Citrus Sinensis ID: 042128

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
Protein Sequence
MESAHAIDMPESKKANGSGKGKAAVGAPAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRRRT
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccEEEcccccHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mesahaidmpeskkangsgkgkaavgapaaavattkatphprggwkkgVAIFDFVLRLAAIGAALgatatmgtadeilPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPfsilcivrphavgprLLLLIGDTVMMALTIGAAAAAASVVYLAhsgnpnanwlpicQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRRRT
Flexible Loop (DISEMBL)
mesahaidmpeskkangsgKGKAAVGAPAAAVattkatphprggwKKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRRRT
Low Complexity Region (SEG)
MESAHAIDMPESKKANGSgkgkaavgapaaavattkatpHPRGGWKKGVAIFDFVlrlaaigaalgatatmgtaDEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGaaaaaaSVVYLAHSGNPNANWLPICQQFGDFCQSTssavvasliaaalllilivlsafalRRRT
Disordered region (IsUnstruct)
*****************************************RGGWKKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFAL****
Disordered Region (DISOPRED)
**************************************************IFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRR**
Disordered Region (DISEMBL)
*******************************************GWKKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRRRT
Disordered Region (DISPRO)
*******************************************GWKKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRR**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESAHAIDMPESKKANGSGKGKAAVGAPAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRRRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	211	2.2.26 [Sep-21-2011]
C6T4E0	218	Casparian strip membrane	yes	no	0.985	0.954	0.633	5e-70
B9SCX0	215	Casparian strip membrane	N/A	no	0.966	0.948	0.658	6e-69
P0DI56	219	Casparian strip membrane	N/A	no	0.947	0.913	0.615	2e-58
A7QF77	201	Casparian strip membrane	yes	no	0.928	0.975	0.653	1e-57
Q9ZQI2	221	Casparian strip membrane	yes	no	0.976	0.932	0.565	1e-57
B9SX12	200	Casparian strip membrane	N/A	no	0.928	0.98	0.583	7e-57
G7IHF9	220	Casparian strip membrane	N/A	no	0.990	0.95	0.591	1e-56
P0DI49	207	Casparian strip membrane	N/A	no	0.786	0.801	0.668	3e-55
D7LGW9	221	Casparian strip membrane	N/A	no	0.976	0.932	0.565	5e-55
P0DI32	207	Casparian strip membrane	N/A	no	0.957	0.975	0.570	9e-55

>sp|C6T4E0|CASP5_SOYBN Casparian strip membrane protein 5 OS=Glycine max PE=2 SV=1

 Score =  263 bits (673), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 133/210 (63%), Positives = 166/210 (79%), Gaps = 2/210 (0%)

Query: 2   ESAHAIDMPESKKANGSGKGKAAVGA--PAAAVATTKATPHPRGGWKKGVAIFDFVLRLA 59
           E+  A   PES++   +GK KA   A  P+A V +TKATP PRGGWKKGVAI DF++RL 
Sbjct: 8   EAPAATSSPESRRTRSNGKVKAFADAAPPSATVVSTKATPLPRGGWKKGVAILDFIIRLG 67

Query: 60  AIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSI 119
           AIG+ALGA A MG +++ILPFFTQFFQF AQ+DDF +F FFV ANG    +L+LSLPFSI
Sbjct: 68  AIGSALGAAAIMGNSEQILPFFTQFFQFHAQWDDFPMFQFFVFANGAAGGFLILSLPFSI 127

Query: 120 LCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFC 179
           +CIVRP+ VGPRLLL+I D +MMAL + AA++AA+VVYLAH+G+ +ANW+ ICQQF DFC
Sbjct: 128 VCIVRPYTVGPRLLLVILDILMMALVMAAASSAAAVVYLAHNGSQDANWIAICQQFTDFC 187

Query: 180 QSTSSAVVASLIAAALLLILIVLSAFALRR 209
           Q TS AVVAS +AA LL+ LIV+S+ AL+R
Sbjct: 188 QVTSEAVVASFVAAFLLICLIVVSSVALKR 217

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.
Glycine max (taxid: 3847)

>sp|B9SCX0|CASP1_RICCO Casparian strip membrane protein RCOM_1282030 OS=Ricinus communis GN=RCOM_1282030 PE=3 SV=1

 Score =  260 bits (664), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 135/205 (65%), Positives = 155/205 (75%), Gaps = 1/205 (0%)

Query: 7   IDMPESKKANGSGKGKAAVGAPAAAVATTKATPH-PRGGWKKGVAIFDFVLRLAAIGAAL 65
           I + E K A+  GKG A    P   V T KA    PRGGWKKGVAIFDFV+RL AI   L
Sbjct: 11  ITIQEPKAADPKGKGIADAPPPPVVVTTAKAIQKLPRGGWKKGVAIFDFVVRLCAIATGL 70

Query: 66  GATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRP 125
            AT  MGT ++ LPFFTQFFQF A+Y+D   FMFFV ANG+ S YL+LSLPFSI+CIVRP
Sbjct: 71  AATGIMGTTEQTLPFFTQFFQFHAEYNDLPTFMFFVFANGIASGYLILSLPFSIVCIVRP 130

Query: 126 HAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSA 185
            A+ PRLLL+I DTV+MALTI AA+AAA++VYLAH+GN NANW  ICQQF DFCQ TS+A
Sbjct: 131 LAIVPRLLLIIFDTVVMALTIAAASAAAAIVYLAHNGNSNANWNAICQQFNDFCQQTSTA 190

Query: 186 VVASLIAAALLLILIVLSAFALRRR 210
           VVAS I AA+L  LIVLSAFAL+R 
Sbjct: 191 VVASFITAAMLTFLIVLSAFALKRN 215

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Ricinus communis (taxid: 3988)

>sp|P0DI56|CASP2_LOTJA Casparian strip membrane protein 2 OS=Lotus japonicus PE=2 SV=1

 Score =  225 bits (573), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/203 (61%), Positives = 153/203 (75%), Gaps = 3/203 (1%)

Query: 10  PESKKANGSGKGKAAVG---APAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALG 66
           PES++   +G+GKA VG    PA  V +TKA P P GGWKKG+AI DF+LRL AIGAA+G
Sbjct: 16  PESRRTRSNGRGKATVGDAPPPAETVVSTKAAPLPTGGWKKGIAILDFILRLGAIGAAMG 75

Query: 67  ATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPH 126
           A+  MGT ++ILPFFTQF QF AQ+DDF VF  FV+ N L   +L+LSLP SI+CIVRP 
Sbjct: 76  ASILMGTNEQILPFFTQFLQFHAQWDDFPVFKLFVVLNALAGGFLILSLPLSIVCIVRPL 135

