Citrus Sinensis ID: 042009

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260--
FFKKQKQEKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKKDN
cccHHHHHHccccccEEEEEccccccccccccccccEEEccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHccccHHccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHcccccccccHHHHHHHHHHcccEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEccc
cHHHHHHHcccccccEEEEEccccccccccccccEEEEEcHHHHHHHHcccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccccHHHccccccccccccHHHHHHHHHHcccEEEEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccc
ffkkqkqekgigfgrcyisgvagsfydrlfpdkslhfvhsssslhwlsqvppalesnatpaalnkgkiyisksspqcvlDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLmgrrsidptteesCYQWELLAQALMSLVTERLIEEekldsfnapyyapcpeELKMAIQKEGSFIIDRlghfeidwdggveeltnttllplsrgqrVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKKDN
ffkkqkqekgigfgrcYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEELTnttllplsrgqrvAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKKDN
FFKKQKQEKGIGFGRCYISGVAGSFYDRLFPDKslhfvhsssslhwlsQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKKDN
*********GIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVP*********AALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISII****
F*************RCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKK**
********KGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKKDN
FFKKQKQEKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGV***TNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKK**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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FFKKQKQEKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIKKDN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query262 2.2.26 [Sep-21-2011]
Q9SBK6392 Jasmonate O-methyltransfe N/A no 0.977 0.653 0.542 3e-71
Q9AR07389 Jasmonate O-methyltransfe yes no 0.931 0.627 0.574 4e-70
Q9SPV4359 Salicylate O-methyltransf N/A no 0.885 0.646 0.476 3e-62
Q9FZN8369 Caffeine synthase 1 OS=Ca N/A no 0.912 0.647 0.443 9e-53
Q9FYZ9364 Benzoate carboxyl methylt N/A no 0.919 0.662 0.420 2e-52
Q68CM3365 Probable caffeine synthas N/A no 0.900 0.646 0.461 2e-51
Q8H0D2384 3,7-dimethylxanthine N-me N/A no 0.973 0.664 0.380 1e-42
Q9AVK0372 7-methylxanthosine syntha N/A no 0.927 0.653 0.393 2e-42
Q9AVJ9378 Monomethylxanthine methyl N/A no 0.973 0.674 0.389 3e-42
A4GE69372 7-methylxanthosine syntha N/A no 0.927 0.653 0.393 3e-42
>sp|Q9SBK6|JMT_BRARP Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis GN=JMT PE=1 SV=1 Back     alignment and function desciption
 Score =  268 bits (685), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/273 (54%), Positives = 192/273 (70%), Gaps = 17/273 (6%)

Query: 3   KKQKQEKGIGF-----GRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESN 57
           K+    + +GF     G C++S V GSFY RLFP +SLHFVHSSSSLHWLSQVP   E N
Sbjct: 119 KRDNNYESLGFEHGSGGPCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCG-EVN 177

Query: 58  ATPAAL------NKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSL 111
                +      N+GKIY+SK+SP+     Y+LQFQ +F +FL+SR+ E+V GGRMVLS 
Sbjct: 178 KKDGVVITADLDNRGKIYLSKTSPKSAHKVYALQFQTDFSVFLRSRSEELVPGGRMVLSF 237

Query: 112 MGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKE 171
           +GR S DPTTEESCYQWELLAQALMSL  E +IEEE +D+FNAPYYA  PEELKMAI+KE
Sbjct: 238 LGRSSPDPTTEESCYQWELLAQALMSLAKEGIIEEENIDAFNAPYYAASPEELKMAIEKE 297

Query: 172 GSFIIDRLGHFEIDWDGGVEELTNTTLL-----PLSRGQRVAKTVRAVVESMFELHFGKA 226
           GSF IDRL    +DW+GG     +  ++      L+ G+RVAKT+RAVVE M E  FG+ 
Sbjct: 298 GSFSIDRLEISPVDWEGGSISDDSYDIVRFKPEALASGRRVAKTIRAVVEPMLEPTFGQK 357

Query: 227 MMDLLFARYAEMVDDYLSKNRAKYINLVISIIK 259
           +MD LF RYA++V +Y+  +  +Y  +++S+++
Sbjct: 358 VMDELFERYAKLVGEYVYVSSPRYTIVIVSLLR 390
Catalyzes the methylation of jasmonate into methyljasmonate, a plant volatile that acts as an important cellular regulator mediating diverse developmental processes and defense responses.
Brassica rapa subsp. pekinensis (taxid: 51351)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 4EC: 1
>sp|Q9AR07|JMT_ARATH Jasmonate O-methyltransferase OS=Arabidopsis thaliana GN=JMT PE=1 SV=3 Back     alignment and function description
>sp|Q9SPV4|SAMT_CLABR Salicylate O-methyltransferase OS=Clarkia breweri GN=SAMT PE=1 SV=1 Back     alignment and function description
>sp|Q9FZN8|TCS1_CAMSI Caffeine synthase 1 OS=Camellia sinensis GN=TCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FYZ9|BAMT_ANTMA Benzoate carboxyl methyltransferase OS=Antirrhinum majus GN=BAMT PE=1 SV=1 Back     alignment and function description
>sp|Q68CM3|TCS2_CAMSI Probable caffeine synthase 2 OS=Camellia sinensis GN=TCS2 PE=2 SV=1 Back     alignment and function description
>sp|Q8H0D2|DXMT1_COFAR 3,7-dimethylxanthine N-methyltransferase OS=Coffea arabica GN=DXMT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9AVK0|XMT1_COFAR 7-methylxanthosine synthase 1 OS=Coffea arabica GN=XMT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9AVJ9|MXMT1_COFAR Monomethylxanthine methyltransferase 1 OS=Coffea arabica GN=MXMT1 PE=1 SV=1 Back     alignment and function description
>sp|A4GE69|XMT1_COFCA 7-methylxanthosine synthase 1 OS=Coffea canephora GN=XMT1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query262
356552031 381 PREDICTED: jasmonate O-methyltransferase 0.988 0.679 0.670 5e-94
356562365 374 PREDICTED: jasmonate O-methyltransferase 0.988 0.692 0.679 2e-93
255538718 372 Jasmonate O-methyltransferase, putative 0.988 0.696 0.681 8e-93
225458205 375 PREDICTED: jasmonate O-methyltransferase 0.992 0.693 0.675 7e-92
225458203 375 PREDICTED: jasmonate O-methyltransferase 0.992 0.693 0.675 2e-91
224085700 369 predicted protein [Populus trichocarpa] 0.980 0.696 0.671 6e-84
147772114 426 hypothetical protein VITISV_040163 [Viti 0.988 0.607 0.631 2e-82
225458207 378 PREDICTED: jasmonate O-methyltransferase 0.984 0.682 0.631 2e-82
358348466 408 Jasmonate O-methyltransferase [Medicago 0.980 0.629 0.627 8e-82
449460239 375 PREDICTED: jasmonate O-methyltransferase 0.988 0.690 0.603 7e-75
>gi|356552031|ref|XP_003544375.1| PREDICTED: jasmonate O-methyltransferase-like [Glycine max] Back     alignment and taxonomy information
 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 175/261 (67%), Positives = 220/261 (84%), Gaps = 2/261 (0%)

