Citrus Sinensis ID: 042169

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHLL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHccccEEEEcccHHHHHHcccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccEEEEcccEEEcccccHHHHcccccccccccccccccccEEEEccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccEEEcccccEEccccccccccccccccHHHHHHHHHHHHHHcccEEEEEcc
Secondary Structure Prediction (SSPRO)
cHHHHHHcccccEcccccccHHHHHHHHHHHccccEEEEEEEEcccHHHccHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHccccEEEEccHHHHHccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccEEEcccEEEEEcccccccEEEEEcccccccccEEEccEEEEEccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccEEEccccccccccHHHHHHHcccccccHHHHHHHHHEEHEccccccEEcc
Coil and Loop (DISEMBL)
mewfrkklpdlevlkstnlsrSFHDRVVKFSKNQCATQFFMIwfspartfgprdfLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRgfkiltvtpdlpslvkdtpAEAWLKKikngkidpgknplsihlSDLIRLAVLYKYggvyldtdFVILKDFKGLrnaigaqgvdQVTHKWTTlngaamvfdkrhpILFDFLQEftttfdgskwghngpyLLTRVIQRvgntpgynltilglkafypvnwiqingfykkpvseeeSKWVEETVLELNKetyglhll
Flexible Loop (DISEMBL)
mewfrkklpdlevlkstnlsrsfHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLIsrsldtrrGYKILKplldrgfkiltvtpdlpslvkdtPAEAWLKKikngkidpgknplSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIgaqgvdqvTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVlelnketyglhll
Low Complexity Region (SEG)
MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHLL
Disordered region (IsUnstruct)
***********EVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETY*****
Disordered Region (DISOPRED)
*EWFR*KLPDL*******************S*NQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHLL
Disordered Region (DISEMBL)
MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHLL
Disordered Region (DISPRO)
MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHLL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHLL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
P0C8Q4	644	Uncharacterized protein A	no	no	0.839	0.372	0.337	2e-32
Q67BJ4	359	Lactosylceramide 4-alpha-	yes	no	0.762	0.607	0.327	3e-26
Q9JI93	360	Lactosylceramide 4-alpha-	yes	no	0.762	0.605	0.323	2e-25
Q9NPC4	353	Lactosylceramide 4-alpha-	yes	no	0.737	0.597	0.301	1e-22
Q9N291	353	Lactosylceramide 4-alpha-	yes	no	0.737	0.597	0.301	2e-22
Q9N289	218	Lactosylceramide 4-alpha-	N/A	no	0.594	0.779	0.331	3e-22
Q9N290	327	Lactosylceramide 4-alpha-	N/A	no	0.720	0.629	0.292	3e-21
Q9UNA3	340	Alpha-1,4-N-acetylglucosa	no	no	0.506	0.426	0.295	2e-13

>sp|P0C8Q4|Y4990_ARATH Uncharacterized protein At4g19900 OS=Arabidopsis thaliana GN=At4g19900 PE=2 SV=1

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 133/267 (49%), Gaps = 27/267 (10%)

Query: 30  FSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS--LDTRRGYKILK 87
           F K +C+ + FM+W SP   F  R    +++L+  +  +C+V+ S +  LD  R      
Sbjct: 363 FRKEKCSMRVFMVWNSPGWMFSVRHQRGLESLLSQHRDACVVVFSETVELDFFRN----- 417

Query: 88  PLLDRGFKILTVTPDLPSLVKDTP----AEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAV 143
             +   +K+    P+L  L++DTP    A  W    K  K  P       H S+L+RLA 
Sbjct: 418 SFVKDSYKVAVAMPNLDELLQDTPTHVFASVWFDWRKT-KFYP------THYSELVRLAA 470

Query: 144 LYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQ 203
           LYKYGGVYLD+D ++L     LRN IG +  DQV  +  +LNGA M F+K+ P L + L 
Sbjct: 471 LYKYGGVYLDSDVIVLGSLSSLRNTIGME--DQVAGE--SLNGAVMSFEKKSPFLLECLN 526

Query: 204 EFTTTFDGSKWGHNGPYLLTRVIQRVGNTPG-----YNLTILGLKAFYPVNWIQINGFYK 258
           E+  T+D      NG  LLTRV +R  N          L I     F+P+N  QI  ++ 
Sbjct: 527 EYYLTYDDKCLRCNGADLLTRVAKRFLNGKNRRMNQQELNIRPSSVFFPINSQQITNYFA 586

Query: 259 KPVSEEESKWVEETVLELNKETYGLHL 285
            P  E+E    +E+  ++  E+   H 
Sbjct: 587 YPAIEDERSQQDESFKKILNESLTFHF 613

Arabidopsis thaliana (taxid: 3702)

>sp|Q67BJ4|A4GAT_MOUSE Lactosylceramide 4-alpha-galactosyltransferase OS=Mus musculus GN=A4galt PE=2 SV=1

 Score =  119 bits (297), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 23/241 (9%)

Query: 57  AVDTLMKANPQSCLVLISRSL--DTRRGYKILKPLLDRGFKILTVTP-DLPSLVKDTPAE 113
           +V++  +A+P+S +V++ + L  DT    + L   L   F  + + P DL  L +DTP  
Sbjct: 103 SVESAARAHPESQVVVLMKGLPRDTTAQPRNLGISLLSCFPNVWIRPLDLQELFEDTPLA 162

Query: 114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQG 173
           AW  + ++ + +P + P+   LSD  R+A+L+K+GG+YLDTDF++LK+   L N +G Q 
Sbjct: 163 AWYSEARH-RWEPYQLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLLNLTNTLGIQS 218

Query: 174 VDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTP 233
                     LNGA + F+++H  L   L +F   ++G  WGH GP LLTRV ++  +  
Sbjct: 219 R-------YVLNGAFLAFERKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFKKWCSIQ 271

Query: 234 GYN-------LTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKETYGLH 284
                     +T L  +AFYP+ W     +++    EE ++ +  T  V   NK++ G H
Sbjct: 272 SLEKSHACRGVTALPPEAFYPIPWQNWKKYFEDISPEELTQLLNATYAVHVWNKKSQGTH 331

Query: 285 L 285
           L
Sbjct: 332 L 332

Necessary for the biosynthesis of the Pk antigen of blood histogroup P. Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9JI93|A4GAT_RAT Lactosylceramide 4-alpha-galactosyltransferase OS=Rattus norvegicus GN=A4galt PE=1 SV=1

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 131/241 (54%), Gaps = 23/241 (9%)

Query: 57  AVDTLMKANPQSCLVLISRSL--DTRRGYKILKPLLDRGFKILTVTP-DLPSLVKDTPAE 113
           +V++  +A+P+S +V++ + L  DT    + L   L   F  + + P DL  L +DTP  
Sbjct: 104 SVESAARAHPESQVVVLMKGLPRDTTAWPRNLGISLLSCFPNVQIRPLDLQELFEDTPLA 163

Query: 114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQG 173
           AW  + ++ + +P   P+   LSD  R+A+L+K+GG+YLDTDF++LK+ + L N +G Q 
Sbjct: 164 AWYLEAQH-RWEPYLLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLRNLTNMLGIQS 219

Query: 174 VDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTP 233
                     LNGA + F+++H  L   +++F   ++G  WGH GP LLTRV ++  +  
Sbjct: 220 R-------YVLNGAFLAFERKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFKKWCSIH 272

Query: 234 GY-------NLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKETYGLH 284
                     +T L  +AFYP+ W     +++    EE ++ +  T  V   NK++ G H
Sbjct: 273 SLKESRACRGVTALPPEAFYPIPWQNWKKYFEDVSPEELAQLLNATYAVHVWNKKSQGTH 332

Query: 285 L 285
           L
Sbjct: 333 L 333

Necessary for the biosynthesis of the Pk antigen of blood histogroup P. Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9NPC4|A4GAT_HUMAN Lactosylceramide 4-alpha-galactosyltransferase OS=Homo sapiens GN=A4GALT PE=2 SV=1

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 31/242 (12%)

Query: 57  AVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTP-------DLPSLVKD 109
           +V++  + +P+S ++++ + L    G   L   L  G  +L+  P       DL  L +D
Sbjct: 97  SVESAARTHPESHVLVLMKGLPG--GNASLPRHL--GISLLSCFPNVQMLPLDLRELFRD 152

Query: 110 TPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAI 169
           TP   W   ++ G+ +P   P+   LSD  R+A+++K+GG+YLDTDF++LK+ + L N +
Sbjct: 153 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 208

Query: 170 GAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQR- 228
           G Q           LNGA + F++RH  +   +++F   ++G  WGH GP LLTRV ++ 
Sbjct: 209 GTQSR-------YVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKW 261

Query: 229 ------VGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKET 280
                   +     +T L  +AFYP+ W     +++    EE  + +  T  V   NK++
Sbjct: 262 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPEELPRLLSATYAVHVWNKKS 321

Query: 281 YG 282
            G
Sbjct: 322 QG 323

Necessary for the biosynthesis of the Pk antigen of blood histogroup P. Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9N291|A4GAT_PANTR Lactosylceramide 4-alpha-galactosyltransferase OS=Pan troglodytes GN=A4GALT PE=3 SV=1

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 31/242 (12%)

Query: 57  AVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTP-------DLPSLVKD 109
           +V++  + +P+S ++++ + L    G   L   L  G  +L+  P       DL  L +D
Sbjct: 97  SVESAARTHPESHVLVLMKGLPG--GNASLPRHL--GISLLSCFPNVQMLPLDLRELFQD 152

Query: 110 TPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAI 169
           TP   W   ++ G+ +P   P+   LSD  R+A+++K+GG+YLDTDF++LK+ + L N +
Sbjct: 153 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 208

Query: 170 GAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQR- 228
           G Q           LNGA + F++RH  +   +++F   ++G  WGH GP LLTRV ++ 
Sbjct: 209 GTQSR-------YVLNGAFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKW 261

Query: 229 ------VGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKET 280
                   +     +T L  +AFYP+ W     +++    EE  + +  T  V   NK++
Sbjct: 262 CSIRSLAESRSCRGVTTLPPEAFYPIPWQDWKKYFEDINPEELPRLLSATYAVHVWNKKS 321

Query: 281 YG 282
            G
Sbjct: 322 QG 323

Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9N289|A4GAT_PONPY Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Pongo pygmaeus GN=A4GALT PE=3 SV=1

 Score =  105 bits (262), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 20/190 (10%)

Query: 102 DLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKD 161
           DL  L +DTP   W   ++ G+ +P   P+   LSD  R+A+++K+GG+YLDTDF++LK+
Sbjct: 10  DLRELFRDTPLADWYTAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKN 65

Query: 162 FKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYL 221
            + L N +G Q           LNGA + F +RH  +   +++F   ++G  WGH GP L
Sbjct: 66  LRNLTNVLGTQSR-------YVLNGAFLAFQRRHEFMALCMRDFVDHYNGWIWGHQGPQL 118

Query: 222 LTRVIQR-------VGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET-- 272
           LTRV ++         +     +T L  +AFYP+ W     +++    EE  + +  T  
Sbjct: 119 LTRVFKKWCSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDISPEELPRLLNATYA 178

Query: 273 VLELNKETYG 282
           V   NK++ G
Sbjct: 179 VHVWNKKSQG 188

Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Pongo pygmaeus (taxid: 9600)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9N290|A4GAT_GORGO Lactosylceramide 4-alpha-galactosyltransferase (Fragment) OS=Gorilla gorilla gorilla GN=A4GALT PE=3 SV=1

 Score =  102 bits (254), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 37/243 (15%)

Query: 57  AVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTP-------DLPSLVKD 109
           +V++  + +P+S ++++ + L    G   L   L  G  +L+  P       DL  L +D
Sbjct: 71  SVESAARTHPESHVLVLMKGLPG--GNASLPRHL--GISLLSCFPNVQMLPLDLRELFRD 126

Query: 110 TPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAI 169
           TP   W   ++ G+ +P   P+   LSD  R+A+++K+GG+YLDTDF++LK+ + L N +
Sbjct: 127 TPLADWYAAVQ-GRWEPYLLPV---LSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVL 182

Query: 170 GAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQR- 228
           G Q           LNGA + F++ H  +   + +F   ++G  WGH GP LLTRV ++ 
Sbjct: 183 GTQSR-------YVLNGAFLAFERXHEFMALCMXDFVDHYNGWIWGHQGPQLLTRVFKKW 235

Query: 229 ------VGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYG 282
                   +     +T L  +AFYP+ W     +++    EE  +        L   TY 
Sbjct: 236 CSIRSLAESRACRGVTTLPPEAFYPIPWQDWKKYFEDINPEELPR--------LFSATYA 287

Query: 283 LHL 285
           +H+
Sbjct: 288 VHV 290

Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.

