Citrus Sinensis ID: 042118

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNAPICMSPFS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccccccccEEEEEEEccccccccEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccHHHcccHccccHHHHHHcccHHEEEEHcccccHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHcc
Coil and Loop (DISEMBL)
MMSIISIAADLMQDFKtdyltrssakSVFVSEVLGAAMGCVIGPLTLWLYsnafdirspdgpckapyaviyreiaipgiqgfsefprhyvnpkkisqfipiptgmaipfysgafFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVfrlnapicmspfs
Flexible Loop (DISEMBL)
MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNApicmspfs
Low Complexity Region (SEG)
MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNAPICMSPFS
Disordered region (IsUnstruct)
***IISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNAPICM****
Disordered Region (DISOPRED)
**S**SIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNAPICMSPFS
Disordered Region (DISEMBL)
MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNAPICMSPFS
Disordered Region (DISPRO)
**SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNAPICMSPFS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVNPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGAGSEEYAGAVVSGLICGDGIWSIASATLSVFRLNAPICMSPFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
Q6R3K6	676	Probable metal-nicotianam	yes	no	0.975	0.238	0.583	8e-57
Q6R3K8	670	Probable metal-nicotianam	no	no	0.975	0.240	0.552	2e-53
Q7XRV2	678	Probable metal-nicotianam	yes	no	0.975	0.237	0.531	7e-53
Q7XRV1	668	Probable metal-nicotianam	no	no	0.981	0.242	0.497	2e-48
Q5JQD7	717	Probable metal-nicotianam	no	no	1.0	0.230	0.456	2e-42
Q7XKF4	724	Probable metal-nicotianam	no	no	0.987	0.225	0.454	7e-40
Q7X660	712	Probable metal-nicotianam	no	no	1.0	0.231	0.403	8e-40
Q6H7J6	727	Probable metal-nicotianam	no	no	1.0	0.226	0.426	1e-39
Q6H3Z6	674	Metal-nicotianamine trans	no	no	0.969	0.237	0.429	5e-38
Q9SHY2	688	Probable metal-nicotianam	no	no	1.0	0.239	0.421	2e-37

>sp|Q6R3K6|YSL6_ARATH Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2

 Score =  219 bits (557), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 112/192 (58%), Positives = 135/192 (70%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+  AFDI  P+
Sbjct: 477 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVIAPLTFWLFWTAFDIGDPN 536

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI GI+GF+E P+H                    + P KISQFIPI
Sbjct: 537 GPYKAPYAVIFREMAILGIEGFAELPKHCLALCYGFFIAALIVNLLRDITPPKISQFIPI 596

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG              +E++AGAV SGLICGDGIW+I SA 
Sbjct: 597 PMAMAVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDFAGAVASGLICGDGIWTIPSAI 656

Query: 150 LSVFRLNAPICM 161
           LS+ R+N PICM
Sbjct: 657 LSILRINPPICM 668

May be involved in the transport of nicotianamine-chelated metals.
Arabidopsis thaliana (taxid: 3702)

>sp|Q6R3K8|YSL4_ARATH Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1

 Score =  207 bits (528), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/192 (55%), Positives = 132/192 (68%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FV+++LG AMGC+I PLT WL+  AFDI  PD
Sbjct: 474 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVTQLLGTAMGCIIAPLTFWLFWTAFDIGDPD 533

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHYV-------------------NPKKISQFIPI 101
           G  KAPYAVIYRE+AI G++GF++ P+H +                    P KIS+ IP+
Sbjct: 534 GLYKAPYAVIYREMAILGVEGFAKLPKHCLALCCGFFIAALIVNLIRDMTPPKISKLIPL 593

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA PFY GA+FA+D+FVG              +++Y+GAV SGLICGDGIW+I SA 
Sbjct: 594 PMAMAGPFYIGAYFAIDMFVGTVIMLVWERMNKKDADDYSGAVASGLICGDGIWTIPSAI 653

Query: 150 LSVFRLNAPICM 161
           LS+ R+N PICM
Sbjct: 654 LSILRINPPICM 665

May be involved in the transport of nicotianamine-chelated metals.

Arabidopsis thaliana (taxid: 3702)

>sp|Q7XRV2|YSL6_ORYSJ Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1

 Score =  206 bits (523), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 102/192 (53%), Positives = 132/192 (68%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDF+T YLT SS +S+FVS+++G  +GC+I PLT WLY  AFDI +PD
Sbjct: 479 MMSIVSTAADLMQDFRTGYLTLSSPRSMFVSQLIGTTLGCIIAPLTFWLYWTAFDIGNPD 538

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           G  KAPYAVIYRE++I G++GFS  P+H                    V PK +S+FIP+
Sbjct: 539 GMFKAPYAVIYREMSILGVEGFSALPQHCLAICSVFFVAAILINLLRDVTPKSVSKFIPL 598

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG              SE++AGA+ SGLICGDGIWS+ SA 
Sbjct: 599 PMAMAVPFYIGAYFAIDMFVGTVILFVWERVNRKESEDFAGAIASGLICGDGIWSVPSAI 658

Query: 150 LSVFRLNAPICM 161
           LS+ R++ P+CM
Sbjct: 659 LSIMRIDPPMCM 670

May be involved in the transport of nicotianamine-chelated metals.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XRV1|YSL5_ORYSJ Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica GN=YSL5 PE=2 SV=3

 Score =  191 bits (485), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/193 (49%), Positives = 128/193 (66%), Gaps = 31/193 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           +MSI+   ADLMQDFK+ YLT SS +S+F+S+++G A+GC+I PLTLWL+  AFDI  PD
Sbjct: 468 IMSIVCSTADLMQDFKSGYLTLSSPRSMFISQMIGVALGCIIAPLTLWLFWTAFDIGDPD 527

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHYVN-------------------PKKISQFIPI 101
           G  KAP+A+I+RE+AI GI+GF+  PRH +                    P  +S+FIPI
Sbjct: 528 GEYKAPFAIIFREMAIIGIEGFAALPRHCLEICCVFFLAALIINLMKDVVPNHVSRFIPI 587

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+F VD+F+G              +++YA AV SGLICGDG+WSI SA 
Sbjct: 588 PMAMAVPFYIGAYFGVDMFIGTLILFAWQKIDRREADDYAVAVASGLICGDGVWSIPSAV 647

Query: 150 LSVFRLNAPICMS 162
           LS+  ++ PICMS
Sbjct: 648 LSILGVDPPICMS 660

May be involved in the transport of nicotianamine-chelated metals.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2

 Score =  171 bits (434), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/197 (45%), Positives = 122/197 (61%), Gaps = 32/197 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAF-DIRSP 59
           MMSI+S A+DLMQDFKT YLT +S +S+FVS+V+G AMGCVI P   WL+  AF DI   
Sbjct: 508 MMSIVSTASDLMQDFKTGYLTLASPRSMFVSQVIGTAMGCVIAPCVFWLFYKAFADIGVS 567

Query: 60  DGPCKAPYAVIYREIAIPGIQGFSEFPRHYVN-------------------PKKISQFIP 100
                APYA++YR +AI G+ GFS  P+H +                    P K+++FIP
Sbjct: 568 GTEYPAPYAIVYRNMAILGVDGFSSLPKHCLTLCYIFFAAAIAINLARDLAPSKVARFIP 627

Query: 101 IPTGMAIPFYSGAFFAVDIFVG------------AGSEEYAGAVVSGLICGDGIWSIASA 148
           +P  MAIPFY G++FA+D+F+G            A +E +A AV SGLICGDGIW++  +
Sbjct: 628 LPMAMAIPFYIGSYFAIDMFIGTVILFVWEMVNKAKAEAFAPAVASGLICGDGIWTLPQS 687