Query: 1   FFKKQKQEKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATP 60
           F++KQKQEKG GFG C++S V G+FY RLFP KSLHFVHSSSSLHWLSQVP  LE + + 
Sbjct: 121 FYRKQKQEKGSGFGPCFVSAVPGTFYGRLFPSKSLHFVHSSSSLHWLSQVPGGLE-DGSG 179

Query: 61  AALNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPT 120
            ALNK KIY+SKSSP+CVLDAYS QF+N+F +FL SR+ E+VAGGRMVLSLMGR ++DPT
Sbjct: 180 RALNKQKIYLSKSSPKCVLDAYSRQFKNDFSVFLASRSQEIVAGGRMVLSLMGRETMDPT 239

Query: 121 TEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLG 180
           T+ SCYQWELLA++LM++V+E L+EEEK+DSF+APYYAPC EE+KM IQKEGSFI+D   
Sbjct: 240 TDHSCYQWELLARSLMTMVSEGLLEEEKVDSFDAPYYAPCLEEMKMEIQKEGSFIVDEHE 299

Query: 181 HFEIDWDGGVEELTNT-TLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMV 239
            +EIDWD G++  +++ T+ PL+ G+RVA+T+RAVVESM E HFG  +MD LF RYAE+V
Sbjct: 300 AYEIDWDAGMKLQSDSPTVTPLTSGERVARTIRAVVESMLEPHFGCHIMDELFRRYAEVV 359

Query: 240 DDYLSKNRAKYINLVISIIKK 260
           +D+LSK R  YINLVIS++K+
Sbjct: 360 EDHLSKTRTTYINLVISLVKQ 380

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356562365|ref|XP_003549442.1| PREDICTED: jasmonate O-methyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|255538718|ref|XP_002510424.1| Jasmonate O-methyltransferase, putative [Ricinus communis] gi|223551125|gb|EEF52611.1| Jasmonate O-methyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225458205|ref|XP_002281588.1| PREDICTED: jasmonate O-methyltransferase [Vitis vinifera] gi|302142531|emb|CBI19734.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225458203|ref|XP_002281579.1| PREDICTED: jasmonate O-methyltransferase [Vitis vinifera] gi|302142533|emb|CBI19736.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224085700|ref|XP_002307671.1| predicted protein [Populus trichocarpa] gi|222857120|gb|EEE94667.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147772114|emb|CAN64559.1| hypothetical protein VITISV_040163 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225458207|ref|XP_002281566.1| PREDICTED: jasmonate O-methyltransferase [Vitis vinifera] gi|302142530|emb|CBI19733.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|358348466|ref|XP_003638267.1| Jasmonate O-methyltransferase [Medicago truncatula] gi|355504202|gb|AES85405.1| Jasmonate O-methyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449460239|ref|XP_004147853.1| PREDICTED: jasmonate O-methyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query262
TAIR|locus:2013149389 JMT "jasmonic acid carboxyl me 0.988 0.665 0.505 3.3e-63
TAIR|locus:2115400371 AT4G36470 [Arabidopsis thalian 0.904 0.638 0.401 1.4e-39
TAIR|locus:2154845354 AT5G66430 [Arabidopsis thalian 0.946 0.700 0.387 1.8e-39
TAIR|locus:2179969385 AT5G04380 "AT5G04380" [Arabido 0.912 0.620 0.387 7.8e-39
TAIR|locus:2080747379 BSMT1 [Arabidopsis thaliana (t 0.885 0.612 0.390 2.1e-38
TAIR|locus:2179929415 NAMT1 [Arabidopsis thaliana (t 0.889 0.561 0.371 9.2e-36
TAIR|locus:2144466368 AT5G38020 [Arabidopsis thalian 0.896 0.638 0.337 5.8e-34
TAIR|locus:2095572368 AT3G21950 [Arabidopsis thalian 0.916 0.652 0.335 1.2e-33
TAIR|locus:2053458359 AT2G14060 [Arabidopsis thalian 0.900 0.657 0.346 2.3e-32
TAIR|locus:2161680386 IAMT1 "AT5G55250" [Arabidopsis 0.809 0.549 0.331 3.6e-25
TAIR|locus:2013149 JMT "jasmonic acid carboxyl methyltransferase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 139/275 (50%), Positives = 182/275 (66%)

Query:     1 FFKKQKQEK-GIGFGR-----CYISGVAGSFYDRLFPDKXXXXXXXXXXXXXXXQVP--- 51
             F+ +    K G+GFGR     C++S V GSFY RLFP +               QVP   
Sbjct:   113 FYDRVNNNKEGLGFGRGGGESCFVSAVPGSFYGRLFPRRSLHFVHSSSSLHWLSQVPCRE 172

Query:    52 PALESNATPAAL-NKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLS 110
                E     A L N GKIYISK+SP+    AY+LQFQ +F +FL+SR+ E+V GGRMVLS
Sbjct:   173 AEKEDRTITADLENMGKIYISKTSPKSAHKAYALQFQTDFWVFLRSRSEELVPGGRMVLS 232

Query:   111 LMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQK 170
              +GRRS+DPTTEESCYQWELLAQALMS+  E +IEEEK+D+FNAPYYA   EELKM I+K
Sbjct:   233 FLGRRSLDPTTEESCYQWELLAQALMSMAKEGIIEEEKIDAFNAPYYAASSEELKMVIEK 292

Query:   171 EGSFIIDRLGHFEIDWDGG-VEELTNTTLL---P--LSRGQRVAKTVRAVVESMFELHFG 224
             EGSF IDRL    IDW+GG + E +   ++   P  L+ G+RV+ T+RAVVE M E  FG
Sbjct:   293 EGSFSIDRLEISPIDWEGGSISEESYDLVIRSKPEALASGRRVSNTIRAVVEPMLEPTFG 352

