Citrus Sinensis ID: 042214

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGGKKALDKVGTGGTMRASAGSSMRDDYGGSGRSRIGFERGR
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHcHHHccccccccccccccccccccccccccccHHHHHHcccccccccHcccccHHHHHHHHHccccccccccccccccHcccccccEEEEccccccccccHHHHHHHHHHccccccccccccccEcccccccccccccccccEEEEccccc
Coil and Loop (DISEMBL)
mastgaarggevtydqrlfnqekgmdsgfatddqynvydkglftaqptlstlyrpkkdadddmyggnaDEQMEKIMktdrfkpdkgfagssersgprdrpvefekeaeeadpfglDEFLTEVEKGGKKAldkvgtggtmrasagssmrddyggsgrsrigfergr
Flexible Loop (DISEMBL)
mastgaarggevtydqRLFNQEKGMDSGFATDDQYNVYDKGLftaqptlstlyrpkkdadddmYGGNADEQMEKImktdrfkpdkgfagssersgprdrpVEFEKeaeeadpfglDEFLTEVEKGGkkaldkvgtggtmrasagssmrddyggsgrsrigfergr
Low Complexity Region (SEG)
MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGGKKALDKVGTGGTMRASAGSSMRDDYGGSGRSRIGFERGR
Disordered region (IsUnstruct)
****************************FATDDQYNVYDKGLFTAQPTLSTL*****************************************************************************************************************
Disordered Region (DISOPRED)
****************RLFNQ********ATDDQYNVYDKGLFTAQPTLSTLYRP**DADD**Y*G************************************FEKEAEEADPFGLD*************************************************
Disordered Region (DISEMBL)
**********EVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPD*************************ADPFGLDEFLTEVEKGGKKALDKVGTGGTMRASAGSSMRDDYGGSGRSRIGFERGR
Disordered Region (DISPRO)
*************YD***FNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKD****MYGGNADEQMEKI*KTD*F***K***********RDRPVEFEKEAEEADPFGLDEFLTEVEK*****************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGGKKALDKVGTGGTMRASAGSSMRDDYGGSGRSRIGFERGR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
P39736	547	Puff-specific protein Bx4	yes	no	0.727	0.219	0.496	2e-24
Q5R7R9	536	SNW domain-containing pro	yes	no	0.660	0.203	0.5	7e-24
Q13573	536	SNW domain-containing pro	yes	no	0.660	0.203	0.5	7e-24
Q1JQE0	536	SNW domain-containing pro	yes	no	0.660	0.203	0.5	9e-24
Q9CSN1	536	SNW domain-containing pro	yes	no	0.660	0.203	0.491	2e-23
Q4WEH7	579	Pre-mRNA-processing prote	yes	no	0.666	0.189	0.438	2e-16
Q5AU50	583	Pre-mRNA-processing prote	yes	no	0.654	0.185	0.425	5e-16
P0CR56	594	Pre-mRNA-processing prote	yes	no	0.703	0.195	0.377	5e-15
P0CR57	594	Pre-mRNA-processing prote	N/A	no	0.703	0.195	0.377	5e-15
Q22836	535	Uncharacterized protein T	yes	no	0.660	0.203	0.409	6e-15

>sp|P39736|BX42_DROME Puff-specific protein Bx42 OS=Drosophila melanogaster GN=Bx42 PE=1 SV=1

 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/129 (49%), Positives = 81/129 (62%), Gaps = 9/129 (6%)

Query: 6   AARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 65
           +A  GE  +DQRLFN  KGMDSG+  D+ YNVYDK    +    + +YRP K AD D YG
Sbjct: 410 SAGNGETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSNTLGAHIYRPSKQADSDNYG 469

Query: 66  GNADEQMEKIMKTDRFKPDKGFAGSSER--SGPRDRPVEFEKEAEEADPFGLDEFLTEVE 123
           G+ D     I+ T RF PDK F+G+S+   +G R  PVEFEK   E DPFGLD+FL   +
Sbjct: 470 GDLDA----IVNTKRFVPDKQFSGASKEAAAGQRSGPVEFEK---EEDPFGLDQFLNMAK 522

Query: 124 KGGKKALDK 132
           K  K+A +K
Sbjct: 523 KAPKRAEEK 531

May play a role in chromatin structure and function.
Drosophila melanogaster (taxid: 7227)

>sp|Q5R7R9|SNW1_PONAB SNW domain-containing protein 1 OS=Pongo abelii GN=SNW1 PE=2 SV=1

 Score =  109 bits (273), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 77/120 (64%), Gaps = 11/120 (9%)

Query: 9   GGEVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGG 66
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG 
Sbjct: 402 SNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGD 461

Query: 67  NADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGG 126
           +    +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ G
Sbjct: 462 D----LEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHG 512

Involved in vitamin D-mediated transcription. Can function as a splicing factor in pre-mRNA splicing.

