Citrus Sinensis ID: 042218

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-----
Protein Sequence
MAETLSPLRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSIILP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHcccccccEEEEEEEEHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHccHHHHHHccccccccccHHHHHHHHcccccccccccccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHcccccccHHHHccccHHHHHHHHHHHccccccEEcccccccccEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHcHHHHHHHHHHHHHHHHcccccccccHEEEEEEHcccEEEEEEEHHHHHHHHHHHHHcHcccccccccccccccccccccccccccccccccccccHHHHHccHHHcccHHHcccccccHHHHHHHHcccccccHHHHHcccccccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHcccccEEccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcHHHHccEccHHHHHHHHHHHHHcccccccccccccccHHHHHHHcccccccHHHHHHccHHHHHHHHHHHHHHcccEEEcccccccEEEEcc
Coil and Loop (DISEMBL)
maetlsplRRQKVAIAsriqsptspfflgsndDGLERAKARAARAAAIrrkpvtvhyplpqhghsdsclgkDQILELFHNCIKLASenkinqkntwELNLIDHLCEIIKveeendvetnFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGginragqeneqdtrvedknahsvhregyskkdiekklsplstlESSFEALnvkkfdaafavdplyhqtsaqfdeggakglllnnlgvytgcqvlfdsqevpgkgmscasqhsmsdtiDLSFASEYIEQMVLNMQAKDEISPTLRTIVnqydednrrssdtfSSIQKLVDQVEAVHnneaesdgvafddcgtndfyhddqssivdenlggsdptftsyledpdtddrfeRVDEYLFLNlgfsskqnawagpdhwkyrkakgpvegskddpaleggspvrtkkirgrrqpepdidfkkaldekfpdlfappknpksllipgnrapsnttlpedchyqpedliklfllpnvmcldkrrrrkssverqqtddhegfpswgnenmfdgqfddgndpsdvegsdtlvsqprqvQKVEVEydktskqvDVQTLKETIWVHIqespqmaaqdpektVSFRSLLssfpsgcraaatikdisphLCFICLLHLanehslsiqgcanlddlsiilp
Flexible Loop (DISEMBL)
maetlsplrrqkvaiasriqsptspfflgsndDGLERAKARAARAAAirrkpvtvhyplpqhghsDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGginragqeneqdtrvedknahsvhregyskkdiekklsPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGfsskqnawagpdhWKYRKAKGpvegskddpaleggspvrtkkirgrrqpepdidfKKALDEKFPDLfappknpksllipgnraPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRrrkssverqqtddhegfpswgneNMFDGQFDDGNDPSDVEGSdtlvsqprqvqkveveydktskqvdvQTLKETIWVHIQespqmaaqdPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLsiqgcanldDLSIILP
Low Complexity Region (SEG)
MAETLSPLRRQKVAIASRIQSPTSPFFLGSNDDGLErakaraaraaairrkPVTVHYPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEggakglllnnlgVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSIILP
Disordered region (IsUnstruct)
***********************************************IRRKPVTVHYPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGI********************************************FEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQ*****************TIDLSFASEYIEQMVLNMQAK**I**TLRTIV************************************VAFDDCGTNDFYHD****************************RFERVDEYLFLNLGFSSKQNAWAGPDHWKY***************************************************************************DCHYQPEDLIKLFLLPNVMCLD********************************************************************VDVQTLKETIWVHI******************SLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSII**
Disordered Region (DISOPRED)
***************************************************************************ELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVL*********************************************SSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDS**********************SFASEYIEQMVL*******ISPTLRTIVNQYDED******************EAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGG************************LFLNLGFSSKQNAWAGPDHWKY***********************************DIDFKKALDEKFPDL*****************PSNTTLPEDCHYQPEDLIKLFLLPN********************DHEGFPSWGNENMFDGQFDDGNDPSDVEG*********************SKQVDVQTLKETI***********************LLSSFP***********ISPHLCFICLLHLANEHSLSIQGCANLDDLSIILP
Disordered Region (DISEMBL)
********RRQKVAIASRIQSPTSPFFLGSNDDGLER*********AIRRKPVTVHYPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQEV***********SMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDK****************EGFPSWGNENMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESP**********VSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSIILP
Disordered Region (DISPRO)
*******************************************************************CLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGIN***********************************PLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQE********************SFASEYIEQMVLNMQAKDEISPTLRTIVNQYD********************E*****EAESDGVAFDDCGTNDFYHD**************************DDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAK*****************************EPDIDFKKALDEKFPDLFAPPKNPKSLLIPG*RAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLD********************PSWGNENMFDGQF************DTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESP********KTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSIILP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAETLSPLRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSIILP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	655	2.2.26 [Sep-21-2011]
Q564K3	671	Condensin complex subunit	yes	no	0.986	0.962	0.619	0.0
Q8C156	731	Condensin complex subunit	yes	no	0.917	0.822	0.272	3e-43
O13067	699	Condensin complex subunit	N/A	no	0.922	0.864	0.262	1e-36
Q15003	741	Condensin complex subunit	yes	no	0.882	0.780	0.261	1e-34
P38170	754	Condensin complex subunit	yes	no	0.812	0.705	0.255	3e-34
Q9Y7R3	742	Condensin complex subunit	yes	no	0.337	0.297	0.359	4e-28

>sp|Q564K3|CND2_ARATH Condensin complex subunit 2 OS=Arabidopsis thaliana GN=CAPH PE=1 SV=1

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/678 (61%), Positives = 504/678 (74%), Gaps = 32/678 (4%)

Query: 1   MAETLSPLRRQKVA-IASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPL 59
           M E+L+P  +QK A   +RIQ+PTSPFFLGSNDD LER +ARAARAAA RR+ V      
Sbjct: 1   MDESLTPNPKQKPASTTTRIQAPTSPFFLGSNDDRLEREQARAARAAASRRRSVIFARGS 60

Query: 60  PQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETN 119
                SD C  K QILELF NCIKLASENKINQKNTWELNLIDHLCEIIKVE+EN+ ETN
Sbjct: 61  QPETESDPCFDKQQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDENNTETN 120

Query: 120 FQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYS 179
           FQKASCTLEAGVKIYS+RVDSVHSEAYKVLGGI RAG ++  D    +  A +V      
Sbjct: 121 FQKASCTLEAGVKIYSMRVDSVHSEAYKVLGGITRAGHDDGGD---HEDAAGAVENATNQ 177

Query: 180 KKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYT 239
           KK  EKK+SPLSTLE SF+ALNVKKFD AFAVDPLYHQTSAQFDEGGAKGLLLNNLGVY 
Sbjct: 178 KKQPEKKISPLSTLEPSFDALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYG 237

Query: 240 GCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQ 299
           GCQVLFDSQE+PGK +S A++H  S+TIDLSF  E +EQMVLNM+ KDEI P+LR I+NQ
Sbjct: 238 GCQVLFDSQEIPGKLVSSANKHDKSETIDLSFVKECVEQMVLNMRKKDEIVPSLRAIINQ 297

Query: 300 YDEDNRRSSDTFSSIQKLVDQVEAVHNNEAE--SDGVAFDDCGTNDFYHDDQSSIVDENL 357
           +DE+N+R SDTFS  Q+  +  +  H N+A    D   +++ GT+ F ++ QS  VDEN 
Sbjct: 298 FDEENQRPSDTFSCGQQTTESFDISHGNDASYADDDEGYENFGTS-FDYEGQSGDVDENF 356

Query: 358 GG--SDPTFTSY--------LEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRK 407
           G   ++P ++++        L+D D+DDR E VD+YLFL+LG SSKQN+WAGPDHWKYRK
Sbjct: 357 GPNEAEPIYSNFHEEVEPASLQDMDSDDRLENVDDYLFLSLGISSKQNSWAGPDHWKYRK 416

Query: 408 AKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLI 467
            KGP       PA E  S    KK R ++Q EP++DF KAL+E+ PD+FAPPKNPK+LL+
Sbjct: 417 TKGP----DVQPASEIKSSPPAKKTRKKKQAEPELDFAKALEEEMPDIFAPPKNPKTLLL 472

Query: 468 PGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSS-VERQQTDDHEGFPSWG 526
           P +R P  T LPEDCHYQPE+LIKLFLLPNVMCL +RRR+ S    RQQ DD+E   SWG
Sbjct: 473 PASRTPCQTKLPEDCHYQPENLIKLFLLPNVMCLGRRRRKNSGETSRQQPDDYEHGESWG 532

Query: 527 NENMF----DGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWV 582
           N+N++        D+ ND SD E ++TL+SQPRQV K++V+YDK SKQVDVQ LKET+W 
Sbjct: 533 NDNVYDDDDGPFDDNENDQSDAEDTNTLISQPRQVNKIDVQYDKASKQVDVQVLKETLWE 592

Query: 583 HIQESPQMAAQD------PEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANE 636
            +QES Q   QD      P ++ SF+ LL+SFP  C+AA   +DISPHLCFICLLHLANE
Sbjct: 593 CLQESHQPPIQDEEHQQEPPESRSFKVLLASFPDDCQAAERTQDISPHLCFICLLHLANE 652

Query: 637 HSLSIQGCANLDDLSIIL 654
           H+LS+ G  NLDDL+I L
Sbjct: 653 HNLSLIGSQNLDDLTIHL 670

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Essential protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8C156|CND2_MOUSE Condensin complex subunit 2 OS=Mus musculus GN=Ncaph PE=2 SV=1

 Score =  177 bits (448), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 205/751 (27%), Positives = 321/751 (42%), Gaps = 150/751 (19%)

Query: 6   SPLRRQKVAIASR-----IQSPTSPFF--LGSNDDGLERAKARAARAAAIRRKPVTVHYP 58
           SPL R  V  ASR     + +P +P       NDD  ER + R +R   ++    ++H  
Sbjct: 25  SPLER--VPPASRPGKAPLGTPKTPVLEDFPQNDDEKERMQRRRSRVFDLQFSTDSIHLA 82

Query: 59  LPQH----GHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEEN 114
            P        + S     QI E +  CIKL+SENKI  KN + L+LID + EI+K   + 
Sbjct: 83  SPNRNIDVSTTISKFTNTQITEHYSTCIKLSSENKITTKNAFGLHLIDFMSEILK---QK 139

Query: 115 DVE-TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHS- 172
           D E TNF+ A+ TL+A  KIY++RVD+VH++ Y+VLGG+ +       DT  + + +HS 
Sbjct: 140 DAEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGLGK-------DTPPQGEESHSG 192

Query: 173 ----VHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAK 228
               +  E   K    KK     T+E +   +NV + D   AVDP++ +T+A FDE    
Sbjct: 193 DGSTLETERTKKPAKPKKKQSCKTIEQNLSNINVSEADGKCAVDPMFQKTAASFDECSTT 252

Query: 229 GLLLNNLGVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDE 288
           G+ L+ L     CQ        P    + +S   + +  DL F      +  L    +D 
Sbjct: 253 GVFLSTL----HCQDYRSELLFPSDMQTLSSGEPL-ELPDLGFVDMTDLEASLQQCVEDR 307

Query: 289 -ISPTLRTI-VNQYD-EDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCG-TNDF 344
            + P+L      ++D E +  S        K  DQV  + N EAE D     D     DF
Sbjct: 308 PLCPSLAGFQFTKWDSETHNESVSALVDKFKKNDQVFDI-NAEAEDDEEDVPDGPLVEDF 366

Query: 345 YHDDQSSIVDENLGGSDPTFTSY---------------LEDPDTDDRFERVDEYLFLNLG 389
             +D+    D +  G    F S+               LED D     + +  +L +  G
Sbjct: 367 VDNDEP---DLSAAGDHEEFRSWKELCQVQSNQEEVISLEDRD----IQVMCSFLSMKPG 419

Query: 390 ----FSSK-QNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDF 444
               FS +    WAGPDHW++R            P  +  S    KK   ++  E + D 
Sbjct: 420 EYSYFSPRTMKMWAGPDHWRFRPR----------PKQDATSCTEHKKKSAKKDFEINFDD 469

Query: 445 KKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKR 504
               D  F    A     KS L   N+    TTLP D HY+ ++LI+L L P      KR
Sbjct: 470 DIDFDAYFQKTKAATILTKSTL--ENQNWKATTLPTDFHYETDNLIQLHLKPG-----KR 522

Query: 505 RRRKSSVERQQTDDHEGFPSWGNENMFD--------------------------GQFDDG 538
             +    ++ +T+ +E    +   N  D                          G  D  
Sbjct: 523 SLKMDQDQKAKTEHYEEIEDYDYNNPNDTSNYCPGLQAADSDYEEADDLFADPVGTLDLE 582

Query: 539 NDPSDV----------EGSD-------TLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIW 581
           +DP             +G D        LV++P++V K+E+ Y KT+K++D++ LK+++W
Sbjct: 583 SDPKTTQENGHISPENQGVDITTYQELNLVAEPQKVNKIEIHYAKTAKKMDMKKLKQSMW 642

Query: 582 VHIQE-------------------SPQMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDIS 622
             + +                   +P+  A + + +   + L +  P         +++S
Sbjct: 643 SLLTKFSRKEADTEANHTESGQEGAPEEVADEKKLSGLTKDLQTRLP-----PLMAQNLS 697

Query: 623 PHLCFICLLHLANEHSLSIQGCANLDDLSII 653
             L F CLLHLANE +L ++G  +L D+ ++
Sbjct: 698 IPLAFACLLHLANEKNLKLEGTEDLSDVLVM 728

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.

Mus musculus (taxid: 10090)

>sp|O13067|CND2_XENLA Condensin complex subunit 2 OS=Xenopus laevis GN=ncaph PE=1 SV=1

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 189/720 (26%), Positives = 320/720 (44%), Gaps = 116/720 (16%)

Query: 5   LSPLRR-QKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIR----RKPVTVHYPL 59
           LSP  R Q ++ A+   +PT   F  SNDD  ER   R +R   ++      P T   P 
Sbjct: 22  LSPATRPQPISAAA---TPTLLNFT-SNDDERERKLRRMSRVIDLQLSNANSPATAISPA 77

Query: 60  PQHGHSDSC-----LGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEEN 114
              G          L   QI + +  CIKL+ ENKI  KN + L+LID++ +I+K     
Sbjct: 78  QSRGADTPTSLLPKLNNTQISDHYSTCIKLSQENKITTKNAFGLHLIDYMGDILK---HK 134

Query: 115 DVE-TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSV 173
           D E TNF+ A+ TL+A  KIY++RVD+VH++ YKVLGG+   G+E++     E++   + 
Sbjct: 135 DSELTNFKVAAGTLDASAKIYAVRVDAVHADVYKVLGGL---GKESQATEDTENQETDTG 191

Query: 174 HREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLN 233
            ++G  +K+ +++     T+E +  ++N  + +    +DPL+ + +A FDE    G+ L+
Sbjct: 192 PQDG--RKNPKRRKCSYKTIERNLNSINRSETERKSEIDPLFQKAAASFDEFSTAGVFLS 249

Query: 234 NLGVYT-GCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPT 292
            L  ++   ++ FD+   P   +S A +         S  S  ++ + L    K  + P+
Sbjct: 250 TLKCHSYHSELHFDADVKP---LSTAEETEPPSPG--SMDSTELKSLFLQCVEKRPLCPS 304

Query: 293 L---RTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQ 349
           L   R +    D  N   S      +K  D V  + N E E D V  +    ++F  D  
Sbjct: 305 LSGFRFMQWNSDAQNENLSLLMDKFKK-SDHVFDI-NAEVEDDFVESEAPVADEFDAD-- 360

Query: 350 SSIVDENLGGSD-PTFTSYLEDPDTDDRFERVDEY-------LFLNLGFSSKQNAWAGP- 400
              V E +   D   F  + E    + +  ++ +        + L L     + ++  P 
Sbjct: 361 ---VCEGMDAGDIGEFAEHREACRLERKGAQLTQIGNGDIGTMCLQLSSCPGEYSYFSPR 417

Query: 401 --------DHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRG--RRQPEPDIDFKKALDE 450
                   +HW++R    P + +  D   +     R KK +       E DIDF    + 
Sbjct: 418 TMSMWAGPEHWRFR----PRQKASTDSDQQ-----RVKKAKKVFELNFEDDIDF----EV 464

Query: 451 KFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSS 510
            F    A     KS L   N+   +TTLP D HY P+++ ++ L P      K R RK++
Sbjct: 465 HFRKTRAATTLTKSTLESQNK--KSTTLPADFHYDPDNIARMSLRP------KDRIRKTT 516

Query: 511 VER--QQTDDHEGFPSWGNEN-------------------MFDGQ------FDDGNDPSD 543
           V+    + +D  G   + N N                    F G       F   N  + 
Sbjct: 517 VQESVSEPEDDIGDYDYNNPNDTSNFCPALQAADSDDDDGAFLGPESNSAGFSAENQMNI 576

Query: 544 VEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMAAQDPEKT----- 598
               ++ +   ++V K+E++Y KT+K++D++ LK ++W  +   P+   + P        
Sbjct: 577 TSYGESNLVAGQKVNKIEIQYAKTAKKMDMKRLKSSMWSLLANCPESQEEMPSSKEEIDA 636

Query: 599 --VSFRSLLSSFPSGCRA---AATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSII 653
             ++   + SS   G +        +++S  L F CLLHLANE +L +QG  +L D+ I+
Sbjct: 637 ALITDEQVFSSVTHGLQKRLPPVMAQNLSVPLAFACLLHLANEKNLKLQGMDDLSDVMIM 696

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerase.