Query:   225 KAMMDLLFARYAEMVDDYLSKNRAKYINLVISIIK 259
             + +MD LF RYA++V +Y   +  +Y  +++S+++
Sbjct:   353 ENVMDELFERYAKIVGEYFYVSSPRYAIVILSLVR 387
GO:0005634 "nucleus" evidence=ISM
GO:0008168 "methyltransferase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=NAS
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0009694 "jasmonic acid metabolic process" evidence=IDA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA;IDA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;IMP
GO:0030795 "jasmonate O-methyltransferase activity" evidence=IMP;IDA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0007165 "signal transduction" evidence=RCA
GO:0009414 "response to water deprivation" evidence=RCA
GO:0009620 "response to fungus" evidence=RCA
GO:0009723 "response to ethylene stimulus" evidence=RCA
GO:0009733 "response to auxin stimulus" evidence=RCA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0042538 "hyperosmotic salinity response" evidence=RCA
TAIR|locus:2115400 AT4G36470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154845 AT5G66430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179969 AT5G04380 "AT5G04380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080747 BSMT1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179929 NAMT1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144466 AT5G38020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095572 AT3G21950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053458 AT2G14060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161680 IAMT1 "AT5G55250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9AR07JMT_ARATH2, ., 1, ., 1, ., 1, 4, 10.57480.93120.6272yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
pfam03492331 pfam03492, Methyltransf_7, SAM dependent carboxyl 1e-111
PLN02668386 PLN02668, PLN02668, indole-3-acetate carboxyl meth 6e-44
>gnl|CDD|217591 pfam03492, Methyltransf_7, SAM dependent carboxyl methyltransferase Back     alignment and domain information 
 Score =  323 bits (830), Expect = e-111
 Identities = 134/261 (51%), Positives = 170/261 (65%), Gaps = 15/261 (5%)

Query: 8   EKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGK 67
                    ++SGV GSFY RLFP  SLHFVHSS SLHWLSQVP  LE   +PA  NKG 
Sbjct: 78  PFQKKKRSYFVSGVPGSFYGRLFPRNSLHFVHSSYSLHWLSQVPKGLEDKESPA-WNKGN 136

Query: 68  IYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQ 127
           IYIS +SP+ V  AY  QF+ +F +FL++RA E+V+GG MVL+ +GR S+DP+  E    
Sbjct: 137 IYISGASPEEVYKAYLDQFKKDFSLFLRARAEELVSGGLMVLTFLGRPSVDPSETECGIF 196

Query: 128 WELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRL-----GHF 182
           W+LL  AL  LV+E LIEEEKLDSFN P YAP PEE+K  I+KEGSF I+RL      + 
Sbjct: 197 WDLLGDALNDLVSEGLIEEEKLDSFNIPIYAPSPEEVKEIIEKEGSFTIERLEIIKHPNG 256

Query: 183 EIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDY 242
           E+ WD    E        +  G+ VA +VRAVVE M   HFG+ +MD LF RYA+ + ++
Sbjct: 257 EVPWDESDSE------DKVEDGRFVASSVRAVVEPMLVAHFGEDIMDKLFDRYAKKLSEH 310

Query: 243 LSK---NRAKYINLVISIIKK 260
           LSK   N  K IN+V+S+ +K
Sbjct: 311 LSKELQNAKKTINVVVSLSRK 331

This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine. Caffeine is synthesised through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyzes the second step to produce theobromine. Length = 331
>gnl|CDD|178273 PLN02668, PLN02668, indole-3-acetate carboxyl methyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 262
PF03492334 Methyltransf_7: SAM dependent carboxyl methyltrans 100.0
PLN02668386 indole-3-acetate carboxyl methyltransferase 100.0
PRK14103255 trans-aconitate 2-methyltransferase; Provisional 97.93
PRK01683258 trans-aconitate 2-methyltransferase; Provisional 97.82
TIGR02072240 BioC biotin biosynthesis protein BioC. This enzyme 96.56
PLN02233261 ubiquinone biosynthesis methyltransferase 96.45
PLN02336475 phosphoethanolamine N-methyltransferase 96.42
TIGR02752231 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me 96.41
PRK08317241 hypothetical protein; Provisional 96.3
TIGR00740239 methyltransferase, putative. A simple BLAST search 96.2
PTZ00098263 phosphoethanolamine N-methyltransferase; Provision 96.11
PF13489161 Methyltransf_23: Methyltransferase domain; PDB: 3J 95.97
COG2226238 UbiE Methylase involved in ubiquinone/menaquinone 95.95
PLN02232160 ubiquinone biosynthesis methyltransferase 95.86
PRK15068322 tRNA mo(5)U34 methyltransferase; Provisional 95.81
PRK11036255 putative S-adenosyl-L-methionine-dependent methylt 95.77
PLN02244340 tocopherol O-methyltransferase 95.57
PRK10258251 biotin biosynthesis protein BioC; Provisional 95.55
PF0824195 Methyltransf_11: Methyltransferase domain; InterPr 95.42
TIGR00452314 methyltransferase, putative. Known examples to dat 95.32
PRK00216239 ubiE ubiquinone/menaquinone biosynthesis methyltra 95.25
TIGR01934223 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis 94.88
PF01209233 Ubie_methyltran: ubiE/COQ5 methyltransferase famil 94.57
KOG2940325 consensus Predicted methyltransferase [General fun 94.03
KOG1540296 consensus Ubiquinone biosynthesis methyltransferas 93.29
PLN02396322 hexaprenyldihydroxybenzoate methyltransferase 93.0
PRK15451247 tRNA cmo(5)U34 methyltransferase; Provisional 92.54
KOG3010261 consensus Methyltransferase [General function pred 91.98
PLN02490340 MPBQ/MSBQ methyltransferase 91.68
smart00828224 PKS_MT Methyltransferase in polyketide synthase (P 91.38
COG4106257 Tam Trans-aconitate methyltransferase [General fun 91.34
PRK11207197 tellurite resistance protein TehB; Provisional 91.17
TIGR02081194 metW methionine biosynthesis protein MetW. This pr 90.03
TIGR00477195 tehB tellurite resistance protein TehB. Part of a 90.0
PRK06922677 hypothetical protein; Provisional 89.88
PRK11705383 cyclopropane fatty acyl phospholipid synthase; Pro 89.76
PF02353273 CMAS: Mycolic acid cyclopropane synthetase; InterP 88.61
PRK12335287 tellurite resistance protein TehB; Provisional 87.82
PRK06202232 hypothetical protein; Provisional 86.41
COG2230283 Cfa Cyclopropane fatty acid synthase and related m 84.63
PLN02336 475 phosphoethanolamine N-methyltransferase 82.59
PF03141506 Methyltransf_29: Putative S-adenosyl-L-methionine- 80.87
>PF03492 Methyltransf_7: SAM dependent carboxyl methyltransferase; InterPro: IPR005299 This family of plant methyltransferases contains enzymes that act on a variety of substrates including salicylic acid, jasmonic acid and 7-Methylxanthine Back     alignment and domain information 
Probab=100.00  E-value=2.1e-78  Score=563.44  Aligned_cols=246  Identities=49%  Similarity=0.831  Sum_probs=209.0