Gorilla gorilla gorilla (taxid: 9595)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 8

>sp|Q9UNA3|A4GCT_HUMAN Alpha-1,4-N-acetylglucosaminyltransferase OS=Homo sapiens GN=A4GNT PE=2 SV=1

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 21/166 (12%)

Query: 102 DLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKD 161
           D+  L++DTP  +W  +I N   +  +N L I  SD  RLA+++KYGG+Y+DTD + ++ 
Sbjct: 120 DMKRLLEDTPLFSWYNQI-NASAE--RNWLHIS-SDASRLAIIWKYGGIYMDTDVISIRP 175

Query: 162 FKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYL 221
                N + AQ     +      NG    F   HP L++ ++ F   ++ + WG+ GP L
Sbjct: 176 IPE-ENFLAAQASRYSS------NG-IFGFLPHHPFLWECMENFVEHYNSAIWGNQGPEL 227

Query: 222 LTRVI---------QRVGNTPGYNLTILGLKAFYPVNWIQINGFYK 258
           +TR++         Q V +    N++ L  + FYP+++ +   +Y+
Sbjct: 228 MTRMLRVWCKLEDFQEVSDLRCLNISFLHPQRFYPISYREWRRYYE 273

Necessary for the synthesis of type III mucin. Catalyzes the transfer of N-acetylglucosamine (GlcNAc) to core 2 branched O-glycans.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
297827369	750	predicted protein [Arabidopsis lyrata su	0.951	0.362	0.617	1e-106
3335363	736	hypothetical protein [Arabidopsis thalia	0.996	0.387	0.608	1e-103
145360743	405	lactosylceramide 4-alpha-galactosyltrans	0.996	0.703	0.608	1e-103
255581057	413	lactosylceramide 4-alpha-galactosyltrans	0.989	0.685	0.570	2e-98
449440279	414	PREDICTED: lactosylceramide 4-alpha-gala	0.996	0.688	0.538	1e-95
449483691	414	PREDICTED: lactosylceramide 4-alpha-gala	0.996	0.688	0.534	3e-95
297740224	495	unnamed protein product [Vitis vinifera]	0.996	0.575	0.540	4e-93
225440658	416	PREDICTED: uncharacterized protein At4g1	0.996	0.685	0.540	5e-93
356494971	420	PREDICTED: uncharacterized protein At4g1	0.996	0.678	0.533	2e-92
356523288	392	PREDICTED: uncharacterized protein At4g1	0.996	0.727	0.543	8e-92

>gi|297827369|ref|XP_002881567.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297327406|gb|EFH57826.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 176/285 (61%), Positives = 225/285 (78%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           ++WFR+KLP+LE+LKST  ++ FH RV+    N C+ QFFMIW SPA++FGPR+ LAVDT
Sbjct: 431 IDWFRRKLPELEILKSTTKNKRFHKRVLDLYINNCSAQFFMIWLSPAKSFGPREMLAVDT 490

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           L   NP +CL ++S SLD+ RGY ILKPLLDRGF ++ VT D+P LVK+TPAEAWLK++K
Sbjct: 491 LFTTNPGACLAILSNSLDSPRGYTILKPLLDRGFNLIAVTLDIPFLVKNTPAEAWLKRLK 550

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
           +G +DPG  PL ++LSDL RLAVLYKYGGVYLDTD + L D  GLRNAIGAQ +D  T +
Sbjct: 551 SGHMDPGSIPLFMNLSDLTRLAVLYKYGGVYLDTDIIFLNDMTGLRNAIGAQSIDPGTKR 610

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTIL 240
           WT LN A MVFD  HP++ +FLQE+ TTFDG++WG+N PYL++RVI+R+GN PGYNLTI 
Sbjct: 611 WTRLNNAVMVFDIYHPLMREFLQEYATTFDGNRWGYNSPYLVSRVIKRLGNKPGYNLTIF 670

Query: 241 GLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
              AFYPVNWI+I   +KKP +  E+KWVE+TV ++NK +Y +HL
Sbjct: 671 SPDAFYPVNWIKIQKLFKKPATTREAKWVEKTVQDMNKGSYMIHL 715

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3335363|gb|AAC27164.1| hypothetical protein [Arabidopsis thaliana]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/286 (60%), Positives = 221/286 (77%), Gaps = 1/286 (0%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           ++WFR+KLP+LE+LKST  S+SFH RV+      C+ QFFMIW SPA +FGPR+ LA+DT
Sbjct: 416 IDWFRRKLPELEILKSTTKSKSFHTRVLDLYNKNCSAQFFMIWLSPANSFGPREMLAIDT 475

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           L   NP +CL ++S SLD+  GY ILKPL D+GF ++ VT D+P LVK+TPAEAWLK++K
Sbjct: 476 LFTTNPGACLAILSNSLDSPNGYTILKPLFDQGFNLIAVTIDIPFLVKNTPAEAWLKRLK 535

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
           +G +DPG  PL ++LSDL RLAVLYKYGGVYLDTD + L D  GLRNAIGAQ  D  T +
Sbjct: 536 SGNMDPGSIPLFMNLSDLTRLAVLYKYGGVYLDTDIIFLNDMTGLRNAIGAQSSDPATKR 595

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGY-NLTI 239
           WT LN A MVFD  HP++ +FLQE+ TTFDG+KWG+N PYL++RVI+R+GN PGY NLTI
Sbjct: 596 WTRLNNAVMVFDIYHPLMREFLQEYATTFDGNKWGYNSPYLVSRVIKRLGNKPGYNNLTI 655

Query: 240 LGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
               AFYPVNWI+I   +KKP +  E+KWVE+TV ++NK +Y +HL
Sbjct: 656 FSPDAFYPVNWIKIQKLFKKPATTREAKWVEKTVQDMNKGSYMIHL 701

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145360743|ref|NP_181350.2| lactosylceramide 4-alpha-galactosyltransferase [Arabidopsis thaliana] gi|330254401|gb|AEC09495.1| lactosylceramide 4-alpha-galactosyltransferase [Arabidopsis thaliana]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 174/286 (60%), Positives = 221/286 (77%), Gaps = 1/286 (0%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           ++WFR+KLP+LE+LKST  S+SFH RV+      C+ QFFMIW SPA +FGPR+ LA+DT
Sbjct: 85  IDWFRRKLPELEILKSTTKSKSFHTRVLDLYNKNCSAQFFMIWLSPANSFGPREMLAIDT 144

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           L   NP +CL ++S SLD+  GY ILKPL D+GF ++ VT D+P LVK+TPAEAWLK++K
Sbjct: 145 LFTTNPGACLAILSNSLDSPNGYTILKPLFDQGFNLIAVTIDIPFLVKNTPAEAWLKRLK 204

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
           +G +DPG  PL ++LSDL RLAVLYKYGGVYLDTD + L D  GLRNAIGAQ  D  T +
Sbjct: 205 SGNMDPGSIPLFMNLSDLTRLAVLYKYGGVYLDTDIIFLNDMTGLRNAIGAQSSDPATKR 264

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGY-NLTI 239
           WT LN A MVFD  HP++ +FLQE+ TTFDG+KWG+N PYL++RVI+R+GN PGY NLTI
Sbjct: 265 WTRLNNAVMVFDIYHPLMREFLQEYATTFDGNKWGYNSPYLVSRVIKRLGNKPGYNNLTI 324

Query: 240 LGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
               AFYPVNWI+I   +KKP +  E+KWVE+TV ++NK +Y +HL
Sbjct: 325 FSPDAFYPVNWIKIQKLFKKPATTREAKWVEKTVQDMNKGSYMIHL 370

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581057|ref|XP_002531344.1| lactosylceramide 4-alpha-galactosyltransferase, putative [Ricinus communis] gi|223529042|gb|EEF31028.1| lactosylceramide 4-alpha-galactosyltransferase, putative [Ricinus communis]

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 162/284 (57%), Positives = 219/284 (77%), Gaps = 1/284 (0%)

Query: 3   WFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLM 62
           WF++KLP LE+ KS  L+R FH RV++F   +C  QFFM W SP  +FG R+FLA+D+L 
Sbjct: 97  WFKRKLPGLEIFKSNELTRQFHSRVLEFFDQKCDVQFFMTWISPVSSFGRREFLAMDSLF 156

Query: 63  KANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNG 122
           K +P  CL+++S ++D+ +GY+ILKPL+D GFK+  VTPDL  L K+TPAE WL+++ +G
Sbjct: 157 KVHPNGCLMILSGTMDSIQGYRILKPLVDVGFKVAAVTPDLQFLFKNTPAEIWLQEMMSG 216

Query: 123 KIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWT 182
             DPG+ PLS +LS+LIRLAV+YKYGG+Y+DTDF+ LK FKGLRN+IGAQ +D V+  WT
Sbjct: 217 NKDPGEIPLSQNLSNLIRLAVIYKYGGIYIDTDFIFLKSFKGLRNSIGAQSIDAVSRNWT 276

Query: 183 TLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGY-NLTILG 241
            LN A +VFDK HP+++ F++EF  TFDG+KWGHNGPYL++RV+ RV   P Y N T+L 
Sbjct: 277 RLNNAVLVFDKNHPLMYKFIEEFAATFDGNKWGHNGPYLVSRVVARVAGRPEYNNFTVLP 336

Query: 242 LKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
            KAFYPV+W +I GF+KKP  +  S+WV+  +L+L+ ETYGLHL
Sbjct: 337 PKAFYPVDWNRIGGFFKKPEDQAASRWVKAKLLQLSGETYGLHL 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440279|ref|XP_004137912.1| PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Cucumis sativus]

 Score =  355 bits (910), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 155/288 (53%), Positives = 217/288 (75%), Gaps = 3/288 (1%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           ++WFR  LP+  +L+S NL++ FHDR+++F  ++C  QFFM W SPAR+F  R+ +A ++
Sbjct: 97  VDWFRNHLPNFRILQSNNLTQQFHDRLLEFLSHECEVQFFMTWVSPARSFRERELMAAES 156

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           + K++P+ CL +ISR+LD+ RG KILKPLLD GFKI  + PDLP L K+TP EAW  ++K
Sbjct: 157 VFKSHPRGCLTIISRTLDSERGCKILKPLLDHGFKIQAIAPDLPLLFKNTPVEAWFDEMK 216

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
           +GK DPG+ PL+ +LS+L+RLAVLYKYGGVY+DTDF++LK F GL+N+IGAQ +D VT  
Sbjct: 217 SGKKDPGQIPLAQNLSNLMRLAVLYKYGGVYIDTDFIVLKSFMGLKNSIGAQSIDPVTKN 276

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNT---PGYNL 237
           WT LN A +VFDK+HP+L  F++ F + FDGS+WGHNGP+L++RVI ++      PG+N+
Sbjct: 277 WTILNNAVLVFDKKHPLLEKFMENFASNFDGSRWGHNGPFLVSRVIAKITGARAKPGFNV 336

Query: 238 TILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
           TIL   AFYPV+WI+I   +KKP +     W +  + +LN ETYG+HL
Sbjct: 337 TILPPAAFYPVDWIKIGELFKKPGNRAVESWAKAKLDQLNNETYGIHL 384

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449483691|ref|XP_004156661.1| PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Cucumis sativus]

 Score =  354 bits (908), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 154/288 (53%), Positives = 217/288 (75%), Gaps = 3/288 (1%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           ++WFR  LP+  +L+S NL++ FHDR+++F  ++C  QFFM W SPAR+F  R+ +A ++
Sbjct: 97  VDWFRNHLPNFRILQSNNLTQQFHDRLLEFLSHECEVQFFMTWVSPARSFRERELMAAES 156

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           + K++P+ CL +ISR+LD+ RG KILKPLLD GFKI  + PDLP L K+TP EAW  ++K
Sbjct: 157 VFKSHPRGCLTIISRTLDSERGCKILKPLLDHGFKIQAIAPDLPLLFKNTPVEAWFDEMK 216

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
           +GK DPG+ PL+ +LS+L+RLAVLYKYGGVY+DTDF++LK F GL+N+IGAQ +D VT  
Sbjct: 217 SGKKDPGQIPLAQNLSNLMRLAVLYKYGGVYIDTDFIVLKSFMGLKNSIGAQSIDPVTKN 276

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNT---PGYNL 237
           WT LN A +VFDK+HP+L  F++ F + FDGS+WGHNGP+L++RVI ++      PG+N+
Sbjct: 277 WTILNNAVLVFDKKHPLLEKFMENFASNFDGSRWGHNGPFLVSRVIAKITGARAKPGFNV 336

Query: 238 TILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
           T+L   AFYPV+WI+I   +KKP +     W +  + +LN ETYG+HL
Sbjct: 337 TVLPPAAFYPVDWIKIGELFKKPGNRAVESWAKAKLDQLNNETYGIHL 384

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740224|emb|CBI30406.3| unnamed protein product [Vitis vinifera]

 Score =  347 bits (889), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 154/285 (54%), Positives = 208/285 (72%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           + WFR  LP+ E+ KST L++ F  RV  F   +C  +FFM W SPA +FG R+F+A+D+
Sbjct: 178 IAWFRTVLPEFEIFKSTRLTQQFEGRVRSFFNGKCEVRFFMTWISPAESFGRREFIAMDS 237

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           L KA+P  CL ++S +LD+R G +ILKPL DR F++L V PD   L KDTPAEAW  ++K
Sbjct: 238 LFKAHPHGCLTILSPTLDSRLGDRILKPLQDREFRVLAVAPDASFLFKDTPAEAWFVEMK 297

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
           +G  DPG+ PL+ +LS+L+RLAVLYKYGGVYLDTDF+IL  F  LRN IGAQ +D V+  
Sbjct: 298 SGNKDPGEIPLAQNLSNLLRLAVLYKYGGVYLDTDFIILNKFSSLRNTIGAQSIDPVSGN 357

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTIL 240
           W+ LN A ++FDK HP+++ F++EF  TFDG+KWGHNGPYL++RV+ RV   PGYN T+L
Sbjct: 358 WSRLNNAVLIFDKNHPLVYKFIEEFALTFDGNKWGHNGPYLVSRVVNRVARRPGYNFTVL 417

Query: 241 GLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
              AFYPV+W +I  ++ +P  +  SKW+E  +L+L KE YG+HL
Sbjct: 418 PPMAFYPVDWNRIGDYFPRPKDQVTSKWLETKLLQLGKEAYGVHL 462

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440658|ref|XP_002274455.1| PREDICTED: uncharacterized protein At4g19900-like [Vitis vinifera]

 Score =  346 bits (888), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 154/285 (54%), Positives = 208/285 (72%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           + WFR  LP+ E+ KST L++ F  RV  F   +C  +FFM W SPA +FG R+F+A+D+
Sbjct: 99  IAWFRTVLPEFEIFKSTRLTQQFEGRVRSFFNGKCEVRFFMTWISPAESFGRREFIAMDS 158

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           L KA+P  CL ++S +LD+R G +ILKPL DR F++L V PD   L KDTPAEAW  ++K
Sbjct: 159 LFKAHPHGCLTILSPTLDSRLGDRILKPLQDREFRVLAVAPDASFLFKDTPAEAWFVEMK 218

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
           +G  DPG+ PL+ +LS+L+RLAVLYKYGGVYLDTDF+IL  F  LRN IGAQ +D V+  
Sbjct: 219 SGNKDPGEIPLAQNLSNLLRLAVLYKYGGVYLDTDFIILNKFSSLRNTIGAQSIDPVSGN 278

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTIL 240
           W+ LN A ++FDK HP+++ F++EF  TFDG+KWGHNGPYL++RV+ RV   PGYN T+L
Sbjct: 279 WSRLNNAVLIFDKNHPLVYKFIEEFALTFDGNKWGHNGPYLVSRVVNRVARRPGYNFTVL 338

Query: 241 GLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
              AFYPV+W +I  ++ +P  +  SKW+E  +L+L KE YG+HL
Sbjct: 339 PPMAFYPVDWNRIGDYFPRPKDQVTSKWLETKLLQLGKEAYGVHL 383

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356494971|ref|XP_003516354.1| PREDICTED: uncharacterized protein At4g19900-like [Glycine max]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 152/285 (53%), Positives = 214/285 (75%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           + W + +L + ++ KS NL+R F+ RV+ F   +C  QFFM W SPA  FG R+ L+V++
Sbjct: 98  IAWLQGQLHNFKIFKSNNLTRQFNARVLGFLGRKCEVQFFMTWISPASLFGGRELLSVES 157

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           + K +P++CL+++SR+LD+R GY+ILKPLLDRGFK+    PDL  LVK TP EAW ++++
Sbjct: 158 IFKNHPKACLIILSRTLDSRHGYRILKPLLDRGFKVQATAPDLSFLVKGTPVEAWFRELR 217

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
            G+ DPG+ PLS +LS+LIRLAVLYKYGG+Y+DTDF++LK   GLRN+IGAQ ++  +  
Sbjct: 218 KGRKDPGEIPLSQNLSNLIRLAVLYKYGGIYIDTDFIVLKPLTGLRNSIGAQSMNLDSKH 277