Xenopus laevis (taxid: 8355)

>sp|Q15003|CND2_HUMAN Condensin complex subunit 2 OS=Homo sapiens GN=NCAPH PE=1 SV=3

 Score =  148 bits (373), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 189/724 (26%), Positives = 304/724 (41%), Gaps = 146/724 (20%)

Query: 31  NDDGLERAKARAARA-------------AAIRRKPVTVHYPLPQHGHSDSCLGKDQILEL 77
           NDD  ER + R +R              A+   + + +   +P+  ++       QI E 
Sbjct: 58  NDDEKERLQRRRSRVFDLQFSTDSPRLLASPSSRSIDISATIPKFTNT-------QITEH 110

Query: 78  FHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVE-TNFQKASCTLEAGVKIYSL 136
           +  CIKL++ENKI  KN + L+LID + EI+K   + D E TNF+ A+ TL+A  KIY++
Sbjct: 111 YSTCIKLSTENKITTKNAFGLHLIDFMSEILK---QKDTEPTNFKVAAGTLDASTKIYAV 167

Query: 137 RVDSVHSEAYKVLGGINR-AGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLES 195
           RVD+VH++ Y+VLGG+ + A    E +  V D +A  +     + K  +K L    T+E 
Sbjct: 168 RVDAVHADVYRVLGGLGKDAPSLEEVEGHVADGSATEMGTTKKAVKPKKKHLH--RTIEQ 225

Query: 196 SFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQEVPGKGM 255
           +   LNV + D    +DP++ +T+A FDE    G+ L+ L     CQ        P    
Sbjct: 226 NINNLNVSEADRKCEIDPMFQKTAASFDECSTAGVFLSTL----HCQDYRSELLFPSDVQ 281

Query: 256 SCASQHSMSDTIDLSFASEYIEQMVLNMQAKD-EISPTLRTI-VNQYD-EDNRRSSDTFS 312
           + ++   + +  +L        +  L   A+D +I P+L      Q+D E +  S     
Sbjct: 282 TLSTGEPL-ELPELGCVEMTDLKAPLQQCAEDRQICPSLAGFQFTQWDSETHNESVSALV 340

Query: 313 SIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEDPD 372
              K  DQV  ++    ESD   F D    D +  D +   D    G    F S+ E   
Sbjct: 341 DKFKKNDQVFDINAEVDESDCGDFPDGSLGDDF--DANDEPDHTAVGDHEEFRSWKEPCQ 398

Query: 373 T-----------DDRFERVDEYLFLNLG----FSSK-QNAWAGPDHWKYRKAKGPVEGSK 416
                       D     +   L +  G    FS +  + WAGPDHW++R  +      +
Sbjct: 399 VQSCQEEMISLGDGDIRTMCPLLSMKPGEYSYFSPRTMSMWAGPDHWRFRPRR-----KQ 453

Query: 417 DDPALEGGSPVRTKK---IRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAP 473
           D P+        TKK   I      + D+ F+K    K   +       KS L   N+  
Sbjct: 454 DAPSQSENKKKSTKKDFEIDFEDDIDFDVYFRKT---KAATILT-----KSTL--ENQNW 503

Query: 474 SNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMFD- 532
             TTLP D +Y  + L++L L P    L     + +   R +T+ +E    +   N  D 
Sbjct: 504 RATTLPTDFNYNVDTLVQLHLKPGTRLL-----KMAQGHRVETEHYEEIEDYDYNNPNDT 558

Query: 533 -------------------------GQFD--------------DGNDPS------DVEGS 547
                                    G  D              +G+ P          G 
Sbjct: 559 SNFCPGLQAADSDDEDLDDLFVGPVGNSDLSPYPCHPPKTAQQNGDTPEAQGLDITTYGE 618

Query: 548 DTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQ-----------------ESPQM 590
             LV++P++V K+E+ Y KT+K++D++ LK+++W  +                  +   +
Sbjct: 619 SNLVAEPQKVNKIEIHYAKTAKKMDMKKLKQSMWSLLTALSGKEADAEANHREAGKEAAL 678

Query: 591 AAQDPEKTVS--FRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLD 648
           A    EK +S   + L  S P         +++S  L F CLLHLANE +L ++G  +L 
Sbjct: 679 AEVADEKMLSGLTKDLQRSLP-----PVMAQNLSIPLAFACLLHLANEKNLKLEGTEDLS 733

Query: 649 DLSI 652
           D+ +
Sbjct: 734 DVLV 737

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.

Homo sapiens (taxid: 9606)

>sp|P38170|CND2_YEAST Condensin complex subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BRN1 PE=1 SV=3

 Score =  147 bits (370), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 193/755 (25%), Positives = 302/755 (40%), Gaps = 223/755 (29%)

Query: 78  FHNCIKLASENKINQKNTWELNLIDHLCEIIKVEE-ENDVETNFQKASCTLEAGVKIYSL 136
           F   IK+A++NKIN +N+W   LID+  ++  +++ EN++  NFQKAS TL+  +KIYS 
Sbjct: 31  FEEWIKMATDNKINSRNSWNFALIDYFYDLDVLKDGENNI--NFQKASATLDGCIKIYSS 88

Query: 137 RVDSVHSEAYKVLGGINRA---GQENEQDTRV--------------------------ED 167
           RVDSV +E  K+L G+ +    G  N  D+                             D
Sbjct: 89  RVDSVTTETGKLLSGLAQRKTNGASNGDDSNGGNGEGLGGDSDEANIEIDPLTGMPISND 148

Query: 168 KNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGA 227
            + ++  R  Y++         L T    FE + +K+ D    +DPL+ +    FDEGGA
Sbjct: 149 PDVNNTRRRVYNR--------VLETTLVEFETIKMKELDQELIIDPLFKKALVDFDEGGA 200

Query: 228 KGLLLNNLGVYTGCQVLF-----DSQEV------------------------PGKGM--- 255
           K LLLN L +    +V+F     D+Q V                        P + +   
Sbjct: 201 KSLLLNTLNIDNTARVIFDASIKDTQNVGQGKLQRKEEELIERDSLVDDENEPSQSLIST 260

Query: 256 --------SCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRS 307
                   S  S  SM D I LS   ++I+    +  A  EIS ++  + N   ED  ++
Sbjct: 261 RNDSTVNDSVISAPSMEDEI-LSLGMDFIK---FDQIAVCEISGSIEQLRNVV-EDINQA 315

Query: 308 SDTFSSIQKLVD------QVEAVHNNEAESDGVAFD----------DCGTNDFYHDDQSS 351
            D   ++    D      +++A   + AE D   FD          D   ++  HD+Q  
Sbjct: 316 KDFIENVNNRFDNFLTEEELQAAVPDNAEDDSDGFDMGMQQELCYPDENHDNTSHDEQD- 374

Query: 352 IVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGP 411
             D+N+     T  S  E     D     DE L  N         W G +HWK R  K  
Sbjct: 375 --DDNVNS---TTGSIFE----KDLMAYFDENLNRN---------WRGREHWKVRNFKKA 416

Query: 412 VEGSKDDPALEGGSPVRTKKIRGRRQPEP-------------------DIDFKKALDEKF 452
              +K+   LE      T+   G    +                    +IDF K  D+ F
Sbjct: 417 NLVNKESDLLE-----ETRTTIGDTTDKNTTDDKSMDTKKKHKQKKVLEIDFFKT-DDSF 470

Query: 453 PD-LFAPPKNPK-SLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLP-NVMCLDKRRR--- 506
            D +FA     K  + I   +  ++  LP+D H+  + + +LF+ P   M L   R+   
Sbjct: 471 EDKVFASKGRTKIDMPIKNRKNDTHYLLPDDFHFSTDRITRLFIKPGQKMSLFSHRKHTR 530

Query: 507 --------RKSSVERQQTDDHEGFPSWGNENMF--------------------------- 531
                    KS+V    +++    P+  +E+ +                           
Sbjct: 531 GDVSSGLFEKSTVSANHSNN--DIPTIADEHFWADNYERKEQEEKEKEQSKEVGDVVGGA 588

Query: 532 -DGQFDDGNDPSD----VEGSD-------TLVSQPRQ-----VQKVEVEYDKTSKQVDVQ 574
            D  F+D  D  D     EG+D        L  Q  +     +++ +V Y + SK+VDV+
Sbjct: 589 LDNPFEDDMDGVDFNQAFEGTDDNEEASVKLDLQDDEDHKFPIRENKVTYSRVSKKVDVR 648

Query: 575 TLKETIWVHI---------QESPQMAAQDPE--------KTVSFRSLLSSFPSGCRAAAT 617
            LK+ +W  I         +++ + ++ D E        K + F  ++    S   +  T
Sbjct: 649 RLKKNVWRSINNLIQEHDSRKNREQSSNDSETHTEDESTKELKFSDIIQGI-SKMYSDDT 707

Query: 618 IKDISPHLCFICLLHLANEHSLSIQGCANLDDLSI 652
           +KDIS   CFICLLHLANEH L I    N +DL +
Sbjct: 708 LKDISTSFCFICLLHLANEHGLQITHTENYNDLIV 742

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. The condensin complex probably also plays a role during interphase.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9Y7R3|CND2_SCHPO Condensin complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cnd2 PE=1 SV=1

 Score =  127 bits (318), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 127/231 (54%), Gaps = 10/231 (4%)

Query: 31  NDDGLERAKARA-ARAAAIRRKPVTVHYPLPQH---GHSDSCLGKDQI--LELFHNCIKL 84
           NDD LE+ +A+  +R     R+   +H   P+     +S       Q+  L  F   IKL
Sbjct: 18  NDDALEKKRAKENSRKQRELRRSSALHSITPRRESLNNSSPFNSSHQVPVLSNFEEWIKL 77

Query: 85  ASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSE 144
           A++NKIN  NTW   LID+  ++  + +  D+  NFQKASCTL+  VKIY+ R+DSV +E
Sbjct: 78  ATDNKINSTNTWNFALIDYFHDMSLLRDGEDI--NFQKASCTLDGCVKIYTSRIDSVATE 135

Query: 145 AYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKK 204
             K+L G+    +  +Q    ED  A +   +   KK+ ++    + TL   FE++  KK
Sbjct: 136 TGKLLSGLANDSKVLQQTEEGED--AENDDEDLQKKKERKRAQRSVKTLVKDFESIRAKK 193

Query: 205 FDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQEVPGKGM 255
           F+   + DPL+ +  A FDE GAKGLL+N+L V    +++FDS +   K +
Sbjct: 194 FELECSFDPLFKKMCADFDEDGAKGLLMNHLCVDQHGRIVFDSSDTVIKDL 244

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. The condensin complex probably also plays a role during interphase in processes such as DNA repair.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	655
297739187	669	unnamed protein product [Vitis vinifera]	0.987	0.967	0.707	0.0
225447089	674	PREDICTED: condensin complex subunit 2-l	0.989	0.961	0.701	0.0
297826699	704	predicted protein [Arabidopsis lyrata su	0.984	0.916	0.605	0.0
145360548	671	condensin complex subunit 2 [Arabidopsis	0.986	0.962	0.619	0.0
356544788	668	PREDICTED: condensin complex subunit 2-l	0.987	0.968	0.608	0.0
449468466	667	PREDICTED: LOW QUALITY PROTEIN: condensi	0.983	0.965	0.624	0.0
224131626	605	condensin complex components subunit [Po	0.902	0.976	0.636	0.0
3298547	704	hypothetical protein [Arabidopsis thalia	0.984	0.916	0.582	0.0
356517661	680	PREDICTED: LOW QUALITY PROTEIN: condensi	0.981	0.945	0.596	0.0
255576899	584	Condensin complex subunit, putative [Ric	0.864	0.969	0.651	0.0

>gi|297739187|emb|CBI28838.3| unnamed protein product [Vitis vinifera]

 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/667 (70%), Positives = 545/667 (81%), Gaps = 20/667 (2%)

Query: 1   MAETLSP----LRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVH 56
           MAETLSP    +++Q+  +++RIQSPTSPFFLGSNDD LERA+ARAARAA+IRRK V  H
Sbjct: 1   MAETLSPNPATVQKQRALMSARIQSPTSPFFLGSNDDQLERAQARAARAASIRRKSVAAH 60

Query: 57  YPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDV 116
              P     D CLGK+QILELF NCIKLASENKINQKNTWELNLIDHLCEIIKVEEE+D 
Sbjct: 61  --APPPPDPDPCLGKEQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEEEDDA 118

Query: 117 ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHRE 176
           ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINR GQENEQD  VED N +S   E
Sbjct: 119 ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRVGQENEQDNVVEDANVNSEQEE 178

Query: 177 GYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLG 236
           G+SKK++++K+SPLSTLESSFE LN+KKFD AFAVDPLYHQTSAQFDEGGAKGLLLNNLG
Sbjct: 179 GHSKKELDRKISPLSTLESSFEVLNLKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLG 238

Query: 237 VYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTI 296
           VY GC+VLFDS E+PG  MSCA++   SDTIDLSFA E IEQMVLNM+ KDEISPTLR I
Sbjct: 239 VYGGCRVLFDSFEIPGNCMSCATELDKSDTIDLSFAKESIEQMVLNMRTKDEISPTLRNI 298

Query: 297 VNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDEN 356
           V+++DE+N+R  DTFSS  K  +QV +V+ NEAESD  AF++C T  F HDD++S+VDE+
Sbjct: 299 VDRFDENNQRPLDTFSSAHKSEEQVNSVY-NEAESDVDAFENCNTWTFDHDDRTSVVDED 357

Query: 357 LGGSDPTFTSYLE--------DPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKA 408
             G+DP F  + E        +PD DDRFERVD+YLFL+LGF+SKQNAWAGPDHWKYRK 
Sbjct: 358 SYGADPVFPVHHEESGPFTVVEPDMDDRFERVDDYLFLSLGFASKQNAWAGPDHWKYRKV 417

Query: 409 KGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIP 468
           KGP    +DDPA E GSP+ TK+ RG++Q EPDIDF KALD++  D+FAPPKNPKSL +P
Sbjct: 418 KGP----EDDPATEKGSPLTTKRARGKKQAEPDIDFTKALDKEISDVFAPPKNPKSLFLP 473

Query: 469 GNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNE 528
            NRAP NT LPEDCHYQPE+L+KLFLLPN+MCL +RRRR S   RQQ DD    PSW +E
Sbjct: 474 ANRAPCNTKLPEDCHYQPENLVKLFLLPNIMCLGRRRRRFSDESRQQVDDFGVSPSWDDE 533

Query: 529 NMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESP 588
           N FD  FD+GN  SD+E S TLVSQPRQV K+EV+YDKTSKQVDVQ LKET+W H+Q+S 
Sbjct: 534 NGFDDAFDNGNFHSDLEDSSTLVSQPRQVNKIEVQYDKTSKQVDVQALKETLWGHMQKST 593

Query: 589 QMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLD 648
           Q + +D E+ VSFR +L+SFP   RAAA ++DISPHLCFICLLHLANEH LSI GCA+LD
Sbjct: 594 QSSVKD-EEAVSFRHILASFPDHSRAAAAMEDISPHLCFICLLHLANEHGLSINGCADLD 652

Query: 649 DLSIILP 655
           DLSI LP
Sbjct: 653 DLSIHLP 659

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447089|ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]

 Score =  913 bits (2360), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/671 (70%), Positives = 544/671 (81%), Gaps = 23/671 (3%)

Query: 1   MAETLSP----LRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVH 56
           MAETLSP    +++Q+  +++RIQSPTSPFFLGSNDD LERA+ARAARAA+IRRK V  H
Sbjct: 1   MAETLSPNPATVQKQRALMSARIQSPTSPFFLGSNDDQLERAQARAARAASIRRKSVAAH 60

Query: 57  YPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDV 116
              P     D CLGK+QILELF NCIKLASENKINQKNTWELNLIDHLCEIIKVEEE+D 
Sbjct: 61  --APPPPDPDPCLGKEQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEEEDDA 118

Query: 117 ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHRE 176
           ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINR GQENEQD  VED N +S   E
Sbjct: 119 ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRVGQENEQDNVVEDANVNSEQEE 178

Query: 177 GYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLG 236
           G+SKK++++K+SPLSTLESSFE LN+KKFD AFAVDPLYHQTSAQFDEGGAKGLLLNNLG
Sbjct: 179 GHSKKELDRKISPLSTLESSFEVLNLKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLG 238

Query: 237 VYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTI 296
           VY GC+VLFDS E+PG  MSCA++   SDTIDLSFA E IEQMVLNM+ KDEISPTLR I
Sbjct: 239 VYGGCRVLFDSFEIPGNCMSCATELDKSDTIDLSFAKESIEQMVLNMRTKDEISPTLRNI 298

Query: 297 VNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDEN 356
           V+++DE+N+R  DTFSS  K  +QV +V+ NEAESD  AF++C T  F HDD++S+VDE+
Sbjct: 299 VDRFDENNQRPLDTFSSAHKSEEQVNSVY-NEAESDVDAFENCNTWTFDHDDRTSVVDED 357

Query: 357 LGGSDPTFTSYLE--------DPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKA 408
             G+DP F  + E        +PD DDRFERVD+YLFL+LGF+SKQNAWAGPDHWKYRK 
Sbjct: 358 SYGADPVFPVHHEESGPFTVVEPDMDDRFERVDDYLFLSLGFASKQNAWAGPDHWKYRKV 417

Query: 409 KGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIP 468
           KGP    +DDPA E GSP+ TK+ RG++Q EPDIDF KALD++  D+FAPPKNPKSL +P
Sbjct: 418 KGP----EDDPATEKGSPLTTKRARGKKQAEPDIDFTKALDKEISDVFAPPKNPKSLFLP 473

Query: 469 GNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNE 528
            NRAP NT LPEDCHYQPE+L+KLFLLPN+MCL +RRRR S   RQQ DD    PSW +E
Sbjct: 474 ANRAPCNTKLPEDCHYQPENLVKLFLLPNIMCLGRRRRRFSDESRQQVDDFGVSPSWDDE 533

Query: 529 NMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESP 588
           N FD  FD+GN  SD+E S TLVSQPRQV K+EV+YDKTSKQVDVQ LKET+W H+Q+S 
Sbjct: 534 NGFDDAFDNGNFHSDLEDSSTLVSQPRQVNKIEVQYDKTSKQVDVQALKETLWGHMQKST 593

Query: 589 QMAAQDP----EKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGC 644
           Q + +      E+ VSFR +L+SFP   RAAA ++DISPHLCFICLLHLANEH LSI GC
Sbjct: 594 QSSVKVSEYLDEEAVSFRHILASFPDHSRAAAAMEDISPHLCFICLLHLANEHGLSINGC 653

Query: 645 ANLDDLSIILP 655
           A+LDDLSI LP
Sbjct: 654 ADLDDLSIHLP 664

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826699|ref|XP_002881232.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297327071|gb|EFH57491.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/712 (60%), Positives = 513/712 (72%), Gaps = 67/712 (9%)

Query: 1   MAETLSPLRRQKVA-IASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPL 59
           M E+L+P  +Q+ A   +RIQ+PTSPFFLGSNDD LER +ARAARAAA RR+ V      
Sbjct: 1   MDESLTPNPKQRPASTTTRIQAPTSPFFLGSNDDRLEREQARAARAAASRRRSVIFACGP 60

Query: 60  PQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETN 119
                SD C  K QILELF NCIKLASENKINQKNTWELNLIDHLCEIIKVE+EN+ ETN
Sbjct: 61  QPESESDPCFDKQQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDENNAETN 120