Q ss_pred             CCceEEeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHHHH
Q 042009           13 FGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNFLI   92 (262)
Q Consensus        13 ~~~~f~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~   92 (262)
                      .++||++|||||||+||||++||||+||++||||||++|+++.+++ |++||||+||++++++++|.+||++||++||.+
T Consensus        86 ~~~~f~~gvpgSFy~rLfP~~Svh~~~Ss~alHWLS~vP~~l~~~~-~~~~Nkg~i~~~~~~~~~v~~ay~~Qf~~D~~~  164 (334)
T PF03492_consen   86 FRNYFVSGVPGSFYGRLFPSNSVHFGHSSYALHWLSQVPEELVDKS-SPAWNKGNIYISRTSPPEVAKAYAKQFQKDFSS  164 (334)
T ss_dssp             TTSEEEEEEES-TTS--S-TT-EEEEEEES-TTB-SSS-CCCCTTT-STTTSTTTSSSSTTS-HHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCchhhhccCCCCceEEEEEechhhhcccCCccccccc-ccccccCcEEEecCCCHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999999977 599999999999999999999999999999999


Q ss_pred             HHHHHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhcCC
Q 042009           93 FLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEG  172 (262)
Q Consensus        93 FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~~g  172 (262)
                      ||++||+||+|||+|||+++||++.++...+.+.+|++|+++|+|||.||+|++||+|+||+|+|+||++||+++|+++|
T Consensus       165 FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~~l~dMv~eGlI~~ek~dsfniP~Y~ps~eEv~~~I~~~g  244 (334)
T PF03492_consen  165 FLKARAEELVPGGRMVLTFLGRDEEDPSSTGSCMLWDLLADALRDMVAEGLISEEKVDSFNIPIYFPSPEEVRAIIEEEG  244 (334)
T ss_dssp             HHHHHHHHEEEEEEEEEEEEE-STSSTTSTTCCCHHHHHHHHHHHHHHTTSS-HCCCCTG--SBB---HHHHHHHHHHHT
T ss_pred             HHHHhhheeccCcEEEEEEeeccccccccCCcchHHHHHHHHHHHHHHcCCcCHHHhhceeCCccCCCHHHHHHHHhcCC
Confidence            99999999999999999999999977766666789999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEeEeecCCCCcccccccccccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC---Cc
Q 042009          173 SFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNR---AK  249 (262)
Q Consensus       173 sF~I~~le~~~~~w~~~~~~~~~d~~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~~v~~~~~~~~---~~  249 (262)
                      +|+|+++|+++.+|...+...... .+...+|+.+++++|||+||+|++|||++|||+||+||+++++++++.+.   ++
T Consensus       245 sF~I~~le~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~iRA~~e~~l~~hfG~ei~D~LF~r~~~~v~~~~~~~~~~~~~  323 (334)
T PF03492_consen  245 SFEIEKLELFEQPWWSVPDDESWK-EDAKEYARNVANYIRAVFEPLLKAHFGEEIMDELFERYAKKVAEHLEKEKSRNMK  323 (334)
T ss_dssp             SEEEEEEEEEEEETCCTCTTT-ST-TTHHCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTHTT-BE
T ss_pred             CEEEEEEEEEeecccccchhhhcc-cchhhhHHHHHHhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence            999999999997754433211100 12367999999999999999999999999999999999999999998765   88


Q ss_pred             eEEEEEEEEec
Q 042009          250 YINLVISIIKK  260 (262)
Q Consensus       250 ~~~~~v~L~r~  260 (262)
                      +++++++|+||
T Consensus       324 ~~~i~~~L~Rk  334 (334)
T PF03492_consen  324 FVNIVVSLTRK  334 (334)
T ss_dssp             EEEEEEEEEE-
T ss_pred             cEEEEEEEeeC
Confidence            99999999997

Caffeine is synthesized through sequential three-step methylation of xanthine derivatives at positions 7-N, 3-N, and 1-N. The protein 7-methylxanthine methyltransferase (designated as CaMXMT) catalyses the second step to produce theobromine [].; GO: 0008168 methyltransferase activity; PDB: 2EFJ_A 1M6E_X 2EG5_C 3B5I_B.
>PLN02668 indole-3-acetate carboxyl methyltransferase Back     alignment and domain information
>PRK14103 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PRK01683 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>TIGR02072 BioC biotin biosynthesis protein BioC Back     alignment and domain information
>PLN02233 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase Back     alignment and domain information
>PRK08317 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00740 methyltransferase, putative Back     alignment and domain information
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional Back     alignment and domain information
>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C Back     alignment and domain information
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PLN02232 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PLN02244 tocopherol O-methyltransferase Back     alignment and domain information
>PRK10258 biotin biosynthesis protein BioC; Provisional Back     alignment and domain information
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>TIGR00452 methyltransferase, putative Back     alignment and domain information
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed Back     alignment and domain information
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases Back     alignment and domain information
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] Back     alignment and domain information
>KOG2940 consensus Predicted methyltransferase [General function prediction only] Back     alignment and domain information
>KOG1540 consensus Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism] Back     alignment and domain information
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase Back     alignment and domain information
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>KOG3010 consensus Methyltransferase [General function prediction only] Back     alignment and domain information
>PLN02490 MPBQ/MSBQ methyltransferase Back     alignment and domain information
>smart00828 PKS_MT Methyltransferase in polyketide synthase (PKS) enzymes Back     alignment and domain information
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only] Back     alignment and domain information
>PRK11207 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>TIGR02081 metW methionine biosynthesis protein MetW Back     alignment and domain information
>TIGR00477 tehB tellurite resistance protein TehB Back     alignment and domain information
>PRK06922 hypothetical protein; Provisional Back     alignment and domain information
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional Back     alignment and domain information
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) Back     alignment and domain information
>PRK12335 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>PRK06202 hypothetical protein; Provisional Back     alignment and domain information
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
1m6e_X359 Crystal Structure Of Salicylic Acid Carboxyl Methyl 4e-54
2eg5_A372 The Structure Of Xanthosine Methyltransferase Lengt 3e-35
2efj_A384 The Structure Of 1,7 Dimethylxanthine Methyltransfe 3e-33
3b5i_A374 Crystal Structure Of Indole-3-Acetic Acid Methyltra 2e-26
>pdb|1M6E|X Chain X, Crystal Structure Of Salicylic Acid Carboxyl Methyltransferase (Samt) Length = 359 Back     alignment and structure 
Iteration: 1