Query: 149 TLSVFRLNAPICMSPFS 165
            L++ ++  PICM   S
Sbjct: 688 ILALAKVKPPICMKFLS 704

May be involved in the transport of nicotianamine-chelated metals.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XKF4|YSL13_ORYSJ Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2

 Score =  162 bits (411), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 120/198 (60%), Gaps = 35/198 (17%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFD---IR 57
           MM+I+S AADLMQDFKT YLT +S +S+FVS+V+G AMGCVI P   WL+  AFD   I 
Sbjct: 513 MMNIVSTAADLMQDFKTGYLTLASPRSMFVSQVIGTAMGCVIAPCVFWLFYKAFDNIGIS 572

Query: 58  SPDGPCKAPYAVIYREIAIPGIQGFSEFPRHYVN------------------PKKISQFI 99
             D P  AP A ++R IAI G+ GFS  P++ +N                    K+S+FI
Sbjct: 573 GSDYP--APNAAVFRSIAILGVDGFSSLPKNCLNLCYAFFAAAIVVNLIRDLVPKVSRFI 630

Query: 100 PIPTGMAIPFYSGAFFAVDIFVG------------AGSEEYAGAVVSGLICGDGIWSIAS 147
           PIP  MAIPFY G++FA+D+F+G            A ++ Y  AV SG+ICGDGIW +  
Sbjct: 631 PIPMAMAIPFYIGSYFAIDMFIGTVILFVWQRVDRAKADTYGPAVASGMICGDGIWVLPQ 690

Query: 148 ATLSVFRLNAPICMSPFS 165
           + L++ ++  PICM   S
Sbjct: 691 SVLALAKVKPPICMKFLS 708

May be involved in the transport of nicotianamine-chelated metals.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7X660|YSL11_ORYSJ Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1

 Score =  162 bits (410), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 120/196 (61%), Gaps = 31/196 (15%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MM+I+  A+DLMQDFKT Y+T +S +S+FVS+V+G AMGCVI P   WL+  +F+I + D
Sbjct: 504 MMNIVGTASDLMQDFKTGYMTLASPRSMFVSQVIGTAMGCVIAPCVFWLFYKSFNIGASD 563

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHYVN-------------------PKKISQFIPI 101
           G   APY ++YR +AI G+ G S  P++ +                    P++++++IPI
Sbjct: 564 GAYPAPYTIMYRNMAILGVNGLSSLPKYCLTLCYIAFVAAFIINLIKDLVPERVAKYIPI 623

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P   AIPFY G +FA+D+F+G+             ++ +  AV SGL+CGDG+W++  A 
Sbjct: 624 PMAAAIPFYLGPYFAIDMFMGSVILYFWEWRNKDEAQSFGPAVASGLMCGDGLWALPQAV 683

Query: 150 LSVFRLNAPICMSPFS 165
           LS+  +N P+CM   S
Sbjct: 684 LSLVNVNPPLCMKFLS 699

May be involved in the transport of nicotianamine-chelated metals.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6H7J6|YSL14_ORYSJ Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1

 Score =  162 bits (409), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/197 (42%), Positives = 120/197 (60%), Gaps = 32/197 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAF-DIRSP 59
           MMSI+S A+DLMQDFKT YLT +S +S+F+S+V+G  MGCVI P   WL+  AF +I + 
Sbjct: 518 MMSIVSTASDLMQDFKTGYLTLASPRSMFISQVIGTGMGCVIAPCVFWLFYKAFSNIGTS 577

Query: 60  DGPCKAPYAVIYREIAIPGIQGFSEFPRHYVN-------------------PKKISQFIP 100
                APYA++YR +AI G+ GF+  P + +                    P K+S+FIP
Sbjct: 578 GTEYPAPYAIVYRNMAILGVDGFNSLPENCLTLCYIFFAAAIAINLIRDLAPHKVSRFIP 637

Query: 101 IPTGMAIPFYSGAFFAVDIFVG------------AGSEEYAGAVVSGLICGDGIWSIASA 148
           +P  MAIPFY G++FA+D+F+G            A ++ +  AV SGLICGDGIW++  +
Sbjct: 638 LPMAMAIPFYIGSYFAIDMFLGSVILFVWEKLNKAKADAFGPAVASGLICGDGIWTLPQS 697

Query: 149 TLSVFRLNAPICMSPFS 165
            L++ ++  PICM   S
Sbjct: 698 ILALAKVKPPICMKFLS 714

May be involved in the transport of nicotianamine-chelated metals.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6H3Z6|YSL2_ORYSJ Metal-nicotianamine transporter YSL2 OS=Oryza sativa subsp. japonica GN=YSL2 PE=2 SV=2

 Score =  156 bits (395), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 115/191 (60%), Gaps = 31/191 (16%)

Query: 3   SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGP 62
            ++ ++ADLM DFKT +LT +S +S+ V + +G AMGC+I PLT  L+  AFDI +PDG 
Sbjct: 479 QLVQVSADLMHDFKTGHLTLTSPRSMLVGQAIGTAMGCIIAPLTFLLFYKAFDIGNPDGY 538

Query: 63  CKAPYAVIYREIAIPGIQGFSEFPRHYVN-------------------PKKISQFIPIPT 103
            KAPYA+I+R +AI G++GFS  P+H +                    P+K   ++P+PT
Sbjct: 539 WKAPYALIFRNMAILGVEGFSALPKHCLELSAGFFAFSVLINLMRDFLPRKYRDYVPLPT 598

Query: 104 GMAIPFYSGAFFAVDIFVGA---------GSEEYA---GAVVSGLICGDGIWSIASATLS 151
            MA+PF  GA FA+D+ VG+          S+E A    AV SG ICGDGIW   S+ LS
Sbjct: 599 AMAVPFLVGANFAIDMCVGSLIVFAWHKINSKESALLVPAVASGFICGDGIWMFPSSLLS 658

Query: 152 VFRLNAPICMS 162
           + ++  PICM 
Sbjct: 659 LAKVKPPICMK 669

Involved in the phloem transport of iron and manganese and their translocation into the grain. Transports iron- and manganese-nicotianamine chelates, but not iron-phytosiderophore.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1

 Score =  154 bits (389), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 119/197 (60%), Gaps = 32/197 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAF-DIRSP 59
           MM+I+S A+DLMQDFKT Y+T +S +S+F+S+ +G AMGCVI P   WL+  AF D   P
Sbjct: 478 MMNIVSTASDLMQDFKTGYMTLASPRSMFLSQAIGTAMGCVISPCVFWLFYKAFPDFGQP 537

Query: 60  DGPCKAPYAVIYREIAIPGIQGFSEFPRH-------------YVN------PKKISQFIP 100
                APYA++YR ++I G++GFS  P+H              VN        K ++FIP
Sbjct: 538 GTAYPAPYALVYRNMSILGVEGFSALPKHCLMLCYIFFAAAVIVNGIRDALGPKWARFIP 597

Query: 101 IPTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASA 148
           +P  MAIPFY G +F +D+ +G+             ++ Y+ AV SGLICG+GIW++ S+
Sbjct: 598 LPMAMAIPFYLGGYFTIDMCLGSLILFIWRKLNKPKADAYSSAVASGLICGEGIWTLPSS 657