Pongo abelii (taxid: 9601)

>sp|Q13573|SNW1_HUMAN SNW domain-containing protein 1 OS=Homo sapiens GN=SNW1 PE=1 SV=1

 Score =  109 bits (273), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 77/120 (64%), Gaps = 11/120 (9%)

Query: 9   GGEVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGG 66
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG 
Sbjct: 402 SNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGD 461

Query: 67  NADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGG 126
           +    +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ G
Sbjct: 462 D----LEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHG 512

Involved in vitamin D-mediated transcription. Can function as a splicing factor in pre-mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|Q1JQE0|SNW1_BOVIN SNW domain-containing protein 1 OS=Bos taurus GN=SNW1 PE=2 SV=1

 Score =  109 bits (272), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 76/120 (63%), Gaps = 11/120 (9%)

Query: 9   GGEVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGG 66
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +     +YRP K+ D DMYG 
Sbjct: 402 SNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYGD 461

Query: 67  NADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGG 126
           +    +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ G
Sbjct: 462 D----LEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHG 512

Involved in vitamin D-mediated transcription. Can function as a splicing factor in pre-mRNA splicing.

Bos taurus (taxid: 9913)

>sp|Q9CSN1|SNW1_MOUSE SNW domain-containing protein 1 OS=Mus musculus GN=Snw1 PE=1 SV=3

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 77/120 (64%), Gaps = 11/120 (9%)

Query: 9   GGEVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGG 66
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG 
Sbjct: 402 SNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGD 461

Query: 67  NADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGG 126
           +    +E  +KT+RF PDK F+GS  +   R+ PV+FE+     DPFGLD+FL E ++ G
Sbjct: 462 D----LEARIKTNRFVPDKEFSGSDRKQRGREGPVQFEE-----DPFGLDKFLEEAKQHG 512

Involved in vitamin D-mediated transcription. Can function as a splicing factor in pre-mRNA splicing.

Mus musculus (taxid: 10090)

>sp|Q4WEH7|PRP45_ASPFU Pre-mRNA-processing protein 45 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=prp45 PE=3 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 11/121 (9%)

Query: 10  GEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNAD 69
            E  +D RLFNQ  G+ SGF  D   N YDK LF AQ  ++++YRP+   D D   G A+
Sbjct: 441 SESMWDSRLFNQTSGLQSGFNED---NPYDKPLFAAQDAINSIYRPRAQLDVDDEEG-AE 496

Query: 70  EQMEKIMKTDRF----KPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKG 125
            +M KI KT+RF    K  +GF G++E    RD PV+FEK+    DPFG+D  + +V  G
Sbjct: 497 GEMSKIQKTNRFEVLGKAKEGFRGAAEAEA-RDGPVQFEKDT--TDPFGIDSMIADVTGG 553

Query: 126 G 126
            
Sbjct: 554 A 554

Involved in pre-mRNA splicing.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q5AU50|PRP45_EMENI Pre-mRNA-processing protein 45 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prp45 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 76/127 (59%), Gaps = 19/127 (14%)

Query: 8   RGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD-DDMYGG 66
           +  E  +D RLFNQ  G+ +GF  D   N YDK LF AQ  ++++YRPK  AD DD    
Sbjct: 439 QSSETMWDSRLFNQTSGLSTGFNED---NPYDKPLFAAQDAINSIYRPKPQADFDD--EA 493

Query: 67  NADEQMEKIMKTDRF----KPDKGFAGSS---ERSGPRDRPVEFEKEAEEADPFGLDEFL 119
           +A+ +M KI K++RF    +  +GF G++   ERSG    PV+FEK+   ADPFG+D  +
Sbjct: 494 DAEGEMSKIQKSNRFEVLGRAKEGFRGAADAEERSG----PVQFEKDT--ADPFGIDSMI 547

Query: 120 TEVEKGG 126
            +V  G 
Sbjct: 548 ADVTGGA 554

Involved in pre-mRNA splicing.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

>sp|P0CR56|PRP45_CRYNJ Pre-mRNA-processing protein 45 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PRP45 PE=3 SV=1

 Score = 80.5 bits (197), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 11/127 (8%)

Query: 11  EVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDA-DDDMYGGNAD 69
           E   D RLFN+E  + +GFA++D YN+YDK LF      + +YRP   + +D+ +GG  +
Sbjct: 454 ETLLDSRLFNRE-ALSTGFASEDSYNLYDKPLFAGSSAAAAIYRPAGSSRNDESFGGGTE 512

Query: 70  EQMEKIMKTDRFK---PDKGFAGSSERSGPRDRPVEFEKEAE-----EADPFGLDEFLTE 121
           E +++ M  DRF+     +GF G +E    R+ PV+FEK+        ADPFG+++F+  
Sbjct: 513 EGIKEEMSKDRFQLGNATRGFEG-AEGVEAREGPVQFEKDTIVALDGSADPFGVEQFMDA 571

Query: 122 VEKGGKK 128
             +GGK+
Sbjct: 572 ARRGGKR 578

Involved in pre-mRNA splicing.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CR57|PRP45_CRYNB Pre-mRNA-processing protein 45 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PRP45 PE=3 SV=1

 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 11/127 (8%)

Query: 11  EVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDA-DDDMYGGNAD 69
           E   D RLFN+E  + +GFA++D YN+YDK LF      + +YRP   + +D+ +GG  +
Sbjct: 454 ETLLDSRLFNRE-ALSTGFASEDSYNLYDKPLFAGSSAAAAIYRPAGSSRNDESFGGGTE 512