 Score =  207 bits (528), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 112/258 (43%), Positives = 155/258 (60%), Gaps = 26/258 (10%)
Query: 14  GRCYISGVAGSFYDRLFPDKXXXXXXXXXXXXXXXQVPPALESNATPAALNKGKIYISKS 73
           G C+I+GV GSFY RLFP                 QVP  +ESN       KG IY++ +
Sbjct: 119 GVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESN-------KGNIYMANT 171
Query: 74  SPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQ 133
            PQ VL+AY  QFQ +  +FL+ RA E+V GGRMVL+++GRRS D  + E C  W+LLA 
Sbjct: 172 CPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAM 231
Query: 134 ALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDW------- 186
           AL  +V+E LIEEEK+D FN P Y P P E++  I KEGSF+ID +   EI W       
Sbjct: 232 ALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDG 291
Query: 187 DGG--VEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLS 244
           DGG  VEE           G  VA+ +RAV E +   HFG+A+++ +F RY  ++ + +S
Sbjct: 292 DGGGSVEE----------EGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMS 341
Query: 245 KNRAKYINLVISIIKKDN 262
           K + K+IN+++S+I+K +
Sbjct: 342 KEKTKFINVIVSLIRKSD 359
>pdb|2EG5|A Chain A, The Structure Of Xanthosine Methyltransferase Length = 372 Back     alignment and structure
>pdb|2EFJ|A Chain A, The Structure Of 1,7 Dimethylxanthine Methyltransferase Length = 384 Back     alignment and structure
>pdb|3B5I|A Chain A, Crystal Structure Of Indole-3-Acetic Acid Methyltransferase Length = 374 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query262
2efj_A384 3,7-dimethylxanthine methyltransferase; SAM-depend 9e-83
1m6e_X359 S-adenosyl-L-methionnine:salicylic acid carboxyl m 1e-82
3b5i_A374 S-adenosyl-L-methionine:salicylic acid carboxyl me 7e-77
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Length = 384 Back     alignment and structure
 Score =  252 bits (643), Expect = 9e-83
 Identities = 96/266 (36%), Positives = 142/266 (53%), Gaps = 13/266 (4%)

Query: 3   KKQKQEKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAA 62
           +  ++E G   G C I  + GSFY RLFP++S+HF+HS   LHWLSQVP  L +    + 
Sbjct: 118 RNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISV 177

Query: 63  LNKGKIYISKSSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTE 122
            NKG IY SK+S   +  AY  QF  +F  FL+  + E+++ GRM+L+ + +        
Sbjct: 178 -NKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDH-- 234

Query: 123 ESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHF 182
                 +LL  ++  LV E  +EEEKLDSFN P YAP  EE+K  +++EGSF I  L  F
Sbjct: 235 --PNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETF 292

Query: 183 EIDWDGGVEE--------LTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFAR 234
              +D G            +  +    +R   VA  VR++ E +   HFG+A++  L  R
Sbjct: 293 NAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHR 352