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTIL 240
           WT LN A ++FD  H +L  F+ EF  TFDG+KWGHNGPYL++RVI+R+G    +N T+L
Sbjct: 278 WTRLNNAVLIFDIGHQLLHRFINEFALTFDGNKWGHNGPYLVSRVIKRLGKRHDFNFTVL 337

Query: 241 GLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
              AFYPV+W +ING + KP ++EESKWVE  +L+L ++TYG+HL
Sbjct: 338 PPMAFYPVDWNKINGLFMKPKTQEESKWVEAKLLQLRRKTYGIHL 382

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523288|ref|XP_003530272.1| PREDICTED: uncharacterized protein At4g19900-like [Glycine max]

 Score =  342 bits (878), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 155/285 (54%), Positives = 213/285 (74%)

Query: 1   MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
           + WFR KL + ++L S  LSR FH RV++F  ++C ++FFMIW SPA +FG R+ +++D+
Sbjct: 70  IAWFRGKLHEFKILNSDKLSRRFHARVLRFFSHECESRFFMIWESPAGSFGARELMSIDS 129

Query: 61  LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
           + K +P++CLV++SR+LDT R Y++LKP+LD GFK+  VTPDL  L K TPAEAWL ++K
Sbjct: 130 VFKVHPKACLVILSRTLDTIRSYRVLKPILDEGFKVQPVTPDLQFLFKGTPAEAWLNELK 189

Query: 121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
            GK DPG+  L  +LS+LIRLAVLYKYGGVYLD DFV+LK    LRN+IGAQ +D     
Sbjct: 190 KGKKDPGQISLFQNLSNLIRLAVLYKYGGVYLDIDFVVLKPISLLRNSIGAQSMDAGNKH 249

Query: 181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTIL 240
           WT LN A ++FD  HP+L  F+ EF  TFDG++WGHNGPYL++RV++R+G  PG+N TIL
Sbjct: 250 WTRLNNAVLIFDMNHPLLLRFIDEFVLTFDGNRWGHNGPYLVSRVVKRLGEKPGFNFTIL 309

Query: 241 GLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
              AFYP +W +I G ++KP +  ESK V+  +L+L+ E+YG+HL
Sbjct: 310 PPIAFYPADWKKIGGLFRKPKTRSESKLVDAKLLQLSGESYGVHL 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2042897	405	AT2G38150 [Arabidopsis thalian	0.996	0.703	0.608	3.5e-98
TAIR|locus:2095264	411	AT3G09020 [Arabidopsis thalian	0.975	0.678	0.505	2.6e-79
TAIR|locus:2150104	407	AT5G01250 [Arabidopsis thalian	0.979	0.687	0.503	1.8e-78
TAIR|locus:4010713690	380	AT2G38152 [Arabidopsis thalian	0.867	0.652	0.526	1.2e-72
TAIR|locus:2206006	435	AT1G61050 [Arabidopsis thalian	0.916	0.602	0.469	2.1e-68
MGI|MGI:3512453	359	A4galt "alpha 1,4-galactosyltr	0.762	0.607	0.336	1.2e-26
RGD|621583	360	A4galt "alpha 1,4-galactosyltr	0.762	0.605	0.323	6.6e-26
UNIPROTKB|G3MZ03	368	LOC618369 "Uncharacterized pro	0.748	0.581	0.317	2.9e-25
UNIPROTKB|F1PS29	411	A4GALT "Uncharacterized protei	0.762	0.530	0.307	5.5e-23
UNIPROTKB|E1C034	356	A4GALT "Uncharacterized protei	0.779	0.626	0.301	1e-22

TAIR|locus:2042897 AT2G38150 [Arabidopsis thaliana (taxid:3702)]

 Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
 Identities = 174/286 (60%), Positives = 221/286 (77%)

Query:     1 MEWFRKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDT 60
             ++WFR+KLP+LE+LKST  S+SFH RV+      C+ QFFMIW SPA +FGPR+ LA+DT
Sbjct:    85 IDWFRRKLPELEILKSTTKSKSFHTRVLDLYNKNCSAQFFMIWLSPANSFGPREMLAIDT 144

Query:    61 LMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIK 120
             L   NP +CL ++S SLD+  GY ILKPL D+GF ++ VT D+P LVK+TPAEAWLK++K
Sbjct:   145 LFTTNPGACLAILSNSLDSPNGYTILKPLFDQGFNLIAVTIDIPFLVKNTPAEAWLKRLK 204

Query:   121 NGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHK 180
             +G +DPG  PL ++LSDL RLAVLYKYGGVYLDTD + L D  GLRNAIGAQ  D  T +
Sbjct:   205 SGNMDPGSIPLFMNLSDLTRLAVLYKYGGVYLDTDIIFLNDMTGLRNAIGAQSSDPATKR 264

Query:   181 WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYN-LTI 239
             WT LN A MVFD  HP++ +FLQE+ TTFDG+KWG+N PYL++RVI+R+GN PGYN LTI
Sbjct:   265 WTRLNNAVMVFDIYHPLMREFLQEYATTFDGNKWGYNSPYLVSRVIKRLGNKPGYNNLTI 324

Query:   240 LGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
                 AFYPVNWI+I   +KKP +  E+KWVE+TV ++NK +Y +HL
Sbjct:   325 FSPDAFYPVNWIKIQKLFKKPATTREAKWVEKTVQDMNKGSYMIHL 370

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2095264 AT3G09020 [Arabidopsis thaliana (taxid:3702)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 141/279 (50%), Positives = 202/279 (72%)

Query:     7 KLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANP 66
             KL  LEV    ++S  F  R  +F ++ C  +F M W SPA  FG R+ L+V+++ K++ 
Sbjct:    99 KLQVLEVFGGKDVSEKFQQRATEFLRDDCEVKFMMTWISPAELFGKREILSVESVFKSHA 158

Query:    67 QSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDP 126
             + CL+++S ++D+ +G++ILKP LDRG++++ VTPDLP L+KDT  E+WL++I+ GK DP
Sbjct:   159 RGCLMILSSTMDSLQGFRILKPFLDRGYRVMAVTPDLPFLLKDTAGESWLEEIQTGKRDP 218

Query:   127 GKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNG 186
             GK  L+ +LS+L+RLA L+K+GGVYLDTD ++LK FK LRN IGAQ ++ V+  WT LN 
Sbjct:   219 GKISLAQNLSNLMRLAYLFKFGGVYLDTDMIVLKSFKTLRNVIGAQTLEPVSRNWTRLNN 278

Query:   187 AAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAFY 246
             A ++FDK HP L   ++EF  TF+G+ WGHNGPYL++RV + V  T GYN TIL   AFY
Sbjct:   279 AVLIFDKNHPFLLKSIEEFALTFNGNVWGHNGPYLVSRVARAVEGTDGYNFTILTPPAFY 338

Query:   247 PVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
             PVNW++I   +K P +E++SK V+  VLE+ K +YGLHL
Sbjct:   339 PVNWVEIEKLFKVPRTEKDSKRVQVKVLEMQKRSYGLHL 377

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2150104 AT5G01250 [Arabidopsis thaliana (taxid:3702)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 141/280 (50%), Positives = 197/280 (70%)

Query:     6 KKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKAN 65
             +KL  +EV    NLS  F  RV +F  + C   F M W SPA  FG R+ LA++++ K++
Sbjct:    94 EKLQVIEVFSGDNLSDKFQKRVNEFVGDGCEVNFVMTWISPADFFGNREVLAIESVFKSH 153

Query:    66 PQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKID 125
             P  CL+++S ++D+ +GY  LKP +DRG+K+L VTPDLP L+K T  E WL +IK+GK D
Sbjct:   154 PYGCLMILSATMDSPQGYATLKPFIDRGYKVLAVTPDLPFLLKGTAGELWLDEIKSGKRD 213

Query:   126 PGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLN 185
             PGK  L+ +LS+L+RLA LYKYGGVYLDTD ++LK FKGLRN IGAQ +D  +  WT LN
Sbjct:   214 PGKISLAQNLSNLMRLAYLYKYGGVYLDTDMIVLKSFKGLRNVIGAQTLDPSSTNWTRLN 273

Query:   186 GAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKAF 245
              A ++FDK HP+L  F++EF  TF+G+ WG+NGPYL++RV + V  + GYN T++    F
Sbjct:   274 NAVLIFDKNHPLLLKFMEEFAKTFNGNIWGYNGPYLVSRVARAVEGSSGYNFTVMRPSVF 333

Query:   246 YPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
             Y VNW++I   +K P +E++SKWV+  +L + +  YGLHL
Sbjct:   334 YSVNWLEIKKLFKVPKTEKDSKWVKTKLLHMQRNGYGLHL 373

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:4010713690 AT2G38152 [Arabidopsis thaliana (taxid:3702)]

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 131/249 (52%), Positives = 186/249 (74%)

Query:    38 QFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKIL 97
             +FFM WFSPA  FG R+ LAV+++ KA+PQ CL+++S SLD+ +G  ILKPL DRG+K+ 
Sbjct:   100 RFFMTWFSPAEYFGKREMLAVESVFKAHPQGCLMIVSGSLDSLQGDSILKPLNDRGYKVF 159

Query:    98 TVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFV 157
               TPD+  L+++TPA++W +++K+ K DPG+ PL  +LS+L RLA LYKYGGVYLDTDF+
Sbjct:   160 AATPDMSLLLENTPAKSWFQEMKSCKRDPGRIPLHQNLSNLARLAFLYKYGGVYLDTDFI 219

Query:   158 ILKDFKGLRNAIGAQGVDQVTHK-WTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGH 216
             + + FKGL+N+IGAQ V +   K WT LN A ++F+K HP+++ F++EF +TFDG+KWGH
Sbjct:   220 VTRSFKGLKNSIGAQTVVEGDSKNWTRLNNAVLIFEKDHPLVYSFIEEFASTFDGNKWGH 279

Query:   217 NGPYLLTRVIQRVGNTPGYNLTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLEL 276
             NGPYL+TRV QR   T G N T+L   AFYP NW+ I   ++ P    +S  ++  +++L
Sbjct:   280 NGPYLVTRVAQRARETIGDNFTVLPPVAFYPFNWLDIPRLFQTPRGSNDSTLLKTDLVKL 339

Query:   277 NKETYGLHL 285
             N+E+YGLHL
Sbjct:   340 NRESYGLHL 348

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

TAIR|locus:2206006 AT1G61050 [Arabidopsis thaliana (taxid:3702)]

 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 125/266 (46%), Positives = 175/266 (65%)

Query:    23 FHDRVVKF-SKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRR 81
             F  RV    SK+ C + FFM W S   +FG R+   +++L K +P  CL+L+S S D  R
Sbjct:   136 FQTRVKSLLSKSSCESLFFMTWISSIESFGDRERFTIESLFKFHPNGCLILVSNSFDCDR 195

Query:    82 GYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRL 141
             G  ILKP  D+G K+L + PD   + KDT AE W +++K G + PG  PL  +LS+L+RL
Sbjct:   196 GTLILKPFTDKGLKVLPIKPDFAYIFKDTSAEKWFERLKKGTLSPGVIPLEQNLSNLLRL 255

Query:   142 AVLYKYGGVYLDTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDF 201
              +LYKYGG+YLDTD +ILK    L N IGAQ VD VT KW+ LN A ++FDK HP+L  F
Sbjct:   256 VLLYKYGGIYLDTDVIILKSLSNLHNVIGAQTVDPVTKKWSRLNNAVLIFDKNHPLLKRF 315

Query:   202 LQEFTTTFDGSKWGHNGPYLLTRVIQRV--GNTPGYNLTILGLKAFYPVNWIQINGFYKK 259
             + EF+ TF+G+KWGHNGPYL++RVI R+   ++     ++L   AFYPV+W +I GFY+ 
Sbjct:   316 IDEFSRTFNGNKWGHNGPYLVSRVITRIKISSSSDLGFSVLPPSAFYPVDWTRIKGFYRA 375

Query:   260 PVSEEESKWVEETVLELNKETYGLHL 285
             P +E ++ W+ + +  L K T+ +HL
Sbjct:   376 PTNESDA-WLRKRLTHLRKNTFAVHL 400

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005795 "Golgi stack" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

MGI|MGI:3512453 A4galt "alpha 1,4-galactosyltransferase" [Mus musculus (taxid:10090)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 81/241 (33%), Positives = 133/241 (55%)

Query:    57 AVDTLMKANPQSCLVLISRSL--DTRRGYKILKPLLDRGFKILTVTP-DLPSLVKDTPAE 113
             +V++  +A+P+S +V++ + L  DT    + L   L   F  + + P DL  L +DTP  
Sbjct:   103 SVESAARAHPESQVVVLMKGLPRDTTAQPRNLGISLLSCFPNVWIRPLDLQELFEDTPLA 162

Query:   114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQG 173
             AW  + ++ + +P + P+   LSD  R+A+L+K+GG+YLDTDF++LK+   L N +G Q 
Sbjct:   163 AWYSEARH-RWEPYQLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLLNLTNTLGIQS 218

Query:   174 VDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRV------IQ 227
                   ++  LNGA + F+++H  L   L +F   ++G  WGH GP LLTRV      IQ
Sbjct:   219 ------RYV-LNGAFLAFERKHEFLALCLHDFVANYNGWIWGHQGPQLLTRVFKKWCSIQ 271

Query:   228 RVGNTPGYN-LTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKETYGLH 284
              +  +     +T L  +AFYP+ W     +++    EE ++ +  T  V   NK++ G H
Sbjct:   272 SLEKSHACRGVTALPPEAFYPIPWQNWKKYFEDISPEELTQLLNATYAVHVWNKKSQGTH 331

Query:   285 L 285
             L
Sbjct:   332 L 332

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0008378 "galactosyltransferase activity" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0050512 "lactosylceramide 4-alpha-galactosyltransferase activity" evidence=IEA

RGD|621583 A4galt "alpha 1,4-galactosyltransferase" [Rattus norvegicus (taxid:10116)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 78/241 (32%), Positives = 133/241 (55%)

Query:    57 AVDTLMKANPQSCLVLISRSL--DTRRGYKILKPLLDRGFKILTVTP-DLPSLVKDTPAE 113
             +V++  +A+P+S +V++ + L  DT    + L   L   F  + + P DL  L +DTP  
Sbjct:   104 SVESAARAHPESQVVVLMKGLPRDTTAWPRNLGISLLSCFPNVQIRPLDLQELFEDTPLA 163

Query:   114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQG 173
             AW  + ++ + +P   P+   LSD  R+A+L+K+GG+YLDTDF++LK+ + L N +G Q 
Sbjct:   164 AWYLEAQH-RWEPYLLPV---LSDASRIALLWKFGGIYLDTDFIVLKNLRNLTNMLGIQS 219