Query: 127 AVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAV 186
           AVGPR LLLI D V MA  I AA+AAA++VY+AH+G+ +ANW+ ICQQF DFCQ TS AV
Sbjct: 136 AVGPRFLLLITDLVNMATVIAAASAAAAIVYVAHNGSQDANWIAICQQFTDFCQGTSEAV 195

Query: 187 VASLIAAALLLILIVLSAFALRR 209
           V S +AA  L+ LIV+S  AL+R
Sbjct: 196 VVSFVAAVFLVCLIVVSTLALKR 218

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Lotus japonicus (taxid: 34305)

>sp|A7QF77|CASP1_VITVI Casparian strip membrane protein VIT_06s0080g00840 OS=Vitis vinifera GN=VIT_06s0080g00840 PE=2 SV=1

 Score =  223 bits (567), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 161/208 (77%), Gaps = 12/208 (5%)

Query: 3   SAHAIDMPESKKANGSGKGKAAVGAPAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIG 62
            A AI++ E+K A+            A  VATTKA  HP+ G K+G+AIFDF+LRL+AIG
Sbjct: 6   EATAINIGETKSAS------------ATTVATTKAIQHPKAGLKRGLAIFDFILRLSAIG 53

Query: 63  AALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCI 122
           AAL AT TMGT D+ LPFFTQFFQF+A YDD   F FFVIAN + S YL LSLPFSI+CI
Sbjct: 54  AALAATTTMGTTDQTLPFFTQFFQFQASYDDLPAFSFFVIANAIASGYLFLSLPFSIVCI 113

Query: 123 VRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQST 182
           VRPHA+G RLLL+I DTVM+ALTI AAAAAA++VYLAH+GN NANW+ ICQQF DFCQS 
Sbjct: 114 VRPHAMGARLLLVICDTVMVALTIAAAAAAAAIVYLAHNGNSNANWVAICQQFDDFCQSV 173

Query: 183 SSAVVASLIAAALLLILIVLSAFALRRR 210
           S AVVAS IAA L +++IVLSAF+LR+ 
Sbjct: 174 SGAVVASFIAAVLFMLMIVLSAFSLRKH 201

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Vitis vinifera (taxid: 29760)

>sp|Q9ZQI2|CASP3_ARATH Casparian strip membrane protein 3 OS=Arabidopsis thaliana GN=CASP3 PE=1 SV=1

 Score =  222 bits (566), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 121/214 (56%), Positives = 146/214 (68%), Gaps = 8/214 (3%)

Query: 2   ESAHAIDMPESKKANGSGKGKAAVGAPAAA----VATTKATPHPRGGWKKGVAIFDFVLR 57
           E    +  P+  K    GKGKA V AP       +   K       GWK+GVAIFDFVLR
Sbjct: 12  EEEPIVQRPKLDK----GKGKAHVFAPPMNYNRIMDKHKQEKMSPAGWKRGVAIFDFVLR 67

Query: 58  LAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPF 117
           L A   A+ A A M T +E LPFFTQF QF+A Y D      FVI N +V  YL LSLPF
Sbjct: 68  LIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIVNSIVGGYLTLSLPF 127

Query: 118 SILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGD 177
           SI+CI+RP AV PRL L++ DTVMM LT+ AA+A+A++VYLAH+GN ++NWLP+CQQFGD
Sbjct: 128 SIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGD 187

Query: 178 FCQSTSSAVVASLIAAALLLILIVLSAFALRRRT 211
           FCQ TS AVVAS IAA LL+ L++LSAFAL+R T
Sbjct: 188 FCQGTSGAVVASFIAATLLMFLVILSAFALKRTT 221

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Arabidopsis thaliana (taxid: 3702)

>sp|B9SX12|CASP3_RICCO Casparian strip membrane protein RCOM_1259250 OS=Ricinus communis GN=RCOM_1259250 PE=2 SV=1

 Score =  220 bits (560), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 119/204 (58%), Positives = 148/204 (72%), Gaps = 8/204 (3%)

Query: 7   IDMPESKKANGSGKGKAAVGAPAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALG 66
           I++P    A   GK        A  +  + ++   +GG+KKG+AIFDF+LRL A+ +AL 
Sbjct: 5   IEIPAESSAVAKGK--------APLIGASSSSYEKKGGYKKGIAIFDFILRLGAVISALS 56

Query: 67  ATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPH 126
           A ATMGT+DE LPFFTQFFQFEA YDDF  F FFVIA G V  YLVLSLPFS++ I+RPH
Sbjct: 57  AAATMGTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIRPH 116

Query: 127 AVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAV 186
           AVG RLLLLI DTV + L   AAAAAA++VYLAH+GN +ANWL +CQQFGDFCQ  S  V
Sbjct: 117 AVGIRLLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSGGV 176

Query: 187 VASLIAAALLLILIVLSAFALRRR 210
           VAS ++  + L+L+V+SA ALR+ 
Sbjct: 177 VASFVSVLVFLLLVVMSAVALRKH 200

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Ricinus communis (taxid: 3988)

>sp|G7IHF9|CASP1_MEDTR Casparian strip membrane protein MTR_2g086740 OS=Medicago truncatula GN=MTR_2g086740 PE=3 SV=1

 Score =  219 bits (557), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/213 (59%), Positives = 161/213 (75%), Gaps = 4/213 (1%)

Query: 1   MESAHAIDMPESKKANGSGKGKAAVG--AP--AAAVATTKATPHPRGGWKKGVAIFDFVL 56
           +E +    + ESK+   +GKGK+  G  +P  AA V TTKATP  +GG KKG+AI DF+L
Sbjct: 7   VEESSTAPILESKRTRSNGKGKSIDGDHSPPHAATVVTTKATPLQKGGMKKGIAILDFIL 66

Query: 57  RLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLP 116
           RL AIGAALGA   MGT ++ILPFFTQF QF AQ+DDF +F FFV+ANG  + +L+LSLP
Sbjct: 67  RLGAIGAALGAAVIMGTNEQILPFFTQFLQFHAQWDDFPMFKFFVVANGAAAGFLILSLP 126

Query: 117 FSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFG 176
           FSI+CIVRP A GPR LL+I D V+MAL + AA++AA+VVYLAH+G+ +ANW  ICQQF 
Sbjct: 127 FSIVCIVRPLAAGPRFLLVIVDLVLMALVVAAASSAAAVVYLAHNGSQDANWNAICQQFT 186

Query: 177 DFCQSTSSAVVASLIAAALLLILIVLSAFALRR 209
           DFCQ +S AVVAS +A+  L  L+V+S+ AL+R
Sbjct: 187 DFCQGSSLAVVASFVASVFLACLVVVSSVALKR 219

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Medicago truncatula (taxid: 3880)

>sp|P0DI49|CASP_RAPRA Casparian strip membrane protein 1 OS=Raphanus raphanistrum PE=2 SV=1

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 111/166 (66%), Positives = 138/166 (83%)

