVALRND 287
           T + L ++
Sbjct: 298 TMIWLTDE 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242414|ref|NP_199361.1| uncharacterized protein [Arabidopsis thaliana] gi|9758738|dbj|BAB09176.1| unnamed protein product [Arabidopsis thaliana] gi|332007874|gb|AED95257.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 97/185 (52%), Positives = 122/185 (65%), Gaps = 16/185 (8%)

Query: 1   MLNPTPESIKKIWDNWNIRAVLVL----------FAPLRKATGNKLIISVIWSAYLIADW 50
           M+N  P+ IK IWD W+IR+ L+           FAP RK +  K+++S IWSAYL+ADW
Sbjct: 1   MVNAIPKPIKDIWDEWSIRSTLIFSLSLQTFLIFFAPQRKRSSRKVLLSFIWSAYLLADW 60

Query: 51  AANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNE 110
           +ANF  G I++   D P        +P ++ EL AFW  F +LHLGGPDTITA ALEDNE
Sbjct: 61  SANFAAGQISDSQGDDPEP-----GEPKKSAELFAFWVPFLLLHLGGPDTITALALEDNE 115

Query: 111 LCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFR 170
           L LRHL G  FQ+VA VY+ L SLP N L+ P  LVF  G IKY ER  ALYLAS++KF+
Sbjct: 116 LWLRHLLGLFFQSVATVYVLLQSLP-NALWKPILLVFATGVIKYVERTLALYLASLDKFK 174

Query: 171 DSALR 175
           DS ++
Sbjct: 175 DSMIQ 179

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
TAIR|locus:2163523	703	AT5G45460 "AT5G45460" [Arabido	0.574	0.240	0.524	8.7e-63
TAIR|locus:2163543	866	AT5G45470 "AT5G45470" [Arabido	0.571	0.193	0.505	1.4e-44
TAIR|locus:2163558	877	AT5G45480 "AT5G45480" [Arabido	0.574	0.192	0.524	3.1e-44
TAIR|locus:2117204	751	AT4G19090 "AT4G19090" [Arabido	0.357	0.139	0.556	6.4e-44
TAIR|locus:2163518	803	AT5G45540 "AT5G45540" [Arabido	0.571	0.209	0.521	7.4e-44
TAIR|locus:2163598	798	AT5G45530 "AT5G45530" [Arabido	0.554	0.204	0.513	7.8e-40

TAIR|locus:2163523 AT5G45460 "AT5G45460" [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 8.7e-63, Sum P(2) = 8.7e-63
 Identities = 98/187 (52%), Positives = 128/187 (68%)

Query:     1 MLNPTPESIKKIWDNWNIR----------AVLVLFAPLRKATGNKLIISVIWSAYLIADW 50
             M++  P+ IK  WD WNIR          A L+ F+PLRK T  + +I VIWS+YL+ADW
Sbjct:     1 MVDVIPKHIKDAWDRWNIRGTIFLSLTLQAFLICFSPLRKRTPRRHLIIVIWSSYLLADW 60

Query:    51 AANFGVGLITE-RARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDN 109
             +ANF VGLI++ + +D           P ++ +L+A WA F +LHLGGPDTITAFALEDN
Sbjct:    61 SANFAVGLISKNQGKDL------KPDDPPQDKKLMALWAPFLLLHLGGPDTITAFALEDN 114

Query:   110 ELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKF 169
              L LR++FG +FQA+A VY+ L SLP N L+    LVFI+GTIKY ER  ALY AS++KF
Sbjct:   115 ALWLRNVFGLVFQAIAGVYVVLQSLP-NSLWVTILLVFISGTIKYLERTTALYSASLDKF 173

Query:   170 RDSALRG 176
             RDS ++G
Sbjct:   174 RDSMIQG 180

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163543 AT5G45470 "AT5G45470" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 1.4e-44, P = 1.4e-44
 Identities = 94/186 (50%), Positives = 129/186 (69%)

Query:     1 MLNPTPESIKKIWDNWNIR----------AVLVLFAPLRKATGNKLIISVIWSAYLIADW 50
             M+   P+ IK +WD WNIR          A+L+ F+PLRK T  +L+I ++WS+YL+ADW
Sbjct:     1 MVEVIPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADW 60

Query:    51 AANFGVGLITE-RARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDN 109
             +ANF VGLI++ + +D           P ++ +++A WA F +LHLGGPDTITAFALEDN
Sbjct:    61 SANFAVGLISKNQGKDL------KPDDPPQDKKVMALWAPFLLLHLGGPDTITAFALEDN 114