Query: 235 YAEMVDDYLSKNRAKYINLVISIIKK 260
            A+     L   +  Y +++IS+ KK
Sbjct: 353 IAKNAAKVLRSGKGFYDSVIISLAKK 378
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Length = 359 Back     alignment and structure
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Length = 374 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query262
2efj_A384 3,7-dimethylxanthine methyltransferase; SAM-depend 100.0
1m6e_X359 S-adenosyl-L-methionnine:salicylic acid carboxyl m 100.0
3b5i_A374 S-adenosyl-L-methionine:salicylic acid carboxyl me 100.0
3ccf_A279 Cyclopropane-fatty-acyl-phospholipid synthase; YP_ 98.31
2p35_A259 Trans-aconitate 2-methyltransferase; SAM dependent 98.05
2yqz_A263 Hypothetical protein TTHA0223; RNA methyltransfera 97.89
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 97.59
3dtn_A234 Putative methyltransferase MM_2633; structural gen 97.33
3hnr_A220 Probable methyltransferase BT9727_4108; structural 97.33
3hem_A302 Cyclopropane-fatty-acyl-phospholipid synthase 2; p 97.3
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 97.27
3sm3_A235 SAM-dependent methyltransferases; NESG, structural 97.25
3f4k_A257 Putative methyltransferase; structural genomics, P 97.23
2ld4_A176 Anamorsin; methyltransferase-like fold, alpha/beta 97.17
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 97.11
3mgg_A276 Methyltransferase; NYSGXRC, PSI-II, protein struct 96.88
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 96.86
1vl5_A260 Unknown conserved protein BH2331; putative methylt 96.68
3dli_A240 Methyltransferase; PSI-II, NYSGXRC, structural gen 96.68
4htf_A285 S-adenosylmethionine-dependent methyltransferase; 96.58
1kpg_A287 CFA synthase;, cyclopropane-fatty-acyl-phospholipi 96.56
2g72_A289 Phenylethanolamine N-methyltransferase; HET: SAM F 96.5
2aot_A292 HMT, histamine N-methyltransferase; classic methyl 96.48
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 96.47
3l8d_A242 Methyltransferase; structural genomics, PSI, nysgr 96.3
2p7i_A250 Hypothetical protein; putative methyltransferase, 96.29
3cc8_A230 Putative methyltransferase; structural genomics, j 96.29
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 96.25
2fk8_A318 Methoxy mycolic acid synthase 4; S-adenosylmethion 96.18
3lcc_A235 Putative methyl chloride transferase; halide methy 96.11
1xxl_A239 YCGJ protein; structural genomics, protein structu 96.1
1vlm_A219 SAM-dependent methyltransferase; possible histamin 96.0
2a14_A263 Indolethylamine N-methyltransferase; SGC,INMT, str 95.92
3bgv_A313 MRNA CAP guanine-N7 methyltransferase; alternative 95.7
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 95.68
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 95.63
3giw_A277 Protein of unknown function DUF574; rossmann-fold 95.61
3dh0_A219 SAM dependent methyltransferase; cystal structure, 95.57
4hg2_A257 Methyltransferase type 11; structural genomics, PS 95.54
3g5l_A253 Putative S-adenosylmethionine dependent methyltran 95.53
3e8s_A227 Putative SAM dependent methyltransferase; NP_74470 95.23
3ocj_A305 Putative exported protein; structural genomics, PS 95.21
1ri5_A298 MRNA capping enzyme; methyltransferase, M7G, messe 95.18
3bkx_A275 SAM-dependent methyltransferase; YP_807781.1, cycl 95.11
3vc1_A312 Geranyl diphosphate 2-C-methyltransferase; rossman 95.02
4gek_A261 TRNA (CMO5U34)-methyltransferase; structural genom 94.93
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 94.85
2qe6_A274 Uncharacterized protein TFU_2867; putative methylt 94.83
3i53_A332 O-methyltransferase; CO-complex, rossmann-like fol 94.52
2i62_A265 Nicotinamide N-methyltransferase; structural genom 94.44
3dlc_A219 Putative S-adenosyl-L-methionine-dependent methylt 94.43
2ex4_A241 Adrenal gland protein AD-003; methyltransferase, s 94.31
1pjz_A203 Thiopurine S-methyltransferase; polymorphism, S-ad 94.15
3lst_A348 CALO1 methyltransferase; calicheamicin, enediyne, 94.14
2gs9_A211 Hypothetical protein TT1324; methyl transferase, s 94.08
3ege_A261 Putative methyltransferase from antibiotic biosyn 94.04
3bkw_A243 MLL3908 protein, S-adenosylmethionine dependent me 94.01
3g5t_A299 Trans-aconitate 3-methyltransferase; structural ge 93.94
3reo_A368 (ISO)eugenol O-methyltransferase; directed evoluti 93.9
3p9c_A364 Caffeic acid O-methyltransferase; S-adenosylmethio 93.82
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 93.82
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 93.7
2gb4_A252 Thiopurine S-methyltransferase; 18204406, thiopuri 93.69
3i9f_A170 Putative type 11 methyltransferase; structural gen 93.66
2zfu_A215 Nucleomethylin, cerebral protein 1; nucleolar prot 93.59
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 93.59
4e2x_A416 TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s 93.45
3pfg_A263 N-methyltransferase; N,N-dimethyltransferase, SAM 93.2
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 92.95
3dp7_A363 SAM-dependent methyltransferase; structural genomi 92.74
3g2m_A299 PCZA361.24; SAM-dependent methyltransferase, glyco 92.52
4a6d_A353 Hydroxyindole O-methyltransferase; melatonin, circ 92.49
2ip2_A334 Probable phenazine-specific methyltransferase; pyo 92.13
2xvm_A199 Tellurite resistance protein TEHB; antibiotic resi 92.09
4fsd_A383 Arsenic methyltransferase; rossmann fold; 1.75A {C 91.75
2r3s_A335 Uncharacterized protein; methyltransferase domain, 91.5
1x19_A359 CRTF-related protein; methyltransferase, bacterioc 90.58
3thr_A293 Glycine N-methyltransferase; GNMT, folate, methylt 90.25
1tw3_A360 COMT, carminomycin 4-O-methyltransferase; anthracy 90.13
2p8j_A209 S-adenosylmethionine-dependent methyltransferase; 89.2
3m70_A286 Tellurite resistance protein TEHB homolog; structu 88.78
1fp1_D372 Isoliquiritigenin 2'-O-methyltransferase; protein- 88.73
3ggd_A245 SAM-dependent methyltransferase; YP_325210.1, stru 88.48
3ofk_A216 Nodulation protein S; NODS, N-methyltransferase, S 88.28
2kw5_A202 SLR1183 protein; structural genomics, northeast st 88.26
2vdw_A302 Vaccinia virus capping enzyme D1 subunit; nucleoti 87.06
3q87_B170 N6 adenine specific DNA methylase; SAM-methyltrans 86.94
1zg3_A358 Isoflavanone 4'-O-methyltransferase; rossman fold, 86.25
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 84.11
4df3_A233 Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; 83.35
1yzh_A214 TRNA (guanine-N(7)-)-methyltransferase; alpha-beta 83.2
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 81.67
3gu3_A284 Methyltransferase; alpha-beta protein, structural 81.13
1ej0_A180 FTSJ; methyltransferase, adoMet, adenosyl methioni 80.81
2pxx_A215 Uncharacterized protein MGC2408; structural genomi 80.26
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A* Back     alignment and structure
Probab=100.00  E-value=2.4e-71  Score=522.73  Aligned_cols=252  Identities=38%  Similarity=0.652  Sum_probs=223.9