Query: 45  WKKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIAN 104
           +K+G+A+FDF+LRLAAIG  +GA++ M TA+E LPFFTQF QF+A YDDF  F FFVIA 
Sbjct: 42  YKRGLAVFDFLLRLAAIGITIGASSVMFTAEETLPFFTQFLQFQAGYDDFPTFQFFVIAI 101

Query: 105 GLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNP 164
            +V++YLVLSLPFSI+ IVRP AV PRL+LLI DTV++ LT  AAAAAAS+VYLAH+GN 
Sbjct: 102 AIVASYLVLSLPFSIVTIVRPLAVAPRLILLISDTVVLTLTTAAAAAAASIVYLAHNGNT 161

Query: 165 NANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFALRRR 210
           N NWLPICQQFGDFCQ+ S+AVVA+ I+ A  ++LIV+SA AL+R 
Sbjct: 162 NTNWLPICQQFGDFCQTASTAVVAASISVAFFVLLIVISAIALKRH 207

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Raphanus raphanistrum (taxid: 109996)

>sp|D7LGW9|CASP3_ARALL Casparian strip membrane protein ARALYDRAFT_901635 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_901635 PE=3 SV=1

 Score =  213 bits (543), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/214 (56%), Positives = 146/214 (68%), Gaps = 8/214 (3%)

Query: 2   ESAHAIDMPESKKANGSGKGKAAVGAPAAA----VATTKATPHPRGGWKKGVAIFDFVLR 57
           E    +  P+  K    GKGKA V AP       +   K       GWK+GVAIFDFVLR
Sbjct: 12  EEEPIVQRPKLDK----GKGKAHVFAPPMNYNRIMDKHKQEKVSAAGWKRGVAIFDFVLR 67

Query: 58  LAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPF 117
           L A   A+ A A M T +E LPFFTQF QF+A+Y D      FVI N +V  YL LSLPF
Sbjct: 68  LIAAITAMAAAAKMATTEETLPFFTQFLQFQAEYTDLPTMSSFVIVNSIVGGYLTLSLPF 127

Query: 118 SILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGD 177
           SI+CI+RP AV PRL L+I DT MM LT+ AA+A+A++VYLAH+GN ++NWLP+CQQFGD
Sbjct: 128 SIVCILRPLAVPPRLFLIICDTAMMGLTMMAASASAAIVYLAHNGNSSSNWLPVCQQFGD 187

Query: 178 FCQSTSSAVVASLIAAALLLILIVLSAFALRRRT 211
           FCQ TS AVVAS IAA LL+ L++LSAFAL+R T
Sbjct: 188 FCQGTSGAVVASFIAATLLMFLVILSAFALKRST 221

Regulates membrane-cell wall junctions and localised cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|P0DI32|CASP_TARKO Casparian strip membrane protein 1 OS=Taraxacum kok-saghyz PE=2 SV=1

 Score =  213 bits (541), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 118/207 (57%), Positives = 148/207 (71%), Gaps = 5/207 (2%)

Query: 3   SAHAIDMPESKKANGSGKGKAAVGAPAAAVATTKATPH--PRGGWKKGVAIFDFVLRLAA 60
            + A+++ E+ K     KGKA + AP  A    K      P+GG+K+G+A+FD VLR+A 
Sbjct: 4   ESTAVNITETPKER---KGKAPLLAPPPASGGIKTIVQKAPKGGYKRGLAVFDVVLRIAG 60

Query: 61  IGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSIL 120
           I AALGA   MG+ D+ LPFFTQFFQF+A++DD  VF FFVIAN + +AYL LS+P SI+
Sbjct: 61  IAAALGAVIAMGSTDQTLPFFTQFFQFKAEFDDLPVFTFFVIANAITAAYLALSIPISIV 120

Query: 121 CIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQ 180
           CI+RPH VGPR+LL   DTVM+ LT  AA  AAS+VYLAH+GN +ANW  ICQQF DFCQ
Sbjct: 121 CIIRPHLVGPRVLLTFLDTVMVGLTTAAAGGAASIVYLAHNGNSDANWPAICQQFNDFCQ 180

Query: 181 STSSAVVASLIAAALLLILIVLSAFAL 207
             S AVVAS I   +L+ LIVLSAF+L
Sbjct: 181 EVSGAVVASFITVVVLMFLIVLSAFSL 207

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion.

Taraxacum kok-saghyz (taxid: 333970)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	211
351725825	218	casparian strip membrane protein 5 [Glyc	0.985	0.954	0.633	3e-68
255565699	215	conserved hypothetical protein [Ricinus	0.966	0.948	0.658	3e-67
255640352	223	unknown [Glycine max]	0.981	0.928	0.622	3e-59
391738021	219	RecName: Full=Casparian strip membrane p	0.947	0.913	0.615	1e-56
225464888	201	PREDICTED: casparian strip membrane prot	0.928	0.975	0.653	6e-56
339515837	229	casparian strip protein 3 [Cloning vecto	0.919	0.847	0.595	7e-56
15225873	221	uncharacterized protein [Arabidopsis tha	0.976	0.932	0.565	7e-56
255579373	200	conserved hypothetical protein [Ricinus	0.928	0.98	0.583	3e-55
357453139	220	hypothetical protein MTR_2g086740 [Medic	0.990	0.95	0.591	8e-55
356574032	212	PREDICTED: casparian strip membrane prot	0.914	0.910	0.567	1e-53

>gi|351725825|ref|NP_001236338.1| casparian strip membrane protein 5 [Glycine max] gi|288559170|sp|C6T4E0.1|CASP5_SOYBN RecName: Full=Casparian strip membrane protein 5 gi|255632400|gb|ACU16550.1| unknown [Glycine max]

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 133/210 (63%), Positives = 166/210 (79%), Gaps = 2/210 (0%)

Query: 2   ESAHAIDMPESKKANGSGKGKAAVGA--PAAAVATTKATPHPRGGWKKGVAIFDFVLRLA 59
           E+  A   PES++   +GK KA   A  P+A V +TKATP PRGGWKKGVAI DF++RL 
Sbjct: 8   EAPAATSSPESRRTRSNGKVKAFADAAPPSATVVSTKATPLPRGGWKKGVAILDFIIRLG 67

Query: 60  AIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSI 119
           AIG+ALGA A MG +++ILPFFTQFFQF AQ+DDF +F FFV ANG    +L+LSLPFSI
Sbjct: 68  AIGSALGAAAIMGNSEQILPFFTQFFQFHAQWDDFPMFQFFVFANGAAGGFLILSLPFSI 127

Query: 120 LCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFC 179
           +CIVRP+ VGPRLLL+I D +MMAL + AA++AA+VVYLAH+G+ +ANW+ ICQQF DFC
Sbjct: 128 VCIVRPYTVGPRLLLVILDILMMALVMAAASSAAAVVYLAHNGSQDANWIAICQQFTDFC 187