Query:   110 ELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKF 169
              L LRH+FG +FQA+A VY+ + SLP N L+    LVF++GTIKY ER  ALY AS++KF
Sbjct:   115 ALWLRHVFGLVFQAIAGVYVVVMSLP-NSLWVVIVLVFVSGTIKYLERTTALYSASLDKF 173

Query:   170 RDSALR 175
             RDS ++
Sbjct:   174 RDSMIQ 179

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2163558 AT5G45480 "AT5G45480" [Arabidopsis thaliana (taxid:3702)]

 Score = 474 (171.9 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 97/185 (52%), Positives = 122/185 (65%)

Query:     1 MLNPTPESIKKIWDNWNIRAVLVL----------FAPLRKATGNKLIISVIWSAYLIADW 50
             M+N  P+ IK IWD W+IR+ L+           FAP RK +  K+++S IWSAYL+ADW
Sbjct:     1 MVNAIPKPIKDIWDEWSIRSTLIFSLSLQTFLIFFAPQRKRSSRKVLLSFIWSAYLLADW 60

Query:    51 AANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNE 110
             +ANF  G I++   D P        +P ++ EL AFW  F +LHLGGPDTITA ALEDNE
Sbjct:    61 SANFAAGQISDSQGDDP-----EPGEPKKSAELFAFWVPFLLLHLGGPDTITALALEDNE 115

Query:   111 LCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFR 170
             L LRHL G  FQ+VA VY+ L SLP N L+ P  LVF  G IKY ER  ALYLAS++KF+
Sbjct:   116 LWLRHLLGLFFQSVATVYVLLQSLP-NALWKPILLVFATGVIKYVERTLALYLASLDKFK 174

Query:   171 DSALR 175
             DS ++
Sbjct:   175 DSMIQ 179

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2117204 AT4G19090 "AT4G19090" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.4e-44, Sum P(2) = 6.4e-44
 Identities = 59/106 (55%), Positives = 74/106 (69%)

Query:    70 EYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFIFQAVAAVYI 129
             +Y     P +N +L+A WA F +LHLGGPDTITAF+LEDN L  RH  G +FQA+A VY+
Sbjct:    69 KYLKPDDPPQNKKLVALWAPFLLLHLGGPDTITAFSLEDNALWNRHFLGLVFQALAGVYV 128

Query:   130 FLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALR 175
              + SLP N L     L+FIAGT KY ER  ALYLAS +K+R+S L+
Sbjct:   129 VVQSLP-NVLSVIILLLFIAGTSKYLERTIALYLASSDKYRNSMLQ 173

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163518 AT5G45540 "AT5G45540" [Arabidopsis thaliana (taxid:3702)]

 Score = 469 (170.2 bits), Expect = 7.4e-44, P = 7.4e-44
 Identities = 96/184 (52%), Positives = 127/184 (69%)

Query:     1 MLNPTPESIKKIWDNWNIRAVLVL----------FAPLRKATGNKLIISVIWSAYLIADW 50
             M +  P  ++K+WD WNIR V++L          FAP R+ T  KL + +IWSAYL+ADW
Sbjct:     1 MTDMIPPHLRKLWDKWNIRGVIILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADW 60

Query:    51 AANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNE 110
             AA++ VG I++   +   AE S+K  P++N ELLAFW+ F +LHLGGPDTITA ALEDNE
Sbjct:    61 AADYAVGQISDSQEEE--AE-SNK--PSKNRELLAFWSPFLLLHLGGPDTITALALEDNE 115

Query:   111 LCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFR 170
             L  RHLF  + QAVA VY+ L S+P N+L  PT ++F+ G IKY ER  AL+ AS++KF+
Sbjct:   116 LWDRHLFSLVCQAVATVYVILLSIP-NRLLTPTLIMFVGGVIKYVERTAALFSASLDKFK 174

Query:   171 DSAL 174
             DS L
Sbjct:   175 DSML 178

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163598 AT5G45530 "AT5G45530" [Arabidopsis thaliana (taxid:3702)]

 Score = 432 (157.1 bits), Expect = 7.8e-40, P = 7.8e-40
 Identities = 93/181 (51%), Positives = 121/181 (66%)

Query:     6 PESIKKIWDNWNIRAVLV---LF-------APLRKATGNKLIISVIWSAYLIADWAANFG 55
             P +IKKI D WNIR +++   LF       AP+RK T  KL+ +V+W+AYL+ADW AN+ 
Sbjct:     5 PPAIKKILDKWNIRGLVIMSLLFQTSLIFLAPMRKRTSKKLLAAVLWTAYLLADWTANYA 64