Query:   174 VDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTP 233
                   ++  LNGA + F+++H  L   +++F   ++G  WGH GP LLTRV ++  +  
Sbjct:   220 ------RYV-LNGAFLAFERKHEFLALCIRDFVAHYNGWIWGHQGPQLLTRVFKKWCSIH 272

Query:   234 GYN-------LTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKETYGLH 284
                       +T L  +AFYP+ W     +++    EE ++ +  T  V   NK++ G H
Sbjct:   273 SLKESRACRGVTALPPEAFYPIPWQNWKKYFEDVSPEELAQLLNATYAVHVWNKKSQGTH 332

Query:   285 L 285
             L
Sbjct:   333 L 333

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA;ISO

GO:0008378 "galactosyltransferase activity" evidence=ISO;ISS;IDA

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0050512 "lactosylceramide 4-alpha-galactosyltransferase activity" evidence=IEA

UNIPROTKB|G3MZ03 LOC618369 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 76/239 (31%), Positives = 132/239 (55%)

Query:    57 AVDTLMKANPQSCLVLISRSL---DTRRGYKILKPLLDRGFKILTVTP-DLPSLVKDTPA 112
             +V++  +A+P+S +V++ + L   +  R   +   LL   F  + + P DL  L +DTP 
Sbjct:   112 SVESAARAHPESPVVVLMKGLPGGNASRPRHLGLSLLGC-FPNVQMRPLDLGELFRDTPL 170

Query:   113 EAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQ 172
              AW   ++  + +P   P+   LSD  R+A+L+K+GG+YLDTDF++LKD + L NA+G Q
Sbjct:   171 AAWYAAVQR-RWEPYLLPV---LSDASRIALLWKFGGIYLDTDFIVLKDLRNLTNALGTQ 226

Query:   173 GVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNT 232
                    ++  LNGA + F++ H  +   +++F T ++G  WGH GP LLTRV ++  + 
Sbjct:   227 S------RYV-LNGAFLAFEQHHEFMAQCMRDFVTHYNGWIWGHQGPQLLTRVFKKWCSI 279

Query:   233 PGYN-------LTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKETYG 282
                +       +T L  +AFYP+ W     +++    +E ++ +  T  V   NK++ G
Sbjct:   280 RSLSESRACRGVTTLPPEAFYPIPWQNWKKYFEDISPQELTRLLNATFAVHVWNKKSQG 338

GO:0016020 "membrane" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

UNIPROTKB|F1PS29 A4GALT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 267 (99.0 bits), Expect = 5.5e-23, P = 5.5e-23
 Identities = 74/241 (30%), Positives = 127/241 (52%)

Query:    57 AVDTLMKANPQSCLVLISRSLDTRRGY--KILKPLLDRGFKILTVTP-DLPSLVKDTPAE 113
             +V++  +A+P+S +V++ + L        + L   L   F  + + P DL  L +DTP  
Sbjct:   155 SVESAARAHPESRVVVLMKGLPGGNASLPRHLGLSLLGCFPNVHMLPLDLEELFRDTPLA 214

Query:   114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIGAQG 173
             AW    +  + +P   P+   LSD  R+A+++K+GG+YLDTDF++LK+   L N +GAQ 
Sbjct:   215 AWYAG-RQRRWEPYLLPV---LSDACRIALMWKFGGIYLDTDFIVLKNLHNLTNTLGAQS 270

Query:   174 VDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTP 233
                   ++  LNGA + F++ H  +   +++F   ++G  WGH GP LLTRV ++  +  
Sbjct:   271 ------RYV-LNGAFLAFERHHEFMALCMRDFVAHYNGWIWGHQGPQLLTRVFKKWCSIR 323

Query:   234 GYN-------LTILGLKAFYPVNWIQINGFYKKPVSEEESKWVEET--VLELNKETYGLH 284
               +       +T L  +AFYP+ W     +++    EE  + +  T  V   NK++ G  
Sbjct:   324 SLDESHACRGVTTLPCEAFYPIPWQDWKKYFQDISPEELHRLLNATYAVHVWNKKSQGTR 383

Query:   285 L 285
             L
Sbjct:   384 L 384

GO:0016020 "membrane" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

UNIPROTKB|E1C034 A4GALT "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 79/262 (30%), Positives = 130/262 (49%)

Query:    52 PRDFLAVDTLMKANPQSCLVL-ISRSLDTRRGYKI---LKPLLDR--------GFKILTV 99
             P D   V+T  + NP    +  +  +  T  G ++   +K L +R        GF +L+ 
Sbjct:    79 PGDVFFVETSERTNPNYLFMCSVESAARTHPGTRVVVLMKGLANRNASLPNHWGFSLLSC 138

Query:   100 TP-------DLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYL 152
              P       DLP L   TP   W  + +  + +P   P+   LSD  R+A+++K+GG+YL
Sbjct:   139 FPNVEIRPLDLPELFSGTPLAQWYLQAQQ-RWEPYFLPI---LSDACRIAIMWKFGGIYL 194

Query:   153 DTDFVILKDFKGLRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGS 212
             DTDF++LK+ K L N +G Q       K+  LNGA + F  +H  +   +Q+F   ++  
Sbjct:   195 DTDFIVLKNLKNLTNVLGTQS------KYV-LNGAFLSFTPKHKFIELCMQDFVENYNSW 247

Query:   213 KWGHNGPYLLTRV------IQRVGNTPGYN-LTILGLKAFYPVNWIQINGFYKKPVSEEE 265
              WGH GP LLTRV      I+ + ++     ++ L  +AFYP+ W     +++   S E 
Sbjct:   248 IWGHQGPQLLTRVFKKWCSIRSLRSSKSCKGVSALPREAFYPIRWQDWKKYFEVVSSTEL 307

Query:   266 SKWVEET--VLELNKETYGLHL 285
             ++ ++ T  V   NK++ G  L
Sbjct:   308 NELLKNTYAVHVWNKKSQGTRL 329

GO:0005795 "Golgi stack" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Al_scaffold_0004_2376 annotation not avaliable (750 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	286
pfam04572	135	pfam04572, Gb3_synth, Alpha 1,4-glycosyltransferas	3e-29
pfam04488	93	pfam04488, Gly_transf_sug, Glycosyltransferase sug	8e-17
pfam05704	279	pfam05704, Caps_synth, Capsular polysaccharide syn	1e-04

>gnl|CDD|146960 pfam04572, Gb3_synth, Alpha 1,4-glycosyltransferase conserved region

 Score =  107 bits (269), Expect = 3e-29
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 17/106 (16%)

Query: 189 MVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTP---------GYNLTI 239
           M F+  HP+    L++F   F+G+KWGHNGP L+TRV+++  NT              T+
Sbjct: 1   MNFEPHHPLAEMCLRDFAANFNGNKWGHNGPGLVTRVLRKWCNTGDFAGMTRLRCGGFTV 60

Query: 240 LGLKAFYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHL 285
           L   AFYP+ W Q   F+++P  EE   WV        KE+Y +HL
Sbjct: 61  LPPDAFYPIPWPQWKKFFEEPRLEETMNWV--------KESYAVHL 98

The glycosphingolipids (GSL) form part of eukaryotic cell membranes. They consist of a hydrophilic carbohydrate moiety linked to a hydrophobic ceramide tail embedded within the lipid bilayer of the membrane. Lactosylceramide, Gal1,4Glc1Cer (LacCer), is the common synthetic precursor to the majority of GSL found in vertebrates. Alpha 1.4-glycosyltransferases utilise UDP donors and transfer the sugar to a beta-linked acceptor. This region appears to be confined to higher eukaryotes. No function has been yet assigned to this region. Length = 135

>gnl|CDD|218109 pfam04488, Gly_transf_sug, Glycosyltransferase sugar-binding region containing DXD motif

 Score = 73.5 bits (181), Expect = 8e-17
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 33/122 (27%)

Query: 51  GPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDT 110
             R+  A+++L+  +P  C+V+++  L                        D+  L  DT
Sbjct: 1   PEREMKAIESLISLHPDYCVVVLNDDL--------------------DKILDINFLKSDT 40

Query: 111 PAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRNAIG 170
           P   W  +  +        PL    SDL+R A+LYKYGG+YLDTD + LK      N+IG
Sbjct: 41  P---WFLEAYSLL------PLFAAKSDLLRYAILYKYGGIYLDTDVIPLKSL----NSIG 87

Query: 171 AQ 172
           AQ
Sbjct: 88  AQ 89

The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases. Length = 93

>gnl|CDD|218707 pfam05704, Caps_synth, Capsular polysaccharide synthesis protein

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 6/47 (12%)

Query: 116 LKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDF 162
           ++K ++GKI         H SD++RL +L KYGG+++D       D 
Sbjct: 100 IEKFESGKISR------AHFSDILRLNLLAKYGGLWIDATIYCTGDL 140

This family consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. Length = 279

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
KOG1928	409	consensus Alpha-1,4-N-acetylglucosaminyltransferas	100.0
PF05704	276	Caps_synth: Capsular polysaccharide synthesis prot	99.91
PF04488	103	Gly_transf_sug: Glycosyltransferase sugar-binding	99.84
PF04572	135	Gb3_synth: Alpha 1,4-glycosyltransferase conserved	99.82
COG3774	347	OCH1 Mannosyltransferase OCH1 and related enzymes	99.75
PF12919	514	TcdA_TcdB: TcdA/TcdB catalytic glycosyltransferase	98.92
PRK15382	326	non-LEE encoded effector protein NleB; Provisional	95.27
PRK15383	335	type III secretion system protein; Provisional	94.94
PRK15384	336	type III secretion system protein; Provisional	94.93
cd06914	278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	93.9
cd02537	240	GT8_Glycogenin Glycogenin belongs the GT 8 family	93.03
PRK15171	334	lipopolysaccharide 1,3-galactosyltransferase; Prov	92.96
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	90.61
cd06431	280	GT8_LARGE_C LARGE catalytic domain has closest hom	86.54
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	85.26
cd06429	257	GT8_like_1 GT8_like_1 represents a subfamily of GT	83.68
PF03407	212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	82.92
PLN00176	333	galactinol synthase	82.8

>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-57  Score=416.27  Aligned_cols=279  Identities=51%  Similarity=0.977  Sum_probs=259.1

Q ss_pred             hcccCCceeeccCCCchhhHHHHhhhccCCcceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCccCCccccc
Q 042169            5 RKKLPDLEVLKSTNLSRSFHDRVVKFSKNQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYK   84 (286)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~~~~~~~~~   84 (286)
                      +..++.+++++|...+++|+.+...++...|+.+|+|.|+|+...++.|+.|||||++++||+++|++++++.++..|+.
T Consensus        97 ~~~l~e~~~~~s~~~~~sf~~~~~~~~~~~c~~~~fm~w~S~~~~f~~r~~~sIESa~k~hP~~cv~vls~t~ds~~~~s  176 (409)
T KOG1928|consen   97 KIELQELENLSSELKSPSFQSRVNSFFRKECSVRFFMTWISPAESFGVREMCSIESAFKTHPEGCVVVLSKTMDSPNGYS  176 (409)
T ss_pred             cchhhheeeccccccCcccCCCcchhhccCCceeEEEEecccccCCChhhhhhhHHHHhhCCCceEEEEEccccCCCCcc
Confidence            35788999999999999999999999888899999999999999999999999999999999999999999988888899


Q ss_pred             cchhhhhcCccEEEECCChhhhhccCchHHHHHhhhcCccCCCCCCchhhhHhHHHHHHHHHhCcEEEeCCeeeeccchh
Q 042169           85 ILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKG  164 (286)
Q Consensus        85 ~~~~l~~~~~~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lL~~~GGiYlD~Dv~~~rpl~~  164 (286)
                      +.++|.+++++|..+.+|++.++++||.+.|.+.+++|+.+++++++..+.||+.|+++||||||||||+||+++|++..
T Consensus       177 ~~kp~~~~~lsv~~v~~~lp~llk~t~~e~~l~~~k~g~~~~~~~~l~~~lSdl~RLA~LyKYGGvYLDTDvIvLksl~~  256 (409)
T KOG1928|consen  177 ILKPFLDSGLSVIAVTPDLPFLLKDTPGETWLERWKDGRLDPGKIPLLQNLSDLSRLALLYKYGGVYLDTDVIVLKSLSN  256 (409)
T ss_pred             ccccHhHhhhhhcccccCchhhHhhCccccHHHHHHhcccCCCcccchhhHHHHHHHHHHHHhCCEEeeccEEEeccccc
Confidence            99999999999999999999999999999999999999999999998778999999999999999999999999999999


Q ss_pred             hhhhhccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHHhcCCCcccccccHHHHHHHHHHcCCCCCcEEEecCCc
Q 042169          165 LRNAIGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTPGYNLTILGLKA  244 (286)
Q Consensus       165 l~~~~~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~~~~~~~~~~~GP~~lt~~~~~~~~~~~~~~~i~p~~~  244 (286)
                      +.|.+|..   +....|..++||+|++.++|||+.+||+++...|+|..||.+||.++|||+++.|+..+..++|.|+..
T Consensus       257 l~N~ig~~---~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~NGP~LvTRVakr~c~~~~~~~~i~~p~~  333 (409)
T KOG1928|consen  257 LRNVIGVD---PATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHNGPYLVTRVAKRWCNTKNYNLTILPPSA  333 (409)
T ss_pred             cccccccc---chhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHhCCCCccceecCccc
Confidence            99988832   223467899999999999999999999999999999999999999999999999998877888999999


Q ss_pred             cccCCccchhccccCCCchhhhHHHHHHHhhhcCceEEEEeC
Q 042169          245 FYPVNWIQINGFYKKPVSEEESKWVEETVLELNKETYGLHLL  286 (286)
Q Consensus       245 F~P~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~sy~iHlw  286 (286)
                      |||++|.++..||.-|..+-++.|..+++..+.++||+||+|
T Consensus       334 f~~vn~~~i~~fy~iP~~ew~~~~~~~~~~~~~k~Sy~vHlW  375 (409)
T KOG1928|consen  334 FYPVNWLEIQAFYAIPWTEWDRKFVDEETLKMLKNSYAVHLW  375 (409)
T ss_pred             cCceeeeccccccccchhHhhhhhhHHHHHHHhccCeEEEee
Confidence            999999999999988877767777677788889999999999

>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins

Probab=99.91  E-value=4.4e-24  Score=194.12  Aligned_cols=157  Identities=20%  Similarity=0.363  Sum_probs=112.0

Q ss_pred             chhhHHHHhhhcc-----CCcceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCccCCccccccchhhhhcCc
Q 042169           20 SRSFHDRVVKFSK-----NQCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGF   94 (286)
Q Consensus        20 ~~~f~~~~~~~~~-----~~~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~~~~~~~~~~~~~l~~~~~   94 (286)
                      .++|.+.+..+..     ...+..||+||.||.+++|+.++.||+|+.+++|+++|+++++.                  
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~k~IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~~~Vi~lt~~------------------   85 (276)
T PF05704_consen   24 KKKYKDFISKYQYKKKKPETNEKIIWVCWWQGEENAPEIVKKCINSWRKNAPDYEVILLTED------------------   85 (276)
T ss_pred             HHHHHHHHHHhhhcccCcCCCCCcEEEEECCCccccCHHHHHHHHHHHHHCCCCeEEEEChH------------------
Confidence            4455555554422     23455699999999999999999999999999999999999864                  