Query: 149 TLSVFRLNAPICMSPFS 165
            L++  + APICM   S
Sbjct: 658 ILALAGVKAPICMKFLS 674

May be involved in the transport of nicotianamine-chelated metals.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
350285879	679	yellow stripe-like protein 6 [Malus xiao	0.975	0.237	0.619	2e-58
359488468	629	PREDICTED: probable metal-nicotianamine	0.975	0.255	0.598	3e-58
359488472	668	PREDICTED: probable metal-nicotianamine	0.975	0.241	0.598	4e-58
359488466	675	PREDICTED: probable metal-nicotianamine	0.975	0.238	0.598	4e-58
359488470	676	PREDICTED: probable metal-nicotianamine	0.975	0.238	0.598	4e-58
359488474	667	PREDICTED: probable metal-nicotianamine	0.975	0.241	0.598	5e-58
224055759	669	oligopeptide transporter OPT family [Pop	0.975	0.240	0.604	3e-57
449460551	676	PREDICTED: probable metal-nicotianamine	0.981	0.239	0.606	7e-57
356571565	674	PREDICTED: probable metal-nicotianamine	0.975	0.238	0.588	2e-55
255642904	327	unknown [Glycine max]	0.975	0.492	0.583	2e-55

>gi|350285879|gb|AEQ28191.1| yellow stripe-like protein 6 [Malus xiaojinensis]

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 119/192 (61%), Positives = 138/192 (71%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+F+S+++G AMGCVI PLT WL+  AFDI SPD
Sbjct: 480 MMSIVSTAADLMQDFKTGYLTMSSAKSMFISQLVGTAMGCVIAPLTFWLFWTAFDIGSPD 539

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI GI+GFSE P+H                    V PKKISQFIPI
Sbjct: 540 GPYKAPYAVIFREMAILGIEGFSELPKHCLAMCVGFFVAALVINLLRDVCPKKISQFIPI 599

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FAVD+FVG              +E+YAGAV SGLICGDGIW+I SA 
Sbjct: 600 PMAMAVPFYIGAYFAVDMFVGTVILFIWERVNRKDAEDYAGAVASGLICGDGIWTIPSAV 659

Query: 150 LSVFRLNAPICM 161
           LS+FR+N PICM
Sbjct: 660 LSIFRVNPPICM 671

Source: Malus xiaojinensis

Species: Malus xiaojinensis

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488468|ref|XP_003633761.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 2 [Vitis vinifera]

 Score =  229 bits (583), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 139/192 (72%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+  AFDI SPD
Sbjct: 430 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWLFWTAFDIGSPD 489

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI G++GFSE P+H                    V P K+SQFIPI
Sbjct: 490 GPYKAPYAVIFREMAILGVEGFSELPKHCLAICCGFFVAALVINLLRDVTPAKVSQFIPI 549

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG             G+E++AGAV SGLICGDGIW+I SA+
Sbjct: 550 PMAMAVPFYIGAYFAIDMFVGTVILFVWERMNRKGAEDFAGAVASGLICGDGIWTIPSAS 609

Query: 150 LSVFRLNAPICM 161
           LS+FR+N P+CM
Sbjct: 610 LSIFRINPPVCM 621

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488472|ref|XP_003633763.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 4 [Vitis vinifera]

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 139/192 (72%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+  AFDI SPD
Sbjct: 469 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWLFWTAFDIGSPD 528

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI G++GFSE P+H                    V P K+SQFIPI
Sbjct: 529 GPYKAPYAVIFREMAILGVEGFSELPKHCLAICCGFFVAALVINLLRDVTPAKVSQFIPI 588

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG             G+E++AGAV SGLICGDGIW+I SA+
Sbjct: 589 PMAMAVPFYIGAYFAIDMFVGTVILFVWERMNRKGAEDFAGAVASGLICGDGIWTIPSAS 648

Query: 150 LSVFRLNAPICM 161
           LS+FR+N P+CM
Sbjct: 649 LSIFRINPPVCM 660

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488466|ref|XP_002274559.2| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 1 [Vitis vinifera] gi|296082320|emb|CBI21325.3| unnamed protein product [Vitis vinifera]

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 139/192 (72%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+  AFDI SPD
Sbjct: 476 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWLFWTAFDIGSPD 535

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI G++GFSE P+H                    V P K+SQFIPI
Sbjct: 536 GPYKAPYAVIFREMAILGVEGFSELPKHCLAICCGFFVAALVINLLRDVTPAKVSQFIPI 595

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG             G+E++AGAV SGLICGDGIW+I SA+
Sbjct: 596 PMAMAVPFYIGAYFAIDMFVGTVILFVWERMNRKGAEDFAGAVASGLICGDGIWTIPSAS 655

Query: 150 LSVFRLNAPICM 161
           LS+FR+N P+CM
Sbjct: 656 LSIFRINPPVCM 667

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488470|ref|XP_003633762.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 3 [Vitis vinifera]

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 139/192 (72%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+  AFDI SPD
Sbjct: 477 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWLFWTAFDIGSPD 536

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI G++GFSE P+H                    V P K+SQFIPI
Sbjct: 537 GPYKAPYAVIFREMAILGVEGFSELPKHCLAICCGFFVAALVINLLRDVTPAKVSQFIPI 596

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG             G+E++AGAV SGLICGDGIW+I SA+
Sbjct: 597 PMAMAVPFYIGAYFAIDMFVGTVILFVWERMNRKGAEDFAGAVASGLICGDGIWTIPSAS 656

Query: 150 LSVFRLNAPICM 161
           LS+FR+N P+CM
Sbjct: 657 LSIFRINPPVCM 668

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488474|ref|XP_003633764.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 5 [Vitis vinifera]

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 139/192 (72%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+  AFDI SPD
Sbjct: 468 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWLFWTAFDIGSPD 527

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI G++GFSE P+H                    V P K+SQFIPI
Sbjct: 528 GPYKAPYAVIFREMAILGVEGFSELPKHCLAICCGFFVAALVINLLRDVTPAKVSQFIPI 587

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG             G+E++AGAV SGLICGDGIW+I SA+
Sbjct: 588 PMAMAVPFYIGAYFAIDMFVGTVILFVWERMNRKGAEDFAGAVASGLICGDGIWTIPSAS 647

Query: 150 LSVFRLNAPICM 161
           LS+FR+N P+CM
Sbjct: 648 LSIFRINPPVCM 659

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055759|ref|XP_002298639.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222845897|gb|EEE83444.1| oligopeptide transporter OPT family [Populus trichocarpa]

 Score =  226 bits (576), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 116/192 (60%), Positives = 137/192 (71%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+ +AFDI  PD
Sbjct: 470 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVIAPLTFWLFWSAFDIGDPD 529

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI GI+GFSE P H                    V PKKISQFIPI
Sbjct: 530 GPYKAPYAVIFREMAILGIEGFSELPEHCLALCCGFFVAALVINLLRDVTPKKISQFIPI 589

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG              +E+Y+GAV SGLICGDGIW+I SA 
Sbjct: 590 PMAMAVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDYSGAVASGLICGDGIWTIPSAI 649

Query: 150 LSVFRLNAPICM 161
           L++FR+N PICM
Sbjct: 650 LAIFRINPPICM 661

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460551|ref|XP_004148009.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like [Cucumis sativus] gi|449501993|ref|XP_004161514.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like [Cucumis sativus]

 Score =  224 bits (572), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 117/193 (60%), Positives = 139/193 (72%), Gaps = 31/193 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+ +AFDI  PD
Sbjct: 478 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVIAPLTFWLFWSAFDIGLPD 537

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRH-------------YVN------PKKISQFIPI 101
            P KAPYAVI+RE+AI G++GFSE P+H              VN      PKKI+QFIPI
Sbjct: 538 SPYKAPYAVIFREMAILGVEGFSELPKHCLAMCCGFFVAAFLVNLLRDVVPKKIAQFIPI 597