Query:    56 VGLITE-RARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNELCLR 114
             V  IT+ + ++T   +      P +N +LLA WA F +LHLGGPDTITA ALEDN L  R
Sbjct:    65 VSQITKNQGKETEPGD------PPKNKKLLALWAPFLLLHLGGPDTITALALEDNALWQR 118

Query:   115 HLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSAL 174
             HLFG + QA+A VY  + SL  N L+ P  L+FI GTIKY ER RALY AS++KF+D  L
Sbjct:   119 HLFGLVSQALAGVYAVVQSLE-NVLWPPITLLFITGTIKYVERTRALYSASLDKFKDRML 177

Query:   175 R 175
             +
Sbjct:   178 Q 178

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027580001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (634 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	294
pfam13968	362	pfam13968, DUF4220, Domain of unknown function (DU	8e-44
pfam13968	362	pfam13968, DUF4220, Domain of unknown function (DU	7e-25

>gnl|CDD|222480 pfam13968, DUF4220, Domain of unknown function (DUF4220)

 Score =  152 bits (386), Expect = 8e-44
 Identities = 64/134 (47%), Positives = 80/134 (59%), Gaps = 12/134 (8%)

Query: 41  IWSAYLIADWAANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDT 100
           +W AYL+AD  A + +GL+            S        ++L+AFWA F +LHLGGPDT
Sbjct: 1   LWLAYLLADSIATYALGLL------------SLSSGDPARHQLVAFWAPFLLLHLGGPDT 48

Query: 101 ITAFALEDNELCLRHLFGFIFQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRA 160
           ITA++LEDNEL LRHL G + Q   A+Y+   S PG  L  P  L+F+ G IKY ERI A
Sbjct: 49  ITAYSLEDNELWLRHLLGLLVQVFLALYVLYKSWPGQPLLVPAVLMFVVGVIKYGERIWA 108

Query: 161 LYLASMEKFRDSAL 174
           L  ASME  R S L
Sbjct: 109 LRSASMESIRSSML 122

This family is found in plants and is often associated with DUF294, pfam04578. Length = 362

>gnl|CDD|222480 pfam13968, DUF4220, Domain of unknown function (DUF4220)

 Score =  102 bits (255), Expect = 7e-25
 Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 1/112 (0%)

Query: 175 RGEVEHLKRIRSLQKKNEKALGIIEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVA 234
             +    +        +E+A  ++E+EL+ +Y++L+TK  V H+    +LRFI   S VA
Sbjct: 205 EQDRRKSQEFFRRLSDHERAFKVVEIELSFMYDILYTKAPVIHTWGGYVLRFISLLSTVA 264

Query: 235 ALSVFHFQVEK-HGFNEFDVCVTYTLFLGAIALDIIAFFKLVFSDWTFVALR 285
           AL +F   V+  H ++  DV +TY L +GA+ L+I +  +LVFSDWT VAL 
Sbjct: 265 ALLLFWLAVKDRHDYSRVDVVITYVLLVGALILEIYSLLRLVFSDWTKVALS 316

This family is found in plants and is often associated with DUF294, pfam04578. Length = 362

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
PF13968	362	DUF4220: Domain of unknown function (DUF4220)	100.0

>PF13968 DUF4220: Domain of unknown function (DUF4220)

Probab=100.00  E-value=2.8e-67  Score=503.05  Aligned_cols=235  Identities=42%  Similarity=0.732  Sum_probs=212.8

Q ss_pred             HHHHHhhhhhHHHHHhhhhhcccCCCCcccccCCCCCCCcchhhhHHHHHHHHHhcCCCcceeeccccccccchhhhhhh
Q 041828           41 IWSAYLIADWAANFGVGLITERARDTPTAEYSSKQQPAENNELLAFWATFFMLHLGGPDTITAFALEDNELCLRHLFGFI  120 (294)
Q Consensus        41 lWlAY~~ad~~a~yaLG~l~~~~~~~~~~~~~~~~~~~~~~~L~~~WApfLLlhLGg~DtITAysleDn~lw~R~~l~l~  120 (294)
                      +|+||+++|++|+|+||+||+++             +|.+++|++|||||||+||||||||||||+||||+|+||+++++
T Consensus         1 lWlay~~sd~~a~Y~LG~l~~~~-------------~~~~~~l~~~WAp~LLlhlgg~d~itaysleDn~lw~R~ll~ll   67 (362)
T PF13968_consen    1 LWLAYLLSDSLATYALGLLQSSS-------------SPFKSQLFPFWAPFLLLHLGGQDTITAYSLEDNELWLRHLLTLL   67 (362)
T ss_pred             CchHHhhhHHHHHHHHHHHhcCC-------------CCCCcchhhhHHHHHHHHhCCCcceeeeecccchHHHHHHHHHH
Confidence            69999999999999999999875             25789999999999999999999999999999999999999999