Q ss_pred             cEEEECCChhhhhccCchHHHHHhhhcCccCCCCCCchhhhHhHHHHHHHHHhCcEEEeCCeeeeccchhhhh---hhcc
Q 042169           95 KILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLRN---AIGA  171 (286)
Q Consensus        95 ~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lL~~~GGiYlD~Dv~~~rpl~~l~~---~~~~  171 (286)
                             |+.+|+ +.|.. ..+++.+|.++      .+|+||++|+.+|++|||+|+|+||+|++|++....   ++.+
T Consensus        86 -------Ni~~Yv-~~P~~-i~~k~~~g~i~------~a~~SDilR~~LL~~yGGvWiDatv~~t~~l~~~~~~~~ff~~  150 (276)
T PF05704_consen   86 -------NIKDYV-DIPDF-ILEKYEKGKIS------PAHFSDILRLALLYKYGGVWIDATVYLTKPLDDEIFDSDFFSF  150 (276)
T ss_pred             -------HHHHHc-CCchh-HHHHHHcCCCc------hhHHHHHHHHHHHHHcCcEEeCCceEECCchhHHHhcCCeeEE
Confidence                   122332 22322 13445566553      589999999999999999999999999999998642   3444


Q ss_pred             cccccc--CCCcccccceEEEeeCCCHHHHHHHHHHHHhc
Q 042169          172 QGVDQV--THKWTTLNGAAMVFDKRHPILFDFLQEFTTTF  209 (286)
Q Consensus       172 ~~~~~~--~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~~~  209 (286)
                      ......  ........|.+|++++|||+++.+.+.+.+-.
T Consensus       151 ~~~~~~~~~~~~~~w~~~fi~a~~~n~~~~~~~~~~~~yw  190 (276)
T PF05704_consen  151 SRPDKDYNPISISSWTNFFIAAKKGNPFIKFWRDLLLEYW  190 (276)
T ss_pred             eccCcCcccchHHHhHhhheeECCCCHHHHHHHHHHHHHH
Confidence            221111  01112334559999999999999999888653

Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].

>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif

Probab=99.84  E-value=2.8e-21  Score=150.88  Aligned_cols=96  Identities=33%  Similarity=0.583  Sum_probs=75.5

Q ss_pred             CHHHHHHHHHHHHHCCCCeEEEEeCccCCccccccchhhhhcCccEEEECCChhhhhccCchHHHHHhhhcCccCCCCCC
Q 042169           51 GPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNP  130 (286)
Q Consensus        51 ~~r~~caIeS~~~~~P~~~V~l~~~~~~~~~~~~~~~~l~~~~~~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~  130 (286)
                      |+++.|+||||+++||++++++|+++..                |+.+..+|+..++.++|   |+.+..+ +++.+..+
T Consensus         1 P~~~~~~i~s~~~~nP~~~~~~~~d~~~----------------~~~~~~~~~~~l~~~~~---~~~~~~~-~~~~~~~~   60 (103)
T PF04488_consen    1 PERFQCSIESWARHNPDYEYILWTDESD----------------NVRVKRIDIEFLFEKTP---WFLELYN-KWEPGRYP   60 (103)
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCc----------------chhhhHHHHHHHHhCCh---HHHHHHh-hhhccccc
Confidence            6789999999999999999999998642                34444567888887777   4444332 22223344


Q ss_pred             chhhhHhHHHHHHHHHhCcEEEeCCeeeeccc-hhhh
Q 042169          131 LSIHLSDLIRLAVLYKYGGVYLDTDFVILKDF-KGLR  166 (286)
Q Consensus       131 ~~a~~SD~~R~~lL~~~GGiYlD~Dv~~~rpl-~~l~  166 (286)
                      ..+++||++|+++||++||||+|+|++|+||+ +.++
T Consensus        61 ~~~~~sD~~R~~~L~~~GGiY~D~D~~~~rpl~~~~~   97 (103)
T PF04488_consen   61 NYAHKSDLLRYLVLYKYGGIYLDLDVICLRPLDDPWL   97 (103)
T ss_pred             chHHHHHHHHHHHHHHcCcEEEeCccccCcchhhhhh
Confidence            46899999999999999999999999999999 7665

The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].

>PF04572 Gb3_synth: Alpha 1,4-glycosyltransferase conserved region; InterPro: IPR007652 The glycosphingolipids (GSL) form part of eukaryotic cell membranes

Probab=99.82  E-value=1.8e-20  Score=153.28  Aligned_cols=90  Identities=43%  Similarity=0.907  Sum_probs=80.0

Q ss_pred             EEeeCCCHHHHHHHHHHHHhcCCCcccccccHHHHHHHHHHcCCC---------CCcEEEecCCccccCCccchhccccC
Q 042169          189 MVFDKRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGNTP---------GYNLTILGLKAFYPVNWIQINGFYKK  259 (286)
Q Consensus       189 ~~~~~~hp~l~~~l~~~~~~~~~~~~~~~GP~~lt~~~~~~~~~~---------~~~~~i~p~~~F~P~~~~~~~~~f~~  259 (286)
                      |++.++|||++++|+++.++|+++.|+.+||.++||+++++|+..         +.+++|+|+++|||++|.+|++||++
T Consensus         1 m~F~~~H~~~~~~l~df~~~Y~~~~w~~nGP~lltRVl~~~C~~~~~~~~~~~~C~~~~vlp~~~FYPI~~~~~~~~F~~   80 (135)
T PF04572_consen    1 MAFDKGHPFLWECLEDFVKNYDGNKWGHNGPDLLTRVLKKFCNTENFKDMEDNRCRGFSVLPPEAFYPIPYQDWKRFFEP   80 (135)
T ss_pred             CCCCCCCHHHHHHHHHHHHHcCcchhcccCcHHHHHHHHHHhcCCCccccccccCCCeEEcCccceeccChhHhHHHhcC
Confidence            578999999999999999999999999999999999999998753         24799999999999999999999999


Q ss_pred             CCchhhhHHHHHHHhhhcCceEEEEeC
Q 042169          260 PVSEEESKWVEETVLELNKETYGLHLL  286 (286)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~sy~iHlw  286 (286)
                      +...+..+|        .++||+||+|
T Consensus        81 ~~~~~~~~~--------~~~Sy~vHlW   99 (135)
T PF04572_consen   81 PSTEEVMEW--------LKNSYAVHLW   99 (135)
T ss_pred             CcchHHHHH--------hhCceEEEec
Confidence            877643333        3499999999

They consist of a hydrophilic carbohydrate moiety linked to a hydrophobic ceramide tail embedded within the lipid bilayer of the membrane. Lactosylceramide, Gal1,4Glc1Cer (LacCer), is the common synthetic precursor to the majority of GSL found in vertebrates. Alpha 1.4-glycosyltransferases utilise UDP donors and transfer the sugar to a beta-linked acceptor []. No function has been yet assigned to this domain ; GO: 0008378 galactosyltransferase activity, 0005795 Golgi stack

>COG3774 OCH1 Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]

Probab=99.75  E-value=1.5e-18  Score=160.35  Aligned_cols=160  Identities=20%  Similarity=0.327  Sum_probs=118.5

Q ss_pred             CcceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCccCCccccccchhhhhcCccEEEECCChhhhhccCchH
Q 042169           34 QCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAE  113 (286)
Q Consensus        34 ~~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~~~~~~~~~~~~~l~~~~~~v~~~~~d~~~~~~~tP~~  113 (286)
                      .....||++|.++.  +|+...-+.++|..+|||++.++|++...+        ++.+.         +.       |  
T Consensus        81 ~IPk~IwQTw~~~~--~P~~~~~~~~~~~~~~PdY~yi~~tD~~~~--------~~v~h---------~~-------~--  132 (347)
T COG3774          81 AIPKIIWQTWSNEK--FPEYVNKLFNRWRSLHPDYRYILWTDEMRE--------PLVEH---------DY-------P--  132 (347)
T ss_pred             hHHHHHHHHhcCCC--CCHHHHHHHHHHHhcCCCeEEEecchhhhh--------HHHhh---------cc-------H--
Confidence            34667999998877  788888889999999999999999875322        22211         11       1  


Q ss_pred             HHHHhhhcCccCCCCCCchhhhHhHHHHHHHHHhCcEEEeCCeeeeccchhhh-hhhccccccccCCCcccccceEEEee
Q 042169          114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLR-NAIGAQGVDQVTHKWTTLNGAAMVFD  192 (286)
Q Consensus       114 ~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lL~~~GGiYlD~Dv~~~rpl~~l~-~~~~~~~~~~~~~~~~~l~n~~~~~~  192 (286)
                       |+-+..      +..|+++.++|++||.+|++|||||+|+|.-|.+++++++ +.-.+-...    ....++|.+|++.
T Consensus       133 -~~~~ay------~~yp~~~~raD~~RYfvL~~~GGIY~DiD~~~~~~id~~l~~~~~~l~~~----~~~~v~n~~m~s~  201 (347)
T COG3774         133 -WFLDAY------RRYPYGALRADFWRYFVLYHYGGIYLDIDTGLVKPIDPLLDDAEAWLRRT----IPLGVGNGVMGSA  201 (347)
T ss_pred             -HHHHHH------HccCcchhhhhhHhheeeeccCcEEEeCCcccccCCcccccchHHHhhhc----CCCcccchhhccC
Confidence             222211      1234578999999999999999999999999999999987 321111110    1256889999999


Q ss_pred             CCCHHHHHHHHHHHHhc--C---CCcccccccHHHHHHHHHHcCC
Q 042169          193 KRHPILFDFLQEFTTTF--D---GSKWGHNGPYLLTRVIQRVGNT  232 (286)
Q Consensus       193 ~~hp~l~~~l~~~~~~~--~---~~~~~~~GP~~lt~~~~~~~~~  232 (286)
                      |+||+++.+++.+....  .   -..+..|||.+++.+..++...
T Consensus       202 p~hp~~~~~i~~~~~~~~~~~p~~ti~~stGp~iL~~i~~~~~~~  246 (347)
T COG3774         202 PGHPFLKKMIERLPYNIIWKFPYWTIQASTGPLILSEIHSAYTVQ  246 (347)
T ss_pred             CCCchHHHHHHHhhhccccCCCceeeecCCCChhHHHHHHHhhcc
Confidence            99999999999998221  1   1345689999999999998653

>PF12919 TcdA_TcdB: TcdA/TcdB catalytic glycosyltransferase domain; InterPro: IPR024770 Toxins A (TcdA) and B (TcdB) of Clostridium difficile belong to the family of clostridial glucosylating toxins

Probab=98.92  E-value=3.5e-09  Score=103.25  Aligned_cols=38  Identities=21%  Similarity=0.217  Sum_probs=29.5

Q ss_pred             eEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           37 TQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        37 ~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      ..|||+|.+|.  +|..|.-.|.-|+++|||+++.+|.++
T Consensus         2 K~iH~iWigG~--~~~~~~~Yik~w~~~n~dy~~~lW~D~   39 (514)
T PF12919_consen    2 KNIHFIWIGGA--PPDIQRDYIKTWKDTNPDYTINLWYDS   39 (514)
T ss_dssp             SEEEEE--SS-----HHHHHHHHHHHHHTTTSEEEEEE-T
T ss_pred             CeEEEEEeCCC--CchhHHHHHHHHHHHCCCCEEEEEECc
Confidence            57999999988  589999999999999999999999753

These toxins glucosylate small GTPases of Rho and Ras families, inhibiting the signalling and regulatory functions of these switch proteins. After receptor-binding, the toxins are endocytosed to reach acidic endosomal compartments from where the toxins are translocated into the cytosol []. TcdB has been shown to consist of a N-terminal glucosyltransferase domain (GTD), responsible for the biological effects of the toxin, a cysteine protease domain (CPD), responsible for autocatalytic cleavage, a hydrophobic region (HR), which has been suggested to be involved in toxin translocation, and a C-terminal repetitive domain involved in receptor binding. The pore-forming region of toxin B has been described to be in a region in the middle of the protein, within amino acid residues 830 and 990 []. This entry represents the N-terminal glucosyltransferase domain from TcdA and TcdB. It is also found in other toxins. The GTD of TcdB has been shown to glycosylate the host's RhoA protein [].; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 2BVL_A 2BVM_A 2VKH_C 2VL8_A 2VKD_A 3SS1_A 3SRZ_A 2VK9_A.