Q ss_pred             chhhhhhcCCCCceEEeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHH
Q 042009            3 KKQKQEKGIGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAY   82 (262)
Q Consensus         3 ~~~~~~~~~~~~~~f~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay   82 (262)
                      +++.+++|+..++||++|||||||+||||++|+|++||++||||||++|+.+.++. |++||||+||++.++|+.|.+||
T Consensus       118 ~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~-s~~~nkg~i~i~~~sp~~v~~ay  196 (384)
T 2efj_A          118 RNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTEL-GISVNKGCIYSSKASRPPIQKAY  196 (384)
T ss_dssp             HHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC-------CCCCTTCSSSCTTSCHHHHHHH
T ss_pred             hhhhhhccCCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccc-cccccCCceEecCCCCHHHHHHH
Confidence            44556667767899999999999999999999999999999999999999999876 69999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCceEEEEecccCCC--CCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCC
Q 042009           83 SLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSI--DPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPC  160 (262)
Q Consensus        83 ~~Q~~~D~~~FL~~Ra~EL~~GG~mvl~~~g~~~~--~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps  160 (262)
                      ++||++||.+||++|++||+|||+||++++|+++.  ++.++      ++|.++|++||.||+|+++++|+||+|+|+||
T Consensus       197 ~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~------~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps  270 (384)
T 2efj_A          197 LDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSM------DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPS  270 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHH------HHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccH------HHHHHHHHHHHHhCCcchhhhcccCCcccCCC
Confidence            99999999999999999999999999999999987  66543      38999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCceEEEEEEeEeecCCCC---ccccc--cccc---ccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHH
Q 042009          161 PEELKMAIQKEGSFIIDRLGHFEIDWDGG---VEELT--NTTL---LPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLF  232 (262)
Q Consensus       161 ~~Ev~~~ie~~gsF~I~~le~~~~~w~~~---~~~~~--~d~~---~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF  232 (262)
                      ++|++++|+++|+|+|+++|+++.+|+++   +++++  .+..   +....|+.+|+++||++||+|.+|||++|||+||
T Consensus       271 ~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF  350 (384)
T 2efj_A          271 TEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLS  350 (384)
T ss_dssp             HHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHH
T ss_pred             HHHHHHHHHHcCCceEEEEEEEeecccccccccccccccccccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHH
Confidence            99999999999999999999999999987   44210  1100   1246899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCceEEEEEEEEecC
Q 042009          233 ARYAEMVDDYLSKNRAKYINLVISIIKKD  261 (262)
Q Consensus       233 ~r~~~~v~~~~~~~~~~~~~~~v~L~r~~  261 (262)
                      +||+++++++++.+++++++++++|+||.
T Consensus       351 ~ry~~~~~~~~~~~~~~~~~~~~~L~k~~  379 (384)
T 2efj_A          351 HRIAKNAAKVLRSGKGFYDSVIISLAKKP  379 (384)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEEEEEECC
T ss_pred             HHHHHHHHHHHhhCCCceEEEEEEEEEcc
Confidence            99999999999999999999999999985
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35 Back     alignment and structure
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana} Back     alignment and structure
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} Back     alignment and structure
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Back     alignment and structure
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Back     alignment and structure
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Back     alignment and structure
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Back     alignment and structure
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 Back     alignment and structure
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} Back     alignment and structure
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} Back     alignment and structure
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* Back     alignment and structure
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ... Back     alignment and structure
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Back     alignment and structure
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} Back     alignment and structure
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A Back     alignment and structure
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus} Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Back     alignment and structure
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* Back     alignment and structure
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* Back     alignment and structure
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 Back     alignment and structure
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Back     alignment and structure
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* Back     alignment and structure
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} Back     alignment and structure
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans} Back     alignment and structure
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Back     alignment and structure
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Back     alignment and structure
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A* Back     alignment and structure
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} Back     alignment and structure
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* Back     alignment and structure
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Back     alignment and structure
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} Back     alignment and structure
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* Back     alignment and structure
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A* Back     alignment and structure
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} Back     alignment and structure
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42 Back     alignment and structure
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 Back     alignment and structure
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} Back     alignment and structure
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus} Back     alignment and structure
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Back     alignment and structure
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} Back     alignment and structure
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* Back     alignment and structure
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* Back     alignment and structure
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* Back     alignment and structure
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A* Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Back     alignment and structure
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* Back     alignment and structure
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* Back     alignment and structure
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Back     alignment and structure
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* Back     alignment and structure
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Back     alignment and structure
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* Back     alignment and structure
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* Back     alignment and structure
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* Back     alignment and structure
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} Back     alignment and structure
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A* Back     alignment and structure
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* Back     alignment and structure
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A Back     alignment and structure
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} Back     alignment and structure
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} Back     alignment and structure
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A* Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Back     alignment and structure
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} Back     alignment and structure
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53 Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Back     alignment and structure
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A Back     alignment and structure
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* Back     alignment and structure
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 262
d1m6ex_359 c.66.1.35 (X:) Salicylic acid carboxyl methyltrans 1e-93
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Length = 359 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Salicylic acid carboxyl methyltransferase (SAMT)
domain: Salicylic acid carboxyl methyltransferase (SAMT)
species: Clarkia breweri [TaxId: 36903]

 Score =  277 bits (711), Expect = 1e-93
 Identities = 117/250 (46%), Positives = 165/250 (66%), Gaps = 8/250 (3%)

Query: 13  FGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISK 72
            G C+I+GV GSFY RLFP  +LHF+HSS SL WLSQVP  +ESN       KG IY++ 
Sbjct: 118 DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESN-------KGNIYMAN 170

Query: 73  SSPQCVLDAYSLQFQNNFLIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLA 132
           + PQ VL+AY  QFQ +  +FL+ RA E+V GGRMVL+++GRRS D  + E C  W+LLA
Sbjct: 171 TCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLA 230

Query: 133 QALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQKEGSFIIDRLGHFEIDWDGGVEE 192
            AL  +V+E LIEEEK+D FN P Y P P E++  I KEGSF+ID +   EI W    ++
Sbjct: 231 MALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKD 290

Query: 193 LTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKYIN 252
             +        G  VA+ +RAV E +   HFG+A+++ +F RY  ++ + +SK + K+IN
Sbjct: 291 -GDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKFIN 349