Q ss_pred             eeeeeeeEEEEeeCCCCcchhHHHHHHHHHHHhhhhHHHHHHHhchhhhhhcccc-------------C-----------
Q 041828          121 FQAVAAVYIFLTSLPGNKLFFPTALVFIAGTIKYFERIRALYLASMEKFRDSALR-------------G-----------  176 (294)
Q Consensus       121 ~Qv~~a~yv~~~s~~~~~l~~~~~lmfv~GiiKy~er~~aL~~as~~~~~~sm~~-------------g-----------  176 (294)
                      +|+++++||++++|+|+.+..|+++||++|++||+||+|||++||.+.+++||.+             |           
T Consensus        68 ~qv~~a~Yv~~~~~~g~~l~~~~~lLfv~gi~K~~eR~~AL~~As~~~i~~s~~~~~~~~~~~~~~m~~~~~~~~~~~~~  147 (362)
T PF13968_consen   68 VQVIWALYVFYKSWSGSRLLAPAILLFVVGIIKYGERIWALRRASSRSIRSSMMGEPDPGPNYAETMEGYKYLVEEEYPK  147 (362)
T ss_pred             HHhhhhheeeeeecccchHHHHHHHHHHHHHHHHHHHHHHHHccchhhhHHhhhhhhcccccchhhccccchhccccccc
Confidence            9999999999999988889999999999999999999999999999998888764             1           


Q ss_pred             cc-----------------c------c-------cccccccc-----------------cc------------hHHHHHH
Q 041828          177 EV-----------------E------H-------LKRIRSLQ-----------------KK------------NEKALGI  197 (294)
Q Consensus       177 eI-----------------~------~-------~~l~lsf~-----------------~r------------~~~af~v  197 (294)
                      ++                 +      +       .++|+||+                 +|            +|+||||
T Consensus       148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~k~l~ls~aLf~llrr~f~d~~~~~~~~~~~~~~~~~l~~~~~af~v  227 (362)
T PF13968_consen  148 EIRILKEEDLETLVTVDKVWESLLDSREESDPELKDLCLSFALFKLLRRRFVDFPLSESGRLKTRDFFRGLDDAERAFRV  227 (362)
T ss_pred             eeeeccccccccCCccceecccccchhcccccHHHHHHHHHHHHHHHHhhhhCCCcchhhhHHHHHHHhccccHHHHHHH
Confidence            00                 0      0       12666652                 11            6999999


Q ss_pred             HHHHHHHHHHhhhcCccccccchhHHHHHHHHHHHHHHHHHhhhhcc-CCCCCccchhHHHHHHHHHHHHHHHHHHHHHc
Q 041828          198 IEVELNLVYEVLHTKIQVTHSVLAIILRFICFCSVVAALSVFHFQVE-KHGFNEFDVCVTYTLFLGAIALDIIAFFKLVF  276 (294)
Q Consensus       198 ie~ELsf~yD~lYTK~~v~~t~~g~~lr~~s~~~~~~A~~lF~~~~~-k~~~~~~Dv~ITyvLL~gai~LE~~s~~~~l~  276 (294)
                      +|+||+|+||++|||++++|++.|+++|+++++++++|+++|...++ +++|+++|++|||+|++|++++|+++++.+++
T Consensus       228 ie~ELsf~yD~~YTk~~v~~~~~~~~~~~~s~~~~~~a~~lf~~~~~~~~~~~~~Dv~ITy~Ll~~~~~lE~~~~~~~~~  307 (362)
T PF13968_consen  228 IEMELSFLYDYLYTKAPVVHTWLGLFLRVISLLSTVAALVLFWLSHKKKHGYSRVDVIITYVLLVGAVLLEVWSLLVYLF  307 (362)
T ss_pred             HHHHHHHHHHheeccceeeeeccchHHHHHHHHHHHHHHHHhhccccccccCCccCeehHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999987532 47899999999999999999999999999999


Q ss_pred             hHhHHHhhhcCC
Q 041828          277 SDWTFVALRNDD  288 (294)
Q Consensus       277 S~Wt~~~l~~~~  288 (294)
                      ||||+++|..+.
T Consensus       308 S~W~~v~l~~~~  319 (362)
T PF13968_consen  308 SDWTKVSLLCRY  319 (362)
T ss_pred             CccHHHHhhhcc
Confidence            999999887764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00