>PRK15382 non-LEE encoded effector protein NleB; Provisional

Probab=95.27  E-value=0.041  Score=48.92  Aligned_cols=77  Identities=26%  Similarity=0.375  Sum_probs=53.3

Q ss_pred             HhHHHHHHHHHhC-------------------cEEEeCCeeeeccchhhhh--hhccccccccCCCcccccceEEEe-eC
Q 042169          136 SDLIRLAVLYKYG-------------------GVYLDTDFVILKDFKGLRN--AIGAQGVDQVTHKWTTLNGAAMVF-DK  193 (286)
Q Consensus       136 SD~~R~~lL~~~G-------------------GiYlD~Dv~~~rpl~~l~~--~~~~~~~~~~~~~~~~l~n~~~~~-~~  193 (286)
                      =|++|-+.|.|-|                   -||+|+|++++.-|.-+..  -++..-...  .+...+.||+++. +.
T Consensus       182 FDF~RNlalLK~g~~F~e~~k~gch~is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~--~~~~slENg~I~VnRs  259 (326)
T PRK15382        182 FDFFRNLALLKAGELFTETGKTGCHNISPCEGCIYLDADMIITDKLGVLYAPDGIAVHVDCN--DDSKSLENGAIVVNRS  259 (326)
T ss_pred             hHHHHHHHHHhcccceeecCCCCCcccCCCCceEEeecceeeecccccEEcCCceEEEEEec--CCccccccceEEEccC
Confidence            4999999888754                   3899999999988876532  222111110  1124577887765 56


Q ss_pred             CCHHHHHHHHHHHHhcCCCcc
Q 042169          194 RHPILFDFLQEFTTTFDGSKW  214 (286)
Q Consensus       194 ~hp~l~~~l~~~~~~~~~~~~  214 (286)
                      +||.+.+-++.+....++..+
T Consensus       260 nHPALl~GL~iMhsK~da~PY  280 (326)
T PRK15382        260 NHPALLAGLDIMKSKVDAHPY  280 (326)
T ss_pred             CCHHHHhhhHHhhcCCCCCcc
Confidence            999999999999988766543

>PRK15383 type III secretion system protein; Provisional

Probab=94.94  E-value=0.087  Score=46.91  Aligned_cols=78  Identities=21%  Similarity=0.308  Sum_probs=53.5

Q ss_pred             hHhHHHHHHHHHhCc-------------------EEEeCCeeeeccchhhhh--hhccccccccCCCcccccceEEEe-e
Q 042169          135 LSDLIRLAVLYKYGG-------------------VYLDTDFVILKDFKGLRN--AIGAQGVDQVTHKWTTLNGAAMVF-D  192 (286)
Q Consensus       135 ~SD~~R~~lL~~~GG-------------------iYlD~Dv~~~rpl~~l~~--~~~~~~~~~~~~~~~~l~n~~~~~-~  192 (286)
                      -=|++|-+.|.|-|+                   ||+|+|++++.-|.-+..  -++..-...  .+...+.||+++. +
T Consensus       189 wFDF~RNlalLK~g~~F~e~~k~gch~is~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~--~~~~slENg~I~VnR  266 (335)
T PRK15383        189 WFDFYRNLFLLKGSDAFLEAGKHGCHHLQPGGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRK--DNHVSLENGIIAVNR  266 (335)
T ss_pred             ehHHHHHHHHHhcccceeeccccCCcccCCCCceEEeecceeeecccccEEcCCceEEEEEec--CCceecccceEEEcc
Confidence            349999998887543                   899999999988776532  222111110  1124577887765 5


Q ss_pred             CCCHHHHHHHHHHHHhcCCCcc
Q 042169          193 KRHPILFDFLQEFTTTFDGSKW  214 (286)
Q Consensus       193 ~~hp~l~~~l~~~~~~~~~~~~  214 (286)
                      .+||.+.+-++.+....++..+
T Consensus       267 snHPALl~GL~iMhsK~da~PY  288 (335)
T PRK15383        267 SEHPALIKGLEIMHSKPYGDPY  288 (335)
T ss_pred             CCCHHHHhhhHHhhcCCCCCcc
Confidence            6999999999999988766543

>PRK15384 type III secretion system protein; Provisional

Probab=94.93  E-value=0.057  Score=48.06  Aligned_cols=91  Identities=22%  Similarity=0.336  Sum_probs=58.8

Q ss_pred             hHhHHHHHHHHHhCc-------------------EEEeCCeeeeccchhhhh--hhccccccccCCCcccccceEEEe-e
Q 042169          135 LSDLIRLAVLYKYGG-------------------VYLDTDFVILKDFKGLRN--AIGAQGVDQVTHKWTTLNGAAMVF-D  192 (286)
Q Consensus       135 ~SD~~R~~lL~~~GG-------------------iYlD~Dv~~~rpl~~l~~--~~~~~~~~~~~~~~~~l~n~~~~~-~  192 (286)
                      -=|++|-+.|.+-|+                   ||+|+|++++.-+.-+..  -++..-...  .+...+.||+++. +
T Consensus       186 wFDF~RNlalLK~g~~F~e~~k~gch~is~~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~--~~~~slENg~I~VnR  263 (336)
T PRK15384        186 WFDFYRNMAMLKAGQLFLEADKVGCYDLSTNSGCIYLDADMIITEKLGGIYIPDGIAVHVERI--DGRASMENGIIAVDR  263 (336)
T ss_pred             hhHHHHHHHHHhccceeeecCCCCCcccCCCCceEEeeccceeecccccEEcCCceEEEEEec--CCceecccceEEEcc
Confidence            349999998887543                   799999999988776532  222111110  1124577887765 5


Q ss_pred             CCCHHHHHHHHHHHHhcCCCcccccccHHHHHHHHHHcC
Q 042169          193 KRHPILFDFLQEFTTTFDGSKWGHNGPYLLTRVIQRVGN  231 (286)
Q Consensus       193 ~~hp~l~~~l~~~~~~~~~~~~~~~GP~~lt~~~~~~~~  231 (286)
                      .+||.+.+-++.+....++..+.    .-+..-++++.+
T Consensus       264 snHPALl~GL~iMhsK~da~PY~----Dgl~kGik~~Fn  298 (336)
T PRK15384        264 NNHPALLAGLEIMHTKFDADPYS----DGVCNGIRKHFN  298 (336)
T ss_pred             CCCHHHHhhHHHhhcCCCCCcch----hhhhhhHHhhcC
Confidence            69999999999999887665432    123344555543

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family

Probab=93.90  E-value=0.18  Score=46.18  Aligned_cols=103  Identities=15%  Similarity=0.171  Sum_probs=60.8

Q ss_pred             HHHHHHHH--HhC-cEEEeCCeeeeccchhhhhhh-ccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHHhcCCCc
Q 042169          138 LIRLAVLY--KYG-GVYLDTDFVILKDFKGLRNAI-GAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTTFDGSK  213 (286)
Q Consensus       138 ~~R~~lL~--~~G-GiYlD~Dv~~~rpl~~l~~~~-~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~~~~~~~  213 (286)
                      +.|+.+..  +|- =+|+|+|++|+++++.+.+.- ......+.  .+-.+|+|+|...|..-...++++.+.+......
T Consensus        81 ~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~--~~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~  158 (278)
T cd06914          81 LTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPR--AYWKFASHLMVIKPSKEAFKELMTEILPAYLNKK  158 (278)
T ss_pred             HHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeec--CcceecceeEEEeCCHHHHHHHHHHHHHhcccCC
Confidence            66665543  232 589999999999999976421 10000011  1126899999999998888888888776432110


Q ss_pred             cccccc--HHHHHHHHHHcCCCCCcEEEecCCcc
Q 042169          214 WGHNGP--YLLTRVIQRVGNTPGYNLTILGLKAF  245 (286)
Q Consensus       214 ~~~~GP--~~lt~~~~~~~~~~~~~~~i~p~~~F  245 (286)
                         .++  .++..++....+...-.+.++|...+
T Consensus       159 ---~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y  189 (278)
T cd06914         159 ---NEYDMDLINEEFYNSKQLFKPSVLVLPHRQY  189 (278)
T ss_pred             ---CCCChHHHHHHHhCCccccCcceEEcCcccc
Confidence               112  45555554432111124778887644

N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

Probab=93.03  E-value=0.15  Score=45.40  Aligned_cols=57  Identities=21%  Similarity=0.275  Sum_probs=41.5

Q ss_pred             cEEEeCCeeeeccchhhhhh---hccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHHh
Q 042169          149 GVYLDTDFVILKDFKGLRNA---IGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTT  208 (286)
Q Consensus       149 GiYlD~Dv~~~rpl~~l~~~---~~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~~  208 (286)
                      =+|+|+|++++++++++.+.   ++.... .  .....+|.|+|...++......+++.+.+.
T Consensus        93 vlylD~D~~v~~~i~~Lf~~~~~~~a~~d-~--~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~  152 (240)
T cd02537          93 VVFLDADTLVLRNIDELFDLPGEFAAAPD-C--GWPDLFNSGVFVLKPSEETFNDLLDALQDT  152 (240)
T ss_pred             EEEEeCCeeEccCHHHHhCCCCceeeecc-c--CccccccceEEEEcCCHHHHHHHHHHHhcc
Confidence            38999999999999998653   222111 1  001468999999999988888888887754

Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional

Probab=92.96  E-value=0.38  Score=45.19  Aligned_cols=111  Identities=14%  Similarity=0.182  Sum_probs=66.3

Q ss_pred             eEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCC--eEEEEeCccCCccccccchhhhhc-CccEEEECCChhhhhccCchH
Q 042169           37 TQFFMIWFSPARTFGPRDFLAVDTLMKANPQS--CLVLISRSLDTRRGYKILKPLLDR-GFKILTVTPDLPSLVKDTPAE  113 (286)
Q Consensus        37 ~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~--~V~l~~~~~~~~~~~~~~~~l~~~-~~~v~~~~~d~~~~~~~tP~~  113 (286)
                      ..+|.+-..+..-++. -.-+|.|...+||+.  ++.|+++.... ..-..+..+.+. +.+|.+..+|...+ .+.|. 
T Consensus        24 ~~i~Iv~~~D~ny~~~-~~vsi~Sil~nn~~~~~~f~Il~~~is~-e~~~~l~~l~~~~~~~i~~~~id~~~~-~~~~~-   99 (334)
T PRK15171         24 NSLDIAYGIDKNFLFG-CGVSIASVLLNNPDKSLVFHVFTDYISD-ADKQRFSALAKQYNTRINIYLINCERL-KSLPS-   99 (334)
T ss_pred             CceeEEEECcHhhHHH-HHHHHHHHHHhCCCCCEEEEEEeCCCCH-HHHHHHHHHHHhcCCeEEEEEeCHHHH-hCCcc-
Confidence            5688888877755433 455699999999985  56777765421 111233344443 34566655554332 22221 


Q ss_pred             HHHHhhhcCccCCCCCCchhhhHhHHHHHH---HH-HhC-cEEEeCCeeeeccchhhhh
Q 042169          114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAV---LY-KYG-GVYLDTDFVILKDFKGLRN  167 (286)
Q Consensus       114 ~w~~~~~~g~~~~~~~~~~a~~SD~~R~~l---L~-~~G-GiYlD~Dv~~~rpl~~l~~  167 (286)
                             ..         ....+=++|+.+   |- .+. =+|||+|++|.+++++|.+
T Consensus       100 -------~~---------~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~  142 (334)
T PRK15171        100 -------TK---------NWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELID  142 (334)
T ss_pred             -------cC---------cCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHh
Confidence                   00         124566778844   32 233 4899999999999998753

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=90.61  E-value=0.72  Score=40.88  Aligned_cols=136  Identities=18%  Similarity=0.230  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHCC--CCeEEEEeCccCCccccccchhhhhc-CccEEEECCChhhhhccCchHHHHHhhhcCccCCCCCCc
Q 042169           55 FLAVDTLMKANP--QSCLVLISRSLDTRRGYKILKPLLDR-GFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPL  131 (286)
Q Consensus        55 ~caIeS~~~~~P--~~~V~l~~~~~~~~~~~~~~~~l~~~-~~~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~~  131 (286)
                      ..++.|..++++  ...+.+++++... .....++.+... +.+|.++.++..... ..|.       ..+     .   
T Consensus        16 ~~~l~Sl~~~~~~~~~~~~il~~~is~-~~~~~L~~~~~~~~~~i~~~~i~~~~~~-~~~~-------~~~-----~---   78 (248)
T cd04194          16 AVTIKSILANNSKRDYDFYILNDDISE-ENKKKLKELLKKYNSSIEFIKIDNDDFK-FFPA-------TTD-----H---   78 (248)
T ss_pred             HHHHHHHHhcCCCCceEEEEEeCCCCH-HHHHHHHHHHHhcCCeEEEEEcCHHHHh-cCCc-------ccc-----c---
Confidence            445899999999  5677777765321 111223333322 446666655433221 1110       001     1   


Q ss_pred             hhhhHhHHHHHHHHHhC----cEEEeCCeeeeccchhhhhh------hccccccc------------cCCCcccccceEE
Q 042169          132 SIHLSDLIRLAVLYKYG----GVYLDTDFVILKDFKGLRNA------IGAQGVDQ------------VTHKWTTLNGAAM  189 (286)
Q Consensus       132 ~a~~SD~~R~~lL~~~G----GiYlD~Dv~~~rpl~~l~~~------~~~~~~~~------------~~~~~~~l~n~~~  189 (286)
                       -..+-+.|+.+-....    =+|+|+|++++++++++.+.      ++......            .......+|.|||
T Consensus        79 -~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~  157 (248)
T cd04194          79 -ISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVL  157 (248)
T ss_pred             -ccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecch
Confidence             1245677888777555    58999999999999987542      12111000            0011246788888


Q ss_pred             EeeCC----CHHHHHHHHHHHHh
Q 042169          190 VFDKR----HPILFDFLQEFTTT  208 (286)
Q Consensus       190 ~~~~~----hp~l~~~l~~~~~~  208 (286)
                      .....    ..+..++++.+.+.
T Consensus       158 l~nl~~~r~~~~~~~~~~~~~~~  180 (248)
T cd04194         158 LINLKKWREENITEKLLELIKEY  180 (248)
T ss_pred             heeHHHHHHhhhHHHHHHHHHhC
Confidence            87654    34555666655543

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis

Probab=86.54  E-value=2.5  Score=38.67  Aligned_cols=30  Identities=27%  Similarity=0.369  Sum_probs=22.8

Q ss_pred             HHHHHHHHH----hC-cEEEeCCeeeeccchhhhh
Q 042169          138 LIRLAVLYK----YG-GVYLDTDFVILKDFKGLRN  167 (286)
Q Consensus       138 ~~R~~lL~~----~G-GiYlD~Dv~~~rpl~~l~~  167 (286)
                      ++|+.+-.-    +. =+|+|+|++|..++.+|.+
T Consensus        85 y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~  119 (280)
T cd06431          85 LMKLVLTEALPSDLEKVIVLDTDITFATDIAELWK  119 (280)
T ss_pred             HHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHH
Confidence            368876332    33 4899999999999998754

The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=85.26  E-value=0.94  Score=39.34  Aligned_cols=72  Identities=22%  Similarity=0.272  Sum_probs=39.4

Q ss_pred             hHhHHHHHHHHH---hC-cEEEeCCeeeeccchhhhhh------hccccc---------------cccCCCcccccceEE
Q 042169          135 LSDLIRLAVLYK---YG-GVYLDTDFVILKDFKGLRNA------IGAQGV---------------DQVTHKWTTLNGAAM  189 (286)
Q Consensus       135 ~SD~~R~~lL~~---~G-GiYlD~Dv~~~rpl~~l~~~------~~~~~~---------------~~~~~~~~~l~n~~~  189 (286)
                      .+=+.|+.+-..   ++ =+|+|+|++++++++.+.+.      ++....               .........+++|+|
T Consensus        84 ~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~  163 (250)
T PF01501_consen   84 PATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVM  163 (250)
T ss_dssp             GGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEE
T ss_pred             HHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCcEE
Confidence            334456555443   33 39999999999999987541      111111               001122367899999


Q ss_pred             EeeCCCHHHHHHHHHHH
Q 042169          190 VFDKRHPILFDFLQEFT  206 (286)
Q Consensus       190 ~~~~~hp~l~~~l~~~~  206 (286)
                      .+.+...--..+.+.+.
T Consensus       164 l~~~~~~~~~~~~~~~~  180 (250)
T PF01501_consen  164 LFNPSKWRKENILQKLI  180 (250)
T ss_dssp             EEEHHHHHHHHHHHHHH
T ss_pred             EEeechhhhhhhhhhhh
Confidence            99876554333443333

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function

Probab=83.68  E-value=6.8  Score=35.41  Aligned_cols=70  Identities=26%  Similarity=0.339  Sum_probs=42.2