Query: 180 QSTSSAVVASLIAAALLLILIVLSAFALRR 209
           Q TS AVVAS +AA LL+ LIV+S+ AL+R
Sbjct: 188 QVTSEAVVASFVAAFLLICLIVVSSVALKR 217

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565699|ref|XP_002523839.1| conserved hypothetical protein [Ricinus communis] gi|238055378|sp|B9SCX0.1|CASP1_RICCO RecName: Full=Casparian strip membrane protein RCOM_1282030 gi|223536927|gb|EEF38565.1| conserved hypothetical protein [Ricinus communis]

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 135/205 (65%), Positives = 155/205 (75%), Gaps = 1/205 (0%)

Query: 7   IDMPESKKANGSGKGKAAVGAPAAAVATTKATPH-PRGGWKKGVAIFDFVLRLAAIGAAL 65
           I + E K A+  GKG A    P   V T KA    PRGGWKKGVAIFDFV+RL AI   L
Sbjct: 11  ITIQEPKAADPKGKGIADAPPPPVVVTTAKAIQKLPRGGWKKGVAIFDFVVRLCAIATGL 70

Query: 66  GATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRP 125
            AT  MGT ++ LPFFTQFFQF A+Y+D   FMFFV ANG+ S YL+LSLPFSI+CIVRP
Sbjct: 71  AATGIMGTTEQTLPFFTQFFQFHAEYNDLPTFMFFVFANGIASGYLILSLPFSIVCIVRP 130

Query: 126 HAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSA 185
            A+ PRLLL+I DTV+MALTI AA+AAA++VYLAH+GN NANW  ICQQF DFCQ TS+A
Sbjct: 131 LAIVPRLLLIIFDTVVMALTIAAASAAAAIVYLAHNGNSNANWNAICQQFNDFCQQTSTA 190

Query: 186 VVASLIAAALLLILIVLSAFALRRR 210
           VVAS I AA+L  LIVLSAFAL+R 
Sbjct: 191 VVASFITAAMLTFLIVLSAFALKRN 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255640352|gb|ACU20464.1| unknown [Glycine max]

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/209 (62%), Positives = 161/209 (77%), Gaps = 2/209 (0%)

Query: 2   ESAHAIDMPESKK--ANGSGKGKAAVGAPAAAVATTKATPHPRGGWKKGVAIFDFVLRLA 59
           E+  A   PES++  +NG GKG A    P+A V +TKATP PR GWKKGVAI DF+LRL 
Sbjct: 8   EAPAATTSPESRRTRSNGKGKGIADAAPPSATVVSTKATPLPRAGWKKGVAILDFILRLG 67

Query: 60  AIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSI 119
            IG+AL A A MG +++ILPFFTQFFQF AQ+DDF +F FFV ANG    +L+LSLPFSI
Sbjct: 68  TIGSALRAAAIMGNSEQILPFFTQFFQFHAQWDDFPMFQFFVFANGAAGGFLILSLPFSI 127

Query: 120 LCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFC 179
           +CIVRP AVGPRLLL+I D +MMAL + AA+AAA+VVYLAH+G+ +ANW+ ICQQF DFC
Sbjct: 128 VCIVRPFAVGPRLLLVILDILMMALVMAAASAAAAVVYLAHNGSQDANWIAICQQFTDFC 187

Query: 180 QSTSSAVVASLIAAALLLILIVLSAFALR 208
             TS A+VAS +AA  L+ LIV+S+ AL+
Sbjct: 188 HVTSEAMVASFVAAFFLICLIVVSSVALK 216

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|391738021|sp|P0DI56.1|CASP2_LOTJA RecName: Full=Casparian strip membrane protein 2 gi|388502570|gb|AFK39351.1| unknown [Lotus japonicus]

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/203 (61%), Positives = 153/203 (75%), Gaps = 3/203 (1%)

Query: 10  PESKKANGSGKGKAAVG---APAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALG 66
           PES++   +G+GKA VG    PA  V +TKA P P GGWKKG+AI DF+LRL AIGAA+G
Sbjct: 16  PESRRTRSNGRGKATVGDAPPPAETVVSTKAAPLPTGGWKKGIAILDFILRLGAIGAAMG 75

Query: 67  ATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPH 126
           A+  MGT ++ILPFFTQF QF AQ+DDF VF  FV+ N L   +L+LSLP SI+CIVRP 
Sbjct: 76  ASILMGTNEQILPFFTQFLQFHAQWDDFPVFKLFVVLNALAGGFLILSLPLSIVCIVRPL 135

Query: 127 AVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAV 186
           AVGPR LLLI D V MA  I AA+AAA++VY+AH+G+ +ANW+ ICQQF DFCQ TS AV
Sbjct: 136 AVGPRFLLLITDLVNMATVIAAASAAAAIVYVAHNGSQDANWIAICQQFTDFCQGTSEAV 195

Query: 187 VASLIAAALLLILIVLSAFALRR 209
           V S +AA  L+ LIV+S  AL+R
Sbjct: 196 VVSFVAAVFLVCLIVVSTLALKR 218

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464888|ref|XP_002273638.1| PREDICTED: casparian strip membrane protein VIT_06s0080g00840 [Vitis vinifera] gi|226713612|sp|A7QF77.1|CASP1_VITVI RecName: Full=Casparian strip membrane protein VIT_06s0080g00840 gi|296084880|emb|CBI28289.3| unnamed protein product [Vitis vinifera]

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 161/208 (77%), Gaps = 12/208 (5%)

Query: 3   SAHAIDMPESKKANGSGKGKAAVGAPAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIG 62
            A AI++ E+K A+            A  VATTKA  HP+ G K+G+AIFDF+LRL+AIG
Sbjct: 6   EATAINIGETKSAS------------ATTVATTKAIQHPKAGLKRGLAIFDFILRLSAIG 53

Query: 63  AALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCI 122
           AAL AT TMGT D+ LPFFTQFFQF+A YDD   F FFVIAN + S YL LSLPFSI+CI
Sbjct: 54  AALAATTTMGTTDQTLPFFTQFFQFQASYDDLPAFSFFVIANAIASGYLFLSLPFSIVCI 113

Query: 123 VRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQST 182
           VRPHA+G RLLL+I DTVM+ALTI AAAAAA++VYLAH+GN NANW+ ICQQF DFCQS 
Sbjct: 114 VRPHAMGARLLLVICDTVMVALTIAAAAAAAAIVYLAHNGNSNANWVAICQQFDDFCQSV 173

Query: 183 SSAVVASLIAAALLLILIVLSAFALRRR 210
           S AVVAS IAA L +++IVLSAF+LR+ 
Sbjct: 174 SGAVVASFIAAVLFMLMIVLSAFSLRKH 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|339515837|gb|AEJ82303.1| casparian strip protein 3 [Cloning vector pScarecrow::CASP3:mCherry]