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FA+D+FVG              +E+YAGAV SGLICGDGIW+I SA 
Sbjct: 598 PMAMAVPFYIGAYFAIDMFVGTVILFIWERINRKDAEDYAGAVASGLICGDGIWTIPSAV 657

Query: 150 LSVFRLNAPICMS 162
           LS+FR+N PICMS
Sbjct: 658 LSIFRINPPICMS 670

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571565|ref|XP_003553947.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 1 [Glycine max]

 Score =  220 bits (560), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/192 (58%), Positives = 136/192 (70%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI++ AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT W++  AFDI SPD
Sbjct: 475 MMSIVATAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWMFWTAFDIGSPD 534

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI G+QGFSE P++                    V PKK SQ+IPI
Sbjct: 535 GPYKAPYAVIFREMAILGVQGFSELPKYCLEMCGGFFLAALVINLLRDVTPKKFSQYIPI 594

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FAVD+FVG              +E+YAGAV SGLICGDGIW+I SA 
Sbjct: 595 PMAMAVPFYIGAYFAVDMFVGTVILFVWERLNRKDAEDYAGAVASGLICGDGIWTIPSAI 654

Query: 150 LSVFRLNAPICM 161
           LS+ R++ PICM
Sbjct: 655 LSILRIDPPICM 666

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255642904|gb|ACU22673.1| unknown [Glycine max]

 Score =  220 bits (560), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/192 (58%), Positives = 136/192 (70%), Gaps = 31/192 (16%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
           MMSI++ AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT W++  AFD+ SPD
Sbjct: 128 MMSIVATAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWMFWTAFDVGSPD 187

Query: 61  GPCKAPYAVIYREIAIPGIQGFSEFPRHY-------------------VNPKKISQFIPI 101
           GP KAPYAVI+RE+AI G+QGFSE P++                    V PKK SQ+IPI
Sbjct: 188 GPYKAPYAVIFREMAILGVQGFSELPKYCLEMCGGFFAAALAINLLRDVTPKKFSQYIPI 247

Query: 102 PTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASAT 149
           P  MA+PFY GA+FAVD+FVG              +E+YAGAV SGLICGDGIW+I SA 
Sbjct: 248 PMAMAVPFYIGAYFAVDMFVGTVILFVWERLNRKDAEDYAGAVASGLICGDGIWTIPSAI 307

Query: 150 LSVFRLNAPICM 161
           LS+ R++ PICM
Sbjct: 308 LSIMRIDPPICM 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2091970	676	YSL6 "AT3G27020" [Arabidopsis	0.533	0.130	0.715	3.8e-53
TAIR|locus:2163036	670	YSL4 "AT5G41000" [Arabidopsis	0.533	0.131	0.693	5.6e-50
TAIR|locus:2018491	688	YSL7 "AT1G65730" [Arabidopsis	0.533	0.127	0.516	3.6e-36
TAIR|locus:2090502	714	YSL5 "AT3G17650" [Arabidopsis	0.527	0.121	0.522	1.9e-35
TAIR|locus:2134956	673	YSL1 "YELLOW STRIPE like 1" [A	0.521	0.127	0.5	2.4e-35
TAIR|locus:2168656	675	YSL3 "YELLOW STRIPE like 3" [A	0.521	0.127	0.523	4.6e-35
TAIR|locus:2007715	724	YSL8 "AT1G48370" [Arabidopsis	0.527	0.120	0.5	3.8e-34
TAIR|locus:2152896	664	YSL2 "AT5G24380" [Arabidopsis	0.521	0.129	0.523	8.1e-34
TAIR|locus:2163508	216	AT5G45450 "AT5G45450" [Arabido	0.739	0.564	0.413	1.5e-21
DICTYBASE|DDB_G0291554	777	DDB_G0291554 "Putative oligope	0.406	0.086	0.323	1e-05

TAIR|locus:2091970 YSL6 "AT3G27020" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.8e-53, Sum P(2) = 3.8e-53
 Identities = 63/88 (71%), Positives = 75/88 (85%)

Query:     1 MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
             MMSI+S AADLMQDFKT YLT SSAKS+FVS+++G AMGCVI PLT WL+  AFDI  P+
Sbjct:   477 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVIAPLTFWLFWTAFDIGDPN 536

Query:    61 GPCKAPYAVIYREIAIPGIQGFSEFPRH 88
             GP KAPYAVI+RE+AI GI+GF+E P+H
Sbjct:   537 GPYKAPYAVIFREMAILGIEGFAELPKH 564

GO:0006857 "oligopeptide transport" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2163036 YSL4 "AT5G41000" [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 5.6e-50, Sum P(2) = 5.6e-50
 Identities = 61/88 (69%), Positives = 74/88 (84%)

Query:     1 MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
             MMSI+S AADLMQDFKT YLT SSAKS+FV+++LG AMGC+I PLT WL+  AFDI  PD
Sbjct:   474 MMSIVSTAADLMQDFKTGYLTLSSAKSMFVTQLLGTAMGCIIAPLTFWLFWTAFDIGDPD 533

Query:    61 GPCKAPYAVIYREIAIPGIQGFSEFPRH 88
             G  KAPYAVIYRE+AI G++GF++ P+H
Sbjct:   534 GLYKAPYAVIYREMAILGVEGFAKLPKH 561

GO:0006857 "oligopeptide transport" evidence=ISS

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2018491 YSL7 "AT1G65730" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
 Identities = 46/89 (51%), Positives = 64/89 (71%)

Query:     1 MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAF-DIRSP 59
             MM+I+S A+DLMQDFKT Y+T +S +S+F+S+ +G AMGCVI P   WL+  AF D   P
Sbjct:   478 MMNIVSTASDLMQDFKTGYMTLASPRSMFLSQAIGTAMGCVISPCVFWLFYKAFPDFGQP 537

Query:    60 DGPCKAPYAVIYREIAIPGIQGFSEFPRH 88
                  APYA++YR ++I G++GFS  P+H
Sbjct:   538 GTAYPAPYALVYRNMSILGVEGFSALPKH 566

GO:0006857 "oligopeptide transport" evidence=ISS;RCA

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2090502 YSL5 "AT3G17650" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
 Identities = 46/88 (52%), Positives = 62/88 (70%)

Query:     1 MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFD-IRSP 59
             MM+I+S A+DL QDFKT YLT SS KS+FVS+V+G AMGCV+ P   WL+  AFD +  P
Sbjct:   503 MMNIVSTASDLTQDFKTGYLTLSSPKSMFVSQVIGTAMGCVVSPCVFWLFYKAFDDLGLP 562

Query:    60 DGPCKAPYAVIYREIAIPGIQGFSEFPR 87
             +    AP+A +YR +A  G++G +  PR
Sbjct:   563 NTEYPAPFATVYRSMAKLGVEGVASLPR 590

GO:0006857 "oligopeptide transport" evidence=ISS

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2134956 YSL1 "YELLOW STRIPE like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 43/86 (50%), Positives = 65/86 (75%)

Query:     3 SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGP 62
             S++S++  LMQDFKT + T +S K++F S+++G  +GC++ PL+ +L+  AFDI +P+G 
Sbjct:   479 SVVSVSCILMQDFKTAHYTMTSPKAMFASQMIGTVVGCIVTPLSFFLFYKAFDIGNPNGE 538

Query:    63 CKAPYAVIYREIAIPGIQGFSEFPRH 88
              KAPYA+IYR +AI G+QGFS  P H
Sbjct:   539 FKAPYALIYRNMAILGVQGFSALPLH 564

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006857 "oligopeptide transport" evidence=ISS

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0010039 "response to iron ion" evidence=IEP