Q ss_pred             hhHhHHHHHH---HHHhC-cEEEeCCeeeeccchhhhhh-hccccccccCCCcccccceEEEeeC----CCHHHHHHHHH
Q 042169          134 HLSDLIRLAV---LYKYG-GVYLDTDFVILKDFKGLRNA-IGAQGVDQVTHKWTTLNGAAMVFDK----RHPILFDFLQE  204 (286)
Q Consensus       134 ~~SD~~R~~l---L~~~G-GiYlD~Dv~~~rpl~~l~~~-~~~~~~~~~~~~~~~l~n~~~~~~~----~hp~l~~~l~~  204 (286)
                      ..+-++|+.+   |-..+ =+|||+|++|.+++++|.+. ++-......   ...++.|||....    .+-+...+++.
T Consensus        98 s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav---~dyfNsGV~linl~~wr~~~i~~~~~~~  174 (257)
T cd06429          98 SLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAV---ETSWNPGVNVVNLTEWRRQNVTETYEKW  174 (257)
T ss_pred             CHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEE---hhhcccceEEEeHHHHHhccHHHHHHHH
Confidence            4567888877   33333 49999999999999998642 110000000   0157888888763    34455555554


Q ss_pred             HH
Q 042169          205 FT  206 (286)
Q Consensus       205 ~~  206 (286)
                      +.
T Consensus       175 ~~  176 (257)
T cd06429         175 ME  176 (257)
T ss_pred             HH
Confidence            44

A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []

Probab=82.92  E-value=7.9  Score=33.26  Aligned_cols=112  Identities=16%  Similarity=0.152  Sum_probs=64.5

Q ss_pred             hhhHhHHHHHHHHHhCcEEEeCCeeeeccchhhh-h---hhcccccccc----CCCcccccceEEEeeCCCHHHHHHHHH
Q 042169          133 IHLSDLIRLAVLYKYGGVYLDTDFVILKDFKGLR-N---AIGAQGVDQV----THKWTTLNGAAMVFDKRHPILFDFLQE  204 (286)
Q Consensus       133 a~~SD~~R~~lL~~~GGiYlD~Dv~~~rpl~~l~-~---~~~~~~~~~~----~~~~~~l~n~~~~~~~~hp~l~~~l~~  204 (286)
                      ..+..+++-.+-.-+-=+++|+|++.+|+..++. +   .+.+......    ......+|.|++.+++ +|-.+++++.
T Consensus        53 ~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~-t~~~~~~~~~  131 (212)
T PF03407_consen   53 WLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRP-TPRTIAFLED  131 (212)
T ss_pred             HHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEec-CHHHHHHHHH
Confidence            4667777655555555799999999999876654 2   1222221100    1112346788888887 5555555555


Q ss_pred             HHHhcCCCcccccccHHHHHHHHHHcCC-CCCcEEEecCCccc
Q 042169          205 FTTTFDGSKWGHNGPYLLTRVIQRVGNT-PGYNLTILGLKAFY  246 (286)
Q Consensus       205 ~~~~~~~~~~~~~GP~~lt~~~~~~~~~-~~~~~~i~p~~~F~  246 (286)
                      ..+...... ...--.++..++.+.... .+..+.++|...|-
T Consensus       132 w~~~~~~~~-~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~  173 (212)
T PF03407_consen  132 WLERMAESP-GCWDQQAFNELLREQAARYGGLRVRFLPPSLFP  173 (212)
T ss_pred             HHHHHHhCC-CcchHHHHHHHHHhcccCCcCcEEEEeCHHHee
Confidence            555432110 111336777777765321 23478999998884

>PLN00176 galactinol synthase

Probab=82.80  E-value=2.2  Score=40.16  Aligned_cols=149  Identities=17%  Similarity=0.212  Sum_probs=77.5

Q ss_pred             EEEEEEc-CCCCCCCHHHHHHHHHHHHHCCCCeEEEE-eCccCCccccccchhhhhcCccEEEECCChhhhhccCchHHH
Q 042169           38 QFFMIWF-SPARTFGPRDFLAVDTLMKANPQSCLVLI-SRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAW  115 (286)
Q Consensus        38 ~i~~~W~-s~~~~l~~r~~caIeS~~~~~P~~~V~l~-~~~~~~~~~~~~~~~l~~~~~~v~~~~~d~~~~~~~tP~~~w  115 (286)
                      .-+.+=. ++..-++-.... ..|..+++..+.++++ +.+.+.    +..+.|.+.+..|+-+.+     +.  |.+. 
T Consensus        23 ~AyVT~L~~n~~Y~~Ga~vL-~~SLr~~~s~~~lVvlVt~dVp~----e~r~~L~~~g~~V~~V~~-----i~--~~~~-   89 (333)
T PLN00176         23 RAYVTFLAGNGDYVKGVVGL-AKGLRKVKSAYPLVVAVLPDVPE----EHRRILVSQGCIVREIEP-----VY--PPEN-   89 (333)
T ss_pred             eEEEEEEecCcchHHHHHHH-HHHHHHhCCCCCEEEEECCCCCH----HHHHHHHHcCCEEEEecc-----cC--Cccc-
Confidence            3444433 344455554444 7888888888887665 444321    112334444555543321     10  1111 


Q ss_pred             HHhhhcCccCCCCCCchhhhHhHHHHHHHHHhC-cEEEeCCeeeeccchhhhhh----hccccc-------c--------
Q 042169          116 LKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKYG-GVYLDTDFVILKDFKGLRNA----IGAQGV-------D--------  175 (286)
Q Consensus       116 ~~~~~~g~~~~~~~~~~a~~SD~~R~~lL~~~G-GiYlD~Dv~~~rpl~~l~~~----~~~~~~-------~--------  175 (286)
                       +    ..+.. .. +....+ -+|+.-|.+|- =+|||+|+++++++++|.+.    ++.-..       .        
T Consensus        90 -~----~~~~~-~~-~~i~~t-Kl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~  161 (333)
T PLN00176         90 -Q----TQFAM-AY-YVINYS-KLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIG  161 (333)
T ss_pred             -c----ccccc-ch-hhhhhh-hhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEeccccccccccccccccc
Confidence             0    00000 00 011122 24444456665 69999999999999998642    100000       0        


Q ss_pred             -----c---------cCCCcccccceEEEeeCCCHHHHHHHHHHHH
Q 042169          176 -----Q---------VTHKWTTLNGAAMVFDKRHPILFDFLQEFTT  207 (286)
Q Consensus       176 -----~---------~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~  207 (286)
                           +         +......+|.|+|...|..-....+++.+..
T Consensus       162 ~c~~~~~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~  207 (333)
T PLN00176        162 YCQQCPDKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKI  207 (333)
T ss_pred             ccccchhhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHh
Confidence                 0         0001136899999999988777888876653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
2vk9_A	551	Alpha-toxin; glycosyltransferase; 2.85A {Clostridi	99.4
2bvl_A	543	Toxin B; glycosyltransferase; HET: GLC UDP TBR; 2.	99.3
4dmv_A	556	Toxin A, TCDA; transferase; 1.50A {Clostridium dif	99.1
3jsz_A	525	LGT1, putative uncharacterized protein; glucosyltr	96.67
3tzt_A	276	Glycosyl transferase family 8; structural genomics	94.21
3u2u_A	263	Glycogenin-1, GN-1, GN1; structural genomics, stru	92.37
1ll2_A	333	Glycogenin-1; protein-substrate complex, beta-alph	91.76

>2vk9_A Alpha-toxin; glycosyltransferase; 2.85A {Clostridium novyi} SCOP: c.68.1.22

Probab=99.40  E-value=8.2e-13  Score=126.45  Aligned_cols=40  Identities=10%  Similarity=0.169  Sum_probs=35.9

Q ss_pred             cceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           35 CATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        35 ~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      .+..||+||+||.  +|..+.-||+||++++||++|++|.++
T Consensus        96 IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~  135 (551)
T 2vk9_A           96 ASKNLSFIWIGGP--ISDQSLEYYNMWKMFNKDYNIRLFYDK  135 (551)
T ss_dssp             CCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             CCcceEEEEcCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence            6689999999998  578888779999999999999999864

>2bvl_A Toxin B; glycosyltransferase; HET: GLC UDP TBR; 2.2A {Clostridium difficile} SCOP: c.68.1.22 PDB: 2bvm_A* 2vkh_A* 2vkd_A* 2vl8_A*

Probab=99.30  E-value=4.5e-12  Score=121.17  Aligned_cols=40  Identities=8%  Similarity=0.209  Sum_probs=35.8

Q ss_pred             cceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           35 CATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        35 ~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      .+..||+||+||.  +|..+.-||+||++++||+++++|.++
T Consensus        94 IPKiIHyiW~Gg~--~P~~~~~cI~sWkk~~PDYei~lW~D~  133 (543)
T 2bvl_A           94 VEKNLHFVWIGGQ--INDTAINYINQWKDVNSDYNVNVFYDS  133 (543)
T ss_dssp             CCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             CCCceEEEEeCCC--CCHHHHHHHHHHHHHCcCCEEEEEecc
Confidence            5788999999998  578888789999999999999999864

>4dmv_A Toxin A, TCDA; transferase; 1.50A {Clostridium difficile} PDB: 4dmw_A* 3ss1_A 3srz_A

Probab=99.10  E-value=1.1e-10  Score=110.80  Aligned_cols=41  Identities=10%  Similarity=0.186  Sum_probs=35.9

Q ss_pred             CcceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           34 QCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        34 ~~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      ..+..||+||+||.  .|..+.-||+||++.+||++|++|.+.
T Consensus       107 ~IPKiIHy~W~Gg~--~P~~~~kcI~sWkk~~PDYeI~lW~Ds  147 (556)
T 4dmv_A          107 PVEKNLHFVWIGGE--VSDIALEYIKQWADINAEYNIKLWYDS  147 (556)
T ss_dssp             ECCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             ccCCceEEEecCCC--CCHHHHHHHHHHHHHCCCCeEEEEeCc
Confidence            46788999999986  577777779999999999999999874

>3jsz_A LGT1, putative uncharacterized protein; glucosyltransferase, legionnaire'S disease, legionella pneum transferase; HET: MSE UPG; 1.70A {Legionella pneumophila} PDB: 2wzg_A* 3jt1_A* 2wzf_A*

Probab=96.67  E-value=0.0033  Score=57.66  Aligned_cols=117  Identities=24%  Similarity=0.269  Sum_probs=75.8

Q ss_pred             ceEEEEEEcCCCC--CCCHHHHHHHHHHHHHCCCCeEEEE-eCccCCccccccchhhhhcCccEEEECCChhhhhccCch
Q 042169           36 ATQFFMIWFSPAR--TFGPRDFLAVDTLMKANPQSCLVLI-SRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPA  112 (286)
Q Consensus        36 ~~~i~~~W~s~~~--~l~~r~~caIeS~~~~~P~~~V~l~-~~~~~~~~~~~~~~~l~~~~~~v~~~~~d~~~~~~~tP~  112 (286)
                      .+..+=+|+|..+  ..|..++-.++-++.+||+.++.++ +.+.-+..+..-+++|.+. .++..+.+|  +.-.+.++
T Consensus       132 tn~~~~IWFSn~P~~fMp~e~q~~Lle~re~nPG~~i~LVYsStlLn~~a~~ql~~fake-n~IsllDid--s~k~e~~L  208 (525)
T 3jsz_A          132 TNVQTSIWFSIKPELFMPSKQQEALKRRREQYPGCKIRLIYSSSLLNPEANRQMKAFAKK-QNISLIDID--SVKTDSPL  208 (525)
T ss_dssp             SSEEEEECCCSSTTCSSCHHHHHHHHHHHHHCTTCEEEEEECSTTSCHHHHHHHHHHHHH-TTEEEEEGG--GCCCCCTH
T ss_pred             CCceEEEEEeCChhHhccHHHHHHHHHHHhhCCCCeEEEEeehhhcCHHHHHHHHHHHHh-cCceEeehh--hhcchHHH
Confidence            3455678999876  3677788888889999999877555 4443333333334555553 367766444  43367788


Q ss_pred             HHHHHhhhcCccCCCCCCchhhhHhHHHHHH-HHHhCcEEEeCCeeee
Q 042169          113 EAWLKKIKNGKIDPGKNPLSIHLSDLIRLAV-LYKYGGVYLDTDFVIL  159 (286)
Q Consensus       113 ~~w~~~~~~g~~~~~~~~~~a~~SD~~R~~l-L~~~GGiYlD~Dv~~~  159 (286)
                      ...++.=.+..-.++.   .|..||++|..- +|.+ |.|.|.|+=+-
T Consensus       209 ynl~k~EL~nLg~GGN---pAaASDivRWlspv~~~-gtYtDfD~PvD  252 (525)
T 3jsz_A          209 YPLIKAELANLGMGGN---PAAASDLCRWIPELFNE-GFYVDIDLPVD  252 (525)
T ss_dssp             HHHHHHHHHTTTTTCC---HHHHHHHHTTCTTTCSS-EEEECTTCCBC
T ss_pred             HHHHHHHHHhccCCCC---HHHHHHHHHhhHHhccc-Cceeeeecccc
Confidence            8887762211112333   589999999764 4444 99999998443

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=94.21  E-value=0.097  Score=46.33  Aligned_cols=111  Identities=14%  Similarity=0.130  Sum_probs=60.7

Q ss_pred             eEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCC--eEEEEeCccCCccccccchhhhh-cCccEEEECCChhhhhccCchH
Q 042169           37 TQFFMIWFSPARTFGPRDFLAVDTLMKANPQS--CLVLISRSLDTRRGYKILKPLLD-RGFKILTVTPDLPSLVKDTPAE  113 (286)
Q Consensus        37 ~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~--~V~l~~~~~~~~~~~~~~~~l~~-~~~~v~~~~~d~~~~~~~tP~~  113 (286)
                      +.||.+=.++..-+.. -..++.|..+++++.  .+.+++++.+.. ....++.+.+ .+.+|.++.++-. .+++.|. 
T Consensus         4 m~i~I~~~~d~~Y~~~-~~v~i~Sl~~~~~~~~~~~~il~~~is~~-~~~~L~~~~~~~~~~i~~~~~~~~-~~~~~~~-   79 (276)
T 3tzt_A            4 MADALLLTLDENYIPQ-MKVLMTSIYINNPGRIFDVYLIHSRISED-KLKDLGEDLKKFSYTLYPIRATDD-LFSFAKV-   79 (276)
T ss_dssp             -CEEEEEECCGGGHHH-HHHHHHHHHHHSTTCCEEEEEEESCCCHH-HHHHHHHHHHTTTCEEEEEECC-----------
T ss_pred             eeEEEEEEeCHhHHHH-HHHHHHHHHHhCCCCceEEEEEeCCCCHH-HHHHHHHHHHHcCCEEEEEEeCHH-HHhcCcc-
Confidence            4577775555544433 456699999999964  455666654321 1122333333 2345666655431 2222110 