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 118/198 (59%), Positives = 141/198 (71%), Gaps = 4/198 (2%)

Query: 18  SGKGKAAVGAPAAA----VATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALGATATMGT 73
            GKGKA V AP       +   K       GWK+GVAIFDFVLRL A   A+ A A M T
Sbjct: 24  KGKGKAHVFAPPMNYNRIMDKHKQEKMSPAGWKRGVAIFDFVLRLIAAITAMAAAAKMAT 83

Query: 74  ADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLL 133
            +E LPFFTQF QF+A Y D      FVI N +V  YL LSLPFSI+CI+RP AV PRL 
Sbjct: 84  TEETLPFFTQFLQFQADYTDLPTMSSFVIVNSIVGGYLTLSLPFSIVCILRPLAVPPRLF 143

Query: 134 LLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAA 193
           L++ DTVMM LT+ AA+A+A++VYLAH+GN ++NWLP+CQQFGDFCQ TS AVVAS IAA
Sbjct: 144 LILCDTVMMGLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGDFCQGTSGAVVASFIAA 203

Query: 194 ALLLILIVLSAFALRRRT 211
            LL+ L++LSAFAL+R T
Sbjct: 204 TLLMFLVILSAFALKRTT 221

Source: Cloning vector pScarecrow::CASP3:mCherry

Species: Cloning vector pScarecrow::CASP3:mCherry

Genus: N/A

Family: N/A

Order: N/A

Class: N/A

Phylum: N/A

>gi|15225873|ref|NP_180305.1| uncharacterized protein [Arabidopsis thaliana] gi|75216242|sp|Q9ZQI2.1|CASP3_ARATH RecName: Full=Casparian strip membrane protein 3 gi|5306261|gb|AAD41993.1| unknown protein [Arabidopsis thaliana] gi|20197657|gb|AAM15182.1| unknown protein [Arabidopsis thaliana] gi|27765014|gb|AAO23628.1| At2g27370 [Arabidopsis thaliana] gi|110743400|dbj|BAE99586.1| hypothetical protein [Arabidopsis thaliana] gi|330252892|gb|AEC07986.1| uncharacterized protein [Arabidopsis thaliana] gi|339515802|gb|AEJ82279.1| casparian strip protein 3 [Cloning vector pCASP3::CASP3:GFP] gi|339515817|gb|AEJ82289.1| casparian strip protein 3 [Cloning vector p35S::CASP3:GFP]

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/214 (56%), Positives = 146/214 (68%), Gaps = 8/214 (3%)

Query: 2   ESAHAIDMPESKKANGSGKGKAAVGAPAAA----VATTKATPHPRGGWKKGVAIFDFVLR 57
           E    +  P+  K    GKGKA V AP       +   K       GWK+GVAIFDFVLR
Sbjct: 12  EEEPIVQRPKLDK----GKGKAHVFAPPMNYNRIMDKHKQEKMSPAGWKRGVAIFDFVLR 67

Query: 58  LAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPF 117
           L A   A+ A A M T +E LPFFTQF QF+A Y D      FVI N +V  YL LSLPF
Sbjct: 68  LIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIVNSIVGGYLTLSLPF 127

Query: 118 SILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGD 177
           SI+CI+RP AV PRL L++ DTVMM LT+ AA+A+A++VYLAH+GN ++NWLP+CQQFGD
Sbjct: 128 SIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGNSSSNWLPVCQQFGD 187

Query: 178 FCQSTSSAVVASLIAAALLLILIVLSAFALRRRT 211
           FCQ TS AVVAS IAA LL+ L++LSAFAL+R T
Sbjct: 188 FCQGTSGAVVASFIAATLLMFLVILSAFALKRTT 221

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579373|ref|XP_002530531.1| conserved hypothetical protein [Ricinus communis] gi|288559168|sp|B9SX12.1|CASP3_RICCO RecName: Full=Casparian strip membrane protein RCOM_1259250 gi|223529935|gb|EEF31863.1| conserved hypothetical protein [Ricinus communis]

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/204 (58%), Positives = 148/204 (72%), Gaps = 8/204 (3%)

Query: 7   IDMPESKKANGSGKGKAAVGAPAAAVATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALG 66
           I++P    A   GK        A  +  + ++   +GG+KKG+AIFDF+LRL A+ +AL 
Sbjct: 5   IEIPAESSAVAKGK--------APLIGASSSSYEKKGGYKKGIAIFDFILRLGAVISALS 56

Query: 67  ATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPH 126
           A ATMGT+DE LPFFTQFFQFEA YDDF  F FFVIA G V  YLVLSLPFS++ I+RPH
Sbjct: 57  AAATMGTSDETLPFFTQFFQFEAGYDDFPTFQFFVIAMGFVGGYLVLSLPFSVVAIIRPH 116

Query: 127 AVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAV 186
           AVG RLLLLI DTV + L   AAAAAA++VYLAH+GN +ANWL +CQQFGDFCQ  S  V
Sbjct: 117 AVGIRLLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVCQQFGDFCQKVSGGV 176

Query: 187 VASLIAAALLLILIVLSAFALRRR 210
           VAS ++  + L+L+V+SA ALR+ 
Sbjct: 177 VASFVSVLVFLLLVVMSAVALRKH 200

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453139|ref|XP_003596846.1| hypothetical protein MTR_2g086740 [Medicago truncatula] gi|391738015|sp|G7IHF9.1|CASP1_MEDTR RecName: Full=Casparian strip membrane protein MTR_2g086740 gi|355485894|gb|AES67097.1| hypothetical protein MTR_2g086740 [Medicago truncatula]

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/213 (59%), Positives = 161/213 (75%), Gaps = 4/213 (1%)

Query: 1   MESAHAIDMPESKKANGSGKGKAAVG--AP--AAAVATTKATPHPRGGWKKGVAIFDFVL 56
           +E +    + ESK+   +GKGK+  G  +P  AA V TTKATP  +GG KKG+AI DF+L
Sbjct: 7   VEESSTAPILESKRTRSNGKGKSIDGDHSPPHAATVVTTKATPLQKGGMKKGIAILDFIL 66

Query: 57  RLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLP 116
           RL AIGAALGA   MGT ++ILPFFTQF QF AQ+DDF +F FFV+ANG  + +L+LSLP
Sbjct: 67  RLGAIGAALGAAVIMGTNEQILPFFTQFLQFHAQWDDFPMFKFFVVANGAAAGFLILSLP 126

Query: 117 FSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFG 176
           FSI+CIVRP A GPR LL+I D V+MAL + AA++AA+VVYLAH+G+ +ANW  ICQQF 
Sbjct: 127 FSIVCIVRPLAAGPRFLLVIVDLVLMALVVAAASSAAAVVYLAHNGSQDANWNAICQQFT 186