Query: 70  EQMEKIMKTDRFK---PDKGFAGSSERSGPRDRPVEFEKEAE-----EADPFGLDEFLTE 121
           E +++ M  DRF+     +GF G +E    R+ PV+FEK+        ADPFG+++F+  
Sbjct: 513 EGIKEEMSKDRFQLGNATRGFEG-AEGVEAREGPVQFEKDTIVALDGSADPFGVEQFMDA 571

Query: 122 VEKGGKK 128
             +GGK+
Sbjct: 572 ARRGGKR 578

Involved in pre-mRNA splicing.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|Q22836|YGH1_CAEEL Uncharacterized protein T27F2.1 OS=Caenorhabditis elegans GN=T27F2.1 PE=1 SV=1

 Score = 80.1 bits (196), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 13/122 (10%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           +  T   R GE  +DQRLF++ +G+DSG   DD YN YD            +YRP K+ D
Sbjct: 399 LPDTNQKRTGEPQFDQRLFDKTQGLDSGAMDDDTYNPYDAAWRGGDSVQQHVYRPSKNLD 458

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFA---GSSERSGPRDRPVEFEKEAEEADPFGLDE 117
           +D+YGG+ D+ +E   + +RF  DKGF+   GSS  SG    PV+FEK   + D FGL  
Sbjct: 459 NDVYGGDLDKIIE---QKNRFVADKGFSGAEGSSRGSG----PVQFEK---DQDVFGLSS 508

Query: 118 FL 119
             
Sbjct: 509 LF 510

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
225445124	602	PREDICTED: SNW domain-containing protein	0.987	0.270	0.885	1e-76
255579527	238	nuclear protein skip, putative [Ricinus	0.987	0.684	0.873	2e-74
449443171	605	PREDICTED: SNW domain-containing protein	0.987	0.269	0.831	9e-73
224142193	611	predicted protein [Populus trichocarpa]	0.987	0.266	0.837	2e-72
449463575	603	PREDICTED: puff-specific protein Bx42-li	0.987	0.270	0.825	3e-72
224114541	596	predicted protein [Populus trichocarpa]	0.987	0.273	0.831	4e-72
115448809	607	Os02g0759800 [Oryza sativa Japonica Grou	0.981	0.266	0.808	1e-69
226498662	609	pre-mRNA-splicing factor prp45 [Zea mays	0.981	0.266	0.789	4e-67
242066588	609	hypothetical protein SORBIDRAFT_04g03386	0.981	0.266	0.789	4e-67
357138008	610	PREDICTED: SNW domain-containing protein	0.987	0.267	0.773	9e-67

>gi|225445124|ref|XP_002283858.1| PREDICTED: SNW domain-containing protein 1-like isoform 1 [Vitis vinifera] gi|359484551|ref|XP_003633120.1| PREDICTED: SNW domain-containing protein 1-like isoform 2 [Vitis vinifera]

 Score =  290 bits (743), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 147/166 (88%), Positives = 158/166 (95%), Gaps = 3/166 (1%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTGA RGGEV YDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQ TLS+LYRPKKDAD
Sbjct: 439 MASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQNTLSSLYRPKKDAD 498

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            D+YGG ADEQ+EKIMKT+RFKPDKGFAG+SER+GPRDRPVEFEKEAEEADPFGLD+FLT
Sbjct: 499 SDIYGG-ADEQLEKIMKTERFKPDKGFAGASERAGPRDRPVEFEKEAEEADPFGLDQFLT 557

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKKA+DKVGTGGTMRASAGSSMRD + GGSGR+RIGFERGR
Sbjct: 558 EVKK-GKKAMDKVGTGGTMRASAGSSMRDGHDGGSGRTRIGFERGR 602

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579527|ref|XP_002530606.1| nuclear protein skip, putative [Ricinus communis] gi|223529854|gb|EEF31786.1| nuclear protein skip, putative [Ricinus communis]

 Score =  283 bits (724), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 145/166 (87%), Positives = 156/166 (93%), Gaps = 3/166 (1%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTGAARGGEV YDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKD D
Sbjct: 75  MASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDVD 134

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            DMYGG ADEQ++KIMKTDRFKPDK FAG+SE++GPRDRPVEFEK+AEEADPFGLD+FLT
Sbjct: 135 SDMYGG-ADEQLDKIMKTDRFKPDKAFAGTSEKAGPRDRPVEFEKDAEEADPFGLDQFLT 193

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKKA+DKVG+GGTMRAS GSS RD Y GGSGR+RIGFERGR
Sbjct: 194 EVKK-GKKAMDKVGSGGTMRASGGSSTRDGYDGGSGRTRIGFERGR 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443171|ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus] gi|449487951|ref|XP_004157882.1| PREDICTED: SNW domain-containing protein 1-like isoform 1 [Cucumis sativus] gi|449487953|ref|XP_004157883.1| PREDICTED: SNW domain-containing protein 1-like isoform 2 [Cucumis sativus]

 Score =  277 bits (709), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 138/166 (83%), Positives = 151/166 (90%), Gaps = 3/166 (1%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTGA R GEV YDQRLFNQ+KGMDSGFA DDQYN+YD+GLFTAQPTLSTLYRPKKDAD
Sbjct: 442 MASTGAGREGEVMYDQRLFNQDKGMDSGFANDDQYNIYDRGLFTAQPTLSTLYRPKKDAD 501