GO:0003006 "developmental process involved in reproduction" evidence=IGI

GO:0048316 "seed development" evidence=IGI

GO:0051980 "iron-nicotianamine transmembrane transporter activity" evidence=IGI

TAIR|locus:2168656 YSL3 "YELLOW STRIPE like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.6e-35, Sum P(2) = 4.6e-35
 Identities = 45/86 (52%), Positives = 67/86 (77%)

Query:     3 SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGP 62
             SI+SI++DLM DFKT +LT +S +S+ VS+ +G A+GCV+ PLT +L+  AFD+ + +G 
Sbjct:   477 SIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNQEGE 536

Query:    63 CKAPYAVIYREIAIPGIQGFSEFPRH 88
              KAPYA++YR +AI G++GFS  P+H
Sbjct:   537 YKAPYALVYRNMAILGVEGFSALPQH 562

GO:0005737 "cytoplasm" evidence=ISM

GO:0006857 "oligopeptide transport" evidence=ISS

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009624 "response to nematode" evidence=IEP

GO:0003006 "developmental process involved in reproduction" evidence=IGI

GO:0005886 "plasma membrane" evidence=IDA

GO:0048316 "seed development" evidence=IGI

GO:0051980 "iron-nicotianamine transmembrane transporter activity" evidence=IGI

TAIR|locus:2007715 YSL8 "AT1G48370" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
 Identities = 44/88 (50%), Positives = 62/88 (70%)

Query:     1 MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFD-IRSP 59
             MM+I+S A+DL QDFKT YLT SS +++FVS+V+G AMGC++ P   WL+  AFD +  P
Sbjct:   513 MMNIVSTASDLTQDFKTGYLTLSSPRAMFVSQVIGTAMGCLVSPCVFWLFYKAFDDLGLP 572

Query:    60 DGPCKAPYAVIYREIAIPGIQGFSEFPR 87
             +    AP+A +YR +A  G++G S  PR
Sbjct:   573 NSEYPAPFATVYRSMAKLGVEGVSSLPR 600

GO:0006857 "oligopeptide transport" evidence=ISS

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2152896 YSL2 "AT5G24380" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 8.1e-34, Sum P(2) = 8.1e-34
 Identities = 45/86 (52%), Positives = 67/86 (77%)

Query:     3 SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGP 62
             SI+S++ADLM DFKT +LT++S +S+ V++ +G A+GCV+ PLT +L+  AFD+ + +G 
Sbjct:   469 SIVSVSADLMHDFKTGHLTQTSPRSMLVAQAIGTAIGCVVAPLTFFLFYKAFDVGNQNGE 528

Query:    63 CKAPYAVIYREIAIPGIQGFSEFPRH 88
              KAPYA+IYR +AI G+QG S  P+H
Sbjct:   529 YKAPYAMIYRNMAIIGVQGPSALPKH 554

GO:0006857 "oligopeptide transport" evidence=ISS

GO:0015198 "oligopeptide transporter activity" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006826 "iron ion transport" evidence=IDA

GO:0010039 "response to iron ion" evidence=IEP

GO:0010043 "response to zinc ion" evidence=IEP

TAIR|locus:2163508 AT5G45450 "AT5G45450" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 57/138 (41%), Positives = 83/138 (60%)

Query:     1 MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFD-IRSP 59
             MM+I+S A+DL QDFKT YLT SS KS+FVS+V+G AMGCV+ P   WL+  AFD +  P
Sbjct:    11 MMNIVSRASDLTQDFKTGYLTLSSPKSMFVSQVIGTAMGCVVSPCVFWLFYKAFDDLGLP 70

Query:    60 DGPCKAPYAVIYREIA---IP-----------GIQGFSEFPRHYVNPKKISQFIPIPTGM 105
             +     P+A +YR +A   +P           G+       +  ++  K  +FIP+   M
Sbjct:    71 NTEYHTPFATVYRSMAKLGVPRECLVLCYVFFGVAILVNIVKDSLH-SKWGRFIPLSMAM 129

Query:   106 AIPFYSGAFFAVDIFVGA 123
             AIPF+ G +FA+++ VG+
Sbjct:   130 AIPFFLGLYFAIEMCVGS 147

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0055085 "transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0291554 DDB_G0291554 "Putative oligopeptide transporter YGL114W" [Dictyostelium discoideum (taxid:44689)]

 Score = 103 (41.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
 Identities = 22/68 (32%), Positives = 39/68 (57%)

Query:     8 AADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPY 67
             A D++QD KT +L ++S +  F  +++G+    +       LYS+A+ I S DG  +AP 
Sbjct:   599 AGDMIQDLKTGHLIKASPRVQFYGQLIGSFFSIIFAVAAYQLYSHAYTIPSVDG-LQAPT 657

Query:    68 AVIYREIA 75
             A ++  +A
Sbjct:   658 AAVWLNMA 665

GO:0055085 "transmembrane transport" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037887001 SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (493 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
pfam03169	619	pfam03169, OPT, OPT oligopeptide transporter prote	6e-17
TIGR00728	606	TIGR00728, OPT_sfam, oligopeptide transporter, OPT	3e-11

>gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein

 Score = 76.6 bits (189), Expect = 6e-17
 Identities = 38/180 (21%), Positives = 66/180 (36%), Gaps = 32/180 (17%)

Query: 1   MMSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPD 60
             +  + A D MQD KT + T +  ++ FV++++G  +G V+ P  L L + A+      
Sbjct: 437 GYNAAAQAGDFMQDLKTGHYTGAPPRAQFVAQLIGTLVGSVVNPGVLNLLNQAYGCTGAQ 496

Query: 61  GP---CKAPYAVIYREIAIPGIQGF-SEFPRH----------------YVNPKKISQFIP 100
           G    C AP A     +A   I G     P +                ++  K++ + + 
Sbjct: 497 GDSWTCPAPQAFFSAAVAWGVIGGKRFGLPYYALLWGFLVGAVAPVLDWLLHKRLPRSLA 556

Query: 101 IPTGMAIPFYSGAFFAVDIFVGA------------GSEEYAGAVVSGLICGDGIWSIASA 148
                 I  Y        I VG                +Y   + +GLI G+ +  +  A
Sbjct: 557 FAGAGTIGPYLPPSLTSAILVGGLFNYYVRRRRKAWWRKYNYVLAAGLIAGEALMGVIIA 616

The OPT family of oligopeptide transporters is distinct from the ABC pfam00005 and PTR pfam00854 transporter families. OPT transporters were first recognised in fungi (Candida albicans and Schizosaccharomyces pombe), but this alignment also includes orthologues from Arabidopsis thaliana. OPT transporters are thought to have 12-14 transmembrane domains and contain the following motif: SPYxEVRxxVxxxDDP. Length = 619

>gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily

 Score = 60.1 bits (146), Expect = 3e-11
 Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 43/184 (23%)

Query: 3   SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGP 62
                A D MQD KT +  ++  ++ F ++++G  +G ++    L    +A   ++ +  
Sbjct: 417 ITAQQAGDFMQDLKTGHYMKAPPRAQFAAQLIGTIVGSLVNAPVLEWLYHAIGNQNNNFT 476

Query: 63  CKAPYAVIYREIA-IPGIQG---FSEFPRHY---------VNP----------KKISQFI 99
           C  P A+++   + I G+ G   FS    +          V             K  ++I
Sbjct: 477 C--PNALVFFNASLIWGVIGPKIFSGKGLYCGLMWFFLVGVGAVLVWLVRKLFPKWIKYI 534