Query: 177 DFCQSTSSAVVASLIAAALLLILIVLSAFALRR 209
           DFCQ +S AVVAS +A+  L  L+V+S+ AL+R
Sbjct: 187 DFCQGSSLAVVASFVASVFLACLVVVSSVALKR 219

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574032|ref|XP_003555157.1| PREDICTED: casparian strip membrane protein 5-like [Glycine max]

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 113/199 (56%), Positives = 141/199 (70%), Gaps = 6/199 (3%)

Query: 14  KANGSGKGKAAVGAPAAA----VATTKATPHPRGGWKKGVAIFDFVLRLAAIGAALGATA 69
           K  G  KGK    A + +     ++TKA P  R  WKKG+A+ DFVLRL AIGAA+G+  
Sbjct: 14  KNKGIDKGKGVTWAVSVSEKDSFSSTKAAPFSR--WKKGIAVTDFVLRLGAIGAAMGSAV 71

Query: 70  TMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVG 129
           TMGT +E LPFFTQF QF AQ+ DF VF FFV ANG++S Y +LSLPFS +CIV+PHAV 
Sbjct: 72  TMGTNEEQLPFFTQFLQFHAQWSDFPVFQFFVFANGVISGYAILSLPFSYVCIVQPHAVR 131

Query: 130 PRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVAS 189
           PRLLL+  DTVMM L   AAA AA++VY+ H+G+ +ANW+  CQ F +FCQ+ S AVV S
Sbjct: 132 PRLLLMTFDTVMMGLISVAAAGAAAIVYVGHNGSQDANWMAFCQGFTNFCQAASEAVVLS 191

Query: 190 LIAAALLLILIVLSAFALR 208
            +AAA  L L+ LSA AL+
Sbjct: 192 FVAAAFFLCLVPLSALALK 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	211
TAIR|locus:2160747	202	CASP4 "AT5G06200" [Arabidopsis	0.663	0.693	0.557	8.7e-40
TAIR|locus:2038638	221	CASP3 "AT2G27370" [Arabidopsis	0.658	0.628	0.546	3.7e-39
TAIR|locus:2053514	206	CASP1 "AT2G36100" [Arabidopsis	0.663	0.679	0.55	7.8e-39
TAIR|locus:2080742	204	CASP2 "AT3G11550" [Arabidopsis	0.663	0.686	0.542	8.9e-38
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.654	0.737	0.384	1.6e-24
TAIR|locus:2035791	209	AT1G14160 "AT1G14160" [Arabido	0.635	0.641	0.388	7e-22
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.402	0.518	0.358	2.9e-09
TAIR|locus:2091045	178	AT3G14380 "AT3G14380" [Arabido	0.421	0.5	0.336	2e-08
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.431	0.561	0.32	3.3e-08
UNIPROTKB|Q84UT5	162	BLE3 "CASP-like protein BLE3"	0.431	0.561	0.32	3.3e-08

TAIR|locus:2160747 CASP4 "AT5G06200" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 78/140 (55%), Positives = 93/140 (66%)

Query:    43 GGWKKGVAIFDFVXXXXXXXXXXXXXXXXXXXDEILPFFTQFFQFEAQYDDFEVFMFFVI 102
             GG+K+G++IFDF+                   DE LPFFTQF QFEA YDD   F FFV+
Sbjct:    35 GGYKRGLSIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVV 94

Query:   103 ANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGXXXXXXSVVYLAHSG 162
             A  +V+ YLVLSLPFS++ IVRP AV PRLLLL+ DT  +AL         ++VYLAH+G
Sbjct:    95 AIAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNG 154

Query:   163 NPNANWLPICQQFGDFCQST 182
             N N NWLPICQQFGDFCQ T
Sbjct:   155 NTNTNWLPICQQFGDFCQKT 174

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2038638 CASP3 "AT2G27370" [Arabidopsis thaliana (taxid:3702)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 76/139 (54%), Positives = 91/139 (65%)

Query:    44 GWKKGVAIFDFVXXXXXXXXXXXXXXXXXXXDEILPFFTQFFQFEAQYDDFEVFMFFVIA 103
             GWK+GVAIFDFV                   +E LPFFTQF QF+A Y D      FVI 
Sbjct:    54 GWKRGVAIFDFVLRLIAAITAMAAAAKMATTEETLPFFTQFLQFQADYTDLPTMSSFVIV 113

Query:   104 NGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGXXXXXXSVVYLAHSGN 163
             N +V  YL LSLPFSI+CI+RP AV PRL L++ DTVMM LT+       ++VYLAH+GN
Sbjct:   114 NSIVGGYLTLSLPFSIVCILRPLAVPPRLFLILCDTVMMGLTLMAASASAAIVYLAHNGN 173

Query:   164 PNANWLPICQQFGDFCQST 182
              ++NWLP+CQQFGDFCQ T
Sbjct:   174 SSSNWLPVCQQFGDFCQGT 192

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2053514 CASP1 "AT2G36100" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 77/140 (55%), Positives = 95/140 (67%)

Query:    42 RGGWKKGVAIFDFVXXXXXXXXXXXXXXXXXXXDEILPFFTQFFQFEAQYDDFEVFMFFV 101
             RGG K+G+AIFDF+                   +E LPFFTQF QF+A YDD   F +FV
Sbjct:    38 RGGAKRGLAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQAGYDDLPAFQYFV 97

Query:   102 IANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGXXXXXXSVVYLAHS 161
             IA  +V++YLVLSLPFSI+ IVRPHAV PRL+LLI DT+++ L         S+ YLAH+
Sbjct:    98 IAVAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAAAAASITYLAHN 157

Query:   162 GNPNANWLPICQQFGDFCQS 181
             GN + NWLPICQQFGDFCQ+
Sbjct:   158 GNQSTNWLPICQQFGDFCQN 177

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2080742 CASP2 "AT3G11550" [Arabidopsis thaliana (taxid:3702)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 76/140 (54%), Positives = 89/140 (63%)

Query:    43 GGWKKGVAIFDFVXXXXXXXXXXXXXXXXXXXDEILPFFTQFFQFEAQYDDFEVFMFFVI 102
             GG+ +G+AIFDF+                   DE LPFFTQF QFEA YDD   F FFVI
Sbjct:    37 GGYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFTQFLQFEASYDDLPTFQFFVI 96

Query:   103 ANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGXXXXXXSVVYLAHSG 162
             A  LV  YLVLSLP S++ I+RP A  PRLLLL+ DT ++AL         ++ YLAHSG
Sbjct:    97 AMALVGGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVLALNTAAASSAAAISYLAHSG 156

Query:   163 NPNANWLPICQQFGDFCQST 182
             N N NWLPICQQFGDFCQ +
Sbjct:   157 NQNTNWLPICQQFGDFCQKS 176

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 53/138 (38%), Positives = 74/138 (53%)