Query: 120 FQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYS 179
           FQKASCTLEAGVKIYS+RVDSVHSEAYKVLGGI RAG ++  D   ED  A +V      
Sbjct: 121 FQKASCTLEAGVKIYSMRVDSVHSEAYKVLGGITRAGHDDSGDN--EDA-AGTVENATNQ 177

Query: 180 KKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYT 239
           KK  EKK+SPLSTLE SF+ALNVKKFD AFAVDPLYHQTSAQFDEGGAKGLLLNNLGVY 
Sbjct: 178 KKQTEKKISPLSTLEPSFDALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYG 237

Query: 240 GCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFAS-------------------------- 273
           GCQVLFDSQE+PGK +S A++H  S+TIDLSFA                           
Sbjct: 238 GCQVLFDSQEIPGKLVSSANKHDKSETIDLSFAKGLALLADMPRSTIVHVLLHYAFSEFV 297

Query: 274 ----EYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEA 329
               E +EQMVLNM+ KDEI P+LR I+NQ+DE+N+R SDTFS  Q+  +  +  H N+A
Sbjct: 298 VKFVECVEQMVLNMRKKDEIVPSLRAIINQFDEENQRPSDTFSCGQQTTESFDISHANDA 357

Query: 330 E--SDGVAFDDCGTNDFYHDDQSSIVDENLGGSD--PTFTSY--------LEDPDTDDRF 377
               D   +++ GT+ F ++ QS  VDEN G +D  PT++++        L+D D++DR 
Sbjct: 358 SYADDDEGYENFGTS-FDYEGQSGDVDENFGLNDAEPTYSNFHEEVEPASLQDLDSEDRL 416

Query: 378 ERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQ 437
           E VD+YLFL+LG SSKQN+WAGPDHWKYRK KGP   S    A E  S    KK R ++Q
Sbjct: 417 ENVDDYLFLSLGISSKQNSWAGPDHWKYRKTKGPDVQS----ASENKSSPPAKKTRKKKQ 472

Query: 438 PEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPN 497
            EP++DF KAL+E+ PD+FAPPKNPKSLL+P +R P  T LPEDCHYQPE+LIKLFLLPN
Sbjct: 473 AEPELDFTKALEEEMPDIFAPPKNPKSLLLPASRTPCQTKLPEDCHYQPENLIKLFLLPN 532

Query: 498 VMCLDKRRRRKSSVE--RQQTDDHEGFPSWGNENMF--DGQFDDGNDPSDVEGSDTLVSQ 553
           VMCL  RRRRKSS E  RQQ DD+E   SWGN+N++  DG FD+GND SD E +++L+SQ
Sbjct: 533 VMCL-GRRRRKSSGETSRQQHDDYEHAESWGNDNVYDDDGTFDNGNDQSDAEDTNSLISQ 591

Query: 554 PRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMA-----------AQDPEKTVSFR 602
           PRQV K+EV+YDK SKQVDVQ LKET+W  +QES Q              Q+P ++ SF+
Sbjct: 592 PRQVNKIEVQYDKASKQVDVQVLKETLWECLQESHQPPIQNLIVQDEEHQQEPPESRSFK 651

Query: 603 SLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSIIL 654
            LL+SFP  C+AA   +DISPHLCFICLLHLANEH+LS+ G  NLDDL+I L
Sbjct: 652 ELLASFPDDCQAAGATQDISPHLCFICLLHLANEHNLSLVGSQNLDDLTIHL 703

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145360548|ref|NP_180818.2| condensin complex subunit 2 [Arabidopsis thaliana] gi|75217252|sp|Q564K3.1|CND2_ARATH RecName: Full=Condensin complex subunit 2; AltName: Full=Chromosome-associated protein H; Short=AtCAP-H; AltName: Full=Non-SMC condensin I complex subunit H; AltName: Full=Protein EMBRYO DEFECTIVE 2795 gi|62533251|dbj|BAD95575.1| chromosome associate protein subunit H [Arabidopsis thaliana] gi|330253609|gb|AEC08703.1| condensin complex subunit 2 [Arabidopsis thaliana]

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/678 (61%), Positives = 504/678 (74%), Gaps = 32/678 (4%)

Query: 1   MAETLSPLRRQKVA-IASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPL 59
           M E+L+P  +QK A   +RIQ+PTSPFFLGSNDD LER +ARAARAAA RR+ V      
Sbjct: 1   MDESLTPNPKQKPASTTTRIQAPTSPFFLGSNDDRLEREQARAARAAASRRRSVIFARGS 60

Query: 60  PQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETN 119
                SD C  K QILELF NCIKLASENKINQKNTWELNLIDHLCEIIKVE+EN+ ETN
Sbjct: 61  QPETESDPCFDKQQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDENNTETN 120

Query: 120 FQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYS 179
           FQKASCTLEAGVKIYS+RVDSVHSEAYKVLGGI RAG ++  D    +  A +V      
Sbjct: 121 FQKASCTLEAGVKIYSMRVDSVHSEAYKVLGGITRAGHDDGGD---HEDAAGAVENATNQ 177

Query: 180 KKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYT 239
           KK  EKK+SPLSTLE SF+ALNVKKFD AFAVDPLYHQTSAQFDEGGAKGLLLNNLGVY 
Sbjct: 178 KKQPEKKISPLSTLEPSFDALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYG 237

Query: 240 GCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQ 299
           GCQVLFDSQE+PGK +S A++H  S+TIDLSF  E +EQMVLNM+ KDEI P+LR I+NQ
Sbjct: 238 GCQVLFDSQEIPGKLVSSANKHDKSETIDLSFVKECVEQMVLNMRKKDEIVPSLRAIINQ 297

Query: 300 YDEDNRRSSDTFSSIQKLVDQVEAVHNNEAE--SDGVAFDDCGTNDFYHDDQSSIVDENL 357
           +DE+N+R SDTFS  Q+  +  +  H N+A    D   +++ GT+ F ++ QS  VDEN 
Sbjct: 298 FDEENQRPSDTFSCGQQTTESFDISHGNDASYADDDEGYENFGTS-FDYEGQSGDVDENF 356

Query: 358 GG--SDPTFTSY--------LEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRK 407
           G   ++P ++++        L+D D+DDR E VD+YLFL+LG SSKQN+WAGPDHWKYRK
Sbjct: 357 GPNEAEPIYSNFHEEVEPASLQDMDSDDRLENVDDYLFLSLGISSKQNSWAGPDHWKYRK 416

Query: 408 AKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLI 467
            KGP       PA E  S    KK R ++Q EP++DF KAL+E+ PD+FAPPKNPK+LL+
Sbjct: 417 TKGP----DVQPASEIKSSPPAKKTRKKKQAEPELDFAKALEEEMPDIFAPPKNPKTLLL 472

Query: 468 PGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSS-VERQQTDDHEGFPSWG 526
           P +R P  T LPEDCHYQPE+LIKLFLLPNVMCL +RRR+ S    RQQ DD+E   SWG
Sbjct: 473 PASRTPCQTKLPEDCHYQPENLIKLFLLPNVMCLGRRRRKNSGETSRQQPDDYEHGESWG 532

Query: 527 NENMF----DGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWV 582
           N+N++        D+ ND SD E ++TL+SQPRQV K++V+YDK SKQVDVQ LKET+W 
Sbjct: 533 NDNVYDDDDGPFDDNENDQSDAEDTNTLISQPRQVNKIDVQYDKASKQVDVQVLKETLWE 592

Query: 583 HIQESPQMAAQD------PEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANE 636
            +QES Q   QD      P ++ SF+ LL+SFP  C+AA   +DISPHLCFICLLHLANE
Sbjct: 593 CLQESHQPPIQDEEHQQEPPESRSFKVLLASFPDDCQAAERTQDISPHLCFICLLHLANE 652

Query: 637 HSLSIQGCANLDDLSIIL 654
           H+LS+ G  NLDDL+I L
Sbjct: 653 HNLSLIGSQNLDDLTIHL 670

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544788|ref|XP_003540829.1| PREDICTED: condensin complex subunit 2-like [Glycine max]

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/666 (60%), Positives = 487/666 (73%), Gaps = 19/666 (2%)

Query: 1   MAETLSPLRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPLP 60
           MAETLSP          RI SPTSPF LGSNDD LERA+AR ARA AIRRK + ++ PL 
Sbjct: 1   MAETLSPNPTMDQKQRLRILSPTSPFILGSNDDKLERAQARDARATAIRRKSLALNQPL- 59

Query: 61  QHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNF 120
              +SD CL K QI++LF NCIKLASENKINQKNTWELNLIDHL +IIK EEEND ETNF
Sbjct: 60  -QPNSDPCLNKQQIIDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDAETNF 118

Query: 121 QKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSK 180
           QKASCTLEAGVKIYSLRVDSVHSEAYKVLGG+NRAGQE E+DT +   N  S   E  S+
Sbjct: 119 QKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEDTTLNGVNIESGQVE--SR 176

Query: 181 KDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTG 240
           K+  KKLSPLSTLESSFEALNVKKFDAAF VDPLY QT+A+FDEGGAKGLL+NNLGVY  
Sbjct: 177 KETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGD 236

Query: 241 CQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQY 300
           C+VLFDSQEVP K M+  +Q  +SDTIDLSFA + I+QMVL+M+ KDEISP+LRTIVNQ+
Sbjct: 237 CRVLFDSQEVPAKCMASQNQSDISDTIDLSFAKDCIDQMVLDMRVKDEISPSLRTIVNQF 296

Query: 301 DEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDENLGGS 360
           DE NRR +D     Q   + ++   NNE       +++C       DDQ+ + D     +
Sbjct: 297 DESNRRPADIQLQGQNSAEDLDNADNNENGFYREEYENCMAWSDDRDDQTVVADPGYNDA 356

Query: 361 DPTFTSYLEDP---------DTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGP 411
           DP+F SY +D          D D RFE VD YLFL+LGFSSKQNAWAGPDHWKYRK+K  
Sbjct: 357 DPSFPSYPQDNDEPFPSPEIDMDGRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRKSK-- 414

Query: 412 VEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNR 471
              S+  P  E GS +++++ + +RQ E D++F  +L++K  D F+PPKNPK LL+P +R
Sbjct: 415 --VSEVHPTSEDGSTLKSRQPKSKRQTEVDLNFTNSLEKKMLDTFSPPKNPKLLLLPESR 472

Query: 472 APSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMF 531
            P NT LPEDCHYQPEDL+KLFLL NV CL ++  R S   R+Q+D++E FPSW N ++ 
Sbjct: 473 LPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSDGSREQSDEYESFPSWDNGSVC 532

Query: 532 DGQFDDGNDP--SDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQ 589
                D       D+E +DTLV+QPRQV K+EV+YDKTSKQVDV  LK T+W H+QES +
Sbjct: 533 GDDAGDYGGDLHGDMEDTDTLVTQPRQVSKIEVQYDKTSKQVDVHALKITLWDHVQESVK 592

Query: 590 MAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDD 649
           +  +  + T+SFR++L++FPS C AAATI DISPHLCFICLLHLANE  LSIQ   NLDD
Sbjct: 593 LPLEGQKDTLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNSPNLDD 652

Query: 650 LSIILP 655
           L+I  P
Sbjct: 653 LAIRFP 658

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468466|ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like [Cucumis sativus] gi|449490353|ref|XP_004158580.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like [Cucumis sativus]

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/669 (62%), Positives = 497/669 (74%), Gaps = 25/669 (3%)

Query: 1   MAETLSP----LRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVH 56
           MAETLSP     ++Q+  + S++QSPTSPFFLGSNDD LERA+ARAARAAA RRK +  +
Sbjct: 1   MAETLSPNPSIPQKQRRPVPSQLQSPTSPFFLGSNDDKLERAQARAARAAANRRKSIATN 60

Query: 57  YPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDV 116
             LP+    +  L K QILELF NCIKLASENKINQKNTWELNLIDHL EIIKVEEE D 
Sbjct: 61  L-LPRQD-PNIFLDKRQILELFQNCIKLASENKINQKNTWELNLIDHLAEIIKVEEE-DT 117

Query: 117 ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHRE 176
           ETNFQKASCTLEAGVKIYSLRVD+ HSEAYKVLGG+NRAGQENEQ+T  ++ N  +   E
Sbjct: 118 ETNFQKASCTLEAGVKIYSLRVDATHSEAYKVLGGMNRAGQENEQETITQEGNPENDQEE 177

Query: 177 GYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLG 236
             S+K+ +KKLSPLSTLE SFEALNVKKFD AFAVDPLYHQTSAQFDEGGAKGLL+NNLG
Sbjct: 178 VRSRKEQDKKLSPLSTLEPSFEALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLMNNLG 237

Query: 237 VYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTI 296
           VY  C+VLFDS EVPGK MS  ++   SD ID+SFA + IE+MVLNM+ KDEISPTLR I
Sbjct: 238 VYGACRVLFDSDEVPGKCMSFENRQGSSDMIDISFAKDCIEEMVLNMRVKDEISPTLRNI 297

Query: 297 VNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDEN 356
           VN +DEDN R SD  SS  K  +QV   ++ +    G  F++ GT ++ +DDQ+S+VD+ 
Sbjct: 298 VNLFDEDNIRPSDYCSSGPKAAEQVHMDYDVDDRFHGDDFENFGTENYDNDDQTSMVDDG 357

Query: 357 LGGSDPTFTSYLE--------DPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRKA 408
            GG D  F++Y E        DPD ++R   VDEYL   LGF+ +QNAWAGP+HWKYRK 
Sbjct: 358 PGGGDADFSTYNEESVSTTYHDPDVEERLGNVDEYLISCLGFTVRQNAWAGPEHWKYRKT 417

Query: 409 KGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIP 468
           K    GS+D P  E G    TK+ R ++Q E DIDF K L+++  DLF PP+NPKSLL+P
Sbjct: 418 K----GSRDSPT-ENGLETTTKRARSKKQAENDIDFTKNLEKEVTDLFVPPRNPKSLLLP 472

Query: 469 GNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNE 528
            NRAP NT LPEDCHYQPEDL+KLFLLPNV CL ++ R+ S       DD+   PSW ++
Sbjct: 473 KNRAPCNTKLPEDCHYQPEDLVKLFLLPNVKCLRRKGRQHSDEPMHHNDDYGTMPSWEDD 532

Query: 529 NMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESP 588
           N F GQFD+G+  SDVE  D LV+QPRQV KVEV+YDK SKQVDVQ LKET+W H+QES 
Sbjct: 533 NDFGGQFDEGDGQSDVEDPDALVTQPRQVNKVEVQYDKKSKQVDVQALKETLWSHLQESQ 592

Query: 589 -----QMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQG 643
                   AQ   +  SF+ +L++FP  CRAA TI DISPHLCFICLLHLANEH LSI+G
Sbjct: 593 TDTEVSXHAQLLYEMASFKQILATFPDDCRAAQTINDISPHLCFICLLHLANEHGLSIKG 652

Query: 644 CANLDDLSI 652
             +L+DL+I
Sbjct: 653 SDHLNDLTI 661

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131626|ref|XP_002321137.1| condensin complex components subunit [Populus trichocarpa] gi|222861910|gb|EEE99452.1| condensin complex components subunit [Populus trichocarpa]

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/668 (63%), Positives = 484/668 (72%), Gaps = 77/668 (11%)

Query: 1   MAETLSPLRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPLP 60
           M E LSP +R       RIQSPTSPFFLGSNDD LERA+ARAARAAAIRRK +  H   P
Sbjct: 1   MGEILSPKQR-----LPRIQSPTSPFFLGSNDDNLERAQARAARAAAIRRKTIAAHSQPP 55

Query: 61  QHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNF 120
                D CL K QIL+LFHNCIKLASENKINQKNTWELNLIDHL EIIKVEEE+D ETNF
Sbjct: 56  PLQDPDPCLDKQQILDLFHNCIKLASENKINQKNTWELNLIDHLAEIIKVEEESDTETNF 115

Query: 121 QKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSK 180
           QKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAG E+E +  ++              
Sbjct: 116 QKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGLEDEPEDFMQ-------------- 161

Query: 181 KDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTG 240
                 +SPLSTLE SFEALNVKKFD AFAVDPLYHQTSAQFDEGGAKGLLLNNLGVY G
Sbjct: 162 ------ISPLSTLEPSFEALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYGG 215

Query: 241 CQVLFDSQEVPGKGMSCASQHSMSDTIDLSFAS----------EYIEQMVLNMQAKDEIS 290
           C+VLFDSQEVPGK  SC +Q    D I+LSFA           +YIEQMVLNM+ +DEIS
Sbjct: 216 CRVLFDSQEVPGKCTSCENQREGLDMIELSFARGVRQFLIYFPDYIEQMVLNMRTQDEIS 275

Query: 291 PTLRTIVNQYDEDNRRSSDTFSSIQKLVDQV---EAVHNNEAESDGVAFDDCGTNDFYHD 347
           PTL TIV+Q+DEDN+R  + F   Q   DQ    +  +NNE E DG   ++CG    +++
Sbjct: 276 PTLGTIVDQFDEDNKRPLNIFPCHQTCGDQFHEDDRTYNNEVEFDGETHENCGP---WNE 332

Query: 348 DQSSIVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRK 407
            +  + D               +PDTDDRF++VD  LFL+LGF+SK+N WAGPDHWKY+K
Sbjct: 333 REPHLFD---------------NPDTDDRFDKVDWPLFLSLGFTSKRNDWAGPDHWKYQK 377

Query: 408 AKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLI 467
            K            E GSPV TK+ + +++ E DIDF KALDE+ PD+FAPPKN KSLL+
Sbjct: 378 VK------------EEGSPVITKRPKTKKKTEVDIDFTKALDEEMPDVFAPPKNAKSLLL 425

Query: 468 PGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGN 527
           P NR   NTTLPEDCHYQPEDL KLFLLPN+M +D+         RQQ DD    PSW  
Sbjct: 426 PANRPQCNTTLPEDCHYQPEDLAKLFLLPNIM-IDET--------RQQADDCGPLPSWDG 476

Query: 528 ENMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQES 587
           E+ F GQFDDG+  SDVE  +TLV+QPRQV K+EV YDK SKQVDVQTLKET+W HIQES
Sbjct: 477 ESAFAGQFDDGDAYSDVEDPNTLVTQPRQVNKIEVHYDKASKQVDVQTLKETLWHHIQES 536

Query: 588 PQMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANL 647
           PQM  QD E+ VSFR LL+SFPS CRAAATIK+ISPHLCFICLLHLANEH LSI+GCA+L
Sbjct: 537 PQMPVQDQEEAVSFRDLLASFPSDCRAAATIKEISPHLCFICLLHLANEHGLSIRGCASL 596