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            DMYGG ADEQ++KI KTDRFKPDK F+G+SERSGPRDRPVEFE+E EEADPFGLD+FLT
Sbjct: 502 SDMYGG-ADEQLDKITKTDRFKPDKSFSGTSERSGPRDRPVEFEREVEEADPFGLDQFLT 560

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKKA+DKVG+GGTMRAS GSS RD Y GGSGR+RIGFERG 
Sbjct: 561 EVKK-GKKAMDKVGSGGTMRASGGSSTRDGYDGGSGRTRIGFERGH 605

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142193|ref|XP_002324443.1| predicted protein [Populus trichocarpa] gi|222865877|gb|EEF03008.1| predicted protein [Populus trichocarpa]

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/166 (83%), Positives = 153/166 (92%), Gaps = 3/166 (1%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTGA +GGEV YDQRLFNQEKGMDSGFA DDQY+VYDKGLFTAQPTLSTLYRPKKD D
Sbjct: 448 MASTGAGKGGEVAYDQRLFNQEKGMDSGFAADDQYSVYDKGLFTAQPTLSTLYRPKKDVD 507

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            +MYGG ADEQ++KIMKT+RFKPDK FAG+S+R+GPRDRPVEFEK+ EEADPFGLD+FLT
Sbjct: 508 AEMYGG-ADEQLDKIMKTERFKPDKEFAGTSQRTGPRDRPVEFEKDEEEADPFGLDQFLT 566

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKK  DKVGTGGTMRASAGSSMRD + GGSGR+RIGFERGR
Sbjct: 567 EVKK-GKKPTDKVGTGGTMRASAGSSMRDGHDGGSGRTRIGFERGR 611

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463575|ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus] gi|449523876|ref|XP_004168949.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus]

 Score =  276 bits (705), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 137/166 (82%), Positives = 150/166 (90%), Gaps = 3/166 (1%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTGA R GEV YDQRLFNQ+KGMDSGFA DDQYN+YDKGLFTAQPTLSTLYRPKKD D
Sbjct: 440 MASTGAGRQGEVMYDQRLFNQDKGMDSGFANDDQYNIYDKGLFTAQPTLSTLYRPKKDTD 499

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            DMYGG ADEQ++KI KTDRFKPDK F+G++ERSGPRDRPVEFE+E EEADPFGLD+FLT
Sbjct: 500 SDMYGG-ADEQLDKITKTDRFKPDKSFSGTAERSGPRDRPVEFEREVEEADPFGLDQFLT 558

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKKA+DKVG+GGTMRA  GSSMRD Y GGSGR+RIGFERG 
Sbjct: 559 EVKK-GKKAMDKVGSGGTMRAGGGSSMRDGYEGGSGRTRIGFERGH 603

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114541|ref|XP_002332355.1| predicted protein [Populus trichocarpa] gi|222832076|gb|EEE70553.1| predicted protein [Populus trichocarpa]

 Score =  275 bits (703), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 138/166 (83%), Positives = 154/166 (92%), Gaps = 3/166 (1%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTGA +GGEV YDQRLFNQEKGMDSGFA DDQYNVYDKGLFTAQPTLSTLY+PKK+AD
Sbjct: 433 MASTGAGKGGEVAYDQRLFNQEKGMDSGFAADDQYNVYDKGLFTAQPTLSTLYQPKKNAD 492

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            DMYGG ADEQ++KIMKT+RFKPDK FAG+S+R+GPRDRPVEFEK+ EEADPFGLD+FLT
Sbjct: 493 ADMYGG-ADEQIDKIMKTERFKPDKEFAGTSQRTGPRDRPVEFEKDEEEADPFGLDQFLT 551

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKKA+DKVG+GGTMRAS GSS RD + GGSGR+RIGFERGR
Sbjct: 552 EVKK-GKKAMDKVGSGGTMRASGGSSTRDGHDGGSGRTRIGFERGR 596

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115448809|ref|NP_001048184.1| Os02g0759800 [Oryza sativa Japonica Group] gi|47497360|dbj|BAD19399.1| putative GAMYB-binding protein [Oryza sativa Japonica Group] gi|113537715|dbj|BAF10098.1| Os02g0759800 [Oryza sativa Japonica Group] gi|125541209|gb|EAY87604.1| hypothetical protein OsI_09015 [Oryza sativa Indica Group] gi|125583761|gb|EAZ24692.1| hypothetical protein OsJ_08462 [Oryza sativa Japonica Group]

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 135/167 (80%), Positives = 152/167 (91%), Gaps = 5/167 (2%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTG A+GGEV YDQRLFNQ+KGMDSGFATDDQYN+Y KGLFTAQPTLSTLYRPKKD D
Sbjct: 444 MASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNIYSKGLFTAQPTLSTLYRPKKDGD 503

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            D+Y G+ADEQ+EK+MKTDRFKPDKGF+G+SERSG RDRPVEF+K+ EE DPFGLD+FLT
Sbjct: 504 SDVY-GDADEQLEKVMKTDRFKPDKGFSGASERSGKRDRPVEFDKQ-EENDPFGLDQFLT 561