Query:    43 GGWKKGVAIFDFVXXXXXXXXXXXXXXXXXXXDEILPFFTQFFQFEAQYDDFEVFMFFVI 102
             G   + +AI +F+                    E LPFFTQF +F+A+Y+D     FFV+
Sbjct:    19 GLMSRRIAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVV 78

Query:   103 ANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGXXXXXXSVVYLAHSG 162
             AN +VS YL+LSL  + + IV+      R+LL+I D  M+ L         ++VYLAH+G
Sbjct:    79 ANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHNG 138

Query:   163 NPNANWLPICQQFGDFCQ 180
             N   NW  ICQQF  FC+
Sbjct:   139 NNKTNWFAICQQFNSFCE 156

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2035791 AT1G14160 "AT1G14160" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 52/134 (38%), Positives = 67/134 (50%)

Query:    47 KGVAIFDFVXXXXXXXXXXXXXXXXXXXDEILPFFTQFFQFEAQYDDFEVFMFFVIANGL 106
             KG+++  FV                    E +   +Q    + +Y D    MFFV+AN +
Sbjct:    46 KGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLSQLVLLKVKYSDLPTLMFFVVANAI 105

Query:   107 VSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGXXXXXXSVVYLAHSGNPNA 166
                YLVLSLP SI  I    A   R++LL+ DTVM+AL         + VYLAH GN  A
Sbjct:   106 SGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLALVSSGASAATATVYLAHEGNTTA 165

Query:   167 NWLPICQQFGDFCQ 180
             NW PICQQF  FC+
Sbjct:   166 NWPPICQQFDGFCE 179

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 33/92 (35%), Positives = 45/92 (48%)

Query:    88 EAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIG 147
             EA+Y D   F +FVIAN +VS Y      F +L + +   +   +++L  D VM  L   
Sbjct:    43 EAKYTDMAAFKYFVIANAVVSVY-----SFLVLFLPKESLLWKFVVVL--DLVMTMLLTS 95

Query:   148 XXXXXXSVVYLAHSGNPNANWLPICQQFGDFC 179
                   +V  +   GN NA WLPIC Q   FC
Sbjct:    96 SLSAALAVAQVGKKGNANAGWLPICGQVPKFC 127

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2091045 AT3G14380 "AT3G14380" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 31/92 (33%), Positives = 46/92 (50%)

Query:    91 YDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHA-VGPRLLLLIGDTVMMALTIGXX 149
             Y +   FM+ V ANG+ +AY +LS   +IL +  P + V  R L L+ D V+  + +   
Sbjct:    56 YSNIGAFMYLVSANGVCAAYSLLSA-LAILALPCPISKVQVRTLFLL-DQVVTYVVLAAG 113

Query:   150 XXXXSVVYLAHSGNPNANWLPICQQFGDFCQS 181
                   VYLA+ GN    W   C  +G FC +
Sbjct:   114 AVSAETVYLAYYGNIPITWSSACDSYGSFCHN 145

GO:0016020 "membrane" evidence=ISS

GO:0010227 "floral organ abscission" evidence=IEP

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 32/100 (32%), Positives = 48/100 (48%)

Query:    82 TQFF--QFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDT 139
             T FF  Q EA+Y     F+FFV+A  + +AY       S+L +  P       L L  D 
Sbjct:    34 TSFFGIQMEAKYSYTPSFIFFVVAYAVAAAY-------SLLVLAVPAGSALSRLALTTDV 86

Query:   140 VMMALTIGXXXXXXSVVYLAHSGNPNANWLPICQQFGDFC 179
             V+  +  G      ++  +A +GN +A WLP+C Q   +C
Sbjct:    87 VLGMVLAGAVASAGAISDIAKNGNSHAGWLPVCGQIHAYC 126

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

UNIPROTKB|Q84UT5 BLE3 "CASP-like protein BLE3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 32/100 (32%), Positives = 48/100 (48%)

Query:    82 TQFF--QFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLLLLIGDT 139
             T FF  Q EA+Y     F+FFV+A  + +AY       S+L +  P       L L  D 
Sbjct:    34 TSFFGIQMEAKYSYTPSFIFFVVAYAVAAAY-------SLLVLAVPAGSALSRLALTTDV 86

Query:   140 VMMALTIGXXXXXXSVVYLAHSGNPNANWLPICQQFGDFC 179
             V+  +  G      ++  +A +GN +A WLP+C Q   +C
Sbjct:    87 VLGMVLAGAVASAGAISDIAKNGNSHAGWLPVCGQIHAYC 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0035264 "multicellular organism growth" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0DI32	CASP_TARKO	No assigned EC number	0.5700	0.9573	0.9758	N/A	no
P0DI30	CASP1_TRIPD	No assigned EC number	0.6	0.9526	0.9663	N/A	no
P0DI31	CASP2_TRIPD	No assigned EC number	0.5117	0.9431	0.9851	N/A	no
P0DI39	CASP1_VIGUN	No assigned EC number	0.5980	0.9004	0.9793	N/A	no
Q9ZQI2	CASP3_ARATH	No assigned EC number	0.5654	0.9763	0.9321	yes	no
P0DI50	CASP_TOBAC	No assigned EC number	0.5801	0.9763	0.9856	N/A	no
P0DI53	CASP3_MIMGU	No assigned EC number	0.6292	0.9336	0.9516	N/A	no
P0DI55	CASP1_LOTJA	No assigned EC number	0.5666	0.9336	1.0	N/A	no
P0DI56	CASP2_LOTJA	No assigned EC number	0.6157	0.9478	0.9132	N/A	no
P0DI57	CASP3_LOTJA	No assigned EC number	0.5804	0.9146	0.9796	N/A	no
D7LZ50	CASP4_ARALL	No assigned EC number	0.5735	0.9241	0.9653	N/A	no
D7LAP2	CASP2_ARALL	No assigned EC number	0.5550	0.9573	0.9901	N/A	no
D7LIN7	CASP1_ARALL	No assigned EC number	0.5736	0.8672	0.9014	N/A	no
B9HQ42	CASP3_POPTR	No assigned EC number	0.6030	0.9383	0.8148	yes	no
Q1W3A5	CASP1_STRAF	No assigned EC number	0.5329	0.8151	0.9100	N/A	no
P0DI41	CASP3_VIGUN	No assigned EC number	0.6105	0.9763	0.9196	N/A	no
P0DI40	CASP2_VIGUN	No assigned EC number	0.5756	0.8862	0.9739	N/A	no
A7QF77	CASP1_VITVI	No assigned EC number	0.6538	0.9289	0.9751	yes	no
P0DI48	CASP4_RAPSA	No assigned EC number	0.5326	0.8341	0.8585	N/A	no
C6T4E0	CASP5_SOYBN	No assigned EC number	0.6333	0.9857	0.9541	yes	no
B9HBX2	CASP4_POPTR	No assigned EC number	0.6267	0.9289	0.9849	yes	no
P0DI61	CASP_CUCME	No assigned EC number	0.5585	0.8341	0.8421	N/A	no
P0DI60	CSPL_HELAN	No assigned EC number	0.5424	0.9668	0.9622	N/A	no
P0DI63	CASP_STRHE	No assigned EC number	0.5480	0.9383	0.9801	N/A	no
P0DI62	CASP_CYNSC	No assigned EC number	0.5566	0.9383	0.9565	N/A	no
B9SX13	CASP2_RICCO	No assigned EC number	0.5833	0.9099	0.96	N/A	no
B9SX12	CASP3_RICCO	No assigned EC number	0.5833	0.9289	0.98	N/A	no
G7IHF9	CASP1_MEDTR	No assigned EC number	0.5915	0.9905	0.95	N/A	no
Q6Z1Y7	CSPL1_ORYSJ	No assigned EC number	0.5238	0.7962	0.7088	yes	no
D7LGW9	CASP3_ARALL	No assigned EC number	0.5654	0.9763	0.9321	N/A	no
B9SCX0	CASP1_RICCO	No assigned EC number	0.6585	0.9668	0.9488	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037312001 SubName- Full=Chromosome undetermined scaffold_87, whole genome shotgun sequence; (201 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	211
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	2e-40
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	2e-38