Query: 648 DDLSIILP 655
           +DLSI  P
Sbjct: 597 NDLSIHFP 604

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3298547|gb|AAC25941.1| hypothetical protein [Arabidopsis thaliana]

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/712 (58%), Positives = 499/712 (70%), Gaps = 67/712 (9%)

Query: 1   MAETLSPLRRQKVA-IASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPL 59
           M E+L+P  +QK A   +RIQ+PTSPFFLGSNDD LER +ARAARAAA RR+ V      
Sbjct: 1   MDESLTPNPKQKPASTTTRIQAPTSPFFLGSNDDRLEREQARAARAAASRRRSVIFARGS 60

Query: 60  PQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETN 119
                SD C  K QILELF NCIKLASENKINQKNTWELNLIDHLCEIIKVE+EN+ ETN
Sbjct: 61  QPETESDPCFDKQQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDENNTETN 120

Query: 120 FQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYS 179
           FQKASCTLEAGVKIYS+RVDSVHSEAYKVLGGI RAG ++  D    +  A +V      
Sbjct: 121 FQKASCTLEAGVKIYSMRVDSVHSEAYKVLGGITRAGHDDGGD---HEDAAGAVENATNQ 177

Query: 180 KKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYT 239
           KK  EKK+SPLSTLE SF+ALNVKKFD AFAVDPLYHQTSAQFDEGGAKGLLLNNLGVY 
Sbjct: 178 KKQPEKKISPLSTLEPSFDALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYG 237

Query: 240 GCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFAS-------------------------- 273
           GCQVLFDSQE+PGK +S A++H  S+TIDLSF                            
Sbjct: 238 GCQVLFDSQEIPGKLVSSANKHDKSETIDLSFVKGLALLADMPRSTIVHVLLHYAFSDVV 297

Query: 274 ----EYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEA 329
               E +EQMVLNM+ KDEI P+LR I+NQ+DE+N+R SDTFS  Q+  +  +  H N+A
Sbjct: 298 VKFVECVEQMVLNMRKKDEIVPSLRAIINQFDEENQRPSDTFSCGQQTTESFDISHGNDA 357

Query: 330 E--SDGVAFDDCGTNDFYHDDQSSIVDENLGG--SDPTFTSY--------LEDPDTDDRF 377
               D   +++ GT+ F ++ QS  VDEN G   ++P ++++        L+D D+DDR 
Sbjct: 358 SYADDDEGYENFGTS-FDYEGQSGDVDENFGPNEAEPIYSNFHEEVEPASLQDMDSDDRL 416

Query: 378 ERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQ 437
           E VD+YLFL+LG SSKQN+WAGPDHWKYRK KGP       PA E  S    KK R ++Q
Sbjct: 417 ENVDDYLFLSLGISSKQNSWAGPDHWKYRKTKGP----DVQPASEIKSSPPAKKTRKKKQ 472

Query: 438 PEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPN 497
            EP++DF KAL+E+ PD+FAPPKNPK+LL+P +R P  T LPEDCHYQPE+LIKLFLLPN
Sbjct: 473 AEPELDFAKALEEEMPDIFAPPKNPKTLLLPASRTPCQTKLPEDCHYQPENLIKLFLLPN 532

Query: 498 VMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMF----DGQFDDGNDPSDVEGSDTLVSQ 553
           VM     + R S   RQQ DD+E   SWGN+N++        D+ ND SD E ++TL+SQ
Sbjct: 533 VMVW-LAKHRPSETSRQQPDDYEHGESWGNDNVYDDDDGPFDDNENDQSDAEDTNTLISQ 591

Query: 554 PRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMAA-----------QDPEKTVSFR 602
           PRQV K++V+YDK SKQVDVQ LKET+W  +QES Q              Q+P ++ SF+
Sbjct: 592 PRQVNKIDVQYDKASKQVDVQVLKETLWECLQESHQPPIQNLIVQDEEHQQEPPESRSFK 651

Query: 603 SLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLSIIL 654
            LL+SFP  C+AA   +DISPHLCFICLLHLANEH+LS+ G  NLDDL+I L
Sbjct: 652 VLLASFPDDCQAAERTQDISPHLCFICLLHLANEHNLSLIGSQNLDDLTIHL 703

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517661|ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like [Glycine max]

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/682 (59%), Positives = 502/682 (73%), Gaps = 39/682 (5%)

Query: 1   MAETLSPL----RRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVH 56
           MAETLSP     R+Q++    RIQSPTSPF LGSN+D LERA+AR ARAAA RRK + ++
Sbjct: 1   MAETLSPNPAMGRKQRL----RIQSPTSPFVLGSNNDQLERARARDARAAANRRKSLALN 56

Query: 57  YPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDV 116
            PL  + H    L K QIL+LF NCIKLASENKINQKNTWELNLIDHL +IIK EEE+D 
Sbjct: 57  QPLQANSHPG--LNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEEHDA 114

Query: 117 ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHRE 176
           ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGG+NRAGQE E+DT ++  N  S  R+
Sbjct: 115 ETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEDTTLDGVNIES--RQ 172

Query: 177 GYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLG 236
             S+K+  KKLSPLSTLESSFEALNVKKFDAAF VDPLY QT+A+FDEGGAKGLL+NNLG
Sbjct: 173 EESRKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLG 232

Query: 237 VYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSF-----ASEY---IEQMVLNMQAKDE 288
           VY GC+VLFDSQEVP K M+  +Q  +SDTIDLSF       EY   I+QMVL+M+ KDE
Sbjct: 233 VYGGCRVLFDSQEVPAKCMASQNQSDISDTIDLSFLKGLXCPEYYDCIDQMVLDMRVKDE 292

Query: 289 ISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFYHDD 348
           ISP+LRTIVNQ+DE NRR +D         + ++   NNE   D   +++C      HDD
Sbjct: 293 ISPSLRTIVNQFDESNRRPTDIQLQGPSSAEDLDNADNNENGFDREEYENCTAWSDDHDD 352

Query: 349 QSSIVDENLGGSDPTFTSYLED---------PDTDDRFERVDEYLFLNLGFSSKQNAWAG 399
           Q+ + D +   +DP+F+SY +D          D DDRFE V+ YLFL+LGFSSKQNAWAG
Sbjct: 353 QTVVADLDYNDADPSFSSYPQDNAEQFPSPETDMDDRFENVEGYLFLSLGFSSKQNAWAG 412

Query: 400 PDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPP 459
           PDHWKYRK+K     S+  P  E GS +++++ + +RQ E D++F  +L++K  D F+PP
Sbjct: 413 PDHWKYRKSK----VSEVHPTSEDGSTLKSRQPKSKRQTEVDLNFTDSLEKKVLDTFSPP 468

Query: 460 KNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKS----SVERQQ 515
           KNPK LL+P +R P NT LPEDCHYQPEDL+KLFLL NV CL ++  R S    +  R+Q
Sbjct: 469 KNPKLLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRKANRFSGKICNGSREQ 528

Query: 516 TDDHEGFPSWGNENMFDGQFDDGNDP--SDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDV 573
           ++++E FPSW N ++      D      SD+E S+TL++QPRQV K+EV+YDKTSKQVDV
Sbjct: 529 SNEYESFPSWDNGSVCGDDAGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDV 588

Query: 574 QTLKETIWVHIQESPQMAAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHL 633
             LK T+W H+QES ++  +  + T+SF+++L++FPS C AAATI DISPHLCFICLLHL
Sbjct: 589 HALKITLWDHVQESVKLPLEGQKDTLSFKNILANFPSECNAAATISDISPHLCFICLLHL 648

Query: 634 ANEHSLSIQGCANLDDLSIILP 655
           ANE  LSIQ  +NLDDL+I LP
Sbjct: 649 ANEKGLSIQNSSNLDDLAIRLP 670

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576899|ref|XP_002529335.1| Condensin complex subunit, putative [Ricinus communis] gi|223531206|gb|EEF33052.1| Condensin complex subunit, putative [Ricinus communis]

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/606 (65%), Positives = 460/606 (75%), Gaps = 40/606 (6%)

Query: 1   MAETLSP--LRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYP 58
           MAE LSP  + +Q++    RIQSPT+PF LGSNDD LERA+ARAARAAAIRRK +T +  
Sbjct: 1   MAEILSPNAILKQRLP---RIQSPTAPFILGSNDDKLERAQARAARAAAIRRKLITSNTT 57

Query: 59  LPQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVET 118
                +SD CL K QIL+LF NCIKLASENKINQKNTWELNLIDHLCEIIKVE+E DVET
Sbjct: 58  NQSGENSDPCLDKQQILDLFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDEQDVET 117

Query: 119 NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGY 178
           NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQ+                
Sbjct: 118 NFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQEVYY------------- 164

Query: 179 SKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVY 238
                  ++S LSTLESSFE+LNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLG+Y
Sbjct: 165 ------TQISHLSTLESSFESLNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGLY 218

Query: 239 TGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVN 298
             C+VLFDSQEVPGK  SC +QH   DTIDLSF  +YIE MVLNMQ   EISPTL+ IVN
Sbjct: 219 GACRVLFDSQEVPGKFTSCENQHERQDTIDLSFTRDYIEHMVLNMQTVAEISPTLKIIVN 278

Query: 299 QYDEDNRRSSDTFSSIQK---LVDQVEAVHNNEAESDGVAFDDCGTNDFYHDDQSSIVDE 355
           Q+DEDN+R  DTF S+QK   ++D+ E+ +N E + DG AF+   T    HD+Q+S+VD+
Sbjct: 279 QFDEDNKRPLDTFPSLQKSSQVLDKDES-YNEEVDFDGNAFESGETWTCEHDEQTSVVDD 337

Query: 356 NLGGSDPTFTSYLED--------PDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRK 407
              G+D +F S  E+        PD DDRF++VD YL  +LGF+SKQNAWAGPDHWKYRK
Sbjct: 338 EPNGADTSFPSIHEENELFSFNGPDMDDRFDKVDSYLSFSLGFTSKQNAWAGPDHWKYRK 397

Query: 408 AKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLI 467
           AKG     +D+   E GSPV  KK + ++Q E DIDF KALDE  PD+F PPKNPKSLL+
Sbjct: 398 AKG----LEDNSTTEEGSPVTAKKPKTKKQAELDIDFTKALDENLPDVFTPPKNPKSLLL 453

Query: 468 PGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGN 527
           P  R P +TTLPEDCHYQPEDL+KLFLLPN+MCL KRRRR     RQ +DD+   PSW +
Sbjct: 454 PATRVPCSTTLPEDCHYQPEDLVKLFLLPNIMCLGKRRRRSQDEPRQHSDDYGAAPSWDD 513

Query: 528 ENMFDGQFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQES 587
            ++F G FDDGN  SDVE  +TLVSQPRQV K+EV+YDKTSKQVDVQ LKET+W H+++S
Sbjct: 514 GSVFGGDFDDGNTQSDVEDPNTLVSQPRQVNKIEVQYDKTSKQVDVQALKETLWHHMEKS 573

Query: 588 PQMAAQ 593
           PQ++ Q
Sbjct: 574 PQVSIQ 579

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	655
TAIR|locus:2060273	671	EMB2795 "EMBRYO DEFECTIVE 2795	0.986	0.962	0.594	1.2e-202
UNIPROTKB|F1MH70	724	NCAPH "Uncharacterized protein	0.687	0.621	0.295	9.3e-43
UNIPROTKB|E9PHA2	730	NCAPH "Condensin complex subun	0.680	0.610	0.292	1.4e-40
UNIPROTKB|Q15003	741	NCAPH "Condensin complex subun	0.680	0.601	0.292	1.6e-40
UNIPROTKB|G4MUD3	871	MGG_01639 "Condensin complex c	0.265	0.199	0.395	5e-37
ASPGD|ASPL0000016922	886	AN4265 [Emericella nidulans (t	0.264	0.195	0.368	6.4e-35
MGI|MGI:2444777	731	Ncaph "non-SMC condensin I com	0.850	0.761	0.283	1.9e-34
SGD|S000000193	754	BRN1 "Subunit of the condensin	0.175	0.152	0.358	1.7e-31
UNIPROTKB|B4E189	605	NCAPH "Condensin complex subun	0.633	0.685	0.275	2.2e-31
UNIPROTKB|C9J470	608	NCAPH "Condensin complex subun	0.680	0.733	0.292	9e-31

TAIR|locus:2060273 EMB2795 "EMBRYO DEFECTIVE 2795" [Arabidopsis thaliana (taxid:3702)]

 Score = 1961 (695.4 bits), Expect = 1.2e-202, P = 1.2e-202
 Identities = 403/678 (59%), Positives = 483/678 (71%)

Query:     1 MAETLSPLRRQKVA-IASRIQSPTSPFFLGSNDDGLEXXXXXXXXXXXXXXXPVTVHYPL 59
             M E+L+P  +QK A   +RIQ+PTSPFFLGSNDD LE                V      
Sbjct:     1 MDESLTPNPKQKPASTTTRIQAPTSPFFLGSNDDRLEREQARAARAAASRRRSVIFARGS 60

Query:    60 PQHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETN 119
                  SD C  K QILELF NCIKLASENKINQKNTWELNLIDHLCEIIKVE+EN+ ETN
Sbjct:    61 QPETESDPCFDKQQILELFQNCIKLASENKINQKNTWELNLIDHLCEIIKVEDENNTETN 120

Query:   120 FQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYS 179
             FQKASCTLEAGVKIYS+RVDSVHSEAYKVLGGI RAG ++  D   ED  A +V      
Sbjct:   121 FQKASCTLEAGVKIYSMRVDSVHSEAYKVLGGITRAGHDDGGDH--EDA-AGAVENATNQ 177

Query:   180 KKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXXXXXXVYT 239
             KK  EKK+SPLSTLE SF+ALNVKKFD AFAVDPLYHQTSAQFDE            VY 
Sbjct:   178 KKQPEKKISPLSTLEPSFDALNVKKFDVAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYG 237

Query:   240 GCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQ 299
             GCQVLFDSQE+PGK +S A++H  S+TIDLSF  E +EQMVLNM+ KDEI P+LR I+NQ
Sbjct:   238 GCQVLFDSQEIPGKLVSSANKHDKSETIDLSFVKECVEQMVLNMRKKDEIVPSLRAIINQ 297

Query:   300 YDEDNRRSSDTFSSIQKLVDQVEAVHNNEAE--SDGVAFDDCGTNDFYHDDQSSIVDENL 357
             +DE+N+R SDTFS  Q+  +  +  H N+A    D   +++ GT+ F ++ QS  VDEN 
Sbjct:   298 FDEENQRPSDTFSCGQQTTESFDISHGNDASYADDDEGYENFGTS-FDYEGQSGDVDENF 356

Query:   358 GGSD--PTFTSY--------LEDPDTDDRFERVDEYLFLNLGFSSKQNAWAGPDHWKYRK 407
             G ++  P ++++        L+D D+DDR E VD+YLFL+LG SSKQN+WAGPDHWKYRK
Sbjct:   357 GPNEAEPIYSNFHEEVEPASLQDMDSDDRLENVDDYLFLSLGISSKQNSWAGPDHWKYRK 416

Query:   408 AKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLI 467
              KGP       PA E  S    KK R ++Q EP++DF KAL+E+ PD+FAPPKNPK+LL+
Sbjct:   417 TKGP----DVQPASEIKSSPPAKKTRKKKQAEPELDFAKALEEEMPDIFAPPKNPKTLLL 472

Query:   468 PGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSS-VERQQTDDHEGFPSWG 526
             P +R P  T LPEDCHYQPE+LIKLFLLPNVMCL +RRR+ S    RQQ DD+E   SWG
Sbjct:   473 PASRTPCQTKLPEDCHYQPENLIKLFLLPNVMCLGRRRRKNSGETSRQQPDDYEHGESWG 532

Query:   527 NENMFD---GQFDDG-NDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWV 582
             N+N++D   G FDD  ND SD E ++TL+SQPRQV K++V+YDK SKQVDVQ LKET+W 
Sbjct:   533 NDNVYDDDDGPFDDNENDQSDAEDTNTLISQPRQVNKIDVQYDKASKQVDVQVLKETLWE 592

Query:   583 HIQESPQMAAQD------PEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANE 636
              +QES Q   QD      P ++ SF+ LL+SFP  C+AA   +DISPHLCFICLLHLANE
Sbjct:   593 CLQESHQPPIQDEEHQQEPPESRSFKVLLASFPDDCQAAERTQDISPHLCFICLLHLANE 652

Query:   637 HSLSIQGCANLDDLSIIL 654
             H+LS+ G  NLDDL+I L
Sbjct:   653 HNLSLIGSQNLDDLTIHL 670

GO:0005634 "nucleus" evidence=ISM

GO:0000793 "condensed chromosome" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006260 "DNA replication" evidence=RCA

GO:0006270 "DNA replication initiation" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0006306 "DNA methylation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA

GO:0016458 "gene silencing" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0031047 "gene silencing by RNA" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

GO:0051726 "regulation of cell cycle" evidence=RCA

UNIPROTKB|F1MH70 NCAPH "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 361 (132.1 bits), Expect = 9.3e-43, Sum P(2) = 9.3e-43
 Identities = 150/508 (29%), Positives = 224/508 (44%)

Query:    73 QILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVE-TNFQKASCTLEAGV 131
             QI E +  CIKL++ENKI  KN + L+LID + EI+K   + D E TNF+ A+ TL+A  
Sbjct:    95 QITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILK---QKDAEPTNFKVAAGTLDAST 151

Query:   132 KIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAH-SVHREGYSKKDIE-KKLSP 189
             KIY++RVD+VH++ YKVLGG+ +     E+    ED  A  S    G +KK  + +K   
Sbjct:   152 KIYAVRVDAVHADVYKVLGGLGKDAPPPEE---AEDHGADGSATETGTAKKAPKPRKKHS 208

Query:   190 LSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXXXXXXV--YTGCQVLFDS 247
               T+E +   LNV   D    VDP++ +T+A FDE               Y   ++LF +
Sbjct:   209 CKTIEQNVNNLNVSSADRKCEVDPMFQKTAASFDECSTAGVFLSTLHCPDYRS-ELLFPA 267

Query:   248 QEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKD-EISPTLRTI-VNQYDEDNR 305
                    +   S     +  DL +      +  L   A+D +I P+L      ++D +  
Sbjct:   268 D------IQTLSSGEPPELPDLGWVEMTDLKAALQQCAEDRQICPSLAGFQFTKWDSEAH 321