Query: 100 PIPTGMAIPFYSGAFFAVDIFVGAG------------------SEEYAGAVVSGLICGDG 141
             P  +    Y     AV+                        +E+Y   + +GLI G+ 
Sbjct: 535 NPPVAVGGGIYIPPATAVNYSTWGAVGGFFNYRWRKRHRARKNAEKYNYVLAAGLIAGEA 594

Query: 142 IWSI 145
           +  +
Sbjct: 595 LAGV 598

This superfamily has two main branches. One branch contains a tetrapeptide transporter demonstrated experimentally in three different species of yeast. The other family contains EspB of Myxococcus xanthus, a protein required for normal rather than delayed sporulation after cellular aggregation; its role is unknown but is compatible with transport of a signalling molecule. Homology between the two branches of the superfamily is seen most easily at the ends of the protein. The central regions are poorly conserved within each branch and may not be homologous between branches. Length = 606

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
KOG2262	761	consensus Sexual differentiation process protein I	100.0
TIGR00727	681	ISP4_OPT small oligopeptide transporter, OPT famil	100.0
TIGR00728	654	OPT_sfam oligopeptide transporters, OPT superfamil	99.98
TIGR00733	591	putative oligopeptide transporter, OPT family. Thi	99.97
PF03169	624	OPT: OPT oligopeptide transporter protein; InterPr	99.96
COG1297	624	Predicted membrane protein [Function unknown]	99.89

>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-36  Score=264.87  Aligned_cols=156  Identities=15%  Similarity=0.208  Sum_probs=136.7

Q ss_pred             hHHHHHHHHhhhhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCCC--CCCCCcccHHHHHHHhhcc-c
Q 042118            3 SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLT-LWLYSNAFDIRS--PDGPCKAPYAVIYREIAIP-G   78 (165)
Q Consensus         3 ~~~~qa~~~~qDlK~G~y~~~pPr~~f~~Q~iG~iig~~v~~~v-~~ll~~~~~i~~--~~~~~~~P~a~~~~~~a~~-~   78 (165)
                      .++.||..++||+|+|||||+|||.||.+|++||+++++|+.+| .|++.+++++||  ++++||||..++++++|++ |
T Consensus       530 ism~Qal~f~~DlKlghYMKIPPR~mF~~Q~v~tivs~~Vn~gv~~W~m~~I~~iC~~~~~s~~TCP~~rvffnASvIWG  609 (761)
T KOG2262|consen  530 ISMTQALTFLQDLKLGHYMKIPPRSMFAVQLVGTIVAGFVNLGVAWWLMYSIPNICTTDQNSPWTCPSDRVFFNASVIWG  609 (761)
T ss_pred             hhHHHHHHHHhhccceeeecCChHHHHHHHHHHHHhheeeeHHhHHHHHhcccccccCCCCCCccCCCCceEEeceeeee
Confidence            36799999999999999999999999999999999999999999 999999999998  5579999999999999999 9


Q ss_pred             cccCccc----------ccccc---------------cccc-cccccccccccccccccch----hhHhHHHhhc-----
Q 042118           79 IQGFSEF----------PRHYV---------------NPKK-ISQFIPIPTGMAIPFYSGA----FFAVDIFVGA-----  123 (165)
Q Consensus        79 ~~G~~~l----------p~~~~---------------~p~~-~~~~v~~~v~~~~~~~lP~----~~~~~~~vG~-----  123 (165)
                      ++||.++          -+.++               +|++ |.+++|.|+.++....+||    +|+.++.+|+     
T Consensus       610 lIGP~riF~~~g~Y~~l~wFFLiGa~~pv~vw~~~k~fPk~~w~~~i~~pvl~gg~~~mPpat~vny~sw~iv~fifny~  689 (761)
T KOG2262|consen  610 LIGPKRIFGSLGIYPGLNWFFLIGALAPVLVWLLQKKFPKKKWIKQINPPVLFGGTANMPPATAVNYTSWAIVGFIFNYY  689 (761)
T ss_pred             cccchhhcCCCCccCcchHHHHHHHHhhHHHHHHHHhcchhhhhhccCcceEecccccCCCccccchhHHHHHHHHHHHH
Confidence            9997654          11111               6764 5777999999999999998    4777777777     


Q ss_pred             -------cccchhhhhhhhHhhhHHHHHHHHH-HHHhCCCCCC
Q 042118          124 -------GSEEYAGAVVSGLICGDGIWSIASA-TLSVFRLNAP  158 (165)
Q Consensus       124 -------~~~~y~~~lasGL~aG~ai~giv~~-~l~~~~~~~p  158 (165)
                             ||+||||++|+|||||.++++++++ +++..+.+.+
T Consensus       690 i~r~~~~WW~kYNyvLsaaldaG~a~~~vliffcv~~~~~~~~  732 (761)
T KOG2262|consen  690 IFRYRRSWWQKYNYVLSAALDAGVAFMGVLIFFCVQYPGISLN  732 (761)
T ss_pred             HHHHHHHHHHHhhhHhhhhcccchhHHHhHhhheeccCCCccc
Confidence                   9999999999999999999999999 5787766543

>TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family

Probab=100.00  E-value=1.2e-34  Score=263.27  Aligned_cols=154  Identities=16%  Similarity=0.185  Sum_probs=131.7

Q ss_pred             hHHHHHHHHhhhhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCCCC--CCCCCcccHHHHHHHhhcc-c
Q 042118            3 SIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLT-LWLYSNAFDIRS--PDGPCKAPYAVIYREIAIP-G   78 (165)
Q Consensus         3 ~~~~qa~~~~qDlK~G~y~~~pPr~~f~~Q~iG~iig~~v~~~v-~~ll~~~~~i~~--~~~~~~~P~a~~~~~~a~~-~   78 (165)
                      ++.+||.+++||+|+|||||+|||.||++|++|+++|+++|+++ .|++++++|+||  ++++|+||.++++++.+++ |
T Consensus       481 ~~~~qa~~~~~DlKlGhY~kiPPR~~F~~Q~~gtl~~~~v~~~v~~~~l~~i~~~c~~~~~~~ftcp~~~~~f~asv~Wg  560 (681)
T TIGR00727       481 ITDGQADNFVSDLKIGHYMKIPPRALFRGQCVATIWQIFVQIGVLNWAIGNIDNFCTADQNAKYTCPNAVVFFNASVIWG  560 (681)
T ss_pred             HHHHHHHHHHHHhHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCCccCCCccceeehehhhh
Confidence            57899999999999999999999999999999999999999999 999999999998  4479999999999999999 9


Q ss_pred             cccCccc----------ccccc---------------cccccccccccccccccccccchh----hHhHHHhhc------
Q 042118           79 IQGFSEF----------PRHYV---------------NPKKISQFIPIPTGMAIPFYSGAF----FAVDIFVGA------  123 (165)
Q Consensus        79 ~~G~~~l----------p~~~~---------------~p~~~~~~v~~~v~~~~~~~lP~~----~~~~~~vG~------  123 (165)
                      ++|+.++          ++.++               +|+++.|++|.|++++....+|+.    +.....+|.      
T Consensus       561 ~iGP~r~F~~g~~Y~~l~~~fliGa~~pi~~~~~~r~~P~~~~~~~n~pv~~~~~g~~~~a~~~n~~s~~~vg~~f~~~i  640 (681)
T TIGR00727       561 VIGPKRIFSHGYIYPGLKWFWLIGACIGIFFWLVWKKWPKFYPRYLDWPMLFVGTGYIPPATPYNYMYYTSVGLFFQYYM  640 (681)
T ss_pred             hcchHHHcCCCCcchHHHHHHHHHHHHHHHHHHHHHhcchhhhhhCCccHHHhhccccCCcchhhHHHHHHHHHHHHHHH
Confidence            9996443          11111               677778899999999986666654    445556777      