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY--GGSGRSRIGFERGR 165
           EV+K GKKA++K+G+GG MRAS GSSMRDDY  GGSGRSRI FERGR
Sbjct: 562 EVKK-GKKAVEKIGSGGAMRASGGSSMRDDYEGGGSGRSRINFERGR 607

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226498662|ref|NP_001152362.1| pre-mRNA-splicing factor prp45 [Zea mays] gi|195655507|gb|ACG47221.1| pre-mRNA-splicing factor prp45 [Zea mays] gi|413924451|gb|AFW64383.1| pre-mRNA-splicing factor prp45 [Zea mays]

 Score =  258 bits (660), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 150/166 (90%), Gaps = 4/166 (2%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTG A+GGEV YDQRLFNQ+KGMDSGFATDDQYN+Y KGLFTAQ T+STLYRPKKD D
Sbjct: 447 MASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNIYSKGLFTAQSTMSTLYRPKKDGD 506

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            D+Y G+ADEQ+EK+MKT+RFKPDKGF G+SER+G RDRPVEF+K+ EE DPFGLD+FLT
Sbjct: 507 SDVY-GDADEQLEKVMKTERFKPDKGFTGASERTGKRDRPVEFDKQ-EENDPFGLDQFLT 564

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKKA++K+G GGTM+AS GSSMRDDY GGSGRSRI FERGR
Sbjct: 565 EVKK-GKKAVEKIGGGGTMKASGGSSMRDDYDGGSGRSRINFERGR 609

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242066588|ref|XP_002454583.1| hypothetical protein SORBIDRAFT_04g033860 [Sorghum bicolor] gi|241934414|gb|EES07559.1| hypothetical protein SORBIDRAFT_04g033860 [Sorghum bicolor]

 Score =  258 bits (660), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 150/166 (90%), Gaps = 4/166 (2%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTG A+GGEV YDQRLFNQ+KGMDSGFATDDQYN+Y KGLFTAQ T+STLYRPKKD D
Sbjct: 447 MASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNIYSKGLFTAQSTMSTLYRPKKDGD 506

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            D+Y G+ADEQ+EK+MKT+RFKPDKGF G+SER+G RDRPVEF+K+ EE DPFGLD+FLT
Sbjct: 507 SDVY-GDADEQLEKVMKTERFKPDKGFTGASERTGKRDRPVEFDKQ-EENDPFGLDQFLT 564

Query: 121 EVEKGGKKALDKVGTGGTMRASAGSSMRDDY-GGSGRSRIGFERGR 165
           EV+K GKKA++K+G GGTM+AS GSSMRDDY GGSGRSRI FERGR
Sbjct: 565 EVKK-GKKAVEKIGGGGTMKASGGSSMRDDYDGGSGRSRINFERGR 609

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357138008|ref|XP_003570590.1| PREDICTED: SNW domain-containing protein 1-like isoform 1 [Brachypodium distachyon] gi|357138010|ref|XP_003570591.1| PREDICTED: SNW domain-containing protein 1-like isoform 2 [Brachypodium distachyon]

 Score =  257 bits (657), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 130/168 (77%), Positives = 151/168 (89%), Gaps = 5/168 (2%)

Query: 1   MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
           MASTG A+GGEV YDQRLFNQ+KGMDSGFA DDQYN+Y KGLFTAQPTLSTLYRPKKD D
Sbjct: 445 MASTGGAKGGEVMYDQRLFNQDKGMDSGFAADDQYNIYSKGLFTAQPTLSTLYRPKKDGD 504

Query: 61  DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLT 120
            ++YGG+ADEQ++K+MKT+RFKPDKGF+G+SERSG RDRPVEF+K+ EE DPFGLD+FLT
Sbjct: 505 SEVYGGDADEQLDKVMKTERFKPDKGFSGASERSGKRDRPVEFDKQ-EEHDPFGLDQFLT 563

Query: 121 EVEKGGKKALDKVGTGGTMRAS-AGSSMRDDY--GGSGRSRIGFERGR 165
           EV++ GKKA++K+G GGTM+AS  GSS RDDY  GGSGRSRI FERGR
Sbjct: 564 EVKR-GKKAVEKIGGGGTMKASGGGSSTRDDYEGGGSGRSRINFERGR 610

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2195970	613	SKIP "SNW/Ski-interacting prot	0.969	0.261	0.718	1.3e-59
FB|FBgn0004856	547	Bx42 "Bx42" [Drosophila melano	0.727	0.219	0.496	1.8e-25
UNIPROTKB|G3V4X8	374	SNW1 "SNW domain-containing pr	0.660	0.291	0.512	7.6e-25
UNIPROTKB|Q13573	536	SNW1 "SNW domain-containing pr	0.660	0.203	0.512	3.4e-24
UNIPROTKB|Q5R7R9	536	SNW1 "SNW domain-containing pr	0.660	0.203	0.512	3.4e-24
UNIPROTKB|Q1JQE0	536	SNW1 "SNW domain-containing pr	0.660	0.203	0.512	4.4e-24
UNIPROTKB|J9P334	536	SNW1 "Uncharacterized protein"	0.660	0.203	0.512	4.4e-24
UNIPROTKB|I3L897	536	SNW1 "Uncharacterized protein"	0.660	0.203	0.512	4.4e-24
RGD|1561926	536	Snw1 "SNW domain containing 1"	0.660	0.203	0.512	5.7e-24
MGI|MGI:1913604	536	Snw1 "SNW domain containing 1"	0.660	0.203	0.504	7.4e-24