Query:   306 RSS-----DTFSSIQKLVDQVEAVHNNEAES--DGVAFDDCGTNDFYHDDQSSIVD--EN 356
               S     D F    ++ D    V +++ E   +G   DD   ND    DQ+   D  E 
Sbjct:   322 NESVSALVDKFKKKDQVFDLDAEVEDSDCEDFPNGPLEDDFDAND--EADQTEAGDRTEL 379

Query:   357 LGGSDPTFTSYLED---PDTDDRFERVDEYLFLNLG----FSSK-QNAWAGPDHWKYRKA 408
                 +P      +D   P  D     +   L +  G    FS +  + WAGPDHW++R  
Sbjct:   380 RSWKEPCQVQSCQDEVIPLGDGDIWTLCPLLSMKPGEYSYFSPRTMSMWAGPDHWRFRPR 439

Query:   409 KGPVEGSKDDPALEGGSPVRTKKIRGRRQP-EPDIDFKKALDEKFPDLFAPPKNPKSLLI 467
                    K D A +  S  R K  +  +   + DIDF    D  F    A     K  L 
Sbjct:   440 L------KRDTASQ--SEHRKKSSKDFKIDFDDDIDF----DVHFRKTKAVTVLTKFTLE 487

Query:   468 PGN-RAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWG 526
               N RA   TTLP D  Y+ E+L++L L P    L   + +K+  E  +   +  + +  
Sbjct:   488 NQNWRA---TTLPTDFQYETENLVQLHLKPGTRLLKVAQGQKAGTEHCEEIGNYDYNNPN 544

Query:   527 NENMFDGQFDDGNDPSDVEGSDTLVSQP 554
             + + F       +  SD E SD L   P
Sbjct:   545 DTSNFCPGLQAAD--SDYEESDDLFEGP 570

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0007076 "mitotic chromosome condensation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000796 "condensin complex" evidence=IEA

UNIPROTKB|E9PHA2 NCAPH "Condensin complex subunit 2" [Homo sapiens (taxid:9606)]

 Score = 364 (133.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
 Identities = 146/499 (29%), Positives = 223/499 (44%)

Query:    73 QILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVE-TNFQKASCTLEAGV 131
             QI E +  CIKL++ENKI  KN + L+LID + EI+K   + D E TNF+ A+ TL+A  
Sbjct:    95 QITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILK---QKDTEPTNFKVAAGTLDAST 151

Query:   132 KIYSLRVDSVHSEAYKVLGGINR-AGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPL 190
             KIY++RVD+VH++ Y+VLGG+ + A    E +  V D +A  +   G +KK ++ K   L
Sbjct:   152 KIYAVRVDAVHADVYRVLGGLGKDAPSLEEVEGHVADGSATEM---GTTKKAVKPKKKHL 208

Query:   191 S-TLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXXXXXXVYTGCQVLFDSQE 249
               T+E +   LNV + D    +DP++ +T+A FDE                CQ       
Sbjct:   209 HRTIEQNINNLNVSEADRKCEIDPMFQKTAASFDECSTAGVFLSTLH----CQDYRSELL 264

Query:   250 VPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKD-EISPTLRTI-VNQYDEDNRRS 307
              P    + ++   + +  +L        +  L   A+D +I P+L      Q+D +    
Sbjct:   265 FPSDVQTLSTGEPL-ELPELGCVEMTDLKAPLQQCAEDRQICPSLAGFQFTQWDSETHNE 323

Query:   308 S-----DTFSSIQKLVDQVEAVHNNEAES--DGVAFDDCGTNDFYHDDQSSIVD--ENLG 358
             S     D F    ++ D    V  ++     DG   DD   ND    D +++ D  E   
Sbjct:   324 SVSALVDKFKKNDQVFDINAEVDESDCGDFPDGSLGDDFDAND--EPDHTAVGDHEEFRS 381

Query:   359 GSDPT-FTSYLEDPDT--DDRFERVDEYLFLNLG----FSSK-QNAWAGPDHWKYRKAKG 410
               +P    S  E+  +  D     +   L +  G    FS +  + WAGPDHW++R  + 
Sbjct:   382 WKEPCQVQSCQEEMISLGDGDIRTMCPLLSMKPGEYSYFSPRTMSMWAGPDHWRFRPRR- 440

Query:   411 PVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGN 470
                  +D P+        TKK       E DIDF    D  F    A     KS L   N
Sbjct:   441 ----KQDAPSQSENKKKSTKK-DFEIDFEDDIDF----DVYFRKTKAATILTKSTLENQN 491

Query:   471 -RAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNEN 529
              RA   TTLP D +Y  + L++L L P    L   +  +  VE +  ++ E +  + N N
Sbjct:   492 WRA---TTLPTDFNYNVDTLVQLHLKPGTRLLKMAQGHR--VETEHYEEIEDY-DYNNPN 545

Query:   530 MFDGQFDDGNDPSDVEGSD 548
                  F  G   +D +  D
Sbjct:   546 D-TSNFCPGLQAADSDDED 563

GO:0007067 "mitosis" evidence=IEA

GO:0030261 "chromosome condensation" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|Q15003 NCAPH "Condensin complex subunit 2" [Homo sapiens (taxid:9606)]

 Score = 364 (133.2 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
 Identities = 146/499 (29%), Positives = 223/499 (44%)

Query:    73 QILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVE-TNFQKASCTLEAGV 131
             QI E +  CIKL++ENKI  KN + L+LID + EI+K   + D E TNF+ A+ TL+A  
Sbjct:   106 QITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILK---QKDTEPTNFKVAAGTLDAST 162

Query:   132 KIYSLRVDSVHSEAYKVLGGINR-AGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPL 190
             KIY++RVD+VH++ Y+VLGG+ + A    E +  V D +A  +   G +KK ++ K   L
Sbjct:   163 KIYAVRVDAVHADVYRVLGGLGKDAPSLEEVEGHVADGSATEM---GTTKKAVKPKKKHL 219

Query:   191 S-TLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXXXXXXVYTGCQVLFDSQE 249
               T+E +   LNV + D    +DP++ +T+A FDE                CQ       
Sbjct:   220 HRTIEQNINNLNVSEADRKCEIDPMFQKTAASFDECSTAGVFLSTLH----CQDYRSELL 275

Query:   250 VPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKD-EISPTLRTI-VNQYDEDNRRS 307
              P    + ++   + +  +L        +  L   A+D +I P+L      Q+D +    
Sbjct:   276 FPSDVQTLSTGEPL-ELPELGCVEMTDLKAPLQQCAEDRQICPSLAGFQFTQWDSETHNE 334

Query:   308 S-----DTFSSIQKLVDQVEAVHNNEAES--DGVAFDDCGTNDFYHDDQSSIVD--ENLG 358
             S     D F    ++ D    V  ++     DG   DD   ND    D +++ D  E   
Sbjct:   335 SVSALVDKFKKNDQVFDINAEVDESDCGDFPDGSLGDDFDAND--EPDHTAVGDHEEFRS 392

Query:   359 GSDPT-FTSYLEDPDT--DDRFERVDEYLFLNLG----FSSK-QNAWAGPDHWKYRKAKG 410
               +P    S  E+  +  D     +   L +  G    FS +  + WAGPDHW++R  + 
Sbjct:   393 WKEPCQVQSCQEEMISLGDGDIRTMCPLLSMKPGEYSYFSPRTMSMWAGPDHWRFRPRR- 451

Query:   411 PVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGN 470
                  +D P+        TKK       E DIDF    D  F    A     KS L   N
Sbjct:   452 ----KQDAPSQSENKKKSTKK-DFEIDFEDDIDF----DVYFRKTKAATILTKSTLENQN 502

Query:   471 -RAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNEN 529
              RA   TTLP D +Y  + L++L L P    L   +  +  VE +  ++ E +  + N N
Sbjct:   503 WRA---TTLPTDFNYNVDTLVQLHLKPGTRLLKMAQGHR--VETEHYEEIEDY-DYNNPN 556

Query:   530 MFDGQFDDGNDPSDVEGSD 548
                  F  G   +D +  D
Sbjct:   557 D-TSNFCPGLQAADSDDED 574

GO:0051301 "cell division" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0007076 "mitotic chromosome condensation" evidence=IDA

GO:0000796 "condensin complex" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|G4MUD3 MGG_01639 "Condensin complex component cnd2" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 288 (106.4 bits), Expect = 5.0e-37, Sum P(4) = 5.0e-37
 Identities = 72/182 (39%), Positives = 105/182 (57%)

Query:    74 ILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKI 133
             IL  F   +K+A++NKINQ N+W   LID+  ++  ++E + V  NFQKASCTL+  VKI
Sbjct:   128 ILANFEEWMKMATDNKINQANSWNFALIDYFHDMSLLKEGDGV--NFQKASCTLDGCVKI 185

Query:   134 YSLRVDSVHSEAYKVLGGI--NRAGQEN--EQDTRVEDKNAHS-VHREG-YSKKDIEKKL 187
             Y+ RVDSV  E  K+L G+  +R  ++   + D   ED  A   V  +G   KK  +K  
Sbjct:   186 YTSRVDSVAEETGKLLSGLADSRDSKKKRADGDGDGEDSGAEDEVDEDGNVIKKPKKKSR 245

Query:   188 SPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXXXXXXVYTGCQVLFDS 247
             S  +TL  SF ++ +KKF+  FAVDPL+ + SA FDE            + T  +++FDS
Sbjct:   246 SAEATLAPSFSSIQLKKFELEFAVDPLFKKASADFDEGGAKGLLLNHLMIDTQGRIVFDS 305

Query:   248 QE 249
              +
Sbjct:   306 SD 307

GO:0003674 "molecular_function" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

ASPGD|ASPL0000016922 AN4265 [Emericella nidulans (taxid:162425)]

 Score = 282 (104.3 bits), Expect = 6.4e-35, Sum P(3) = 6.4e-35
 Identities = 66/179 (36%), Positives = 101/179 (56%)

Query:    74 ILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKI 133
             IL  F   +K+A++NKIN  N+W   LID+  ++  ++E + V  NFQKASCTL+  VKI
Sbjct:   113 ILANFEEWMKMATDNKINATNSWNFALIDYFHDMSLLKEGDSV--NFQKASCTLDGCVKI 170

Query:   134 YSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHR---EGYSKKDIEKKLSPL 190
             Y+ RVDSV +E  K+L G+  +  +  ++   E + A        EG SK+   K+    
Sbjct:   171 YTSRVDSVATETGKLLSGLADSRDKKAREAEAEGEGAEDDEEDGEEGTSKRSRRKRTHE- 229

Query:   191 STLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXXXXXXVYTGCQVLFDSQE 249
             +TL  SF +L +KKF+  F+VDPL+ + SA FDE            +    +++FDS +
Sbjct:   230 ATLAPSFSSLQLKKFELEFSVDPLFKKASADFDEGGAKGLLLNHLSIDGHGRIVFDSSD 288

GO:0006281 "DNA repair" evidence=IEA

GO:0007076 "mitotic chromosome condensation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000796 "condensin complex" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:2444777 Ncaph "non-SMC condensin I complex, subunit H" [Mus musculus (taxid:10090)]

 Score = 399 (145.5 bits), Expect = 1.9e-34, P = 1.9e-34
 Identities = 178/628 (28%), Positives = 266/628 (42%)

Query:     6 SPLRRQKVAIASR-----IQSPTSPFF--LGSNDDGLEXXXXXXXXXXXXXXXPVTVHYP 58
             SPL R  V  ASR     + +P +P       NDD  E                 ++H  
Sbjct:    25 SPLER--VPPASRPGKAPLGTPKTPVLEDFPQNDDEKERMQRRRSRVFDLQFSTDSIHLA 82

Query:    59 LPQHGHSDSC-LGK---DQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEEN 114
              P      S  + K    QI E +  CIKL+SENKI  KN + L+LID + EI+K   + 
Sbjct:    83 SPNRNIDVSTTISKFTNTQITEHYSTCIKLSSENKITTKNAFGLHLIDFMSEILK---QK 139

Query:   115 DVE-TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSV 173
             D E TNF+ A+ TL+A  KIY++RVD+VH++ Y+VLGG+ +      +++   D +    
Sbjct:   140 DAEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGLGKDTPPQGEESHSGDGSTLET 199

Query:   174 HREGYSKKDIE-KKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXX 232
              R   +KK  + KK     T+E +   +NV + D   AVDP++ +T+A FDE        
Sbjct:   200 ER---TKKPAKPKKKQSCKTIEQNLSNINVSEADGKCAVDPMFQKTAASFDECSTTGVFL 256

Query:   233 XXXXVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDE-ISP 291
                     CQ  + S+ +    M   S     +  DL F      +  L    +D  + P
Sbjct:   257 STLH----CQD-YRSELLFPSDMQTLSSGEPLELPDLGFVDMTDLEASLQQCVEDRPLCP 311

Query:   292 TLRTI-VNQYD-EDNRRSSDTFSSIQKLVDQVEAVHNNEAESDGVAFDDCG-TNDFYHDD 348
             +L      ++D E +  S        K  DQV  + N EAE D     D     DF  +D
Sbjct:   312 SLAGFQFTKWDSETHNESVSALVDKFKKNDQVFDI-NAEAEDDEEDVPDGPLVEDFVDND 370

Query:   349 QSSIVDENLGGSDPTFTSYLEDPDTDDRFERV----DEYL-----FLNL--G----FSSK 393
             +    D +  G    F S+ E        E V    D  +     FL++  G    FS +
Sbjct:   371 EP---DLSAAGDHEEFRSWKELCQVQSNQEEVISLEDRDIQVMCSFLSMKPGEYSYFSPR 427

Query:   394 -QNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKF 452
                 WAGPDHW++R            P  +  S    KK   ++  E + D     D  F
Sbjct:   428 TMKMWAGPDHWRFRPR----------PKQDATSCTEHKKKSAKKDFEINFDDDIDFDAYF 477

Query:   453 PDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVE 512
                 A     KS L   N+    TTLP D HY+ ++LI+L L P    L   + +K+  E
Sbjct:   478 QKTKAATILTKSTL--ENQNWKATTLPTDFHYETDNLIQLHLKPGKRSLKMDQDQKAKTE 535

Query:   513 R-QQTDDHEGFPSWGNENMFDG-QFDDGNDPSDVEGSDTLVSQPRQVQKVEVEYDKTSKQ 570
               ++ +D++        N   G Q  D    SD E +D L + P  V  +++E D  + Q
Sbjct:   536 HYEEIEDYDYNNPNDTSNYCPGLQAAD----SDYEEADDLFADP--VGTLDLESDPKTTQ 589

Query:   571 VDVQTLKETIWVHIQESPQM-AAQDPEK 597
              +     E   V I    ++    +P+K
Sbjct:   590 ENGHISPENQGVDITTYQELNLVAEPQK 617

GO:0000796 "condensin complex" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007076 "mitotic chromosome condensation" evidence=ISO

GO:0030261 "chromosome condensation" evidence=IEA

GO:0051301 "cell division" evidence=IEA

SGD|S000000193 BRN1 "Subunit of the condensin complex" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 182 (69.1 bits), Expect = 1.7e-31, Sum P(4) = 1.7e-31
 Identities = 43/120 (35%), Positives = 71/120 (59%)

Query:    78 FHNCIKLASENKINQKNTWELNLIDHLCEIIKVEE-ENDVETNFQKASCTLEAGVKIYSL 136
             F   IK+A++NKIN +N+W   LID+  ++  +++ EN++  NFQKAS TL+  +KIYS 
Sbjct:    31 FEEWIKMATDNKINSRNSWNFALIDYFYDLDVLKDGENNI--NFQKASATLDGCIKIYSS 88

Query:   137 RVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESS 196
             RVDSV +E  K+L G+  A ++    +  +D N  +    G    +   ++ PL+ +  S
Sbjct:    89 RVDSVTTETGKLLSGL--AQRKTNGASNGDDSNGGNGEGLGGDSDEANIEIDPLTGMPIS 146

GO:0007076 "mitotic chromosome condensation" evidence=IGI;IMP

GO:0051301 "cell division" evidence=IEA

GO:0000799 "nuclear condensin complex" evidence=ISS;TAS;IPI

GO:0000070 "mitotic sister chromatid segregation" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0032116 "SMC loading complex" evidence=IDA

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0070058 "tRNA gene clustering" evidence=IMP

GO:0007067 "mitosis" evidence=IEA

GO:0030261 "chromosome condensation" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

UNIPROTKB|B4E189 NCAPH "Condensin complex subunit 2" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
 Identities = 129/468 (27%), Positives = 201/468 (42%)

Query:   104 LCEIIKVEEENDVE-TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINR-AGQENEQ 161
             + EI+K   + D E TNF+ A+ TL+A  KIY++RVD+VH++ Y+VLGG+ + A    E 
Sbjct:     1 MSEILK---QKDTEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGLGKDAPSLEEV 57

Query:   162 DTRVEDKNAHSVHREGYSKKDIEKKLSPLS-TLESSFEALNVKKFDAAFAVDPLYHQTSA 220
             +  V D +A  +   G +KK ++ K   L  T+E +   LNV + D    +DP++ +T+A
Sbjct:    58 EGHVADGSATEM---GTTKKAVKPKKKHLHRTIEQNINNLNVSEADRKCEIDPMFQKTAA 114

Query:   221 QFDEXXXXXXXXXXXXVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMV 280
              FDE                CQ        P    + ++   + +  +L        +  
Sbjct:   115 SFDECSTAGVFLSTLH----CQDYRSELLFPSDVQTLSTGEPL-ELPELGCVEMTDLKAP 169

Query:   281 LNMQAKD-EISPTLRTI-VNQYDEDNRRSS-----DTFSSIQKLVDQVEAVHNNEAES-- 331
             L   A+D +I P+L      Q+D +    S     D F    ++ D    V  ++     
Sbjct:   170 LQQCAEDRQICPSLAGFQFTQWDSETHNESVSALVDKFKKNDQVFDINAEVDESDCGDFP 229

Query:   332 DGVAFDDCGTNDFYHDDQSSIVD--ENLGGSDPT-FTSYLEDPDT--DDRFERVDEYLFL 386
             DG   DD   ND    D +++ D  E     +P    S  E+  +  D     +   L +
Sbjct:   230 DGSLGDDFDAND--EPDHTAVGDHEEFRSWKEPCQVQSCQEEMISLGDGDIRTMCPLLSM 287

Query:   387 NLG----FSSK-QNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPD 441
               G    FS +  + WAGPDHW++R  +      +D P+        TKK       E D
Sbjct:   288 KPGEYSYFSPRTMSMWAGPDHWRFRPRR-----KQDAPSQSENKKKSTKK-DFEIDFEDD 341