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  134 bits (340), Expect = 2e-40
 Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 4/152 (2%)

Query: 46  KKGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANG 105
            + + + + VLRLAA   AL A   MGT  +  PFF  F Q +A + D   F + V+AN 
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFF--FIQKKASFSDLPAFRYLVVANA 58

Query: 106 LVSAYLVLSLPFSILCIVR--PHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGN 163
           + + Y +L L  S+  + R  P   G   LL I D VM  L + AA+AAA++VYLA +GN
Sbjct: 59  IAAGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGN 118

Query: 164 PNANWLPICQQFGDFCQSTSSAVVASLIAAAL 195
            +ANW+ IC QFG FC   +++V  S +A  L
Sbjct: 119 SHANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score =  129 bits (327), Expect = 2e-38
 Identities = 58/154 (37%), Positives = 83/154 (53%)

Query: 54  FVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVL 113
            +LR+ A  A L A   MGT  E    F Q   F+A++ D   F++FV+AN +   Y +L
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLL 60

Query: 114 SLPFSILCIVRPHAVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQ 173
           SL  SI  +++       + L   D VM+AL     +AAA+V Y+   GN  A WL IC 
Sbjct: 61  SLVVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICG 120

Query: 174 QFGDFCQSTSSAVVASLIAAALLLILIVLSAFAL 207
            FG FC   + ++  SL A  LL++L +LSA +L
Sbjct: 121 VFGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	211
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.6

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=5.6e-46  Score=303.31  Aligned_cols=154  Identities=38%  Similarity=0.653  Sum_probs=147.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccccccccccceeeeeeecchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhh
Q 042128           54 FVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVGPRLL  133 (211)
Q Consensus        54 l~LRl~a~~~slaA~~vM~T~~qt~~~~~~~~~~~a~f~d~~af~ylv~an~I~~~Ysllql~~s~~~i~~~~~~~~~~l  133 (211)
                      ++||+++++++++|+++|+||+|+.++++|.++++++|+|+++|+|+|++|+|+|+|+++|++++++++.+++...++|+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~~~~~   80 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFFKLIA   80 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence            47999999999999999999999998877667889999999999999999999999999999999988877776666899


Q ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccchhchhhhhHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 042128          134 LLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIVLSAFAL  207 (211)
Q Consensus       134 ~f~~Dqv~ayLl~SaasAA~ai~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~~~~~llsvlSa~~L  207 (211)
                      +|++||+++||++||++||++++|++|+||+|.+|+++|+++++||||+.+|++++|+|++++++++++|+++|
T Consensus        81 ~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        81 LFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999985

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=4.3e-39  Score=260.28  Aligned_cols=147  Identities=35%  Similarity=0.585  Sum_probs=136.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhccccccccccceeeeeeecchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 042128           47 KGVAIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPH  126 (211)
Q Consensus        47 r~l~~~~l~LRl~a~~~slaA~~vM~T~~qt~~~~~~~~~~~a~f~d~~af~ylv~an~I~~~Ysllql~~s~~~i~~~~  126 (211)
                      |+.+..+++||+++++++++|+++|++|+|+.++..  .+.+++|+|+++|+|+|++|+|+|+|+++|++.+++.+.+++
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~--~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~   78 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFS--IQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGK   78 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeec--cccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            467899999999999999999999999999987763  678999999999999999999999999999999999887654


Q ss_pred             --CCcchhhHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccchhchhhhhHHHHHHHHHHHHHH
Q 042128          127 --AVGPRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAAL  195 (211)
Q Consensus       127 --~~~~~~l~f~~Dqv~ayLl~SaasAA~ai~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~~~  195 (211)
                        .....|++|++||+++||++||++||++++|++++||++.+|+++|+++++||+|+.+|++++|+|+++
T Consensus        79 ~~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   79 LRSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             CcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence              223568999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.60  E-value=1.8e-06  Score=67.47  Aligned_cols=141  Identities=15%  Similarity=0.034  Sum_probs=98.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhccccccccccceeeeeeecchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 042128           50 AIFDFVLRLAAIGAALGATATMGTADEILPFFTQFFQFEAQYDDFEVFMFFVIANGLVSAYLVLSLPFSILCIVRPHAVG  129 (211)
Q Consensus        50 ~~~~l~LRl~a~~~slaA~~vM~T~~qt~~~~~~~~~~~a~f~d~~af~ylv~an~I~~~Ysllql~~s~~~i~~~~~~~  129 (211)
                      +....+||+++++++++.+.+++....+..        .......++..|.+.+.++...|++..+...++.........
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~   74 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS--------QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSLKYRPRIP   74 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc--------cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            345689999999999999999998664221        123455567889999999999998888877665411222334


Q ss_pred             chhhHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcccccchhchhhhhHHHHHHHHHHHHHHHHHHHH
Q 042128          130 PRLLLLIGDTVMMALTIGAAAAAASVVYLAHSGNPNANWLPICQQFGDFCQSTSSAVVASLIAAALLLILIV  201 (211)
Q Consensus       130 ~~~l~f~~Dqv~ayLl~SaasAA~ai~~l~~~G~~~~~W~~vC~~~~~FC~~~~~Si~lsflA~~~~~llsv  201 (211)
                      +.+..++.|.+++.+-+.+...-+.-..-.+.+++   +...+...++-|+...++.+++|++++++..+.+
T Consensus        75 ~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   75 WPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            55688999999999988876644332211111111   2333445567899999999999999999987765

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00