TAIR|locus:2195970 SKIP "SNW/Ski-interacting protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 120/167 (71%), Positives = 142/167 (85%)

Query:     1 MASTGAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDAD 60
             MASTG   GGEV YDQRLFNQ+KGMDSGFA DDQYN+YDKGLFTAQPTLSTLY+PKKD D
Sbjct:   446 MASTGGKGGGEVMYDQRLFNQDKGMDSGFAADDQYNLYDKGLFTAQPTLSTLYKPKKDND 505

Query:    61 DDMYGGNADEQMEKIMKTDRFKPDKGFAGSSERSGP-RDRPVEFEKEAEEADPFGLDEFL 119
             ++MYG NADEQ++KI  T+RFKPDK F G+SER G  RDRPVEFEKE EE DPFGL++++
Sbjct:   506 EEMYG-NADEQLDKIKNTERFKPDKAFTGASERVGSKRDRPVEFEKE-EEQDPFGLEKWV 563

Query:   120 TEVEKGGKKALDKVGTGGTMRASAG---SSMRDDYGGSGRSRIGFER 163
             ++++KG KK LDK+G+GGTMRAS G   SS  DD+GGSGR++I FER
Sbjct:   564 SDLKKG-KKPLDKIGSGGTMRASGGGGSSSRDDDHGGSGRTKINFER 609

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0008380 "RNA splicing" evidence=ISS;IMP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010555 "response to mannitol stimulus" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0005515 "protein binding" evidence=IPI

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

GO:0042752 "regulation of circadian rhythm" evidence=IGI

FB|FBgn0004856 Bx42 "Bx42" [Drosophila melanogaster (taxid:7227)]

 Score = 295 (108.9 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 64/129 (49%), Positives = 81/129 (62%)

Query:     6 AARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYG 65
             +A  GE  +DQRLFN  KGMDSG+  D+ YNVYDK    +    + +YRP K AD D YG
Sbjct:   410 SAGNGETLFDQRLFNTTKGMDSGYGDDEAYNVYDKPWRDSNTLGAHIYRPSKQADSDNYG 469

Query:    66 GNADEQMEKIMKTDRFKPDKGFAGSSERS--GPRDRPVEFEKEAEEADPFGLDEFLTEVE 123
             G+ D     I+ T RF PDK F+G+S+ +  G R  PVEFEKE    DPFGLD+FL   +
Sbjct:   470 GDLDA----IVNTKRFVPDKQFSGASKEAAAGQRSGPVEFEKEE---DPFGLDQFLNMAK 522

Query:   124 KGGKKALDK 132
             K  K+A +K
Sbjct:   523 KAPKRAEEK 531

GO:0005634 "nucleus" evidence=NAS

GO:0035214 "eye-antennal disc development" evidence=IMP

GO:0000790 "nuclear chromatin" evidence=NAS

GO:0001700 "embryonic development via the syncytial blastoderm" evidence=IMP

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

UNIPROTKB|G3V4X8 SNW1 "SNW domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 62/121 (51%), Positives = 79/121 (65%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG   
Sbjct:   242 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 298

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   299 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 352

Query:   128 K 128
             K
Sbjct:   353 K 353

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0000785 "chromatin" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|Q13573 SNW1 "SNW domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 283 (104.7 bits), Expect = 3.4e-24, P = 3.4e-24
 Identities = 62/121 (51%), Positives = 79/121 (65%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG   
Sbjct:   404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514

Query:   128 K 128
             K
Sbjct:   515 K 515

GO:0019048 "virus-host interaction" evidence=IEA

GO:0000785 "chromatin" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0005112 "Notch binding" evidence=IPI

GO:0005681 "spliceosomal complex" evidence=IDA

GO:0044428 "nuclear part" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0071300 "cellular response to retinoic acid" evidence=IDA

GO:0048384 "retinoic acid receptor signaling pathway" evidence=IDA

GO:0050769 "positive regulation of neurogenesis" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0035257 "nuclear hormone receptor binding" evidence=IDA

GO:0070564 "positive regulation of vitamin D receptor signaling pathway" evidence=IDA

GO:0046332 "SMAD binding" evidence=IDA

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=IDA

GO:0071146 "SMAD3-SMAD4 protein complex" evidence=IDA

GO:0042974 "retinoic acid receptor binding" evidence=IDA

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0042809 "vitamin D receptor binding" evidence=IDA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IMP

GO:0016363 "nuclear matrix" evidence=IDA

GO:0070562 "regulation of vitamin D receptor signaling pathway" evidence=IDA

GO:0003714 "transcription corepressor activity" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0048385 "regulation of retinoic acid receptor signaling pathway" evidence=IDA

GO:0008024 "positive transcription elongation factor complex b" evidence=IDA

GO:0043923 "positive regulation by host of viral transcription" evidence=IMP;IDA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=IMP