Query:   442 IDFKKALDEKFPDLFAPPKNPKSLLIPGN-RAPSNTTLPEDCHYQPEDLIKLFLLPNVMC 500
             IDF    D  F    A     KS L   N RA   TTLP D +Y  + L++L L P    
Sbjct:   342 IDF----DVYFRKTKAATILTKSTLENQNWRA---TTLPTDFNYNVDTLVQLHLKPGTRL 394

Query:   501 LDKRRRRKSSVERQQTDDHEGFPSWGNENMFDGQFDDGNDPSDVEGSD 548
             L   +  +  VE +  ++ E +  + N N     F  G   +D +  D
Sbjct:   395 LKMAQGHR--VETEHYEEIEDY-DYNNPND-TSNFCPGLQAADSDDED 438

GO:0005737 "cytoplasm" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

UNIPROTKB|C9J470 NCAPH "Condensin complex subunit 2" [Homo sapiens (taxid:9606)]

 Score = 364 (133.2 bits), Expect = 9.0e-31, P = 9.0e-31
 Identities = 146/499 (29%), Positives = 223/499 (44%)

Query:    73 QILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVE-TNFQKASCTLEAGV 131
             QI E +  CIKL++ENKI  KN + L+LID + EI+K   + D E TNF+ A+ TL+A  
Sbjct:    95 QITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILK---QKDTEPTNFKVAAGTLDAST 151

Query:   132 KIYSLRVDSVHSEAYKVLGGINR-AGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPL 190
             KIY++RVD+VH++ Y+VLGG+ + A    E +  V D +A  +   G +KK ++ K   L
Sbjct:   152 KIYAVRVDAVHADVYRVLGGLGKDAPSLEEVEGHVADGSATEM---GTTKKAVKPKKKHL 208

Query:   191 S-TLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEXXXXXXXXXXXXVYTGCQVLFDSQE 249
               T+E +   LNV + D    +DP++ +T+A FDE                CQ       
Sbjct:   209 HRTIEQNINNLNVSEADRKCEIDPMFQKTAASFDECSTAGVFLSTLH----CQDYRSELL 264

Query:   250 VPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKD-EISPTLRTI-VNQYDEDNRRS 307
              P    + ++   + +  +L        +  L   A+D +I P+L      Q+D +    
Sbjct:   265 FPSDVQTLSTGEPL-ELPELGCVEMTDLKAPLQQCAEDRQICPSLAGFQFTQWDSETHNE 323

Query:   308 S-----DTFSSIQKLVDQVEAVHNNEAES--DGVAFDDCGTNDFYHDDQSSIVD--ENLG 358
             S     D F    ++ D    V  ++     DG   DD   ND    D +++ D  E   
Sbjct:   324 SVSALVDKFKKNDQVFDINAEVDESDCGDFPDGSLGDDFDAND--EPDHTAVGDHEEFRS 381

Query:   359 GSDPT-FTSYLEDPDT--DDRFERVDEYLFLNLG----FSSK-QNAWAGPDHWKYRKAKG 410
               +P    S  E+  +  D     +   L +  G    FS +  + WAGPDHW++R  + 
Sbjct:   382 WKEPCQVQSCQEEMISLGDGDIRTMCPLLSMKPGEYSYFSPRTMSMWAGPDHWRFRPRR- 440

Query:   411 PVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGN 470
                  +D P+        TKK       E DIDF    D  F    A     KS L   N
Sbjct:   441 ----KQDAPSQSENKKKSTKK-DFEIDFEDDIDF----DVYFRKTKAATILTKSTLENQN 491

Query:   471 -RAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNEN 529
              RA   TTLP D +Y  + L++L L P    L   +  +  VE +  ++ E +  + N N
Sbjct:   492 WRA---TTLPTDFNYNVDTLVQLHLKPGTRLLKMAQGHR--VETEHYEEIEDY-DYNNPN 545

Query:   530 MFDGQFDDGNDPSDVEGSD 548
                  F  G   +D +  D
Sbjct:   546 D-TSNFCPGLQAADSDDED 563

GO:0005737 "cytoplasm" evidence=IDA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q564K3	CND2_ARATH	No assigned EC number	0.6194	0.9862	0.9627	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	655
pfam05786	719	pfam05786, Cnd2, Condensin complex subunit 2	1e-149
COG5229	662	COG5229, LOC7, Chromosome condensation complex Con	3e-54

>gnl|CDD|218747 pfam05786, Cnd2, Condensin complex subunit 2

 Score =  449 bits (1157), Expect = e-149
 Identities = 245/741 (33%), Positives = 337/741 (45%), Gaps = 115/741 (15%)

Query: 6   SPLRRQKVAIASRIQSPTSPFFLGSNDDGLERAKARAARAAAI-----RRKPVTVHYPLP 60
           +PLRR       R+ SP +P    SNDD  ER + R +R  ++          T      
Sbjct: 3   TPLRRSPGGSTQRLSSPMTPL--PSNDDEAERRQRRPSRRRSVLDLQTSADSSTPR-ASG 59

Query: 61  QHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNF 120
                   L   QILE F  CIKLA++NKIN KN W L LID+  +I+ ++E     TNF
Sbjct: 60  GRRAVTPKLSSTQILENFEECIKLATDNKINTKNAWNLALIDYFHDILLLKEGE--LTNF 117

Query: 121 QKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYS- 179
           QKASCTL+A VKIY+ RVDSVH+E  K+LGG+  +  +   +T  E  +      EG   
Sbjct: 118 QKASCTLDASVKIYASRVDSVHTETGKLLGGLADSDNKEAPETGREGDDGEDDDEEGSDG 177

Query: 180 -----KKDIEKKL--SPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLL 232
                KK  +KK    P STLE +FEALNVKK D  FAVDPL+ +TSA FDEGGAKGLLL
Sbjct: 178 EEDGAKKKAKKKRQRKPESTLEKNFEALNVKKLDLEFAVDPLFKKTSADFDEGGAKGLLL 237

Query: 233 NNLGVYTGCQVLFDSQEVPGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPT 292
           N+L + +  +++FDS E P +  S   +      IDL+         +L+   K  I P+
Sbjct: 238 NHLSIDSEGRLVFDSSEDPEELSSEDDEFPDDGEIDLTPLK---FFPLLDRLEKRPICPS 294

Query: 293 LRTIVNQYDEDNRRSSDTFS-------SIQKLVDQVEAVHNNEAESDGVAFDDCGTNDFY 345
           L     Q  + +    D F        +  +  D  +   +N+ + D V FD     +  
Sbjct: 295 LAGF--QLTDPSGSLDDPFLKAPEDTENEDESDDNADDFDDNDKKGD-VGFDINAEVED- 350

Query: 346 HDDQSSIVDENLGGSDPTFTSYLE-----------DPDTDDRFERVDEYLFLNLGFSS-- 392
            D      D   GG    F +  E             +  D  E VD  + L+    S  
Sbjct: 351 -DPDEDAEDGGDGGDAEEFEAEKEPMLKVCRVDRQVTEIIDGDEPVDYCISLSYNELSYF 409

Query: 393 ---KQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALD 449
               Q  WAGP+HWK+R+ K P   +  D      S    +K R +   E  IDF   L+
Sbjct: 410 DPRLQKNWAGPEHWKFRRTKRPEPRAAADTK----SAAEKQKKRAKEPFE--IDFGAPLE 463

Query: 450 EKFPD-LFAPPKNPKSLLIPGNRAPSN--TTLPEDCHYQPEDLIKLFLLPNVMCLDKRRR 506
           E   + +F PPK   +L     +   +  T LP D H++P++LIKLFL P V      ++
Sbjct: 464 EIDFEVIFQPPKANSTLSKSKLQKKWDTRTLLPTDFHFEPDNLIKLFLKPGVRLGKFDQK 523

Query: 507 RKSSVE-RQQTDDHEGFPSWGNENM-------------------FDGQFDD----GNDPS 542
           +++S E     D++     + N N                     DG FDD     +DPS
Sbjct: 524 QRASTEHDGDMDEYF----YNNPNFADDDPNFCPVGQGADGDDDDDGPFDDAAEMLSDPS 579

Query: 543 D----------------VEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQE 586
           D                      L+  PR+V K+ V Y KT+K+VDV+ LK+ +W  IQE
Sbjct: 580 DGEPGASASDAGGADILTYIETELIGAPRKVNKIYVAYAKTAKKVDVKKLKQNMWSLIQE 639

Query: 587 SPQMAAQDPEKTV------------SFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLA 634
             +  A                   SF  L+ S P     A   +DIS  L FICLLHLA
Sbjct: 640 RLESTADFESIPPEEEEESESEEEKSFTQLMRSLPDRL-PAEMAQDISTSLAFICLLHLA 698

Query: 635 NEHSLSIQGCANLDDLSIILP 655
           NE  L + G  +L+D +I   
Sbjct: 699 NEKGLRLIGQDDLEDFTISQD 719

This family consists of several Barren protein homologues from several eukaryotic organisms. In Drosophila Barren (barr) is required for sister-chromatid segregation in mitosis. barr encodes a novel protein that is present in proliferating cells and has homologues in yeast and human. Mitotic defects in barr embryos become apparent during cycle 16, resulting in a loss of PNS and CNS neurons. Centromeres move apart at the metaphase-anaphase transition and Cyclin B is degraded, but sister chromatids remain connected, resulting in chromatin bridging. Barren protein localises to chromatin throughout mitosis. Colocalisation and biochemical experiments indicate that Barren associates with Topoisomerase II throughout mitosis and alters the activity of Topoisomerase II. It has been suggested that this association is required for proper chromosomal segregation by facilitating the decatenation of chromatids at anaphase. This family forms one of the three non-structural maintenance of chromosomes (SMC) subunits of the mitotic condensation complex along with Cnd1 and Cnd3. Length = 719

>gnl|CDD|227554 COG5229, LOC7, Chromosome condensation complex Condensin, subunit H [Chromatin structure and dynamics / Cell division and chromosome partitioning]

 Score =  196 bits (499), Expect = 3e-54
 Identities = 164/662 (24%), Positives = 252/662 (38%), Gaps = 105/662 (15%)

Query: 78  FHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLR 137
           F   IK A++NKIN KNTW   LID+  +I ++ +   +  NFQKASCTL+   KIYS R
Sbjct: 6   FEEWIKAATDNKINSKNTWNFALIDYFTDIDELRDGEGI--NFQKASCTLDGCAKIYSSR 63

Query: 138 VDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSF 197
           VDSV +E  K+L G+         +    D       R   + ++  KK     T    F
Sbjct: 64  VDSVSTETGKLLSGLANDSNGGNGEGLGGDIEIDDPDRN--NTEERRKKQRVGKTTLVKF 121

Query: 198 EALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQEVP-----G 252
           E + +KK      +DPL+ +    FDEGGAK LLLN L +    ++ FDS  +      G
Sbjct: 122 EKITIKKNICELNIDPLFKKRCVDFDEGGAKSLLLNTLNIDNTKRLYFDSSPIKDTENVG 181

Query: 253 KGMSCASQHS-----------MSDTIDLSFASEY---IEQMVLNMQAKDEI--------- 289
           +G     +             M D+  L  +S      + ++     +DEI         
Sbjct: 182 QGKLQRKEEELIERDSLVDDLMIDSQSLGISSNDSTVNDSVISAPSMEDEILGLGMDFIK 241

Query: 290 ------------SPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVE--AVHNNEAESDGVA 335
                              ++         S + S  +++ D VE  AV N+   SD   
Sbjct: 242 VLRMSVCRIEGTVIVDDFKMSMDFPAGLLISPSISEDKEIRDIVEEPAVDNDNEVSDSDG 301

Query: 336 FD-DCGTNDFYHDDQSSIVDENLGGSDPTFTSYLEDPDTDDRFERVDEYLFLNLGFSSKQ 394
           FD       F  D+    ++E L  S     S        D ++  D   F N       
Sbjct: 302 FDMGEHAGLFSGDNFE--LNEILPPSSNQNPSTTGSIFEKDVYKYFDFSYFKN------- 352

Query: 395 NAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRG--------RRQPEPDIDFKK 446
             WAGP+HWK +  K  V    D       +    K            +++    IDF +
Sbjct: 353 --WAGPEHWKVQAKKKRVNKESDLLEETRTTITTDKTDDKSMDTSGKQKQKEASFIDFTE 410

Query: 447 ALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDK--- 503
            +D +   +  P            +  S   LP+D   + E L +LF+ P +        
Sbjct: 411 TVDYEG--MLEPGNTLFDPPFIVEKRESRHLLPDDFRLEVERLYRLFVKPKMSLFSHSSG 468

Query: 504 --RRRRKSSVERQQTDDH---------------EGFPSWGNENMFDGQFDDGNDPSDVEG 546
              ++ +++ E +   DH               E  PS G   + +   DD +     + 
Sbjct: 469 LFYKKDQAAAEEENDIDHIPASCFIEDPEDEFVEDIPSQGVGALDNPFEDDMDGVDFSQK 528

Query: 547 -SDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIW---------------VHIQESPQM 590
             D   +  +   + ++ Y KT K+VDV+ LK+++W                    S   
Sbjct: 529 FPDNEEASVKLDLQDKIPYRKTPKKVDVRKLKDSVWDSVKGGSTSHDSRKNREQSSSETH 588

Query: 591 AAQDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDL 650
                 K + F  +    P        +KDIS   CFICLLHLANEH+L +    N  D+
Sbjct: 589 TELSSTKELKFSDIFEGIPK-VYNGEELKDISTSFCFICLLHLANEHNLQLTAVENDIDV 647

Query: 651 SI 652
            +
Sbjct: 648 QM 649

Length = 662

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	655
PF05786	725	Cnd2: Condensin complex subunit 2; InterPro: IPR02	100.0
KOG2328	702	consensus Chromosome condensation complex Condensi	100.0
COG5229	662	LOC7 Chromosome condensation complex Condensin, su	100.0

>PF05786 Cnd2: Condensin complex subunit 2; InterPro: IPR022816 This entry represents eukaryotic condensin complex subunit 2 proteins

Probab=100.00  E-value=2.5e-128  Score=1122.12  Aligned_cols=620  Identities=37%  Similarity=0.586  Sum_probs=412.1

Q ss_pred             HhhhcccCCCCCCCCCCCCccHHHHHHHHHHHHhh-hccCccccC-CC-----CCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 042218           13 VAIASRIQSPTSPFFLGSNDDGLERAKARAARAAA-IRRKPVTVH-YP-----LPQHGHSDSCLGKDQILELFHNCIKLA   85 (655)
Q Consensus        13 ~~~~~~~~~p~~~~~~~~NdDe~ER~~rR~sr~~~-~~r~s~~~~-~~-----~~~~~~~~~~~~~~~i~~~~~~~ikl~   85 (655)
                      .++++++++|.+|  ++.|||++||++||.+|... +++.....+ .+     +.......|.++..||+++|++|||||
T Consensus        10 ~~~~~~~~~~~~~--~~~ndd~~er~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ikl~   87 (725)
T PF05786_consen   10 SSSKSRLNSPVSP--LPSNDDEAERRQRRASRRSSVLDRQSSTSSSTPSASNQSSSGSASSPMLNKEQILENFEECIKLA   87 (725)
T ss_pred             CCCCCCCCCCCCC--CCCCccHHHHHhhccccchhhhhcccccCCCccccccccccccccCcccChHHHHHHHHHHHHHH
Confidence            4567788888877  99999999999995444332 222211111 00     112234568899999999999999999


Q ss_pred             hhcccccccccCcchhhHHHHHHhhhccccccchhhhhhcccccceeeeeeechhHHHHHHHHHhhhhhcCCC---Cccc
Q 042218           86 SENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQE---NEQD  162 (655)
Q Consensus        86 teNKIn~kNaw~l~LID~~~~~~~~~~~~~~~~NFq~As~tLda~~KIYs~RVDsv~~et~k~l~gl~r~~~~---~~~~  162 (655)
                      ++||||+||||+|+|||||++|+..++  .+++|||+||||||||||||||||||||+||||||+||++..+.   +.+.
T Consensus        88 ~~NKIn~~Naw~~~lID~~~~~~~~~~--~~~~nFq~As~tLd~~~KIy~~RVDsv~~~t~k~l~~l~~~~~~~~~~~~~  165 (725)
T PF05786_consen   88 TENKINAKNAWNLALIDYFHDLIDKKD--GDMINFQKASCTLDASVKIYSSRVDSVHTETYKLLSGLARSDQKEAAEEGD  165 (725)
T ss_pred             hhCCcccccccchhHHHHHHHHHhccc--cccchHHHhhhheeeeeeEEeeeehHHHHHHHHHHHhcccccccccccccc
Confidence            999999999999999999999987765  36899999999999999999999999999999999999863211   1111


Q ss_pred             ccc--ccccccc---cccccCCccccccccCCccchhcccccccccccccccccCccccccccccccCchhhhhhhcCcC
Q 042218          163 TRV--EDKNAHS---VHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGV  237 (655)
Q Consensus       163 ~~~--e~~~~~~---~~~~~~~kk~~~r~~~~~~Tle~~~~~i~~~~~d~~~~vDPlF~k~~a~fDeg~a~glLln~L~~  237 (655)
                      ++.  +.++.++   .+....+|+++|++++..+||+++|++|++|++|++|.|||||+|++|.||||||+|||||||+|
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~TL~~~~~~i~~k~~d~e~~vDPLFkK~sa~FDEggAkgLLLN~L~i  245 (725)
T PF05786_consen  166 EGEDGEDDDGEGQDDEEDGSKKKKKKKRNRRSESTLEKNFENINVKKFDLEFSVDPLFKKTSADFDEGGAKGLLLNNLSI  245 (725)
T ss_pred             ccCCCCCccccccccccccccccccccccCCccchhhcCHHHhCCccccccccCCHHHhhhhcccCCcchHHHHHhhccc
Confidence            111  0111111   11111222233445788999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEeecCCCCCCCC--CccccCCCCCCCcchhhhHHHHHHHHhcccccCCCCcchhhhhhhcCCCCcCCCCcccchh
Q 042218          238 YTGCQVLFDSQEVPGKG--MSCASQHSMSDTIDLSFASEYIEQMVLNMQAKDEISPTLRTIVNQYDEDNRRSSDTFSSIQ  315 (655)
Q Consensus       238 ~~~~~v~fDs~~~~~~~--~~~~~~~~~~~~idls~~~~~~~~~l~~~~~~~~IcPsl~~f~~~~d~~~~~~~~~~~~~~  315 (655)
                      +++|+|||||++.+.+.  .....+......|+++.|+   ..+++.++....|||||.+|.  +++++......+....
T Consensus       246 d~~~rlvFDs~~~~~~~~~~~~~~~~~~~~~id~~~l~---~~~~~~~~~~~~IcPsl~~f~--~~d~~~~~~~~~~~~~  320 (725)
T PF05786_consen  246 DSGCRLVFDSSDVPEESEEETEEEEEEDEEEIDLSSLK---FFPLLSSLEDLEICPSLSGFR--LDDPNKSKDDSFLKAN  320 (725)
T ss_pred             CCCceEEecCCccccccccccccccCCccccccHHHhh---hcccccccccCccCcchhCcc--ccCCCCCcCcchhccc
Confidence            99999999999998753  2233345566789999886   334556788899999999997  6665554443221111