Q ss_pred             ------cccchhhhhhhhHhhhHHHHHHHHH-HHHhCCCC
Q 042118          124 ------GSEEYAGAVVSGLICGDGIWSIASA-TLSVFRLN  156 (165)
Q Consensus       124 ------~~~~y~~~lasGL~aG~ai~giv~~-~l~~~~~~  156 (165)
                            ||+||||++|||||+|+++++++++ ++++.+.+
T Consensus       641 rr~~~~ww~kYnYvlsAald~G~a~~~~iiff~v~~~~~~  680 (681)
T TIGR00727       641 KKHHLNWWEKYNYVLSAGLDTGLVLSAIIIFFCLQLKDTA  680 (681)
T ss_pred             HHccHHHHHHhhHHHHHHHHHHHHHHHhHheeEEEeCCCC
Confidence                  9999999999999999999999998 57776653

This model represents a family of transporters of small oligopeptides, demonstrated experimentally in three different species of yeast. A set of related proteins from the plant Arabidopsis thaliana forms an outgroup to the yeast set by neighbor joining analysis but is remarkably well conserved and is predicted here to have equivalent function.

>TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily

Probab=99.98  E-value=1.2e-32  Score=250.57  Aligned_cols=145  Identities=23%  Similarity=0.350  Sum_probs=123.5

Q ss_pred             hhHHHHHHHHhhhhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCcccHHHHHHHhhcc-ccc
Q 042118            2 MSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSPDGPCKAPYAVIYREIAIP-GIQ   80 (165)
Q Consensus         2 ~~~~~qa~~~~qDlK~G~y~~~pPr~~f~~Q~iG~iig~~v~~~v~~ll~~~~~i~~~~~~~~~P~a~~~~~~a~~-~~~   80 (165)
                      .++++||.|++||||+|||+|+|||+||.+|++|+++|++++++++..+.+.++..  +++|+||++++|+++|++ +++
T Consensus       464 ~~~~~qA~~~~qDlK~G~y~~~pPR~~f~~Qiig~~vg~~v~~~v~~~~~~~~~~~--~~~~~~p~a~~~~~aa~~~g~~  541 (654)
T TIGR00728       464 FITAQQAGDFMQDLKTGHYMKAPPRAQFAAQLIGTIVGSLVNAPVLEWLYHAIGNQ--NNNFTCPNALVFYNASLIWGVI  541 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--CCCccCCcccchhhheeeeccc
Confidence            46899999999999999999999999999999999999999999976666777664  578999999999999998 878


Q ss_pred             c---Ccccccc--c----c--------------cccccccccccccccccccccchhhHhHHH----hhc----------
Q 042118           81 G---FSEFPRH--Y----V--------------NPKKISQFIPIPTGMAIPFYSGAFFAVDIF----VGA----------  123 (165)
Q Consensus        81 G---~~~lp~~--~----~--------------~p~~~~~~v~~~v~~~~~~~lP~~~~~~~~----vG~----------  123 (165)
                      |   +++.+.|  +    +              +|| +.+++|+|+++++++++|++++++++    +|+          
T Consensus       542 Gp~~f~~~~~y~~~~~~~l~G~~~i~~~~~~~~~p~-~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vG~~~~~~~~rr~  620 (654)
T TIGR00728       542 GPKIFSGKGLYCGLMWFFLVGVGAVLVWLVRKLFPK-WIKYINPPVAVGGGGYIPPATAVNYSTWAAVGGFFNYRWRKNK  620 (654)
T ss_pred             cchhcCCCCccHHHHHHHHHHHHHHHHHHHHHHccc-hhhhcCHHHhhhhhhccCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence            8   3321111  1    0              233 56789999999999999999888887    887          


Q ss_pred             --cc--cchhhhhhhhHhhhHHHHHHHHHH
Q 042118          124 --GS--EEYAGAVVSGLICGDGIWSIASAT  149 (165)
Q Consensus       124 --~~--~~y~~~lasGL~aG~ai~giv~~~  149 (165)
                        ||  +||||++||||||||+|+++++++
T Consensus       621 ~~~~~~~~y~~~laagL~~G~al~gviiff  650 (654)
T TIGR00728       621 RADWKAEKYNYVLAAGLIAGEALAGVIIFF  650 (654)
T ss_pred             hhhhhhhhhHHHHHHHHhhhHHHHHHHHHH
Confidence              44  899999999999999999999974

Homology between the two branches of the superfamily is seen most easily at the ends of the protein. The central regions are poorly conserved within each branch and may not be homologous between branches.

>TIGR00733 putative oligopeptide transporter, OPT family

Probab=99.97  E-value=1.4e-30  Score=234.21  Aligned_cols=148  Identities=22%  Similarity=0.297  Sum_probs=123.4

Q ss_pred             hhHHHHHHHHhhhhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC-----CCCCCcccHHHHHHHhhc
Q 042118            2 MSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRS-----PDGPCKAPYAVIYREIAI   76 (165)
Q Consensus         2 ~~~~~qa~~~~qDlK~G~y~~~pPr~~f~~Q~iG~iig~~v~~~v~~ll~~~~~i~~-----~~~~~~~P~a~~~~~~a~   76 (165)
                      .++++||.|++||||+||++|++||+||++|++|+++|+++.+++++++.++|++++     |+++|++||+..|+++++
T Consensus       404 ~~aa~~AgD~mqDlKtG~LlGatPr~Q~~aq~iG~~vg~~v~~~v~~ll~~ayg~~~~~~~~~~~~l~APqA~l~~ava~  483 (591)
T TIGR00733       404 CTAAAISNDNLQDLKTGYLVGATPWRQQVALIIGTFVGALVMAPVLNLLIKAYGIAGTPTAKGENALPAPQAFLMAAVTE  483 (591)
T ss_pred             HHHHHHHHHHhHhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccccCCCHHHHHHHHHh
Confidence            568999999999999999999999999999999999999999999999999998753     446799999999999997


Q ss_pred             cccccCcccccccc----------------cccccccccccccccccccccchhhHhHHHhhc----cc-----------
Q 042118           77 PGIQGFSEFPRHYV----------------NPKKISQFIPIPTGMAIPFYSGAFFAVDIFVGA----GS-----------  125 (165)
Q Consensus        77 ~~~~G~~~lp~~~~----------------~p~~~~~~v~~~v~~~~~~~lP~~~~~~~~vG~----~~-----------  125 (165)
                      ....+  .+|+.+.                .+++++++-.+++++++|+|+|+++++++++|+    .|           
T Consensus       484 gi~~~--~l~~~~i~~ga~~g~~l~~~~~~~~~~~~~~~~p~lavgig~yLP~~~s~~~~iG~li~~~~~r~~~~~~~~~  561 (591)
T TIGR00733       484 GVFTG--TLEWTMVFIGAGIGIALIIIDEILAKRGSKFRTPVMAVGVGIYLPLSLGVPILLGAFLARILVSRGRKEGESF  561 (591)
T ss_pred             hhcCC--CccHHHHHHHHHHHHHHHHHHHHhhhcccccCCchhHHHHHhhcchhHHHHHHHHHHHHHHHHHhcccccchh
Confidence            65443  4565432                233333433458999999999999999999999    11           


Q ss_pred             ---cchhhhhhhhHhhhHHHHHHHHHHHH
Q 042118          126 ---EEYAGAVVSGLICGDGIWSIASATLS  151 (165)
Q Consensus       126 ---~~y~~~lasGL~aG~ai~giv~~~l~  151 (165)
                         +++.+++||||++||+++|++++++.
T Consensus       562 ~~~~~~g~~vASGLIaGE~l~Gv~~A~~~  590 (591)
T TIGR00733       562 TDKKRLGVLGAAGLIVGESLTGVVFAAII  590 (591)
T ss_pred             hhhhceeeEEecHhhcchHHHHHHHHHHh
Confidence               24578999999999999999998753

This protein represents a small family of integral membrane proteins from Gram-negative bacteria, a Gram-positive bacteria, and an archaeal species. Members of this family contain 15 to 18 GES predicted transmembrane regions, and this family has extensive homology to a family of yeast tetrapeptide transporters, including isp4 (Schizosaccharomyces pombe) and Opt1 (Candida albicans). EspB, an apparent equivalog from Myxococcus xanthus, shares an operon with a two component system regulatory protein, and is required for the normal timing of sporulation after the aggregation of cells. This is consistent with a role in transporting oligopeptides as signals across the membrane.