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=IMP

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS

GO:0007219 "Notch signaling pathway" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|Q5R7R9 SNW1 "SNW domain-containing protein 1" [Pongo abelii (taxid:9601)]

 Score = 283 (104.7 bits), Expect = 3.4e-24, P = 3.4e-24
 Identities = 62/121 (51%), Positives = 79/121 (65%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG   
Sbjct:   404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514

Query:   128 K 128
             K
Sbjct:   515 K 515

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0003714 "transcription corepressor activity" evidence=ISS

GO:0016363 "nuclear matrix" evidence=ISS

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=ISS

GO:0035257 "nuclear hormone receptor binding" evidence=ISS

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=ISS

GO:0042809 "vitamin D receptor binding" evidence=ISS

GO:0042974 "retinoic acid receptor binding" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0046332 "SMAD binding" evidence=ISS

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=ISS

GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISS

GO:0048385 "regulation of retinoic acid receptor signaling pathway" evidence=ISS

GO:0050769 "positive regulation of neurogenesis" evidence=ISS

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISS

GO:0070562 "regulation of vitamin D receptor signaling pathway" evidence=ISS

GO:0008024 "positive transcription elongation factor complex b" evidence=ISS

GO:0071146 "SMAD3-SMAD4 protein complex" evidence=ISS

UNIPROTKB|Q1JQE0 SNW1 "SNW domain-containing protein 1" [Bos taurus (taxid:9913)]

 Score = 282 (104.3 bits), Expect = 4.4e-24, P = 4.4e-24
 Identities = 62/121 (51%), Positives = 78/121 (64%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +     +YRP K+ D DMYG   
Sbjct:   404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG--- 460

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514

Query:   128 K 128
             K
Sbjct:   515 K 515

GO:0071146 "SMAD3-SMAD4 protein complex" evidence=ISS

GO:0016363 "nuclear matrix" evidence=ISS

GO:0008024 "positive transcription elongation factor complex b" evidence=ISS

GO:0046332 "SMAD binding" evidence=ISS

GO:0042974 "retinoic acid receptor binding" evidence=ISS

GO:0042809 "vitamin D receptor binding" evidence=ISS

GO:0003714 "transcription corepressor activity" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0070562 "regulation of vitamin D receptor signaling pathway" evidence=ISS

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISS

GO:0048385 "regulation of retinoic acid receptor signaling pathway" evidence=ISS

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=ISS

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=ISS

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0050769 "positive regulation of neurogenesis" evidence=ISS

GO:0035257 "nuclear hormone receptor binding" evidence=ISS

GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA

UNIPROTKB|J9P334 SNW1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 282 (104.3 bits), Expect = 4.4e-24, P = 4.4e-24
 Identities = 62/121 (51%), Positives = 78/121 (64%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +     +YRP K+ D DMYG   
Sbjct:   404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG--- 460

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514

Query:   128 K 128
             K
Sbjct:   515 K 515

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA

UNIPROTKB|I3L897 SNW1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 282 (104.3 bits), Expect = 4.4e-24, P = 4.4e-24
 Identities = 62/121 (51%), Positives = 78/121 (64%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +     +YRP K+ D DMYG   
Sbjct:   404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYG--- 460

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   461 -DDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514

Query:   128 K 128
             K
Sbjct:   515 K 515

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0048384 "retinoic acid receptor signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0035257 "nuclear hormone receptor binding" evidence=IEA

GO:0005112 "Notch binding" evidence=IEA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA

RGD|1561926 Snw1 "SNW domain containing 1" [Rattus norvegicus (taxid:10116)]

 Score = 281 (104.0 bits), Expect = 5.7e-24, P = 5.7e-24
 Identities = 62/121 (51%), Positives = 79/121 (65%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG   
Sbjct:   404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  R   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   461 -DDLETRIKTNRFVPDKEFSGSDGRKRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514

Query:   128 K 128
             K
Sbjct:   515 K 515

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;ISO

GO:0000785 "chromatin" evidence=IDA

GO:0003713 "transcription coactivator activity" evidence=ISO

GO:0003714 "transcription corepressor activity" evidence=ISO

GO:0005112 "Notch binding" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005681 "spliceosomal complex" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0016363 "nuclear matrix" evidence=ISO

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=ISO

GO:0035257 "nuclear hormone receptor binding" evidence=IEA;ISO

GO:0035914 "skeletal muscle cell differentiation" evidence=ISO

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=ISO

GO:0042809 "vitamin D receptor binding" evidence=ISO

GO:0042974 "retinoic acid receptor binding" evidence=ISO

GO:0043923 "positive regulation by host of viral transcription" evidence=ISO

GO:0044428 "nuclear part" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0046332 "SMAD binding" evidence=ISO

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=ISO

GO:0048384 "retinoic acid receptor signaling pathway" evidence=IEA;ISO

GO:0048385 "regulation of retinoic acid receptor signaling pathway" evidence=ISO

GO:0050769 "positive regulation of neurogenesis" evidence=ISO

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISO

GO:0070562 "regulation of vitamin D receptor signaling pathway" evidence=ISO

GO:0070564 "positive regulation of vitamin D receptor signaling pathway" evidence=ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO

GO:0071300 "cellular response to retinoic acid" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

GO:0008024 "positive transcription elongation factor complex b" evidence=ISO

GO:0071146 "SMAD3-SMAD4 protein complex" evidence=ISO

MGI|MGI:1913604 Snw1 "SNW domain containing 1" [Mus musculus (taxid:10090)]

 Score = 280 (103.6 bits), Expect = 7.4e-24, P = 7.4e-24
 Identities = 61/121 (50%), Positives = 79/121 (65%)

Query:    11 EVTYDQRLFNQEKGMDSGFA--TDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNA 68
             EV YDQRLFNQ KGMDSGFA   D+ YNVYD+     +    ++YRP K+ D DMYG   
Sbjct:   404 EVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYG--- 460

Query:    69 DEQMEKIMKTDRFKPDKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEK-GGK 127
              + +E  +KT+RF PDK F+GS  +   R+ PV+FE+     DPFGLD+FL E ++ GG 
Sbjct:   461 -DDLEARIKTNRFVPDKEFSGSDRKQRGREGPVQFEE-----DPFGLDKFLEEAKQHGGS 514

Query:   128 K 128
             K
Sbjct:   515 K 515

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISO

GO:0000785 "chromatin" evidence=ISO

GO:0003713 "transcription coactivator activity" evidence=ISO

GO:0003714 "transcription corepressor activity" evidence=ISO

GO:0005112 "Notch binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005681 "spliceosomal complex" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0016363 "nuclear matrix" evidence=ISO

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=ISO

GO:0035257 "nuclear hormone receptor binding" evidence=ISO

GO:0035914 "skeletal muscle cell differentiation" evidence=IMP

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=ISO

GO:0042809 "vitamin D receptor binding" evidence=ISO

GO:0042974 "retinoic acid receptor binding" evidence=ISO

GO:0043923 "positive regulation by host of viral transcription" evidence=ISO

GO:0044428 "nuclear part" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0046332 "SMAD binding" evidence=ISO

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=ISO

GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO

GO:0048385 "regulation of retinoic acid receptor signaling pathway" evidence=ISO

GO:0050769 "positive regulation of neurogenesis" evidence=IDA

GO:0051571 "positive regulation of histone H3-K4 methylation" evidence=ISO

GO:0070562 "regulation of vitamin D receptor signaling pathway" evidence=ISO

GO:0070564 "positive regulation of vitamin D receptor signaling pathway" evidence=ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

GO:0071300 "cellular response to retinoic acid" evidence=ISO;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
KOG2441	506	consensus mRNA splicing factor/probable chromatin	100.0

>KOG2441 consensus mRNA splicing factor/probable chromatin binding snw family nuclear protein [RNA processing and modification; Chromatin structure and dynamics]

Probab=100.00  E-value=1.4e-35  Score=266.82  Aligned_cols=110  Identities=57%  Similarity=0.986  Sum_probs=97.3

Q ss_pred             CCCCCCCccchhhhccccCCCCCCCCCCCccccccccccCCCccccccccCCCCCCccccCCCcHHHHHHHhhc-cccCC
Q 042214            5 GAARGGEVTYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPKKDADDDMYGGNADEQMEKIMKT-DRFKP   83 (165)
Q Consensus         5 ~a~~s~E~~yDsRLFNQs~G~dSGFg~Dd~YNVYDKPLF~~~~a~~sIYRP~~~~d~d~~g~~~~~~l~k~~~t-~rF~~   83 (165)
                      +...++|+|||||||||++||+|||++|++|||||+|||.+++ +++||||++++++++||.+   +++.++++ +||++
T Consensus       395 ~~~~~~e~qyDqRlFnq~~g~dSg~~~dd~ynvYD~~wr~~q~-~~siYrp~k~ld~e~yg~~---el~~~i~~~~rf~~  470 (506)
T KOG2441|consen  395 KPSESGEVQYDQRLFNQGKGLDSGFADDDEYNVYDKPWRGAQD-ISSIYRPSKNLDDEVYGVD---ELESIIKGPNRFVA  470 (506)
T ss_pred             CCCCCCcchhhHHhhhcccCccccccccccccccccccccCCc-hhhhhCCCccchhhhhcch---hhhhhccCcccccc
Confidence            4456899999999999999999999999999999999999999 7999999999999999942   35555654 99999


Q ss_pred             CCcccCCcCCCCCCCCCeeeecccccCCCchhhHHHHHHHhcC
Q 042214           84 DKGFAGSSERSGPRDRPVEFEKEAEEADPFGLDEFLTEVEKGG  126 (165)
Q Consensus        84 ~k~F~Ga~~~~~~R~gPVqFEKd~~~~DpFGld~fL~~aKk~~  126 (165)
                      +|+|+|+++.++. +|||||||     |||||+  |+++|++.
T Consensus       471 dk~f~gsd~~~~~-~gPV~FEk-----Dpfg~~--l~~~~~~~  505 (506)
T KOG2441|consen  471 DKSFSGSDERVRS-DGPVQFEK-----DPFGLD--LSDLKKHK  505 (506)
T ss_pred             ccccccccccccC-CCCceecc-----CCcccc--hHhhhhcC
Confidence            9999999666555 99999998     699999  99999843

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00