Q ss_pred             hhhhhhhhhcCC--CccC----CCCCCCCCCCCCC--CC-------CCCcccccccCCCCCCCCCCCCCCCCCchhh---
Q 042218          316 KLVDQVEAVHNN--EAES----DGVAFDDCGTNDF--YH-------DDQSSIVDENLGGSDPTFTSYLEDPDTDDRF---  377 (655)
Q Consensus       316 ~~~~~~d~~~~~--~~~d----d~~~~~~~~~~df--d~-------d~~~~~~~~~~~~~d~~~~~~~e~~~~~~~~---  377 (655)
                      ....+.+....+  ++.+    .+..|+...+.++  +.       .+.....+...++.............+.+..   
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~fD~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (725)
T PF05786_consen  321 EDWEDDDESDDNDDDFDDNDNDNDMNFDINADVEDDDDPDNDDDGDGGDADAFEAEDEPVEENERNDRDNTPFDDDDRPV  400 (725)
T ss_pred             cccccccccccccccccccccccccCCCCCcccccccccccccCCCCCcccccccchhhhhccccccccccccCcccccc
Confidence            110110000000  0000    0001111111000  00       0000000000000000000000000011111   


Q ss_pred             --------hhhhHHhhhccCCCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcccCCCCCC
Q 042218          378 --------ERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALD  449 (655)
Q Consensus       378 --------~~~~~y~~~~~~~s~~~~~WAGPeHWK~r~~kk~~~~~~~~~~~~~~~~~~~kk~k~kkK~~~~IDF~~~~~  449 (655)
                              ..++.||+..+     .++||||+|||||+.|+.      .....+.......++|||+|.+|.|||+.+.+
T Consensus       401 d~~~~L~~~dl~SYFd~~~-----~knWAGPeHWK~rk~Kk~------~~~~~~~~~~~~~k~KKk~K~~f~IDF~~~~d  469 (725)
T PF05786_consen  401 DMSSSLEYPDLYSYFDEAL-----KKNWAGPEHWKFRKIKKS------KPSKKGDKKPAKPKKKKKKKEPFEIDFFSPDD  469 (725)
T ss_pred             hhccccCCcccccccChHH-----HhhccCHHHhCcccccCC------CccccccccccccccccccccccceecCCCcc
Confidence                    13445655433     479999999999998851      11111111222233445557899999999876


Q ss_pred             -CCCCCCCCCCCCCCcccCCCC--CCCCCCCCCCCCCCChhhhHhhhcCCCccchhhhhc-cccccc--ccccCCCCCCC
Q 042218          450 -EKFPDLFAPPKNPKSLLIPGN--RAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRR-RKSSVE--RQQTDDHEGFP  523 (655)
Q Consensus       450 -~~~~~lF~~~~~~~s~~l~~~--~~~~~~~LP~D~hy~~~~L~~LflkP~~~~~~~~~~-~~~~~~--~~~~~dy~~~~  523 (655)
                       ...+.+|++++.++++.++..  +...+++||+|+||++++|++|||||+++|.+...+ ......  ....|+|+  +
T Consensus       470 ~~~~e~lF~~~k~~stl~k~~~~~~~~~~~LLPdD~Hf~s~~L~rLFLKP~~~i~~~~~~~~~~~~~~~~~De~~~a--n  547 (725)
T PF05786_consen  470 EVLEEDLFAPPKSNSTLSKPKKQKKSDSRNLLPDDFHFDSKQLVRLFLKPKIKISRFGSRRDSSSESDGDADEYFWA--N  547 (725)
T ss_pred             ccchhhccCCCCcchhhcchhhhccccccCcCCcccCcCHHHHHHHhccCcceecccccccccccCCcccccccccc--c
Confidence             345569999998777777643  334567799999999999999999999988752222 111111  12233333  3


Q ss_pred             CC---CCCCCCCCC------------CCCCCC-CCC-------------------CCCCcccccCCcccccccccccccc
Q 042218          524 SW---GNENMFDGQ------------FDDGND-PSD-------------------VEGSDTLVSQPRQVQKVEVEYDKTS  568 (655)
Q Consensus       524 ~~---d~~~f~~~d------------~ddgd~-~~~-------------------~e~~~~Lv~~prkV~ki~V~YAk~A  568 (655)
                      ++   ++.++|+..            |.+..+ .++                   ...+++||++||||+||+|+|||+|
T Consensus       548 ~~~~~D~~~~~~~~~~~~~dddd~~~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~prkv~ki~V~YAr~A  627 (725)
T PF05786_consen  548 PNFNDDDDNFCPNGQGADDDDDDDDGFDDADDAFSDFNDGEDGQDANDNEGNDGTTEGGDNLVAAPRKVRKIYVNYARVA  627 (725)
T ss_pred             ccccccccccCcccccccCcCccccccCCcccccCCcccccccccccccccccccccchhhhhcccccccccCCCccccc
Confidence            33   223333321            110000 000                   1124789999999999999999999


Q ss_pred             ccccHHHHHHHHHHHhhcCCCCcc------------CCCcccccHHHHHhhCCCCCCchhhhcCcChHHHHHHHHhhccc
Q 042218          569 KQVDVQTLKETIWVHIQESPQMAA------------QDPEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANE  636 (655)
Q Consensus       569 KkVDVK~LK~n~W~~L~~~~~~~~------------~~e~~~~~F~~v~~~Lp~~~y~~~~~~dlS~s~cFICLLHLANE  636 (655)
                      ||||||+||++||++|+.......            ..+.+.++|++||+.||. +|+++++++||||||||||||||||
T Consensus       628 KkVDVk~LK~~lW~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~v~~~L~~-~~~~~~~~~lS~~~~FiclLHLANE  706 (725)
T PF05786_consen  628 KKVDVKRLKENLWKLLTKEVEESKPEESSQEEESEESEEEGEKSFSEVVKNLPS-MYPKEMAKDLSTSFCFICLLHLANE  706 (725)
T ss_pred             cccCHHHHHHHHHHhhcccccccccccccccCCcccCCCCccccHHHHHHHHHh-hcchhhhccccHHHHHHHHHHhccc
Confidence            999999999999999997654311            122467899999999999 9999999999999999999999999


Q ss_pred             CCceeccCCCCCCceeecC
Q 042218          637 HSLSIQGCANLDDLSIILP  655 (655)
Q Consensus       637 kgL~i~~~~dl~Dl~I~~~  655 (655)
                      |||+|+++++|+||.|++.
T Consensus       707 ~~L~l~~~~~l~Dl~I~~~  725 (725)
T PF05786_consen  707 KGLKLESQEDLDDLTIRKD  725 (725)
T ss_pred             cceEeecCCCchheeEecC
Confidence            9999999999999999974

Included in this group are several Barren protein homologues from several eukaryotic organisms. In Drosophila Barren (barr) is required for sister-chromatid segregation in mitosis. barr encodes a novel protein that is present in proliferating cells and has homologues in yeast and human. Mitotic defects in barr embryos become apparent during cycle 16, resulting in a loss of PNS and CNS neurons. Centromeres move apart at the metaphase-anaphase transition and Cyclin B is degraded, but sister chromatids remain connected, resulting in chromatin bridging. Barren protein localises to chromatin throughout mitosis. Colocalisation and biochemical experiments indicate that Barren associates with Topoisomerase II throughout mitosis and alters the activity of Topoisomerase II. It has been suggested that this association is required for proper chromosomal segregation by facilitating the decatenation of chromatids at anaphase [].

>KOG2328 consensus Chromosome condensation complex Condensin, subunit H [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.1e-128  Score=1049.94  Aligned_cols=607  Identities=37%  Similarity=0.514  Sum_probs=406.9

Q ss_pred             hhc--ccCCCCCCCCCCCCccHHHHHHHHHHHHhhhccCccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhhccccc
Q 042218           15 IAS--RIQSPTSPFFLGSNDDGLERAKARAARAAAIRRKPVTVHYPLPQHGHSDSCLGKDQILELFHNCIKLASENKINQ   92 (655)
Q Consensus        15 ~~~--~~~~p~~~~~~~~NdDe~ER~~rR~sr~~~~~r~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ikl~teNKIn~   92 (655)
                      |++  ++|.+..++++|+||||+||+||||++    ||.++..          .+-+..+||+++|++||||||+||||+
T Consensus        12 ~sa~~~~~~~~~~~~~~~Ndd~~er~q~r~a~----r~~~~~~----------~s~~~s~~i~e~f~~cIKLateNKInt   77 (702)
T KOG2328|consen   12 RSAPGSIQEGVSRMLTPFNDDEAERLQARRAP----RLQQHHR----------SSTLESIQINENFENCIKLATENKINT   77 (702)
T ss_pred             ccccccCCCcccccccCcCchHHHHHHhhhch----hhhhccC----------CCcchhhhHHHHHHHHHHHhhcCcccc
Confidence            444  455666677789999999999999773    2222221          122455999999999999999999999


Q ss_pred             ccccCcchhhHHHHHHhhhccccccchhhhhhcccccceeeeeeechhHHHHHHHHHhhhhhcCCCCccccccccccccc
Q 042218           93 KNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHS  172 (655)
Q Consensus        93 kNaw~l~LID~~~~~~~~~~~~~~~~NFq~As~tLda~~KIYs~RVDsv~~et~k~l~gl~r~~~~~~~~~~~e~~~~~~  172 (655)
                      ||||+|+|||||++|++++++  ++||||||||||||||||||+||||||+|||||||||++.+......++.+|.+.++
T Consensus        78 kNtWnl~LID~f~~i~~~kd~--e~iNFqkAs~TLdacvKIYs~RVDSV~tea~rlL~GL~~~gd~~~~~ed~~G~~~d~  155 (702)
T KOG2328|consen   78 KNTWNLALIDHFANILKLKDG--ENINFQKASCTLDACVKIYSSRVDSVHTEAMRLLGGLGANGDDIGAAEDDEGPDGDQ  155 (702)
T ss_pred             ccchhHHHHHHHHHHHHhhcc--CCcchhhhccccccceeeeeeehhHHHHHHHHHhhcccccccccccccccccccccc
Confidence            999999999999999999886  469999999999999999999999999999999999997654333223333333222


Q ss_pred             ccccc--CCccc-cccccCCccchhcccccccccccccccccCccccccccccccCchhhhhhhcCcCCCCceEeecCCC
Q 042218          173 VHREG--YSKKD-IEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLNNLGVYTGCQVLFDSQE  249 (655)
Q Consensus       173 ~~~~~--~~kk~-~~r~~~~~~Tle~~~~~i~~~~~d~~~~vDPlF~k~~a~fDeg~a~glLln~L~~~~~~~v~fDs~~  249 (655)
                      +.++.  ..||+ ++|+.+..+|++++|++|++|++|++|.+||||+|++++||||||+|||||||.++.+|+|+|||+.
T Consensus       156 a~~E~~~~~~k~~k~kkq~~~~T~~~~f~~l~~kk~D~~~~iDPlf~K~~adfdE~gAkglLln~L~vd~~~~~lfdS~~  235 (702)
T KOG2328|consen  156 ATGENDATNKKAEKPKKQRKLKTTVTKFNELNVKKLDTALLIDPLFKKTCADFDEGGAKGLLLNNLCVDDSERLLFDSSN  235 (702)
T ss_pred             ccccchhhhhcccchhhhcccchhhhhhhhhhhhhhhhhhccChhhhhhcCCccccchhhhhhhcccccCceeEEecccc
Confidence            22232  33333 4466678899999999999999999999999999999999999999999999999999999999985


Q ss_pred             C-CCCCCccccCCCCCCCcchhhhHHHHHHHHhccccc-CCCCcchhhh-------hhhcCCCCcCCCCcccchhhhhhh
Q 042218          250 V-PGKGMSCASQHSMSDTIDLSFASEYIEQMVLNMQAK-DEISPTLRTI-------VNQYDEDNRRSSDTFSSIQKLVDQ  320 (655)
Q Consensus       250 ~-~~~~~~~~~~~~~~~~idls~~~~~~~~~l~~~~~~-~~IcPsl~~f-------~~~~d~~~~~~~~~~~~~~~~~~~  320 (655)
                      . ..+...............++.+...    ...|.++ ..||||+...       ..+|+++++.++..........++
T Consensus       236 i~~sen~~e~~~vh~l~~~e~s~~~~~----~~~~~~d~~~~~Ps~e~~~~~l~~~~~~~da~n~~s~~~~~~~~~~~~d  311 (702)
T KOG2328|consen  236 IKDSENKTEETQVHTLLNAEMSLGIAK----SLMCVNDMVKICPSLESNLLPLHTIKIQTDAENPISGTSKVDDVVQKED  311 (702)
T ss_pred             ccccccCccccccccccchhhhccccc----chhhhHHHHhhchhhhhcCCcccceeeeecccCCCccchhhhhhhhhcc
Confidence            2 1111000000000001111111100    0112222 2467776643       367899999888765555444455


Q ss_pred             hhhhcCCCccC--CCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCC----------CCCCch----hhhhhhHHh
Q 042218          321 VEAVHNNEAES--DGVAFDDCGTNDFYHDDQSSIVDENLGGSDPTFTSYLE----------DPDTDD----RFERVDEYL  384 (655)
Q Consensus       321 ~d~~~~~~~~d--d~~~~~~~~~~dfd~d~~~~~~~~~~~~~d~~~~~~~e----------~~~~~~----~~~~~~~y~  384 (655)
                      .+...+++..+  ++..++...+..++.++.... .+.++ + .+...+..          ...+++    .++++++|.
T Consensus       312 ~d~~~~~~~s~~e~~~~~d~~~e~~~d~d~~~dd-~~~~d-~-~E~e~~~~~~~~evn~~~~~~~~~n~i~~l~~v~~~~  388 (702)
T KOG2328|consen  312 FDAGLLNEDSMNEDDEFFDIEEEPAPDEDNPPDD-VEVFD-M-NELEELTSPDQMEVNNARRLSMDDNDISTLRPVDGNL  388 (702)
T ss_pred             ccccccccccccccchhhhhhccccccCCCCccc-ccccC-c-hhhccCCCcccccccccccccccccchhhcccccccc
Confidence            55444443321  111223322333332211100 00100 0 01111110          112222    233444432


Q ss_pred             hhccCCCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCcccccccCCCCCCCcccCCCCCCCCCCCCCCCCCCCCc
Q 042218          385 FLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKS  464 (655)
Q Consensus       385 ~~~~~~s~~~~~WAGPeHWK~r~~kk~~~~~~~~~~~~~~~~~~~kk~k~kkK~~~~IDF~~~~~~~~~~lF~~~~~~~s  464 (655)
                      .+...-.+..++||||+|||||+.||+     .++.++.......+++|+|+|..++|||....+.+.+.+|+++.+...
T Consensus       389 ~ysyf~~s~~~~WAGPdHWK~r~~kk~-----d~~~qs~~~~~~~t~rkkk~k~~~eiDF~k~lD~e~e~~ft~~~T~i~  463 (702)
T KOG2328|consen  389 EYSYFSMSQIKNWAGPDHWKFRATKKR-----DVFSQSNTQVDTRTKRKKKQKKDNEIDFAKALDYEVENFFTPGDTTIK  463 (702)
T ss_pred             eeeccCHHHhhccCCccceeeecccCC-----ccccccccccCcchhhhhhhhhhhhhhHhhhhhhhhhhhhCCCccccc
Confidence            221110112369999999999999973     322222221112223344456678999999777556678999888887


Q ss_pred             ccCCCCCCCCCCCCCCCCCCChhhhHhhhcCCCccchhhhhcccccccccccCCCCCCCCCCCCCCCCCCCCCC------
Q 042218          465 LLIPGNRAPSNTTLPEDCHYQPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMFDGQFDDG------  538 (655)
Q Consensus       465 ~~l~~~~~~~~~~LP~D~hy~~~~L~~LflkP~~~~~~~~~~~~~~~~~~~~~dy~~~~~~d~~~f~~~d~ddg------  538 (655)
                      ...+.+|++++++||+||||++++|+||||||+++++.+..+.   -.....++|.  .++|.+.+++++|+.+      
T Consensus       464 ~~~~~~~~~~~~~LP~Df~y~~d~l~klflkP~~kls~~~~g~---~~~~~~~~~~--~~nd~d~~~~~~~~~d~~~ed~  538 (702)
T KOG2328|consen  464 LPFQKKRNPRRTTLPTDFHYDPDRLFKLFLKPSIKLSKRNAGE---FEKKEGGDLG--SENDIDMIHDGDFDADLFDEDH  538 (702)
T ss_pred             cccccccCcccccCCcccccCHHHHHHHhhcchhhhhhhcccc---hhhhcccccc--CCCCcccCCCcccccccccccc
Confidence            7778889999999999999999999999999998886652211   0111222222  2222223333322111      


Q ss_pred             --------------CCC------------C-------CCCCCcccccCCccccccccccccccccccHHHHHHHHHHHhh
Q 042218          539 --------------NDP------------S-------DVEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQ  585 (655)
Q Consensus       539 --------------d~~------------~-------~~e~~~~Lv~~prkV~ki~V~YAk~AKkVDVK~LK~n~W~~L~  585 (655)
                                    ..+            +       +....+.+|+.|..+.||.|+|||+|||||||+||++||++|+
T Consensus       539 ~d~~vp~~g~~~~~~~~~p~e~~~~n~~~sq~~~~~~~~~~~s~~~~~~d~e~k~~V~yaK~aKkVDvk~LKks~w~~l~  618 (702)
T KOG2328|consen  539 FDDDVPPVGSIAGIAADQPAEASMMNVDASQAFGTQMDNTCNSTVVAKPDFEGKVIVPYAKRAKKVDVKKLKKSVWSLLQ  618 (702)
T ss_pred             ccccCCCccccccccccCcchhhhcCCCcccccccccccccccceecccccccceeeccccccccccHHHHHHHHHHHHH
Confidence                          000            0       0011256788898999999999999999999999999999999