Q ss_pred             HHHHhhhcCccCCCCCCchhhhHhHHHHHHHHHh----C-cEEEeCCeeeeccchhhhh
Q 042169          114 AWLKKIKNGKIDPGKNPLSIHLSDLIRLAVLYKY----G-GVYLDTDFVILKDFKGLRN  167 (286)
Q Consensus       114 ~w~~~~~~g~~~~~~~~~~a~~SD~~R~~lL~~~----G-GiYlD~Dv~~~rpl~~l~~  167 (286)
                             +.     .    -..+-+.|+.+-.-.    . =+|+|+|+++++++++|.+
T Consensus        80 -------~~-----~----~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~  122 (276)
T 3tzt_A           80 -------TD-----R----YPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLR  122 (276)
T ss_dssp             --------------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHT
T ss_pred             -------cc-----c----cCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhh
Confidence                   00     1    124567888766443    3 4999999999999998754

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A

Probab=92.37  E-value=0.17  Score=44.70  Aligned_cols=57  Identities=16%  Similarity=0.222  Sum_probs=42.5

Q ss_pred             cEEEeCCeeeeccchhhhhh--hccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHHh
Q 042169          149 GVYLDTDFVILKDFKGLRNA--IGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTTT  208 (286)
Q Consensus       149 GiYlD~Dv~~~rpl~~l~~~--~~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~~  208 (286)
                      =+|+|+|++++++++++.+.  ++....   .+-...+|.|+|...|......++++.+.+.
T Consensus        99 vlylD~D~~v~~~~~~Lf~~~~~aA~~d---~~~~~~fNsGv~li~p~~~~~~~l~~~~~~~  157 (263)
T 3u2u_A           99 CVFMDADTLVLANIDDLFDREELSAAPD---PGWPDCFNSGVFVYQPSVETYNQLLHLASEQ  157 (263)
T ss_dssp             EEEECTTEEECSCCGGGGGSCSSEEEEC---TTSTTSEEEEEEEECCCHHHHHHHHHHHHHH
T ss_pred             EEEEcCCEeeccCHHHHhCCCcceEecc---CCCCccccCeEEEEcccHHHHHHHHHHHHhc
Confidence            69999999999999998653  222211   1112568999999999988888888887753

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*

Probab=91.76  E-value=0.21  Score=45.51  Aligned_cols=130  Identities=16%  Similarity=0.157  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHCCCCeEEEE-eCccCCccccccchhhhhcCccEEEECCChhhhhccCchHHHHHhhhcCccCCCCCCchh
Q 042169           55 FLAVDTLMKANPQSCLVLI-SRSLDTRRGYKILKPLLDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSI  133 (286)
Q Consensus        55 ~caIeS~~~~~P~~~V~l~-~~~~~~~~~~~~~~~l~~~~~~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~~~a  133 (286)
                      ..++.|..+++++..++++ +++.+.    ...+.|.+.+..|..+.+ +..-   .+ ..+ ....+.          .
T Consensus        20 ~vl~~SL~~~~s~~~l~vlv~~~is~----~~~~~L~~~~~~v~~v~~-l~~~---~~-~~~-~~~~~~----------~   79 (333)
T 1ll2_A           20 LVLGSSLKQHRTSRRLAVLTTPQVSD----TMRKALEIVFDEVITVDI-LDSG---DS-AHL-TLMKRP----------E   79 (333)
T ss_dssp             HHHHHHHHHTTCCSEEEEEECTTSCH----HHHHHHHHHCSEEEECCT-TSTT---ST-THH-HHHHCG----------G
T ss_pred             HHHHHHHHHhCCCCCEEEEEcCCCCH----HHHHHHHHhCCEEEEEee-cCCc---ch-hhc-cccccc----------c
Confidence            3458999999999988665 333211    122233333445554432 1100   01 000 000000          0


Q ss_pred             hhHhHHHHHHHH--HhC-cEEEeCCeeeeccchhhhhh--hccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHH
Q 042169          134 HLSDLIRLAVLY--KYG-GVYLDTDFVILKDFKGLRNA--IGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTT  207 (286)
Q Consensus       134 ~~SD~~R~~lL~--~~G-GiYlD~Dv~~~rpl~~l~~~--~~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~  207 (286)
                      ...=+.|+.+..  .|. =+|||+|+++++++++|.+.  ++.-..   .+-...+|+|||...|.......+++.+.+
T Consensus        80 ~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d---~~~~~~fNsGvmlin~~~~~~~~l~~~~~~  155 (333)
T 1ll2_A           80 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPD---PGWPDCFNSGVFVYQPSVETYNQLLHVASE  155 (333)
T ss_dssp             GHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEEC---SSSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEec---CCCCcceeeeEEEEeCCHHHHHHHHHHHHh
Confidence            123355555442  222 39999999999999998753  222111   111257899999999988888888877664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d2vk9a1	540	c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi	3e-04
d2bvla1	542	c.68.1.22 (A:1-542) Toxin B {Clostridium difficile	4e-04

>d2vk9a1 c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi [TaxId: 1542]} Length = 540

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Alpha-toxin
species: Clostridium novyi [TaxId: 1542]

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 14/21 (66%), Positives = 18/21 (85%)

Query: 136 SDLIRLAVLYKYGGVYLDTDF 156
           SD++R+A+L KYGGVY D DF
Sbjct: 266 SDILRIAILKKYGGVYCDLDF 286

>d2bvla1 c.68.1.22 (A:1-542) Toxin B {Clostridium difficile [TaxId: 1496]} Length = 542

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Toxin B
species: Clostridium difficile [TaxId: 1496]

 Score = 39.5 bits (92), Expect = 4e-04
 Identities = 10/21 (47%), Positives = 16/21 (76%)

Query: 136 SDLIRLAVLYKYGGVYLDTDF 156
           SD++R++ L + GG+YLD D 
Sbjct: 269 SDILRISALKEIGGMYLDVDM 289

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d2bvla1	542	Toxin B {Clostridium difficile [TaxId: 1496]}	98.98
d2vk9a1	540	Alpha-toxin {Clostridium novyi [TaxId: 1542]}	98.82
d1ll2a_	263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	96.37
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	94.46

>d2bvla1 c.68.1.22 (A:1-542) Toxin B {Clostridium difficile [TaxId: 1496]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Toxin B
species: Clostridium difficile [TaxId: 1496]

Probab=98.98  E-value=6.8e-10  Score=104.67  Aligned_cols=41  Identities=7%  Similarity=0.202  Sum_probs=36.7

Q ss_pred             CcceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           34 QCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        34 ~~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      +.+..||++|.+|.  +|..+.-+|..|.+.+||+++.+|.++
T Consensus        93 ~I~K~IH~IWIgG~--~Pd~~~~YI~~wl~~~~dy~~~lW~D~  133 (542)
T d2bvla1          93 PVEKNLHFVWIGGQ--INDTAINYINQWKDVNSDYNVNVFYDS  133 (542)
T ss_dssp             ECCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             ccCCceEEEEeCCC--CCcchHHHHHHHHHHCCCCeEEEEECC
Confidence            46788999999976  689998999999999999999999774

>d2vk9a1 c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi [TaxId: 1542]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycosylating toxin catalytic domain-like
domain: Alpha-toxin
species: Clostridium novyi [TaxId: 1542]

Probab=98.82  E-value=2.1e-09  Score=100.66  Aligned_cols=41  Identities=10%  Similarity=0.149  Sum_probs=36.4

Q ss_pred             CcceEEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCc
Q 042169           34 QCATQFFMIWFSPARTFGPRDFLAVDTLMKANPQSCLVLISRS   76 (286)
Q Consensus        34 ~~~~~i~~~W~s~~~~l~~r~~caIeS~~~~~P~~~V~l~~~~   76 (286)
                      ..+..||++|.+|.  +|..+.-.|+-|.+.+||+++.+|-++
T Consensus        94 ~veKniHfIWIaG~--ppd~~~~YIk~wl~ty~dy~~~lW~D~  134 (540)
T d2vk9a1          94 IASKNLSFIWIGGP--ISDQSLEYYNMWKMFNKDYNIRLFYDK  134 (540)
T ss_dssp             BCCSEEEEECCSSC--CCHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred             ccccceEEEEeCCC--CCcchHHHHHHHHHhCCCCeEEEEECc
Confidence            36788999999994  689999999999999999999999654

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Glycogenin
domain: Glycogenin
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.37  E-value=0.0054  Score=51.48  Aligned_cols=126  Identities=15%  Similarity=0.117  Sum_probs=72.5

Q ss_pred             HHHHHHHHCCCCeEEEEe-CccCCccccccchhhhhcCccEEEECC-ChhhhhccCchHHHHHhhhcCccCCCCCCchhh
Q 042169           57 AVDTLMKANPQSCLVLIS-RSLDTRRGYKILKPLLDRGFKILTVTP-DLPSLVKDTPAEAWLKKIKNGKIDPGKNPLSIH  134 (286)
Q Consensus        57 aIeS~~~~~P~~~V~l~~-~~~~~~~~~~~~~~l~~~~~~v~~~~~-d~~~~~~~tP~~~w~~~~~~g~~~~~~~~~~a~  134 (286)
                      .+.|..+++|.+.++++. ++.. .   ...+.|.+.+..+..+.. +...-.   . ..  . .. .         .-.
T Consensus        22 l~~SL~~~~~~~~~vvl~~~~i~-~---~~~~~L~~~~~~~~~v~~i~~~~~~---~-~~--~-~~-~---------~~~   80 (263)
T d1ll2a_          22 LGSSLKQHRTSRRLAVLTTPQVS-D---TMRKALEIVFDEVITVDILDSGDSA---H-LT--L-MK-R---------PEL   80 (263)
T ss_dssp             HHHHHHHTTCCSEEEEEECTTSC-H---HHHHHHHHHCSEEEECCTTSTTSTT---H-HH--H-HH-C---------GGG
T ss_pred             HHHHHHHHCCCCCEEEEECCCCC-H---HHHHHHHHhCCcceeEEeecCcchh---h-hh--h-hc-c---------ccc
Confidence            488999999999887764 4321 1   122334444445444321 221111   0 01  0 00 1         123


Q ss_pred             hHhHHHHHHHHHhCc----EEEeCCeeeeccchhhhhh--hccccccccCCCcccccceEEEeeCCCHHHHHHHHHHHH
Q 042169          135 LSDLIRLAVLYKYGG----VYLDTDFVILKDFKGLRNA--IGAQGVDQVTHKWTTLNGAAMVFDKRHPILFDFLQEFTT  207 (286)
Q Consensus       135 ~SD~~R~~lL~~~GG----iYlD~Dv~~~rpl~~l~~~--~~~~~~~~~~~~~~~l~n~~~~~~~~hp~l~~~l~~~~~  207 (286)
                      .+-+.|+.+.. ...    +|||+|+++++++++|.+.  .+....   ......+++|+|...|+--..+.+.+.+.+
T Consensus        81 ~~ty~Kl~i~~-l~~ydkvlYLDaD~lv~~~id~Lf~~~~~~a~~~---~~~~~~~nsGv~l~~p~~~~~~~i~~~~~~  155 (263)
T d1ll2a_          81 GVTLTKLHCWS-LTQYSKCVFMDADTLVLANIDDLFEREELSAAPD---PGWPDCFNSGVFVYQPSVETYNQLLHVASE  155 (263)
T ss_dssp             HHHHHHGGGGG-CTTCSEEEEECTTEEECSCCGGGGGSCSSEEEEC---SSSTTSEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHhh-hcccceEEEeCCCEEEecCHHHHhcCCccceecc---CCCcccccCCcEEECccHHHHHHHHHHHHh
Confidence            45678877643 444    9999999999999998753  222111   122356889999999987666666665554

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=94.46  E-value=0.05  Score=45.68  Aligned_cols=137  Identities=14%  Similarity=0.119  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHCCCC--eEEEEeCccCCccccccchhh-hhcCccEEEECCChhhhhccCchHHHHHhhhcCccCCCCCC
Q 042169           54 DFLAVDTLMKANPQS--CLVLISRSLDTRRGYKILKPL-LDRGFKILTVTPDLPSLVKDTPAEAWLKKIKNGKIDPGKNP  130 (286)
Q Consensus        54 ~~caIeS~~~~~P~~--~V~l~~~~~~~~~~~~~~~~l-~~~~~~v~~~~~d~~~~~~~tP~~~w~~~~~~g~~~~~~~~  130 (286)
                      -..++.|..++||+.  .+.+++++.+... ...+... ...+.+|.++.++..++. +.|..            .+.++
T Consensus        15 ~~~~i~SL~~~~~~~~~~~~il~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~-~~~~~------------~~~~s   80 (282)
T d1ga8a_          15 LCVAAKSVEAAHPDTEIRFHVLDAGISEAN-RAAVAANLRGGGGNIRFIDVNPEDFA-GFPLN------------IRHIS   80 (282)
T ss_dssp             HHHHHHHHHHHCTTSCCEEEEEESSCCHHH-HHHHHHTSGGGTTTEEEEECCGGGGT-TSCCC------------CTTCC
T ss_pred             HHHHHHHHHHHCcCCCEEEEEEcCCCCHHH-HHHHHHHHHHcCCeEEEEECCchHhc-ccccc------------ccccC
Confidence            345699999999986  4556666543210 1112222 223457777766554432 22211            11111


Q ss_pred             chhhhHhHHHHHHHH---HhC-cEEEeCCeeeeccchhhhh------hhccccccc-----------c-CCCcccccceE
Q 042169          131 LSIHLSDLIRLAVLY---KYG-GVYLDTDFVILKDFKGLRN------AIGAQGVDQ-----------V-THKWTTLNGAA  188 (286)
Q Consensus       131 ~~a~~SD~~R~~lL~---~~G-GiYlD~Dv~~~rpl~~l~~------~~~~~~~~~-----------~-~~~~~~l~n~~  188 (286)
                          .+=+.|+.+=.   .++ -+|||+|+++++++++|.+      .++......           . ......+++||
T Consensus        81 ----~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGV  156 (282)
T d1ga8a_          81 ----ITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGV  156 (282)
T ss_dssp             ----GGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEE
T ss_pred             ----HHHHHHHHHhhhCCccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhhhHHHhCCCCCCceeecce
Confidence                11245654332   233 5999999999999998753      122111100           0 01124589999


Q ss_pred             EEeeC----CCHHHHHHHHHHHHh
Q 042169          189 MVFDK----RHPILFDFLQEFTTT  208 (286)
Q Consensus       189 ~~~~~----~hp~l~~~l~~~~~~  208 (286)
                      |....    ...+...+++.+.+.
T Consensus       157 ml~n~~~~r~~~~~~~~~~~~~~~  180 (282)
T d1ga8a_         157 LLINLKKWRRHDIFKMSSEWVEQY  180 (282)
T ss_dssp             EEECHHHHTTSCHHHHHHHHHHHH
T ss_pred             eeechhhhhhhhHHHHHHHHHHhc
Confidence            98842    455677777776654