>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast

Probab=99.96  E-value=1.2e-29  Score=229.56  Aligned_cols=149  Identities=25%  Similarity=0.386  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHhhhhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC---CCCCcccHHHHHHHhhccc
Q 042118            2 MSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRSP---DGPCKAPYAVIYREIAIPG   78 (165)
Q Consensus         2 ~~~~~qa~~~~qDlK~G~y~~~pPr~~f~~Q~iG~iig~~v~~~v~~ll~~~~~i~~~---~~~~~~P~a~~~~~~a~~~   78 (165)
                      .++++||.|++||||+|||+|+|||+||.+|++|+++|+++++++++++++.|...++   +.++++|++..|++++...
T Consensus       444 ~~~~~qa~~~~~DlK~G~~l~~~Pr~~f~~Q~iG~~ig~~v~~~v~~l~~~~~~~~~~~~~~~~~~ap~a~~~aav~~g~  523 (624)
T PF03169_consen  444 YAAASQAGDLMQDLKTGHYLGIPPRAQFYAQIIGTIIGAFVAVAVMRLLNQAYPCGPDQGDSFSCPAPQAFAWAAVAWGL  523 (624)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccCcCcchHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999999999999998888666665421   3456677788887777655


Q ss_pred             cccCcccccccc-----------ccc-ccccccccccccc----cccccchhhHhHHHhhc------------cccchhh
Q 042118           79 IQGFSEFPRHYV-----------NPK-KISQFIPIPTGMA----IPFYSGAFFAVDIFVGA------------GSEEYAG  130 (165)
Q Consensus        79 ~~G~~~lp~~~~-----------~p~-~~~~~v~~~v~~~----~~~~lP~~~~~~~~vG~------------~~~~y~~  130 (165)
                      ..+..++|++.+           .+. -..|++|.+++++    +++++|++++.++++|+            ||+||||
T Consensus       524 ~~~~~~~~~~~~~~~~~~G~~~~i~~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~y~~  603 (624)
T PF03169_consen  524 IGPQRGLPYSALPWGFLIGAVLPILFWLLQRKFPSPLAFGGASSIGFYLPSNYTSAIFIGGLFQFYWRRRYPKWWEKYNY  603 (624)
T ss_pred             cCCcccchHHHHHHHHHHHHHHHHHHHHHHhhCChhheeeecccccccchhHHHHHHHHHHHHHHHhhhcchhHHHhHhh
Confidence            443234454433           111 2367899889999    99999999999999999            7899999


Q ss_pred             hhhhhHhhhHHHHHHHHHHH
Q 042118          131 AVVSGLICGDGIWSIASATL  150 (165)
Q Consensus       131 ~lasGL~aG~ai~giv~~~l  150 (165)
                      ++|||||+||++++++++++
T Consensus       604 ~laagl~aG~~l~~li~~~~  623 (624)
T PF03169_consen  604 VLAAGLIAGEALMGLIIAFL  623 (624)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999864

OPT1 is not a member of the ABC or PTR membrane transport families [].; GO: 0055085 transmembrane transport

>COG1297 Predicted membrane protein [Function unknown]

Probab=99.89  E-value=1.3e-23  Score=185.58  Aligned_cols=155  Identities=21%  Similarity=0.303  Sum_probs=126.6

Q ss_pred             hhHHHHHHHHhhhhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC----CCCCCcccHHHHHHHhhcc
Q 042118            2 MSIISIAADLMQDFKTDYLTRSSAKSVFVSEVLGAAMGCVIGPLTLWLYSNAFDIRS----PDGPCKAPYAVIYREIAIP   77 (165)
Q Consensus         2 ~~~~~qa~~~~qDlK~G~y~~~pPr~~f~~Q~iG~iig~~v~~~v~~ll~~~~~i~~----~~~~~~~P~a~~~~~~a~~   77 (165)
                      ..++.++.|++|||||||++|++||+||.+|++|+++++++..+++.+++++|++..    ++.+.++||+..+.+++..
T Consensus       428 ~a~A~is~DnlQDLKTG~LvgATPwkQqvaliiG~~~~alvi~pvL~ll~~aYgf~ga~~r~~~~l~apqa~lma~ia~G  507 (624)
T COG1297         428 AAVAAISNDNLQDLKTGYLVGATPWKQQVALIIGCFVGALVIAPVLELLNKAYGFAGAPPRQGMDLAAPQATLMATIAKG  507 (624)
T ss_pred             HHHHHhhccchhhhhhCeeecCChHHHHHHHHHhHHhhhhhHHHHHHHHHHHhCcCCCCCCCCCCCcchHHHHHHHHhcc
Confidence            357889999999999999999999999999999999999999999999999999864    1124899999999998864


Q ss_pred             ccccCcccccccc------------cc----cccccccccccccccccccchhhHhHHHhhc-----------c------
Q 042118           78 GIQGFSEFPRHYV------------NP----KKISQFIPIPTGMAIPFYSGAFFAVDIFVGA-----------G------  124 (165)
Q Consensus        78 ~~~G~~~lp~~~~------------~p----~~~~~~v~~~v~~~~~~~lP~~~~~~~~vG~-----------~------  124 (165)
                      ...  +.+.|.++            .+    +++.++.++++++++|.|+||+.+.++++|+           |      
T Consensus       508 vf~--~~lew~mi~~g~~~gi~lI~id~~l~~~~~~~~lpvlAvGvGIylP~s~~ipi~vG~~l~~~v~~~~~~~~~~~~  585 (624)
T COG1297         508 VFT--GNLEWSMILAGAGIGIVLIGIDERLKGRGGKLRLPVLAVGVGIYLPPSLTIPIFVGGVLRWAVDRKLKKGDERYK  585 (624)
T ss_pred             cCC--CCcchHHHHHHHhHhheeeeccHHHhcCCccccccceeeeeeeecChhhchHHHHHHHHHHHHHHhcccccchhh
Confidence            332  34555443            11    2445566669999999999999999999999           1      


Q ss_pred             --ccchhhhhhhhHhhhHHHHHHHHHHHHhC-CCCCC
Q 042118          125 --SEEYAGAVVSGLICGDGIWSIASATLSVF-RLNAP  158 (165)
Q Consensus       125 --~~~y~~~lasGL~aG~ai~giv~~~l~~~-~~~~p  158 (165)
                        .+|..+++||||+.||++.|++.+.+... |.+.|
T Consensus       586 e~~~r~gvl~aaGLIvGEsL~gvi~a~ii~~~g~~~p  622 (624)
T COG1297         586 ERAKRIGVLFAAGLIVGESLFGVITALIIVGSGKEAP  622 (624)
T ss_pred             hcccceeEEEeeccccchHHHHHHHHHHheecCCCCC
Confidence              13478999999999999999999987654 44444

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00