Q ss_pred             cCCCCccC-------------C-CcccccHHHHHhhCCCCCCchhhhcCcChHHHHHHHHhhcccCCceeccCCCCCCce
Q 042218          586 ESPQMAAQ-------------D-PEKTVSFRSLLSSFPSGCRAAATIKDISPHLCFICLLHLANEHSLSIQGCANLDDLS  651 (655)
Q Consensus       586 ~~~~~~~~-------------~-e~~~~~F~~v~~~Lp~~~y~~~~~~dlS~s~cFICLLHLANEkgL~i~~~~dl~Dl~  651 (655)
                      ........             . ..+..+|+.|++.||. +|+++|.++|||||||||||||||||||+|++++||+||+
T Consensus       619 ~~~~~~~~~~~~~~~~e~~~e~~~~~~~~f~~i~q~l~~-~y~~~~~kdIS~slcFiclLHLANEhnL~L~~tEnl~Dv~  697 (702)
T KOG2328|consen  619 KLSQNAVPEENIHSEPEEHGEEESKGEKSFSQIYQGLPD-LYTTEMSKDISPSLCFICLLHLANEHNLQLIGTENLSDVQ  697 (702)
T ss_pred             hhcccccchhhcccchhhhccccccchhHHHHHHhcchh-hcchhhhcccchhHHHHHHHHhcccccceeeccCchhhhe
Confidence            87654321             1 1356789999999999 9999999999999999999999999999999999999999


Q ss_pred             eecC
Q 042218          652 IILP  655 (655)
Q Consensus       652 I~~~  655 (655)
                      |+|.
T Consensus       698 Irq~  701 (702)
T KOG2328|consen  698 IRQG  701 (702)
T ss_pred             eecC
Confidence            9973

>COG5229 LOC7 Chromosome condensation complex Condensin, subunit H [Chromatin structure and dynamics / Cell division and chromosome partitioning]

Probab=100.00  E-value=1.2e-97  Score=781.08  Aligned_cols=555  Identities=27%  Similarity=0.420  Sum_probs=334.0

Q ss_pred             HHHHHHHHHHHHhhcccccccccCcchhhHHHHHHhhhccccccchhhhhhcccccceeeeeeechhHHHHHHHHHhhhh
Q 042218           74 ILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGIN  153 (655)
Q Consensus        74 i~~~~~~~ikl~teNKIn~kNaw~l~LID~~~~~~~~~~~~~~~~NFq~As~tLda~~KIYs~RVDsv~~et~k~l~gl~  153 (655)
                      ++.+|++||||||+||||++|+|+|+|||||++|-..+++  +.|||||||||||||+|||++|||||.+||+|||+||+
T Consensus         2 ~~~nfeeWiK~AtdNKIns~NtWnfaLIDyF~d~d~lrdg--e~INFQKAScTLDGC~KIYssRvDsVstetgkLLsGla   79 (662)
T COG5229           2 SNDNFEEWIKAATDNKINSKNTWNFALIDYFTDIDELRDG--EGINFQKASCTLDGCAKIYSSRVDSVSTETGKLLSGLA   79 (662)
T ss_pred             ccccHHHHHHHHhhCccccccchhhHHHHHhhhHHHhccc--CCccceeccccccchhhhhhccchHhhhhHHHHhhccc
Confidence            3678999999999999999999999999999999777665  45999999999999999999999999999999999998


Q ss_pred             hcCCCCccccccccccccccccccCCccccccccCCccchhcccccccccccccccccCccccccccccccCchhhhhhh
Q 042218          154 RAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDEGGAKGLLLN  233 (655)
Q Consensus       154 r~~~~~~~~~~~e~~~~~~~~~~~~~kk~~~r~~~~~~Tle~~~~~i~~~~~d~~~~vDPlF~k~~a~fDeg~a~glLln  233 (655)
                      ....+..+.  ++|++.+.......+++.++|+.+..+|+.+.|+.|.+|+++.++.+||||+|+++.||||||+|||||
T Consensus        80 NDSn~~n~~--~~G~D~E~DD~D~nnt~err~~qR~~kT~l~~fe~I~~kk~~~el~idplfkk~cvDfDE~GAK~LLlN  157 (662)
T COG5229          80 NDSNGGNGE--GLGGDIEIDDPDRNNTEERRKKQRVGKTTLVKFEKITIKKNICELNIDPLFKKRCVDFDEGGAKSLLLN  157 (662)
T ss_pred             ccccccccc--ccCcccccCchhhhhHHHHHHHHhhhhhhhhhhheeehhhhhhccccchhhHhhccCcccccchhhhhc
Confidence            433222211  122222222211222332345566788999999999999999999999999999999999999999999


Q ss_pred             cCcCCCCceEeecCCCCCC-----CC--CccccCC-CCCCCcchhhhHHHHHHHH--hc----ccccCCCCcchhhhh--
Q 042218          234 NLGVYTGCQVLFDSQEVPG-----KG--MSCASQH-SMSDTIDLSFASEYIEQMV--LN----MQAKDEISPTLRTIV--  297 (655)
Q Consensus       234 ~L~~~~~~~v~fDs~~~~~-----~~--~~~~~~~-~~~~~idls~~~~~~~~~l--~~----~~~~~~IcPsl~~f~--  297 (655)
                      +|.|+..+||+|||+..-.     +.  ...+.+. +....++---..   .+.+  ..    ....--|||||.+=.  
T Consensus       158 ~L~iDn~~ri~fdss~IKD~eN~~q~~lq~~~Ee~~~~~s~V~d~~~~---sqslgi~~~~~T~~Dsv~~~PSmeDe~~~  234 (662)
T COG5229         158 TLNIDNTKRLYFDSSPIKDTENVGQGKLQRKEEELIERDSLVDDLMID---SQSLGISSNDSTVNDSVISAPSMEDEILG  234 (662)
T ss_pred             cccccccceEEEecCcccchhhhhhhhhccchhhhhhhhccccccccc---chhccccccccccccccccccchhhhhcc
Confidence            9999999999999985211     00  0000000 000000000000   0000  00    011224677776411  


Q ss_pred             ------------------------hhcCCCCcCCCCcccchhhh-----hhhhhhhcCCCccCCCCCCCCCCCCCCCCCC
Q 042218          298 ------------------------NQYDEDNRRSSDTFSSIQKL-----VDQVEAVHNNEAESDGVAFDDCGTNDFYHDD  348 (655)
Q Consensus       298 ------------------------~~~d~~~~~~~~~~~~~~~~-----~~~~d~~~~~~~~dd~~~~~~~~~~dfd~d~  348 (655)
                                              ++....+++...+.+.....     ..++...+++.      .+.+.  ..|++++
T Consensus       235 L~m~~iK~l~~~vc~i~gt~~vd~~~~~~d~~a~~lis~s~~e~~~i~~~~ee~a~d~dn------~~~D~--~~~~M~e  306 (662)
T COG5229         235 LGMDFIKVLRMSVCRIEGTVIVDDFKMSMDFPAGLLISPSISEDKEIRDIVEEPAVDNDN------EVSDS--DGFDMGE  306 (662)
T ss_pred             cchhHHHHhhhhhhhccceEEEeccchhccccchhccCCCcccchhHHHHHHhhccCCCc------ccccc--ccccccc
Confidence                                    00001111111111111000     00111111110      01110  1233322


Q ss_pred             Cccc-ccccCC--CCCCCCCCCCCCCC-Cchhh-hhhhHHhhhccCCCcccccccCCCCCcccccCCCCCC----CCCCC
Q 042218          349 QSSI-VDENLG--GSDPTFTSYLEDPD-TDDRF-ERVDEYLFLNLGFSSKQNAWAGPDHWKYRKAKGPVEG----SKDDP  419 (655)
Q Consensus       349 ~~~~-~~~~~~--~~d~~~~~~~e~~~-~~~~~-~~~~~y~~~~~~~s~~~~~WAGPeHWK~r~~kk~~~~----~~~~~  419 (655)
                      +.+. +..+..  -.++.  ...+.+. .+..+ ..+..||+..+     .++||||+|||+++.||.+..    .+.+.
T Consensus       307 ~~~~~~gd~~e~n~~~~~--~~n~N~S~~~s~~~k~vy~yfd~s~-----~knWaGpeHWkvqa~kk~vNk~S~l~eet~  379 (662)
T COG5229         307 HAGLFSGDNFELNEILPP--SSNQNPSTTGSIFEKDVYKYFDFSY-----FKNWAGPEHWKVQAKKKRVNKESDLLEETR  379 (662)
T ss_pred             ccCCCCCccccccccCCc--cccCCccchhhhhhhhHHHHhhHHH-----hhcCCCchhhhHHHhhccccchhhhhhhcc
Confidence            2210 000100  00000  0000000 11111 34788988865     579999999999988875320    01111


Q ss_pred             CCC--CC---CCcccccccCCCCCCCcccCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCChhhhHhhhc
Q 042218          420 ALE--GG---SPVRTKKIRGRRQPEPDIDFKKALDEKFPDLFAPPKNPKSLLIPGNRAPSNTTLPEDCHYQPEDLIKLFL  494 (655)
Q Consensus       420 ~~~--~~---~~~~~kk~k~kkK~~~~IDF~~~~~~~~~~lF~~~~~~~s~~l~~~~~~~~~~LP~D~hy~~~~L~~Lfl  494 (655)
                      +..  ..   ....++++ +|.|....|||+...+  .+.+|.|..+........+++..+++||+||||++++|+|||+
T Consensus       380 Tt~ttDk~~~k~~~T~~k-~kqk~~~~iDF~~tvD--~e~~~~pg~t~~d~p~~~~kr~~r~lLPdDf~~~~~rl~rlf~  456 (662)
T COG5229         380 TTITTDKTDDKSMDTSGK-QKQKEASFIDFTETVD--YEGMLEPGNTLFDPPFIVEKRESRHLLPDDFRLEVERLYRLFV  456 (662)
T ss_pred             ccccccccccccccchhh-hhhhhhhhcchhhhcc--hhheecCCccccCcchhhhcccccccCcchhhccHHHHHHHhh
Confidence            111  00   01112222 2334456899998554  4467887666555555556778899999999999999999999


Q ss_pred             CCCccchhhhhcc--c---ccccccccCCCCCCCCCCC---CCC-------CCCC----CCCCCCCCCC--CCCcccccC
Q 042218          495 LPNVMCLDKRRRR--K---SSVERQQTDDHEGFPSWGN---ENM-------FDGQ----FDDGNDPSDV--EGSDTLVSQ  553 (655)
Q Consensus       495 kP~~~~~~~~~~~--~---~~~~~~~~~dy~~~~~~d~---~~f-------~~~d----~ddgd~~~~~--e~~~~Lv~~  553 (655)
                      ||+..++....+.  .   ....++++-+-....-|..   ++|       +-++    |.+.-+..+.  .-++++.+.
T Consensus       457 kpKMSl~~~s~Glf~k~~~~a~~~endid~i~~~~f~~d~ed~~~e~ip~~G~G~~DnP~e~~m~~~~~sq~f~DN~~~s  536 (662)
T COG5229         457 KPKMSLFSHSSGLFYKKDQAAAEEENDIDHIPASCFIEDPEDEFVEDIPSQGVGALDNPFEDDMDGVDFSQKFPDNEEAS  536 (662)
T ss_pred             ccccccccCCCcchhhhhhhhhhhccCCCCCCccccccCcchhhhccCCccCcCccCCcccccccCCchhhcCCcchhhh
Confidence            9988777553321  0   0001111111100000000   000       0000    0000000000  012455555


Q ss_pred             CccccccccccccccccccHHHHHHHHHHHhhcCCCCcc--------------CC-CcccccHHHHHhhCCCCCCchhhh
Q 042218          554 PRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMAA--------------QD-PEKTVSFRSLLSSFPSGCRAAATI  618 (655)
Q Consensus       554 prkV~ki~V~YAk~AKkVDVK~LK~n~W~~L~~~~~~~~--------------~~-e~~~~~F~~v~~~Lp~~~y~~~~~  618 (655)
                      -+.--+-.|+|+|+|||||||+||+++|++|.-.....+              +. .-.+++|.++++.||+ +|..+..
T Consensus       537 vkL~~~D~i~y~k~~KKVdVr~LK~~vw~s~~~~~t~~ds~~N~~~s~SE~~te~~s~~~~kF~~i~~gi~k-~Y~~~el  615 (662)
T COG5229         537 VKLDLQDKIPYRKTPKKVDVRKLKDSVWDSVKGGSTSHDSRKNREQSSSETHTELSSTKELKFSDIFEGIPK-VYNGEEL  615 (662)
T ss_pred             hhcccccccccccCcccccHHHHHHHHHHHhcccccccccccccccccccchhhhccccchhHHHHHhcchh-hhCcccc
Confidence            544445679999999999999999999999976543211              01 1246799999999999 9999999


Q ss_pred             cCcChHHHHHHHHhhcccCCceeccCCCCCCceeec
Q 042218          619 KDISPHLCFICLLHLANEHSLSIQGCANLDDLSIIL  654 (655)
Q Consensus       619 ~dlS~s~cFICLLHLANEkgL~i~~~~dl~Dl~I~~  654 (655)
                      ++|||||||||||||||||||.|..++++.|+.|+|
T Consensus       616 KDIStsfcFIclLHLANEhnlqlt~~en~~dv~~~~  651 (662)
T COG5229         616 KDISTSFCFICLLHLANEHNLQLTAVENDIDVQMLQ  651 (662)
T ss_pred             cchhhHHHHHHHHHhhccccceeeecCCccceeecc
Confidence            999999999999999999999999999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	655
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.6 bits (146), Expect = 1e-09
 Identities = 53/348 (15%), Positives = 114/348 (32%), Gaps = 88/348 (25%)

Query: 37  RAKARAARAAAIRRKPVTVHYPLPQHGHSDSCLGKDQILELFHNC--------------- 81
           R K      +A     +++        H    L  D++  L                   
Sbjct: 273 RFKQVTDFLSAATTTHISL-------DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 82  ----IKLASENKINQKNTWE----LNLIDHLCEIIK----VEEENDVETNFQKASCTLEA 129
               + + +E+  +   TW+    +N  D L  II+    V E  +    F + S     
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVN-CDKLTTIIESSLNVLEPAEYRKMFDRLS-VFPP 383

Query: 130 GVKIYSLRV------DSVHSEAYKVLGGINRAG--QENEQDTRVEDKNAHSVHREGYSKK 181
              I    +      D + S+   V+  +++    ++  +++ +      S++       
Sbjct: 384 SAHI-PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI---PSIYL------ 433

Query: 182 DIEKKLSPLSTLESSF-EALNV-KKFDA-AFAVDPL---------YHQTSAQFDEGGAKG 229
           +++ KL     L  S  +  N+ K FD+       L         +H  + +  E   + 
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE---RM 490

Query: 230 LLLNNLGVYTGCQVLFD----SQEVPGKGMSCASQHSMSDTI-DLSFASEYIEQMVLNMQ 284
            L   +          D     Q++     +  +  S+ +T+  L F   YI     N  
Sbjct: 491 TLFRMV--------FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI---CDNDP 539

Query: 285 AKDEISPTLRTIVNQYDEDNRRSSDTFSSIQ-KLVDQVEAVHNNEAES 331
             + +   +   + + +E+   S  T   ++  L+ + EA+   EA  
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYT-DLLRIALMAEDEAIF-EEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 4e-08
 Identities = 96/651 (14%), Positives = 172/651 (26%), Gaps = 178/651 (27%)

Query: 61  QHGHSDSCLGKDQILELFHNCIKLASENKINQKNTWELNLI-DHLCEIIKVEE------- 112
            H H D   G+ Q     +    + S  +    + ++   + D    I+  EE       
Sbjct: 3   HHHHMDFETGEHQ-----YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMS 57

Query: 113 ENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHS 172
           ++ V    +     L    ++    V+ V    YK L  ++    E  Q + +       
Sbjct: 58  KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL--MSPIKTEQRQPSMMTRM---- 111

Query: 173 VHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAV-DPLYHQTSAQFDEGGAKGLL 231
                Y      ++   L      F   NV +      +   L     A+          
Sbjct: 112 -----Y-----IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK---------- 151

Query: 232 LNNLGVY--TGCQVLFDSQEVPGK----GMSCAS---QHSMSDTID-LSFASEYIEQMVL 281
             N+ +    G           GK       C S   Q  M   I  L+  +    + VL
Sbjct: 152 --NVLIDGVLGS----------GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL 199

Query: 282 NMQAK--DEISPTLRTIVNQYDEDNRRSSDTFSSIQKLVDQVEAVHNNEAES----DGV- 334
            M  K   +I P   +  +       R     + +++L+      + N          V 
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL--KSKPYEN---CLLVLLNVQ 254

Query: 335 ------AFD-DC----GTNDFYHDDQSS-------IVDENLGGSDPT-----FTSYLEDP 371
                 AF+  C     T      D  S        +D +     P         YL+  
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314

Query: 372 DTDDRFERVDEY-LFLNLGFSSKQNAWAGPDHWKYRKAKGPVEGSKDDPALEGGSPVRTK 430
             D   E +      L++   S ++   G   W   K    V   K    +E        
Sbjct: 315 PQDLPREVLTTNPRRLSIIAESIRD---GLATWDNWKH---VNCDKLTTIIE-------S 361

Query: 431 KIRGRRQPEPDIDFKKALDEKFPDL--FAPPKNPKSLLIPGNRAPSNTTL----PEDCHY 484
            +      EP  +++K     F  L  F     P S  IP         L     +    
Sbjct: 362 SL---NVLEPA-EYRKM----FDRLSVF-----PPSAHIPTI------LLSLIWFDVIKS 402

Query: 485 QPEDLIKLFLLPNVMCLDKRRRRKSSVERQQTDDHEGFPSWGNENMFDGQFD-DGNDPSD 543
               ++                + S VE+Q  +     P            +      ++
Sbjct: 403 DVMVVVNKL------------HKYSLVEKQPKESTISIP--------SIYLELKVKLENE 442

Query: 544 VEGSDTLVSQPRQVQKVEVEYDKTSKQVDVQTLKETIWVHIQESPQMAAQDPEKTVSFRS 603
                ++V      +    + D        Q     I  H+        + PE+   FR 
Sbjct: 443 YALHRSIVDHYNIPKT--FDSDDLIPPYLDQYFYSHIGHHL-----KNIEHPERMTLFRM 495

Query: 604 LLSSF------------PSGCRA--AATIKDISPHLCFICLLHLANEHSLS 640
           +   F                      T++ +  +  +IC      E  ++
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00