Query: 253 LVISIIKKDN 262
           +++S+I+K +
Sbjct: 350 VIVSLIRKSD 359

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query262
d1m6ex_359 Salicylic acid carboxyl methyltransferase (SAMT) { 100.0
d2a14a1257 Indolethylamine N-methyltransferase, INMT {Human ( 97.75
d2g72a1263 Phenylethanolamine N-methyltransferase, PNMTase {H 97.38
d1vl5a_231 Hypothetical protein BH2331 {Bacillus halodurans [ 97.24
d1vlma_208 Possible histamine N-methyltransferase TM1293 {The 96.94
d1xxla_234 Hypothetical protein YcgJ {Bacillus subtilis [TaxI 96.9
d1im8a_225 Hypothetical protein HI0319 (YecO) {Haemophilus in 96.33
d1tw3a2253 Carminomycin 4-O-methyltransferase {Streptomyces p 96.22
d2o57a1282 Putative sarcosine dimethylglycine methyltransfera 96.01
d1nkva_245 Hypothetical Protein YjhP {Escherichia coli [TaxId 95.89
d1xtpa_254 Hypothetical protein Lmaj004091aaa (LmjF30.0810) { 95.81
d2ex4a1222 Adrenal gland protein AD-003 (C9orf32) {Human (Hom 95.42
d1kpga_285 CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} 95.35
d2fk8a1280 Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri 95.35
d1ve3a1226 Hypothetical protein PH0226 {Archaeon Pyrococcus h 95.23
d1jqea_280 Histamine methyltransferase {Human (Homo sapiens) 94.97
d1kpia_291 CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} 94.96
d2p7ia1225 Hypothetical protein ECA1738 {Erwinia carotovora [ 94.92
d1qzza2256 Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu 94.89
d2bzga1229 Thiopurine S-methyltransferase {Human (Homo sapien 91.94
d1pjza_201 Thiopurine S-methyltransferase {Pseudomonas syring 91.4
d1ri5a_252 mRNA cap (Guanine N-7) methyltransferase {Fungus ( 91.15
d1p91a_268 rRNA methyltransferase RlmA {Escherichia coli [Tax 90.21
d1fp1d2244 Chalcone O-methyltransferase {Alfalfa (Medicago sa 89.96
d2i6ga1198 Putative methyltransferase TehB {Salmonella typhim 88.99
d2avna1246 Hypothetical methyltransferase TM1389 {Thermotoga 86.52
d1wzna1251 Hypothetical methyltransferase PH1305 {Archaeon Py 84.72
d1fp2a2244 Isoflavone O-methyltransferase {Alfalfa (Medicago 84.47
d2gh1a1281 Methyltransferase BC2162 {Bacillus cereus [TaxId: 83.15
d1y8ca_246 Putative methyltransferase CAC2371 {Clostridium ac 82.03
>d1m6ex_ c.66.1.35 (X:) Salicylic acid carboxyl methyltransferase (SAMT) {Clarkia breweri [TaxId: 36903]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Salicylic acid carboxyl methyltransferase (SAMT)
domain: Salicylic acid carboxyl methyltransferase (SAMT)
species: Clarkia breweri [TaxId: 36903]

Probab=100.00  E-value=2.5e-80  Score=576.40  Aligned_cols=244  Identities=48%  Similarity=0.832  Sum_probs=230.3

Q ss_pred             CCCCceEEeeccCccccccCCCCccceEEcccccccccCCCccccCCCCccccCCCceeecCCCcHHHHHHHHHHHHHHH
Q 042009           11 IGFGRCYISGVAGSFYDRLFPDKSLHFVHSSSSLHWLSQVPPALESNATPAALNKGKIYISKSSPQCVLDAYSLQFQNNF   90 (262)
Q Consensus        11 ~~~~~~f~~~vpgSFY~rlfP~~Svh~~~Ss~alHWLS~~P~~~~~~~~s~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~   90 (262)
                      +..++||++|||||||+||||++||||+||+||||||||+|+++.+       |||+||+.++++++|.+||++||++||
T Consensus       116 ~~~~~~f~~gvpGSFY~rLfP~~Slh~~~Ss~alHWLS~vP~~l~~-------n~~~i~~~~~~~~~v~~ay~~Qf~~D~  188 (359)
T d1m6ex_         116 DVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIES-------NKGNIYMANTCPQSVLNAYYKQFQEDH  188 (359)
T ss_dssp             SCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCC-------CTTTTSSCSSSCCTTSCCSHHHHHHHH
T ss_pred             cCCCCeEEEecCCchhhhcCCCCceEEeeehhhhhhhhcCCccccC-------CCCcEEEcCCCCHHHHHHHHHHHHHHH
Confidence            3466899999999999999999999999999999999999999876       899999999999999999999999999


Q ss_pred             HHHHHHHHHhhccCceEEEEecccCCCCCCCchhhHHHHHHHHHHHHHHHhccCChhhhcccccCcccCCHHHHHHHHhc
Q 042009           91 LIFLKSRAAEMVAGGRMVLSLMGRRSIDPTTEESCYQWELLAQALMSLVTERLIEEEKLDSFNAPYYAPCPEELKMAIQK  170 (262)
Q Consensus        91 ~~FL~~Ra~EL~~GG~mvl~~~g~~~~~~~~~~~~~~~~~l~~al~dmv~eGli~~e~~dsfn~P~y~ps~~Ev~~~ie~  170 (262)
                      .+||++||+||+|||+|||+++||++.++.+++.+.+|++|+++|+|||.||+|++||+|+||+|+|+||++||+++|++
T Consensus       189 ~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~dmv~eGlI~eek~dsfn~P~Y~ps~eEv~~~ie~  268 (359)
T d1m6ex_         189 ALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILK  268 (359)
T ss_dssp             HHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcEEEEEEeccCCCCCCCCccchHHHHHHHHHHHHHHcCCCCHHHHHhccCccccCCHHHHHHHhcc
Confidence            99999999999999999999999999988877777899999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEEEeEeecCCCCcccccccccccchhHHHHHhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCce
Q 042009          171 EGSFIIDRLGHFEIDWDGGVEELTNTTLLPLSRGQRVAKTVRAVVESMFELHFGKAMMDLLFARYAEMVDDYLSKNRAKY  250 (262)
Q Consensus       171 ~gsF~I~~le~~~~~w~~~~~~~~~d~~~~~~~a~~~a~~~RA~~ep~l~~hfge~I~delF~r~~~~v~~~~~~~~~~~  250 (262)
                      +|+|+|+++|+++.+|+++.++.+.. .++..+|+.+++++|||+||+|++|||++|||+||+||+++++++++++++++
T Consensus       269 ~gsF~i~~~e~~~~~~~~~~~~~~~~-~d~~~~~~~~a~~~RA~~e~~l~~hfg~~i~D~lF~r~~~~v~~~~~~~~~~~  347 (359)
T d1m6ex_         269 EGSFLIDHIEASEIYWSSCTKDGDGG-GSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIERMSKEKTKF  347 (359)
T ss_dssp             TTTBCCEEEEEEEEETTCCSSCTTCC-SSTTTTTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCeeeeeeEeeeccccccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHhhHhhcCCce
Confidence            99999999999999999987654311 23367899999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEEecCC
Q 042009          251 INLVISIIKKDN  262 (262)
Q Consensus       251 ~~~~v~L~r~~~  262 (262)
                      ++++++|+||.|
T Consensus       348 ~~~~~sL~rK~~  359 (359)
T d1m6ex_         348 INVIVSLIRKSD  359 (359)
T ss_dssp             EEEEEEEEBCCC
T ss_pred             EEEEEEEEecCC
Confidence            999999999986
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} Back     information, alignment and structure
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} Back     information, alignment and structure
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} Back     information, alignment and structure
>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} Back     information, alignment and structure
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure