Citrus Sinensis ID: 042323

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTLKQFV
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHEEEEEccHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccccccccccccccccEEEcccccccHccccccccHHHHHHcccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHcc
Coil and Loop (DISEMBL)
MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLfwknrksgtlqelgdsEKAILLEesnvgvkgeespqslivqegeigqqeksidsgsefvsdefqsslpiveaeESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVslgdsensssvsatasnpllGDILSLASAGLYAVYITLIRKklpdddgkngdaSMAQFLGFLGLFNLIIFLPVALILHFtklepfyrLTLKQFV
Flexible Loop (DISEMBL)
MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKsgtlqelgdseKAILLEesnvgvkgeespQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIveaeesaakgrwtRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTLKQFV
Low Complexity Region (SEG)
MTSEVWKWGLGLIYivavaiiwiaasfvvQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYttvtsntilsstsslftflvsllflGEKFTWVKLVSVLLCMAGTIIVSLGDsensssvsatasnPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQflgflglfnliiflPVALILHFTKLEPFYRLTLKQFV
Disordered region (IsUnstruct)
****VWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRK************************************************************************GRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVT***********FTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLG**************PLLGDILSLASAGLYAVYITLIRKKLP********ASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTLK***
Disordered Region (DISOPRED)
*****WK*GLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKSGT*************************************************************EAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL***************PLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTLKQFV
Disordered Region (DISEMBL)
MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEG************SEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD**********ASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTLKQFV
Disordered Region (DISPRO)
**SEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWK**************************************************************SLPIVEA****AKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD***********SNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTL**FV
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTLKQFV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	322	2.2.26 [Sep-21-2011]
Q8R314	524	Solute carrier family 35	yes	no	0.909	0.559	0.315	3e-30
Q5R6J3	523	Solute carrier family 35	yes	no	0.900	0.554	0.315	3e-28
A6QL92	524	Solute carrier family 35	yes	no	0.909	0.559	0.293	7e-28
Q8WV83	523	Solute carrier family 35	yes	no	0.900	0.554	0.309	2e-27
Q4R794	432	Solute carrier family 35	N/A	no	0.645	0.481	0.355	1e-25
Q03730	393	Uncharacterized vacuolar	yes	no	0.816	0.669	0.288	2e-25
O94654	341	Uncharacterized transport	yes	no	0.760	0.718	0.275	2e-11
Q04083	370	Thiamine-repressible mito	no	no	0.465	0.405	0.393	3e-11
Q8IY50	421	Solute carrier family 35	no	no	0.416	0.318	0.315	6e-10
Q1LZI2	421	Solute carrier family 35	no	no	0.416	0.318	0.302	6e-09

>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1

 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 171/345 (49%), Gaps = 52/345 (15%)

Query: 3   SEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYI-------- 54
           S+  +  LG++ ++ V +IW+A+S +   V      PF  T+   S+FV+Y+        
Sbjct: 64  SQRRRMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKP 123

Query: 55  ------------PIAEIGRYLVDTYGSVLFWKNRKSGTLQE-------LGD--SEKAILL 93
                       P A       + Y +        S +L E         D  SEK   L
Sbjct: 124 WRQQCTRGFRGKPAAFFAD--AEGYFAACTTDTSMSSSLSEPLYVPVKFHDLPSEK---L 178

Query: 94  EESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GR 151
           E +N+G   E++P+   V+   I  + + + S     +   + S P V+ +ES  K  G+
Sbjct: 179 ESTNIGT--EKTPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPTVKDQESILKTVGK 235

Query: 152 WTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFL---GE 208
            T T+VAK+S   C  WFLA L++  +L  T V    ILSSTS LFT +++ +F    G+
Sbjct: 236 LTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGD 295

Query: 209 KFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIR 268
           +FT  KL++V+L + G ++V+L  SE S      A    +G I SLA A  YAVYI +I+
Sbjct: 296 RFTLSKLLAVILSIGGVVLVNLSGSEKS------AGRDTIGSIWSLAGAMFYAVYIVMIK 349

Query: 269 KKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPF 313
           +K+  +D  +    +  F GF+GLFNL++  P   +LH+T  E F
Sbjct: 350 RKVDREDKLD----IPMFFGFVGLFNLLLLWPGFFLLHYTGFEDF 390

Putative solute transporter.
Mus musculus (taxid: 10090)

>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1

 Score =  126 bits (316), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 49/339 (14%)

Query: 7   KWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYI-------PIAE- 58
           +  LG++ ++ V +IW+A+S +   V      PF  T+   S+FV+Y+       P  + 
Sbjct: 68  RMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQ 127

Query: 59  -----IGRYLV-----DTYGSVLFWKNRKSGTLQE-------LGD--SEKAILLEESNVG 99
                 G++       + Y +        + +L E         D  SEK    E +N+ 
Sbjct: 128 CTRGLRGKHAAFFADAEGYFAACATDTTMNSSLSEPLYVPVKFHDLPSEKP---ESTNID 184

Query: 100 VKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GRWTRTRV 157
              E++P+   V+   I  + + + S     S   + S P+ E +ES  K  G+ T T+V
Sbjct: 185 T--EKTPKKSRVRFSNI-MEIRQLPSNHALESKLSRMSYPVKE-QESILKTVGKLTATQV 240

Query: 158 AKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFL---GEKFTWVK 214
           AK+S   C  WFLA L++  +L  T V    ILSSTS LFT +++ +F    G++FT  K
Sbjct: 241 AKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSK 300

Query: 215 LVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDD 274
           L++V+L + G ++V+L  SE S      A    +G I SLA A LYAVYI +I++K+  +
Sbjct: 301 LLAVILSIGGVVLVNLSGSEKS------AGRDTIGSIWSLAGAMLYAVYIVMIKRKVDRE 354

Query: 275 DGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPF 313
           D  +    +  F GF+GLFNL++  P   +LH+T  E F
Sbjct: 355 DKLD----IPMFFGFVGLFNLLLLWPGFFLLHYTGFEDF 389

Putative solute transporter.

Pongo abelii (taxid: 9601)

>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1

 Score =  124 bits (312), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 162/337 (48%), Gaps = 44/337 (13%)

Query: 7   KWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYI-------P---- 55
           +  LG++ ++ V +IW+A+S +   V      PF  T+   S+FV+Y+       P    
Sbjct: 68  RMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIVWKPWRQQ 127

Query: 56  -----IAEIGRYLVDTYGSVLFWKNRKSGTLQELGDSEKAILL---------EESNVGVK 101
                  +   +  D  G   ++    + T      SE   +          +  N  + 
Sbjct: 128 CTRGFRGKHATFFADAEG---YFAACTTDTTMNSSLSEPLYVPVKFHDLPSEKPENTNID 184

Query: 102 GEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GRWTRTRVAK 159
            E+ P+   V+   I  + + + S     +   + S P V+ +ES  K  G+ T T+VAK
Sbjct: 185 TEKIPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPTVKEQESLLKTVGKLTATQVAK 243

Query: 160 VSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFL---GEKFTWVKLV 216
           +S   C  WFLA  ++  +L  T V    ILSSTS LFT +++ +F    G++FT  KL+
Sbjct: 244 ISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNSGDRFTLSKLL 303

Query: 217 SVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDG 276
           +V+L + G ++V+L  SE S   +       +G I SL  A LYAVYI +I++K+  +D 
Sbjct: 304 AVILSIGGVVLVNLSGSEKSPGRNT------IGSIWSLVGAMLYAVYIVMIKRKVDRED- 356

Query: 277 KNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPF 313
                 +  F GF+GLFNL++  P   +LH+T  E F
Sbjct: 357 ---KLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDF 390

Putative solute transporter.

Bos taurus (taxid: 9913)

>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1

 Score =  122 bits (307), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 170/339 (50%), Gaps = 49/339 (14%)

Query: 7   KWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYI-------PIAE- 58
           +  LG++ ++ V +IW+A+S +   V      PF  T+   S+FV+Y+       P  + 
Sbjct: 68  RMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQ 127

Query: 59  -----IGRYLV-----DTYGSVLFWKNRKSGTLQE-------LGD--SEKAILLEESNVG 99
                 G++       + Y +        + +L E         D  SEK    E +N+ 
Sbjct: 128 CTRGLRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSEKP---ESTNID 184

Query: 100 VKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GRWTRTRV 157
              E++P+   V+   I  + + + S     +   + S P+ E +ES  K  G+ T T+V
Sbjct: 185 T--EKTPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPVKE-QESILKTVGKLTATQV 240

Query: 158 AKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFL---GEKFTWVK 214
           AK+S   C  WFLA L++  +L  T V    ILSSTS LFT +++ +F    G++FT  K
Sbjct: 241 AKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSK 300

Query: 215 LVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDD 274
           L++V+L + G ++V+L  SE        A    +G I SLA A LYAVYI +I++K+  +
Sbjct: 301 LLAVILSIGGVVLVNLAGSEKP------AGRDTVGSIWSLAGAMLYAVYIVMIKRKVDRE 354

Query: 275 DGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPF 313
           D  +    +  F GF+GLFNL++  P   +LH+T  E F
Sbjct: 355 DKLD----IPMFFGFVGLFNLLLLWPGFFLLHYTGFEDF 389

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 126/225 (56%), Gaps = 17/225 (7%)

Query: 94  EESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GR 151
           +  +  +  E++P+   V+   I  + + + S     +   + S P+ E +ES  K  G+
Sbjct: 86  KPESTNIDTEKTPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPVKE-QESILKTVGK 143

Query: 152 WTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFL---GE 208
            T T+VAK+S   C  WFLA L++  +L  T V    ILSSTS LFT +++ +F    G+
Sbjct: 144 LTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGD 203

Query: 209 KFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIR 268
           +FT  KL++V+L + G ++V+L  SE S      A    +G I SLA A LYAVYI +I+
Sbjct: 204 RFTLSKLLAVILSIGGVVLVNLSGSEKS------AGRNTIGSIWSLAGAMLYAVYIVMIK 257

Query: 269 KKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPF 313
           +K+  +D  +    +  F GF+GLFNL++  P   +LH+T  E F
Sbjct: 258 RKVDREDKLD----IPMFFGFVGLFNLLLLWPGFFLLHYTGFEDF 298

Putative solute transporter.

Macaca fascicularis (taxid: 9541)

>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 147/319 (46%), Gaps = 56/319 (17%)

Query: 7   KWGLGLIYIVAVAIIWIAASFVVQSVV--DAGVSPFLVTYICNSLFVVYI-PIAEIGRYL 63
           +W LGL+ +  V I+W+ +SF++  +   D+   PF +TY   + F+ Y+ P A      
Sbjct: 12  RWTLGLLMLGLVIILWVLSSFLINLIFEDDSYRKPFFITYTNTAAFIFYLFPTA------ 65

Query: 64  VDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSI 123
                                    KA+++   + G +     + ++ +EG      +S+
Sbjct: 66  -------------------------KAVVVNYKDTG-RANVHRELIMEEEGTGSDSNRSV 99

Query: 124 DSGSEFVSDEFQSSLPIVEAEESA-AKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYT 182
           D  S  +++        +EA   A  K R T     K+S   C  WF A L  N SL +T
Sbjct: 100 DMTSPLLTN--------LEAGTHANQKKRLTLYETIKLSAEFCILWFTANLVTNASLAFT 151

Query: 183 TVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENS------ 236
           +V S TILS+TSS FT  +  +   E  +  K++   +   G I+V+  DS         
Sbjct: 152 SVASQTILSTTSSFFTLFIGAICHVESLSKSKVLGSFISFVGIIMVTKSDSHQRYQRHIA 211

Query: 237 --SSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFN 294
             S     A   L+G++L+LA A LY VY TL+++++ D+   N    M  F GF+GLFN
Sbjct: 212 DVSGDDNDAVQVLIGNLLALAGAVLYGVYSTLLKREVGDETRVN----MKIFFGFVGLFN 267

Query: 295 LIIFLPVALILHFTKLEPF 313
           L+   P  ++L F   EPF
Sbjct: 268 LLFLWPSLIVLDFFGWEPF 286

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 64/309 (20%)

Query: 7   KWGLGLIYIVAVAIIWIAASFVVQSVVDAG--VSPFLVTYICNSLFVVYIPIAEIGRYLV 64
           K  LG++ ++ V  +W+ +SF+  S++D     SPFL+TYI    FV Y+    I  Y  
Sbjct: 8   KHALGVVLLLFVVFLWLISSFLTSSLLDDDNFFSPFLITYINTGTFVFYL----IPWYFS 63

Query: 65  DTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSID 124
           +        K RK   + EL   E                               + S +
Sbjct: 64  EK-------KTRKHRLMSELSMYESV----------------------------HDSSFN 88

Query: 125 SGSEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTV 184
            G+                  S    R T    A +SL  C  WF A    N SL +T V
Sbjct: 89  LGTR---------------PNSPLGFRQT----AYLSLGFCIIWFAANYFSNSSLGFTNV 129

Query: 185 TSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATAS 244
            S TI+SS S  FT  +  +   E+FT  KL++++  + G IIV   D++ +    +  S
Sbjct: 130 ASFTIISSMSGFFTLGLGTIVNVERFTLSKLLALMASVGGVIIVVTQDAKQADLNDSPPS 189

Query: 245 NPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALI 304
            P LG+  +L +A LY  Y  +++  + ++       S   F G +GLF+LI+  P  +I
Sbjct: 190 RPALGNAYALLAALLYGCYSVMVKFHITEESC----VSTRLFFGLVGLFDLILLWPFLII 245

Query: 305 LHFTKLEPF 313
           LH   +E F
Sbjct: 246 LHLYGVERF 254

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1

 Score = 69.7 bits (169), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 5/155 (3%)

Query: 159 KVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSV 218
           ++SLL C  WF+A L  N +L YTTV S+TILSSTSS FT  ++     E F+  KL+ +
Sbjct: 119 RLSLLFCVLWFVANLAANAALSYTTVASSTILSSTSSFFTLFLATSLGIETFSTKKLLGL 178

Query: 219 LLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKN 278
            + + G I++ +  S+   SVS  AS+ L+G+ L+L  +  Y+VY TL++ ++    G  
Sbjct: 179 FVSLFGIILIVMQSSKQQDSVS--ASSFLVGNTLALLGSLGYSVYTTLLKYEI-SSKGLR 235

Query: 279 GDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPF 313
            D  M  FLG++G+F  ++F P+ +IL  T +E F
Sbjct: 236 LDIQM--FLGYVGIFTFLLFWPILIILDITHMETF 268

May be involved in thiaminediphosphate transport across the mitochondrial membrane.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q8IY50|S35F3_HUMAN Solute carrier family 35 member F3 OS=Homo sapiens GN=SLC35F3 PE=2 SV=2

 Score = 65.5 bits (158), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 15/149 (10%)

Query: 166 PF---WFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCM 222
           PF   W L    +  ++K    T  ++L   +  F FL+S + L ++F  V++V+ +L +
Sbjct: 156 PFGVLWTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAI 215

Query: 223 AGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDAS 282
           AG ++++  D  +S SV        +G  L +ASA + A+Y  L   KL     K G+A+
Sbjct: 216 AGIVMMTYADGFHSHSV--------IGIALVVASASMSALYKVLF--KLLLGSAKFGEAA 265

Query: 283 MAQFLGFLGLFNLIIFLPVALILHFTKLE 311
           +  FL  LG+FN++    + +IL+FTK+E
Sbjct: 266 L--FLSILGVFNILFITCIPIILYFTKVE 292

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q1LZI2|S35F3_MOUSE Solute carrier family 35 member F3 OS=Mus musculus GN=Slc35f3 PE=2 SV=1

 Score = 62.0 bits (149), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 15/149 (10%)

Query: 166 PF---WFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCM 222
           PF   W L    +  ++K    T  ++L   +  F FL+S + L ++F  V++V+ +L +
Sbjct: 156 PFGVLWTLTNYLYLHAIKKINATDVSVLFCCNKSFVFLLSWIVLRDRFMGVRIVAAILAI 215

Query: 223 AGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDAS 282
           AG ++++  D  +S SV        +G  L + SA + A+Y  L   KL     K G+A+
Sbjct: 216 AGIVMMTYADGFHSHSV--------IGIALVVGSASMSALYKVLF--KLLLGSAKFGEAA 265

Query: 283 MAQFLGFLGLFNLIIFLPVALILHFTKLE 311
           +  FL  LG+FN++    + +IL+FT++E
Sbjct: 266 L--FLSILGVFNILFITCIPVILYFTRVE 292

Putative solute transporter.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
224132196	434	predicted protein [Populus trichocarpa]	0.978	0.725	0.699	1e-122
225465455	435	PREDICTED: solute carrier family 35 memb	0.990	0.733	0.703	1e-118
297829256	439	membrane protein [Arabidopsis lyrata sub	0.987	0.724	0.680	1e-118
15231381	438	EamA-like transporter [Arabidopsis thali	0.987	0.726	0.679	1e-117
363807016	438	uncharacterized protein LOC100788015 [Gl	0.968	0.712	0.677	1e-116
255560175	430	conserved hypothetical protein [Ricinus	0.990	0.741	0.684	1e-113
357505295	441	Solute carrier family 35 member F5 [Medi	0.968	0.707	0.693	1e-106
449521826	424	PREDICTED: solute carrier family 35 memb	0.953	0.724	0.665	1e-103
449453262	424	PREDICTED: solute carrier family 35 memb	0.953	0.724	0.665	1e-103
147789786	413	hypothetical protein VITISV_001016 [Viti	0.922	0.719	0.642	1e-100

>gi|224132196|ref|XP_002321279.1| predicted protein [Populus trichocarpa] gi|222862052|gb|EEE99594.1| predicted protein [Populus trichocarpa]

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/323 (69%), Positives = 269/323 (83%), Gaps = 8/323 (2%)

Query: 4   EVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYL 63
           + W+W  GL+YI +VA IWIAASFVVQSVVDAGVSPFLVTYICNSLFV+YIP+ EIGRYL
Sbjct: 5   KAWRWVRGLVYIFSVANIWIAASFVVQSVVDAGVSPFLVTYICNSLFVIYIPMVEIGRYL 64

Query: 64  VDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSI 123
            D+YGS+LFW+N+K  +L+EL +SE+AILL +  +GVK +E   S+I+++G     EK++
Sbjct: 65  EDSYGSLLFWRNKKRSSLEELRESEQAILLGDGYLGVKADELNPSVIMEDGISSLNEKAV 124

Query: 124 DSGSEFVSDEFQSSLPIVEAEESA-----AKGRWTRTRVAKVSLLICPFWFLAQLTFNLS 178
            S  + VS+E + +LP V+A+E        KGRWTR RVAKVSLLICPFWFLAQLTFNLS
Sbjct: 125 HSNLDSVSNELERTLP-VQADEDVNKGVDEKGRWTRARVAKVSLLICPFWFLAQLTFNLS 183

Query: 179 LKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSS 238
           LKYT+VTSNTILSS SSLFTF+VSL+FLGEKFTWVKL+SVL CMAGTIIVSLGDSE  + 
Sbjct: 184 LKYTSVTSNTILSSVSSLFTFVVSLVFLGEKFTWVKLLSVLFCMAGTIIVSLGDSE--TG 241

Query: 239 VSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIF 298
           +SA +S PLLGDIL+L SAGLYAVYITLIR KLPD+DGK+G ASMAQFLG+LGLFN+IIF
Sbjct: 242 LSAVSSKPLLGDILALVSAGLYAVYITLIRLKLPDNDGKSGHASMAQFLGYLGLFNVIIF 301

Query: 299 LPVALILHFTKLEPFYRLTLKQF 321
           LPVAL+L  T LEP  +LT KQF
Sbjct: 302 LPVALVLDLTNLEPLCKLTWKQF 324

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465455|ref|XP_002267492.1| PREDICTED: solute carrier family 35 member F5 [Vitis vinifera]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/327 (70%), Positives = 270/327 (82%), Gaps = 8/327 (2%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           M +EVW+W LGLIYIVAVA IWIAAS+VVQSVVDAGVSPFL+TYICNSLFV+YIP+ EIG
Sbjct: 1   MRTEVWRWVLGLIYIVAVASIWIAASYVVQSVVDAGVSPFLITYICNSLFVIYIPLVEIG 60

Query: 61  RYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQE 120
           RYL D+YGS+ FW+++K   LQE+GDSE+ +LL ESN+G +   S Q +I+++GEI Q  
Sbjct: 61  RYLEDSYGSLCFWRSKKDIGLQEIGDSEQVVLLGESNLGARVGGSKQPVILEQGEISQHR 120

Query: 121 KSIDSGSEFVSDEFQSS---LPIVEA---EESAAKGRWTRTRVAKVSLLICPFWFLAQLT 174
             I S  +   + F+++     IV     E+  +KGRWTRTRVAK SLL+CPFWFLAQLT
Sbjct: 121 IGIVSELDLKVERFEAASLDQAIVRKDGDEQLDSKGRWTRTRVAKASLLVCPFWFLAQLT 180

Query: 175 FNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE 234
           FNLSL+YTTVTSNTILSS SSLFTFLV+L+FLGEKFTWVKL+SVLLCM GTIIVSLGDSE
Sbjct: 181 FNLSLEYTTVTSNTILSSASSLFTFLVALVFLGEKFTWVKLISVLLCMGGTIIVSLGDSE 240

Query: 235 NSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFN 294
             + +SA A+NPLLGDI +L SA LYAVYITLIRK +PDDDGK+G  SMAQFLGFLGLFN
Sbjct: 241 --TGLSAIATNPLLGDIFALVSAALYAVYITLIRKNIPDDDGKSGQVSMAQFLGFLGLFN 298

Query: 295 LIIFLPVALILHFTKLEPFYRLTLKQF 321
           L+IFLPVALIL+FTKLEPFY LT KQ 
Sbjct: 299 LLIFLPVALILNFTKLEPFYTLTWKQL 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297829256|ref|XP_002882510.1| membrane protein [Arabidopsis lyrata subsp. lyrata] gi|297328350|gb|EFH58769.1| membrane protein [Arabidopsis lyrata subsp. lyrata]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/329 (68%), Positives = 264/329 (80%), Gaps = 11/329 (3%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           M++++W+W LGL+Y+ AVA IWIAASFVVQSVV+AGVSPFL+T+ICNSLFVVY+P+ EIG
Sbjct: 1   MSTKLWRWVLGLMYLFAVATIWIAASFVVQSVVEAGVSPFLITFICNSLFVVYLPLFEIG 60

Query: 61  RYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGE--ESPQSLIVQEGEIGQ 118
           RYL D YGS+LFW++++S  L EL +SEKA+LL +   GVK +  ES   L+V+E EI +
Sbjct: 61  RYLEDAYGSLLFWRSKRS-HLMELVESEKAVLLGQDVSGVKSDATESSSGLVVREEEISE 119

Query: 119 QEKSIDSGSEFVSDEFQSSLPIVEAEESAA------KGRWTRTRVAKVSLLICPFWFLAQ 172
               I+SG E V  E   S+ + +     +      KGRWTR RVAKVSL+ICPFWFLAQ
Sbjct: 120 GGNGIESGLENVELEINGSVNVSDGASGVSNKGLDEKGRWTRMRVAKVSLVICPFWFLAQ 179

Query: 173 LTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD 232
           LTFN+SLKYTTVTSNTILSS SSLFTFLVSL+FLGEKFTW+KL SVLLCM+GTIIVS+GD
Sbjct: 180 LTFNVSLKYTTVTSNTILSSASSLFTFLVSLIFLGEKFTWLKLFSVLLCMSGTIIVSMGD 239

Query: 233 SENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGL 292
           SE++S  +A A NPLLGDILSL SA LYAVYITLIRKKLPDDD +NG  SMAQFLGFLGL
Sbjct: 240 SESNS--NAVAKNPLLGDILSLVSAALYAVYITLIRKKLPDDDERNGRVSMAQFLGFLGL 297

Query: 293 FNLIIFLPVALILHFTKLEPFYRLTLKQF 321
           FN  IFLP ALIL+FTK E F  LTLKQF
Sbjct: 298 FNFFIFLPPALILNFTKRERFNTLTLKQF 326

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231381|ref|NP_187364.1| EamA-like transporter [Arabidopsis thaliana] gi|6642657|gb|AAF20238.1|AC012395_25 putative integral membrane protein [Arabidopsis thaliana] gi|30794019|gb|AAP40456.1| putative integral membrane protein [Arabidopsis thaliana] gi|53749190|gb|AAU90080.1| At3g07080 [Arabidopsis thaliana] gi|332640975|gb|AEE74496.1| EamA-like transporter [Arabidopsis thaliana]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/328 (67%), Positives = 264/328 (80%), Gaps = 10/328 (3%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           M++++W+W LGLIY+ AVA IWIAASFVVQSVV+AGVSPFL+T+ICNSLFVVY+P+ EIG
Sbjct: 1   MSTKLWRWVLGLIYLFAVATIWIAASFVVQSVVEAGVSPFLITFICNSLFVVYLPLFEIG 60

Query: 61  RYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQS-LIVQEGEIGQQ 119
           RYL D YGS+LFW++++S  L EL +SEKA+LL +   GVK + +  S L+V+E EI + 
Sbjct: 61  RYLEDAYGSLLFWRSKRS-HLMELVESEKAVLLGKDVSGVKSDATESSGLVVREQEISEG 119

Query: 120 EKSIDSGSEFVSDEFQSSLPIVEAEESAA------KGRWTRTRVAKVSLLICPFWFLAQL 173
              I+SG E +  E  +S+ + +     +      KGRWTR RVAKVSL+ICPFWFLAQL
Sbjct: 120 GNGIESGLENIELEIDASVNVSDGASGVSNKGLDEKGRWTRMRVAKVSLVICPFWFLAQL 179

Query: 174 TFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDS 233
           TFN+SLKYTTVTSNTILSS SSLFTFLVSL+FLGEKFTW+KL SVLLCM+GTIIVS+GDS
Sbjct: 180 TFNVSLKYTTVTSNTILSSASSLFTFLVSLIFLGEKFTWLKLFSVLLCMSGTIIVSMGDS 239

Query: 234 ENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLF 293
           E+ S  +A A NPLLGDILSL SA LYAVYITLIRKKLPDDD +NG  SMAQFLGFLGLF
Sbjct: 240 ESKS--NAVAKNPLLGDILSLVSAALYAVYITLIRKKLPDDDERNGRVSMAQFLGFLGLF 297

Query: 294 NLIIFLPVALILHFTKLEPFYRLTLKQF 321
           N  IFLP ALIL+FTK E F  LTLKQF
Sbjct: 298 NFFIFLPPALILNFTKRERFNALTLKQF 325

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807016|ref|NP_001242065.1| uncharacterized protein LOC100788015 [Glycine max] gi|255644378|gb|ACU22694.1| unknown [Glycine max]

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 17/329 (5%)

Query: 2   TSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGR 61
            S+ WKWGLGL+YI AVA IWIAASFVVQSVV+AGVSPFLVTYICNSLFVV IPI EIGR
Sbjct: 7   NSKAWKWGLGLVYIFAVATIWIAASFVVQSVVEAGVSPFLVTYICNSLFVVLIPIVEIGR 66

Query: 62  YLVDTYGSVLFWKNRKSGTLQE--LGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQ 119
           YL D+YGS+ FW++ KS    +  +G+SEKAILL++++ G    E+ +SL+++E ++ Q+
Sbjct: 67  YLEDSYGSLWFWRSEKSNPHSKGRVGESEKAILLKDNDAG---NEASESLVLEEVDVIQE 123

Query: 120 EKSIDSGSEFV-SDEF----QSSLPIVE--AEESAAKGRWTRTRVAKVSLLICPFWFLAQ 172
               ++GSE + +D+        + ++E  +     KGRW+R RVAKVSLLICPFWFLAQ
Sbjct: 124 R---NNGSELLPADKVVGVSADQVNVIENISNHLDEKGRWSRCRVAKVSLLICPFWFLAQ 180

Query: 173 LTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD 232
           LTFNLSLKYTTVTSNTILSS SSLFTFLVSL FLGE+FTW+KL SVLLCM GTIIVSLGD
Sbjct: 181 LTFNLSLKYTTVTSNTILSSASSLFTFLVSLAFLGERFTWLKLFSVLLCMTGTIIVSLGD 240

Query: 233 SENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGL 292
           S+  S ++  ASNPLLGDI +LASAGLYAVYITLIRKKLPDDDGK+G+AS AQFLGFLGL
Sbjct: 241 SQ--SGLATVASNPLLGDIFALASAGLYAVYITLIRKKLPDDDGKSGEASTAQFLGFLGL 298

Query: 293 FNLIIFLPVALILHFTKLEPFYRLTLKQF 321
           FN++IFLPVALILHF K E F  LT KQ 
Sbjct: 299 FNVLIFLPVALILHFIKKESFSTLTWKQL 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560175|ref|XP_002521105.1| conserved hypothetical protein [Ricinus communis] gi|223539674|gb|EEF41256.1| conserved hypothetical protein [Ricinus communis]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/323 (68%), Positives = 254/323 (78%), Gaps = 4/323 (1%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           M ++ W W +GLIYI AVA IWIAASFVVQSVVDAGVSPFL+TYICNSLFV+YIP+ EIG
Sbjct: 1   MENKAWGWIVGLIYIFAVAAIWIAASFVVQSVVDAGVSPFLITYICNSLFVIYIPLVEIG 60

Query: 61  RYLVDTYGSVLFWKNRKSGT-LQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQ 119
           RYL D YGS+ FW+   S + LQELG+SE+AILL E+++G K +E   S+ ++E      
Sbjct: 61  RYLEDHYGSLFFWRKTSSTSPLQELGESEQAILLGETDLGAKADELNPSIFIEEVNSSPH 120

Query: 120 EKSIDSGSEFVSDEFQSSLPIVEAEESA-AKGRWTRTRVAKVSLLICPFWFLAQLTFNLS 178
              + +G E +S   Q  LP+ E  +    KGRWTR RVAKVSLLICPFWF AQLTFNLS
Sbjct: 121 GNGVGAGVESMSSTLQRILPVGETGKGVDTKGRWTRARVAKVSLLICPFWFFAQLTFNLS 180

Query: 179 LKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSS 238
           LKYTTVTSNTILS+ SSLFTFLVSL FLGEKFTW+KL SVLLCMAGTIIVSLGDS+N   
Sbjct: 181 LKYTTVTSNTILSTASSLFTFLVSLAFLGEKFTWLKLASVLLCMAGTIIVSLGDSKN--G 238

Query: 239 VSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIF 298
           +SA ASNPLLGD  +L SAGLYA YITLIR K PDDDGK+G  SMAQFLG+LGLFNL +F
Sbjct: 239 ISAVASNPLLGDFFALISAGLYAAYITLIRLKFPDDDGKSGHVSMAQFLGYLGLFNLFLF 298

Query: 299 LPVALILHFTKLEPFYRLTLKQF 321
           LPV L+L+FT LEPF  LT KQF
Sbjct: 299 LPVVLVLNFTMLEPFNMLTRKQF 321

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357505295|ref|XP_003622936.1| Solute carrier family 35 member F5 [Medicago truncatula] gi|355497951|gb|AES79154.1| Solute carrier family 35 member F5 [Medicago truncatula]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/329 (69%), Positives = 260/329 (79%), Gaps = 17/329 (5%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           + S+ WKWGLGLIYI+AVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVV IPI EIG
Sbjct: 7   LDSKAWKWGLGLIYIIAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVLIPIVEIG 66

Query: 61  RYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQE 120
           RYL D+YGS+LFWK+ KS     LG+SE+AILL ++       E  +SL++ E + G  +
Sbjct: 67  RYLEDSYGSLLFWKSDKS-LKGRLGESEQAILLRDNEAS---GEVVESLVIDEVD-GIVD 121

Query: 121 KSIDSGSEFV-SDEFQSSLPI-------VEAEESAAKGRWTRTRVAKVSLLICPFWFLAQ 172
           +  + GSE + SD+    L         V+ +    KGRWTR RVAKVSLLICPFWF AQ
Sbjct: 122 R--NDGSELLPSDDVVGGLVGRVGLVENVDQKGLDEKGRWTRCRVAKVSLLICPFWFFAQ 179

Query: 173 LTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD 232
           LTFNLSLKYTTVTSNTILSS SSLFTFLVSL  LGEKF W+KL SVLLCM GTIIVSLGD
Sbjct: 180 LTFNLSLKYTTVTSNTILSSASSLFTFLVSLALLGEKFAWLKLFSVLLCMGGTIIVSLGD 239

Query: 233 SENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGL 292
           S+  S +   ASNPLLGDI +L+SAGLYAVYITLIRKKL DD+GKNG+ASMAQFLGFLGL
Sbjct: 240 SQ--SGLRTVASNPLLGDIFALSSAGLYAVYITLIRKKLNDDEGKNGEASMAQFLGFLGL 297

Query: 293 FNLIIFLPVALILHFTKLEPFYRLTLKQF 321
           FN+++FLPVALIL+FTK EPFY LT KQ 
Sbjct: 298 FNVLLFLPVALILNFTKAEPFYMLTWKQL 326

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521826|ref|XP_004167930.1| PREDICTED: solute carrier family 35 member F5-like [Cucumis sativus]

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/323 (66%), Positives = 250/323 (77%), Gaps = 16/323 (4%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           M +EVW+WG+GL YI  VA IWIAASFVVQSVVD GVSPFLVTYICNSLFV+YIPI EI 
Sbjct: 1   MKNEVWRWGIGLFYIFLVATIWIAASFVVQSVVDEGVSPFLVTYICNSLFVIYIPIVEIA 60

Query: 61  RYLVDTYGSVLFWKNRKSGTLQELGDS-EKAILLEESNVGVKGEESPQSLIVQEGE--IG 117
           R+L D Y  +LFWKN+K  +LQEL D  E+AILL E+N+    +    S+ +++G+  + 
Sbjct: 61  RFLEDKYEKLLFWKNKKLDSLQELRDEPEQAILLGETNLVTNVDHYSTSMHMEDGKPVLK 120

Query: 118 QQEKSIDSGSEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNL 177
            + + +++G      +               KGRWTR RVAKVSLLICPFWFLAQLTFNL
Sbjct: 121 GESRFLETGCSSYDKQVDE------------KGRWTRIRVAKVSLLICPFWFLAQLTFNL 168

Query: 178 SLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS 237
           SLKYTTVTSNTILSS+SSLFTFLVSL FLGEKFTWVKL SVLLCM GTIIVSLGD ++ +
Sbjct: 169 SLKYTTVTSNTILSSSSSLFTFLVSLAFLGEKFTWVKLASVLLCMGGTIIVSLGDLQSET 228

Query: 238 SVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLII 297
           ++  TASNPLLGD+LSL SAGLYAVYITLIRKKLP+DD  NG ASMAQFLGFLGLFNL I
Sbjct: 229 TLK-TASNPLLGDVLSLVSAGLYAVYITLIRKKLPEDDETNGKASMAQFLGFLGLFNLFI 287

Query: 298 FLPVALILHFTKLEPFYRLTLKQ 320
           FLPVALI+ FT +EPF   T K+
Sbjct: 288 FLPVALIIKFTNMEPFRLRTWKE 310

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453262|ref|XP_004144377.1| PREDICTED: solute carrier family 35 member F5-like [Cucumis sativus]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/323 (66%), Positives = 250/323 (77%), Gaps = 16/323 (4%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           M +EVW+WG+GL YI  VA IWIAASFVVQSVVD GVSPFLVTYICNSLFV+YIPI EI 
Sbjct: 1   MKNEVWRWGIGLFYIFLVATIWIAASFVVQSVVDEGVSPFLVTYICNSLFVIYIPIVEIA 60

Query: 61  RYLVDTYGSVLFWKNRKSGTLQELGDS-EKAILLEESNVGVKGEESPQSLIVQEGE--IG 117
           R+L D Y  +LFWKN+K  +LQEL D  E+AILL E+N+    +    S+ +++G+  + 
Sbjct: 61  RFLEDKYEKLLFWKNKKLDSLQELRDEPEQAILLGETNLVTNVDHYSTSMHMEDGKPILK 120

Query: 118 QQEKSIDSGSEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKVSLLICPFWFLAQLTFNL 177
            + + +++G      +               KGRWTR RVAKVSLLICPFWFLAQLTFNL
Sbjct: 121 GESRFLETGCSSYDKQVDE------------KGRWTRIRVAKVSLLICPFWFLAQLTFNL 168

Query: 178 SLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS 237
           SLKYTTVTSNTILSS+SSLFTFLVSL FLGEKFTWVKL SVLLCM GTIIVSLGD ++ +
Sbjct: 169 SLKYTTVTSNTILSSSSSLFTFLVSLAFLGEKFTWVKLASVLLCMGGTIIVSLGDLQSET 228

Query: 238 SVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLII 297
           ++  TASNPLLGD+LSL SAGLYAVYITLIRKKLP+DD  NG ASMAQFLGFLGLFNL I
Sbjct: 229 TLK-TASNPLLGDVLSLVSAGLYAVYITLIRKKLPEDDETNGKASMAQFLGFLGLFNLFI 287

Query: 298 FLPVALILHFTKLEPFYRLTLKQ 320
           FLPVALI+ FT +EPF   T K+
Sbjct: 288 FLPVALIIKFTNMEPFRLRTWKE 310

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789786|emb|CAN74056.1| hypothetical protein VITISV_001016 [Vitis vinifera]

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/327 (64%), Positives = 248/327 (75%), Gaps = 30/327 (9%)

Query: 1   MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
           M +EVW+W LGLIYIVAVA IWIAAS+VVQSVVDAGVSPFL+TYICNSLFV+YIP+ EIG
Sbjct: 1   MRTEVWRWVLGLIYIVAVASIWIAASYVVQSVVDAGVSPFLITYICNSLFVIYIPLVEIG 60

Query: 61  RYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQE 120
           RYL D+YGS+ FW+++K   LQE+GDSE+ +LL ESN+G +   S Q +I+++GEI Q  
Sbjct: 61  RYLEDSYGSLCFWRSKKDIGLQEIGDSEQVVLLGESNLGARVGGSKQPVILEQGEISQHR 120

Query: 121 KSIDSGSEFVSDEFQSS---LPIVEA---EESAAKGRWTRTRVAKVSLLICPFWFLAQLT 174
             I S  +   + F+++     IV     E+  +KGRWTRTRVAK SLL           
Sbjct: 121 IGIVSELDLKVERFEAASLDQAIVRKDGDEQLDSKGRWTRTRVAKASLL----------- 169

Query: 175 FNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE 234
                      SNTILSS SSLFTFLV+L+FLGEKFTWVKL+SVLLCM GTIIVSLGDSE
Sbjct: 170 -----------SNTILSSASSLFTFLVALVFLGEKFTWVKLISVLLCMGGTIIVSLGDSE 218

Query: 235 NSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFN 294
             + +SA A+NPLLGDI +L SA LYAVYITLIRK +PDDDGK+G  SMAQFLGFLGLFN
Sbjct: 219 --TGLSAIATNPLLGDIFALVSAALYAVYITLIRKNIPDDDGKSGQVSMAQFLGFLGLFN 276

Query: 295 LIIFLPVALILHFTKLEPFYRLTLKQF 321
           L+IFLPVALIL+FTKLEPFY LT KQ 
Sbjct: 277 LLIFLPVALILNFTKLEPFYTLTWKQL 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2098575	438	AT3G07080 "AT3G07080" [Arabido	0.987	0.726	0.518	5.4e-79
MGI|MGI:1921400	524	Slc35f5 "solute carrier family	0.549	0.337	0.288	7.9e-14
RGD|1308125	524	Slc35f5 "solute carrier family	0.549	0.337	0.288	2.9e-13
UNIPROTKB|E2RAG9	524	SLC35F5 "Uncharacterized prote	0.534	0.328	0.271	2.1e-12
UNIPROTKB|F1RY25	524	SLC35F5 "Uncharacterized prote	0.534	0.328	0.271	7e-12
UNIPROTKB|B8ZZY4	517	SLC35F5 "Solute carrier family	0.534	0.332	0.278	8e-11
UNIPROTKB|Q8WV83	523	SLC35F5 "Solute carrier family	0.534	0.328	0.278	8.4e-11
UNIPROTKB|A6QL92	524	SLC35F5 "Solute carrier family	0.534	0.328	0.266	1.2e-10
TAIR|locus:2116657	394	AT4G32140 "AT4G32140" [Arabido	0.801	0.654	0.242	2.8e-10
UNIPROTKB|F1NEN4	482	SLC35F5 "Uncharacterized prote	0.515	0.344	0.264	1.2e-09

TAIR|locus:2098575 AT3G07080 "AT3G07080" [Arabidopsis thaliana (taxid:3702)]

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 170/328 (51%), Positives = 207/328 (63%)

Query:     1 MTSEVWKWGLGLIYXXXXXXXXXXXXXXXQSVVDAGVSPFLVTYICNSLFVVYIPIAEIG 60
             M++++W+W LGLIY               QSVV+AGVSPFL+T+ICNSLFVVY+P+ EIG
Sbjct:     1 MSTKLWRWVLGLIYLFAVATIWIAASFVVQSVVEAGVSPFLITFICNSLFVVYLPLFEIG 60

Query:    61 RYLVDTYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESPQS-LIVQEGEIGQQ 119
             RYL D YGS+LFW++++S  L EL +SEKA+LL +   GVK + +  S L+V+E EI + 
Sbjct:    61 RYLEDAYGSLLFWRSKRSH-LMELVESEKAVLLGKDVSGVKSDATESSGLVVREQEISEG 119

Query:   120 EKSIDSGSEFVSDEFQSSLPIVEAEESAA------KGRWTRTRVAKVSLLICPFWFLAQL 173
                I+SG E +  E  +S+ + +     +      KGRWTR RVAKVSL+ICPFWFLAQL
Sbjct:   120 GNGIESGLENIELEIDASVNVSDGASGVSNKGLDEKGRWTRMRVAKVSLVICPFWFLAQL 179

Query:   174 TFNLSLKYXXXXXXXXXXXXXXXXXXXXXXXXXGEKFTWVKLVSVLLCMAGTIIVSLGDX 233
             TFN+SLKY                         GEKFTW+KL SVLLCM+GTIIVS+GD 
Sbjct:   180 TFNVSLKYTTVTSNTILSSASSLFTFLVSLIFLGEKFTWLKLFSVLLCMSGTIIVSMGDS 239

Query:   234 XXXXXXXXXXXXPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQXXXXXXXX 293
                         PLLGDILSL SA LYAVYITLIRKKLPDDD +NG  SMAQ        
Sbjct:   240 ESKSNAVAKN--PLLGDILSLVSAALYAVYITLIRKKLPDDDERNGRVSMAQFLGFLGLF 297

Query:   294 XXXXXXPVALILHFTKLEPFYRLTLKQF 321
                   P ALIL+FTK E F  LTLKQF
Sbjct:   298 NFFIFLPPALILNFTKRERFNALTLKQF 325

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0006007 "glucose catabolic process" evidence=RCA

MGI|MGI:1921400 Slc35f5 "solute carrier family 35, member F5" [Mus musculus (taxid:10090)]

 Score = 183 (69.5 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
 Identities = 56/194 (28%), Positives = 91/194 (46%)

Query:    87 SEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEES 146
             SEK   LE +N+G   E++P+   V+   I  + + + S     +   + S P V+ +ES
Sbjct:   175 SEK---LESTNIGT--EKTPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPTVKDQES 228

Query:   147 AAK--GRWTRTRVAKVSLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXX 201
               K  G+ T T+VAK+S   C  WFLA L++  +L   +                     
Sbjct:   229 ILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAV 288

Query:   202 XXXXXGEKFTWVKLVSVLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYA 261
                  G++FT  KL++V+L + G ++V+L                 +G I SLA A  YA
Sbjct:   289 FPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDT------IGSIWSLAGAMFYA 342

Query:   262 VYITLIRKKLPDDD 275
             VYI +I++K+  +D
Sbjct:   343 VYIVMIKRKVDRED 356

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1308125 Slc35f5 "solute carrier family 35, member F5" [Rattus norvegicus (taxid:10116)]

 Score = 181 (68.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
 Identities = 56/194 (28%), Positives = 90/194 (46%)

Query:    87 SEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEES 146
             SEK   LE +N+G   E+ P+   V+   I  + + + S     +   + S P V+ +ES
Sbjct:   175 SEK---LESTNIGT--EKPPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPTVKDQES 228

Query:   147 AAK--GRWTRTRVAKVSLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXX 201
               K  G+ T T+VAK+S   C  WFLA L++  +L   +                     
Sbjct:   229 ILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAV 288

Query:   202 XXXXXGEKFTWVKLVSVLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYA 261
                  G++FT  KL++V+L + G ++V+L                 +G I SLA A  YA
Sbjct:   289 FPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDT------IGSIWSLAGAMFYA 342

Query:   262 VYITLIRKKLPDDD 275
             VYI +I++K+  +D
Sbjct:   343 VYIVMIKRKVDRED 356

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E2RAG9 SLC35F5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 177 (67.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
 Identities = 50/184 (27%), Positives = 84/184 (45%)

Query:    97 NVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GRWTR 154
             N  +  E++P+   V+   I  + + + S     +   + S P V+ +ES  K  G+ T 
Sbjct:   180 NTNIDAEKTPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPTVKEQESLLKTVGKLTT 238

Query:   155 TRVAKVSLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXXXXXXXGEKFT 211
             T+VAK+S   C  WFLA L++  +L   +                          G++FT
Sbjct:   239 TQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFT 298

Query:   212 WVKLVSVLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYAVYITLIRKKL 271
               KL++V+L + G ++V+L                 +G I SL  A LYAVYI +I++K+
Sbjct:   299 LSKLLAVILSIGGVVLVNLSGSEKSAGRDT------IGSIWSLVGAMLYAVYIVMIKRKV 352

Query:   272 PDDD 275
               +D
Sbjct:   353 DRED 356

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1RY25 SLC35F5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 174 (66.3 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
 Identities = 50/184 (27%), Positives = 84/184 (45%)

Query:    97 NVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GRWTR 154
             N  +  E++P+   V+   I  + + + S     +   + S P V+ +ES  K  G+ T 
Sbjct:   180 NTNIDTEKAPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPTVKEQESLFKTVGKLTA 238

Query:   155 TRVAKVSLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXXXXXXXGEKFT 211
             T+VAK+S   C  WFLA L++  +L   +                          G++FT
Sbjct:   239 TQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFT 298

Query:   212 WVKLVSVLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYAVYITLIRKKL 271
               KL++V+L + G ++V+L                 +G I SL  A LYAVYI +I++K+
Sbjct:   299 LSKLLAVILSIGGVVLVNLSGSEKSAGRDT------IGSIWSLVGAMLYAVYIVMIKRKV 352

Query:   272 PDDD 275
               +D
Sbjct:   353 DRED 356

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|B8ZZY4 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
 Identities = 52/187 (27%), Positives = 87/187 (46%)

Query:    94 EESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GR 151
             E +N+    E++P+   V+   I  + + + S     +   + S P+ E +ES  K  G+
Sbjct:   173 ESTNIDT--EKTPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPVKE-QESILKTVGK 228

Query:   152 WTRTRVAKVSLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXXXXXXXGE 208
              T T+VAK+S   C  WFLA L++  +L   +                          G+
Sbjct:   229 LTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGD 288

Query:   209 KFTWVKLVSVLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYAVYITLIR 268
             +FT  KL++V+L + G ++V+L                 +G I SLA A LYAVYI +I+
Sbjct:   289 RFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDT------VGSIWSLAGAMLYAVYIVMIK 342

Query:   269 KKLPDDD 275
             +K+  +D
Sbjct:   343 RKVDRED 349

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q8WV83 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
 Identities = 52/187 (27%), Positives = 87/187 (46%)

Query:    94 EESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GR 151
             E +N+    E++P+   V+   I  + + + S     +   + S P+ E +ES  K  G+
Sbjct:   179 ESTNIDT--EKTPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPVKE-QESILKTVGK 234

Query:   152 WTRTRVAKVSLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXXXXXXXGE 208
              T T+VAK+S   C  WFLA L++  +L   +                          G+
Sbjct:   235 LTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGD 294

Query:   209 KFTWVKLVSVLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYAVYITLIR 268
             +FT  KL++V+L + G ++V+L                 +G I SLA A LYAVYI +I+
Sbjct:   295 RFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDT------VGSIWSLAGAMLYAVYIVMIK 348

Query:   269 KKLPDDD 275
             +K+  +D
Sbjct:   349 RKVDRED 355

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A6QL92 SLC35F5 "Solute carrier family 35 member F5" [Bos taurus (taxid:9913)]

 Score = 166 (63.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
 Identities = 49/184 (26%), Positives = 82/184 (44%)

Query:    97 NVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GRWTR 154
             N  +  E+ P+   V+   I  + + + S     +   + S P V+ +ES  K  G+ T 
Sbjct:   180 NTNIDTEKIPKKSRVRFSNI-MEIRQLPSSHALEAKLSRMSYPTVKEQESLLKTVGKLTA 238

Query:   155 TRVAKVSLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXXXXXXXGEKFT 211
             T+VAK+S   C  WFLA  ++  +L   +                          G++FT
Sbjct:   239 TQVAKISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNSGDRFT 298

Query:   212 WVKLVSVLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYAVYITLIRKKL 271
               KL++V+L + G ++V+L                 +G I SL  A LYAVYI +I++K+
Sbjct:   299 LSKLLAVILSIGGVVLVNLSGSEKSPGRNT------IGSIWSLVGAMLYAVYIVMIKRKV 352

Query:   272 PDDD 275
               +D
Sbjct:   353 DRED 356

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

TAIR|locus:2116657 AT4G32140 "AT4G32140" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 69/285 (24%), Positives = 110/285 (38%)

Query:     6 WKWGLGLIYXXXXXXXXXXXXXXXQSVVDAGVSPFLVTYICNSLFVVYIPIAEIGRYLVD 65
             W++  GL                 Q +  A   PF VTY+  SL +VY+P+A    +L D
Sbjct:     3 WRYKAGLFLIGTVVIIWVTSAEVTQDIFTAYKQPFAVTYLGASLMIVYLPVA----FLKD 58

Query:    66 TYGSVLFWKNRKSGTLQELGDSEKAILLEESNVGVKGEESP-QSLIVQEGEIGQQEKSID 124
                  L  ++ KS  +  L D        +S+V + G  SP +  I++ G  G   K  D
Sbjct:    59 WLCRYLDRRSSKSNKIPALTD--------DSSVEL-G--SPLRHKIIEMGLQGTITKK-D 106

Query:   125 SGSEFVSDEFQSSLPI---VEAEESAAKGRW--TRTRVAKVSLLICPFWFLAQLTFNLSL 179
             S     S E +   P+   V  E    K R   T  ++A   L + P WF+ +   N +L
Sbjct:   107 SEEHLSSHEEEDERPLIGKVREEVQTLKQRKEITTKQIAMYGLYLAPIWFVTEYLSNAAL 166

Query:   180 KYXXXXXXXXXXXXXXXXXXXXXXXXXGEKFTWVKLVSVLLCMAGTIIVSLGDXXXXXXX 239
                                         +     K+V+V + MAG ++ +LG        
Sbjct:   167 ARTSVASTTVLSSTSGLFTLFIGVFLGQDTLNLSKVVAVFVSMAGVVMTTLGKTWASDES 226

Query:   240 XXXXXX----PLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGD 280
                        L+GD+  L SA  Y ++ T++ KK   ++G+  D
Sbjct:   227 QLNSSLNGERSLMGDLFGLLSAVSYGLF-TVLLKKFAGEEGEGVD 270

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1NEN4 SLC35F5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 158 (60.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 47/178 (26%), Positives = 80/178 (44%)

Query:   103 EESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAK--GRWTRTRVAKV 160
             E++P+   V+   I  + + + S     +   + S P V+ +ES  K  G+ T T+VAK+
Sbjct:   142 EKTPKKPRVRFSNI-MEIRQLPSSHALEAKLSRMSYPAVKEQESILKTVGKLTATQVAKI 200

Query:   161 SLLICPFWFLAQLTFNLSL---KYXXXXXXXXXXXXXXXXXXXXXXXXXGEKFTWVKLVS 217
             S   C  WFLA  ++  +L   +                          G++FT  KL++
Sbjct:   201 SFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLA 260

Query:   218 VLLCMAGTIIVSLGDXXXXXXXXXXXXXPLLGDILSLASAGLYAVYITLIRKKLPDDD 275
             V L + G ++V+L                 +G + SL  A LYAVYI +I++K+  +D
Sbjct:   261 VFLSIGGVVLVNLSGSEKSPGRDT------IGSLWSLVGAMLYAVYIVMIKRKVDRED 312

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	322
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	2e-09
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	2e-06
pfam00892	126	pfam00892, EamA, EamA-like transporter family	3e-06
PRK11689	295	PRK11689, PRK11689, aromatic amino acid exporter;	9e-04
pfam08449	303	pfam08449, UAA, UAA transporter family	0.001

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 14/121 (11%)

Query: 180 KYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSV 239
           +YT +TS  +L   +     ++S  FL  ++    ++ V++C+ G + V   D   +   
Sbjct: 102 QYTNLTSVQLLDCWAIPVVLVLSWFFLKVRYRASHILGVVICILGVVCVVGSDV-LAGRR 160

Query: 240 SATASNPLLGDILSLASAGLYAVYITL---IRKKLPDDDGKNGDASMAQFLGFLGLFNLI 296
           +   SNP+LGDIL LA A LYAV       + KKL          S  +FLG LGLF  I
Sbjct: 161 AYGGSNPVLGDILVLAGATLYAVSNVTEEFLVKKL----------SRTEFLGMLGLFGAI 210

Query: 297 I 297
           I
Sbjct: 211 I 211

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 15/169 (8%)

Query: 151 RWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVS-LLFLGEK 209
           R        + LL      L  L   L+LKYT+ +  +++     LFT L++ LL LGE+
Sbjct: 63  RPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGER 122

Query: 210 FTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRK 269
            + ++++ +LL +AG +++ LG               LLG +L+LA+A L+A+Y  L+++
Sbjct: 123 LSLLQILGILLALAGVLLILLGGGGGGIL-------SLLGLLLALAAALLWALYTALVKR 175

Query: 270 KLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYRLTL 318
                        +   L    L  L++ L   L      +     L L
Sbjct: 176 LSRLG-------PVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLL 217

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 20/62 (32%), Positives = 41/62 (66%)

Query: 169 FLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIV 228
            L  L +  +LKY + ++ ++++S S +FT ++S+L LGEK T  +L+ ++L + G +++
Sbjct: 65  ALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLI 124

Query: 229 SL 230
            L
Sbjct: 125 LL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|183277 PRK11689, PRK11689, aromatic amino acid exporter; Provisional

 Score = 40.2 bits (95), Expect = 9e-04
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 197 FTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSS--VSATASNPLLGDILSL 254
            T L ++LF G+K  W+ +  +LL +AG   V  GD+  S +  ++  ASNP L   L+ 
Sbjct: 104 LTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNP-LSYGLAF 162

Query: 255 ASAGLYAVYITLIRKKLPDDDGKNG 279
             A ++A Y  + RK      GKNG
Sbjct: 163 IGAFIWAAYCNVTRKY---ARGKNG 184

Length = 295

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 19/77 (24%), Positives = 41/77 (53%)

Query: 176 NLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSEN 235
           N +LKY +  ++ I  S   +   ++ +L  G++++ ++ +S LL   G II +L  +++
Sbjct: 82  NEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKD 141

Query: 236 SSSVSATASNPLLGDIL 252
           S +   T  +  +G  L
Sbjct: 142 SKNSKLTTFSDNVGIAL 158

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	322
KOG2765	416	consensus Predicted membrane protein [Function unk	100.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.85
PRK11272	292	putative DMT superfamily transporter inner membran	99.66
PLN00411	358	nodulin MtN21 family protein; Provisional	99.65
PRK15430	296	putative chloramphenical resistance permease RarD;	99.64
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.64
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.64
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.61
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.6
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.59
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.57
PRK11689	295	aromatic amino acid exporter; Provisional	99.55
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.5
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.43
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.37
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.27
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.26
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.24
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.2
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.15
KOG2766	336	consensus Predicted membrane protein [Function unk	99.12
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.07
COG2962	293	RarD Predicted permeases [General function predict	98.85
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.8
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.75
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.72
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	98.65
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.65
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.62
COG2510	140	Predicted membrane protein [Function unknown]	98.6
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.46
PLN00411	358	nodulin MtN21 family protein; Provisional	98.46
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.45
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.41
PRK11689	295	aromatic amino acid exporter; Provisional	98.39
PRK11272	292	putative DMT superfamily transporter inner membran	98.26
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.19
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.1
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.08
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.04
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.99
PRK15430	296	putative chloramphenical resistance permease RarD;	97.83
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	97.82
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.8
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.79
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.78
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.76
COG2076	106	EmrE Membrane transporters of cations and cationic	97.76
PRK11431	105	multidrug efflux system protein; Provisional	97.72
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	97.65
KOG1581	327	consensus UDP-galactose transporter related protei	97.6
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.53
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.39
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.33
KOG1580	337	consensus UDP-galactose transporter related protei	97.15
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.14
PRK13499	345	rhamnose-proton symporter; Provisional	97.0
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.55
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.5
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.44
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.16
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.08
KOG1582	367	consensus UDP-galactose transporter related protei	96.0
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	95.69
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.53
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.35
COG2962	293	RarD Predicted permeases [General function predict	95.33
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.94
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	94.93
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	94.31
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	93.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	93.17
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	92.7
KOG1580	337	consensus UDP-galactose transporter related protei	92.56
KOG2765	416	consensus Predicted membrane protein [Function unk	91.83
KOG4510	346	consensus Permease of the drug/metabolite transpor	91.11
PRK13499	345	rhamnose-proton symporter; Provisional	90.83
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	88.31
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	87.83
PRK02237	109	hypothetical protein; Provisional	85.23
KOG1581	327	consensus UDP-galactose transporter related protei	84.41
PRK10666	428	ammonium transporter; Provisional	82.21
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	82.15
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	82.1
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	80.69
KOG1443	349	consensus Predicted integral membrane protein [Fun	80.54
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	80.42

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=4.9e-42  Score=312.64  Aligned_cols=302  Identities=36%  Similarity=0.589  Sum_probs=217.9

Q ss_pred             CcchhhHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCC--cceEEEEeccceehhhhhhHhhhhHHHhhcccceeecccCc
Q 042323            1 MTSEVWKWGLGLIYIVAVAIIWIAASFVVQSVVDAGV--SPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKS   78 (322)
Q Consensus         1 ~~~~~~~~~lG~~~~~~v~v~Wv~ss~l~~~l~~~~~--~Pf~~t~~~~s~f~l~lp~~~~~~~~~~~~~~~~~~~~~~~   78 (322)
                      |..+++||.+|++++++|+++||+||+++|++|++++  ||||+||+|+++|++|+|.+.+...    .+....||.+++
T Consensus         5 ~~~~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~----~~~~~~~R~~~~   80 (416)
T KOG2765|consen    5 GFTKRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDA----PWRILETRSKRS   80 (416)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcc----hhhhhhhhcccc
Confidence            4567889999999999999999999999999998875  9999999999999999987653111    111112343332


Q ss_pred             CcccccCchhhhhhhhccCCC----CCCCC--CCCcccccccc--ccccccccCCCCcccccccccCCchhhhhhhhhcC
Q 042323           79 GTLQELGDSEKAILLEESNVG----VKGEE--SPQSLIVQEGE--IGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAKG  150 (322)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (322)
                      .... .     .....+.+.+    .++.+  .+.++..|+..  .++++ .++++..+.+..  .+.+....+.-+.++
T Consensus        81 ~~~~-~-----~e~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~-~~~~~s~~~e~~--~~~~~~~rs~l~~~~  151 (416)
T KOG2765|consen   81 NHAI-M-----EEADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGE-EEKPESTNLEVR--EKANTKKRSNLKERG  151 (416)
T ss_pred             chhh-h-----hhhhhhccccccccccccccccCCceeeecccccccccc-ccCCCCcccccc--ccCCcccccchhhhh
Confidence            1110 0     0000111111    11111  11222222211  00000 000011110000  000000001124456


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          151 RWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       151 ~l~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      +++.++..+.++.+|.+|+++|+.++.|+.+++++..+++.+++.+||.+++.++..||+++.|.+++++++.||+++..
T Consensus       152 ~~t~~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~  231 (416)
T KOG2765|consen  152 KLTATQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTM  231 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEe
Confidence            78889999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 042323          231 GDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKL  310 (322)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~~~  310 (322)
                      ++..+.  ++....++..|++++++||+.||+|.++.||..++++   .++|...++|++++++.+++||..+++++.+.
T Consensus       232 ~~s~~~--~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg---~rvdi~lffGfvGLfnllllwP~l~iL~~~~~  306 (416)
T KOG2765|consen  232 GDSKQN--SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEG---ERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE  306 (416)
T ss_pred             cccccc--ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhccccc---ccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc
Confidence            876543  3344566789999999999999999999999887762   28999999999999999999999999999999


Q ss_pred             ccccCccccc
Q 042323          311 EPFYRLTLKQ  320 (322)
Q Consensus       311 ~~~~~~~~~~  320 (322)
                      |.|+.|...+
T Consensus       307 e~F~lP~~~q  316 (416)
T KOG2765|consen  307 ERFELPSSTQ  316 (416)
T ss_pred             CcccCCCCce
Confidence            9999987654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.85  E-value=3.1e-20  Score=173.04  Aligned_cols=153  Identities=35%  Similarity=0.529  Sum_probs=136.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCC
Q 042323          156 RVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSEN  235 (322)
Q Consensus       156 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~  235 (322)
                      +.+|..++.+++...+|++.+.|++||+.+.++++.+++-+|+++++++++|+|+++.+++|++++++|++++...|...
T Consensus        77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~  156 (334)
T PF06027_consen   77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS  156 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence            34566778899999999999999999999999999999999999999999999999999999999999999988877654


Q ss_pred             CcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhccCcccccC
Q 042323          236 SSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYR  315 (322)
Q Consensus       236 ~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~~~~~~~~  315 (322)
                      + +++....+++.||+++++||++||+++++.++.++       +.+...+.++.++++.++..+...++|..++++++|
T Consensus       157 ~-~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~-------~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w  228 (334)
T PF06027_consen  157 G-SDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVK-------KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHW  228 (334)
T ss_pred             c-ccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcc-------cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCC
Confidence            3 12234567899999999999999999999999887       356788999999999999999999999999998877


Q ss_pred             c
Q 042323          316 L  316 (322)
Q Consensus       316 ~  316 (322)
                      .
T Consensus       229 ~  229 (334)
T PF06027_consen  229 T  229 (334)
T ss_pred             C
Confidence            5

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.66  E-value=4.1e-15  Score=137.64  Aligned_cols=122  Identities=16%  Similarity=0.137  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHh-cccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCcccccCCC
Q 042323          166 PFWFLAQLTFNLSL-KYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATAS  244 (322)
Q Consensus       166 ~~~~~~~~~~~~al-~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~~~~~~  244 (322)
                      +....++.+++++. ++++++.++++.++.|+++.+++++ +|||+++++++|++++++|+.++..++..         .
T Consensus        77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~---------~  146 (292)
T PRK11272         77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL---------S  146 (292)
T ss_pred             HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc---------c
Confidence            33556778889999 9999999999999999999999986 69999999999999999999987543211         1


Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042323          245 NPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALIL  305 (322)
Q Consensus       245 ~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~  305 (322)
                      ....|++++++|+++||.|.+..||..+       + ++...+.++..++++.+.+.....
T Consensus       147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~  199 (292)
T PRK11272        147 GNPWGAILILIASASWAFGSVWSSRLPL-------P-VGMMAGAAEMLAAGVVLLIASLLS  199 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCC-------C-cchHHHHHHHHHHHHHHHHHHHHc
Confidence            2347999999999999999999998532       1 223455677788877777766543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.65  E-value=4.8e-15  Score=140.56  Aligned_cols=141  Identities=17%  Similarity=0.261  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHH------hcCcccHHHHHHHHHHHHhhheeecC
Q 042323          158 AKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLF------LGEKFTWVKLVSVLLCMAGTIIVSLG  231 (322)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~------l~er~s~~~~~gv~l~~~Gv~lv~~~  231 (322)
                      .+..+ .+++.++.+.++++|++|++++.++++.+++|+|++++++++      ++||+++++++|++++++|++++...
T Consensus        79 ~~l~l-~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~  157 (358)
T PLN00411         79 SKIGL-LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFY  157 (358)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHc
Confidence            33333 343335677789999999999999999999999999999999      69999999999999999999977643


Q ss_pred             CCCC--------------Ccc-cccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 042323          232 DSEN--------------SSS-VSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLI  296 (322)
Q Consensus       232 ~~~~--------------~~~-~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l  296 (322)
                      +...              ... ......+...|++++++|+++||+|+++.|+..++.      -+....++++++++.+
T Consensus       158 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~------~~~~~~t~~~~~~~~~  231 (358)
T PLN00411        158 HGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY------PAAFTVSFLYTVCVSI  231 (358)
T ss_pred             cCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CcHhHHHHHHHHHHHH
Confidence            2210              000 001112235699999999999999999999865532      1334556677777766


Q ss_pred             HHHHHHHHH
Q 042323          297 IFLPVALIL  305 (322)
Q Consensus       297 ~~~p~~~~~  305 (322)
                      .+.+.....
T Consensus       232 ~~~~~~l~~  240 (358)
T PLN00411        232 VTSMIGLVV  240 (358)
T ss_pred             HHHHHHHHH
Confidence            665555543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.64  E-value=4e-15  Score=137.97  Aligned_cols=98  Identities=18%  Similarity=0.241  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCccc
Q 042323          160 VSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSV  239 (322)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~  239 (322)
                      ..+.++++.++++.++++|++++++++++++.++.|+++.+++++++|||+++++|+|++++++|++++..+++      
T Consensus        75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~------  148 (296)
T PRK15430         75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG------  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC------
Confidence            34456666788899999999999999999999999999999999999999999999999999999998764321      


Q ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 042323          240 SATASNPLLGDILSLASAGLYAVYITLIRKKL  271 (322)
Q Consensus       240 ~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~  271 (322)
                          ..    .+++++++++||.|.++.|+..
T Consensus       149 ----~~----~~~~l~aa~~~a~~~i~~r~~~  172 (296)
T PRK15430        149 ----SL----PIIALGLAFSFAFYGLVRKKIA  172 (296)
T ss_pred             ----Cc----cHHHHHHHHHHHHHHHHHHhcC
Confidence                11    1468889999999999998853

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.64  E-value=7.3e-15  Score=136.49  Aligned_cols=137  Identities=18%  Similarity=0.292  Sum_probs=115.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCC
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE  234 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~  234 (322)
                      ++.++..+..+++.+++..+.++|++|++++.++++.+++|+|+++++++++|||+++++++|++++++|+++....+. 
T Consensus        62 ~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~-  140 (302)
T TIGR00817        62 SALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL-  140 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc-
Confidence            3455666677777788889999999999999999999999999999999999999999999999999999986542221 


Q ss_pred             CCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          235 NSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       235 ~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                               .....|++++++|+++||+|.++.||..+++     +.++..++.++..++++++.|+....+
T Consensus       141 ---------~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~-----~~~~~~~~~~~~~~~~~~l~p~~~~~~  198 (302)
T TIGR00817       141 ---------SFNWAGFLSAMISNITFVSRNIFSKKAMTIK-----SLDKTNLYAYISIMSLFLLSPPAFITE  198 (302)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHHHHHHHhhccC-----CCCcccHHHHHHHHHHHHHHHHHHHHc
Confidence                     2245799999999999999999999965532     467888889999999999999887654

specificities overlap.

>TIGR00688 rarD rarD protein

Probab=99.64  E-value=3.4e-15  Score=135.42  Aligned_cols=101  Identities=15%  Similarity=0.119  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCC
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENS  236 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~  236 (322)
                      .+......+++.++++.++++|++++++++++++.++.|+|+++++++++|||++++++++++++++|++++..++.   
T Consensus        69 ~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~---  145 (256)
T TIGR00688        69 LILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG---  145 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC---
Confidence            34455667777888999999999999999999999999999999999999999999999999999999998764321   


Q ss_pred             cccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 042323          237 SSVSATASNPLLGDILSLASAGLYAVYITLIRKKL  271 (322)
Q Consensus       237 ~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~  271 (322)
                             ...    .++++++++||.|.+..|+..
T Consensus       146 -------~~~----~~~l~aa~~~a~~~i~~~~~~  169 (256)
T TIGR00688       146 -------SLP----WEALVLAFSFTAYGLIRKALK  169 (256)
T ss_pred             -------Cch----HHHHHHHHHHHHHHHHHhhcC
Confidence                   111    467899999999999999853

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.61  E-value=2.4e-14  Score=129.71  Aligned_cols=137  Identities=22%  Similarity=0.284  Sum_probs=110.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCC
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE  234 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~  234 (322)
                      ++..+....+++...+++.++++|++|+++++++++.++.|+++++++++++|||+++++++|++++++|++++..++..
T Consensus        44 ~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~  123 (260)
T TIGR00950        44 KRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL  123 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc
Confidence            34445555666667889999999999999999999999999999999999999999999999999999999987654321


Q ss_pred             CCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042323          235 NSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALIL  305 (322)
Q Consensus       235 ~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~  305 (322)
                               .....|++++++++++|+.+.++.|+..++.     +.++.....+...++.++++|.....
T Consensus       124 ---------~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~  180 (260)
T TIGR00950       124 ---------SINPAGLLLGLGSGISFALGTVLYKRLVKKE-----GPELLQFTGWVLLLGALLLLPFAWFL  180 (260)
T ss_pred             ---------cccHHHHHHHHHHHHHHHHHHHHHhHHhhcC-----CchHHHHHHHHHHHHHHHHHHHHHhc
Confidence                     2346899999999999999999999965422     22344555567778888887776654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.60  E-value=4.1e-14  Score=134.19  Aligned_cols=140  Identities=16%  Similarity=0.213  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCC
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENS  236 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~  236 (322)
                      .++..+..+++....+...+.|+++++++.++++.++.|+|+++++++++|||++++++++++++++|+++....+.   
T Consensus       113 ~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---  189 (350)
T PTZ00343        113 FLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---  189 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---
Confidence            44555566666555566677999999999999999999999999999999999999999999999999998875332   


Q ss_pred             cccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          237 SSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       237 ~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                             ..++.|++++++|+++||+|+++.|+..++.+....+.++.....++.++++++++|+..+.+
T Consensus       190 -------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e  252 (350)
T PTZ00343        190 -------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE  252 (350)
T ss_pred             -------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                   124689999999999999999999997654321111356777777788899999999887654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.59  E-value=5e-14  Score=130.81  Aligned_cols=121  Identities=16%  Similarity=0.272  Sum_probs=91.2

Q ss_pred             HHHHHHHHHHhcc-cchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCcccccCCCCCh
Q 042323          169 FLAQLTFNLSLKY-TTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPL  247 (322)
Q Consensus       169 ~~~~~~~~~al~~-~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~  247 (322)
                      .....+++.+++| .+++.++++.+++|+++.+++++++|||+++++++|++++++|+.++..++....       ..+.
T Consensus        70 ~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~-------~~~~  142 (299)
T PRK11453         70 FGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQ-------HVAM  142 (299)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCc-------chhH
Confidence            3445577889988 5889999999999999999999999999999999999999999998875432211       2235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 042323          248 LGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLP  300 (322)
Q Consensus       248 ~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p  300 (322)
                      .|++++++++++||+|.++.|+..++.+    .........++++.+.+...+
T Consensus       143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  191 (299)
T PRK11453        143 LGFMLTLAAAFSWACGNIFNKKIMSHST----RPAVMSLVVWSALIPIIPFFV  191 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccC----ccchhHHHHHHHHHHHHHHHH
Confidence            7999999999999999999999644321    223334444555554443333

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.57  E-value=4.9e-15  Score=125.32  Aligned_cols=154  Identities=24%  Similarity=0.427  Sum_probs=129.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCC
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE  234 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~  234 (322)
                      |..+.....+.++|.++|+.|..|++.+++++++.+.++...|+.+++++.+++|+...+++++++++.|++++...|..
T Consensus        50 k~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~  129 (290)
T KOG4314|consen   50 KLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE  129 (290)
T ss_pred             eeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence            33344445566779999999999999999999999999999999999999999999999999999999999999977765


Q ss_pred             CCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhccCccc--
Q 042323          235 NSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEP--  312 (322)
Q Consensus       235 ~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~~~~~--  312 (322)
                      .        .+.+.|+..+++||..-|+|.++.|+.+++.+    --+...++...+.++..+.+...+++.++++|.  
T Consensus       130 ~--------a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn----~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~q  197 (290)
T KOG4314|consen  130 H--------ADEIIGIACAVGSAFMAALYKVLFKMFIGNAN----FGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQ  197 (290)
T ss_pred             h--------hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc----chhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHH
Confidence            4        35789999999999999999999999887654    345677777778888888887777888887775  


Q ss_pred             -ccCccccc
Q 042323          313 -FYRLTLKQ  320 (322)
Q Consensus       313 -~~~~~~~~  320 (322)
                       |...+|+-
T Consensus       198 sFA~~PWG~  206 (290)
T KOG4314|consen  198 SFAAAPWGC  206 (290)
T ss_pred             HHhhCCchh
Confidence             44566653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.55  E-value=9e-14  Score=128.87  Aligned_cols=111  Identities=23%  Similarity=0.271  Sum_probs=85.2

Q ss_pred             HHHHHHHHHHHHHHHHHhc----ccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCc
Q 042323          162 LLICPFWFLAQLTFNLSLK----YTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS  237 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~----~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~  237 (322)
                      +.+++..++++.+++.|++    +++++.++++.++.|+++.+++++++|||+++++++|++++++|++++..++.....
T Consensus        65 ~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~  144 (295)
T PRK11689         65 LAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSL  144 (295)
T ss_pred             HHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchh
Confidence            3444455666677777765    467788999999999999999999999999999999999999999988765431110


Q ss_pred             ccc-cCCCCChHHHHHHHHHHHHHHHHHHHHhhhCC
Q 042323          238 SVS-ATASNPLLGDILSLASAGLYAVYITLIRKKLP  272 (322)
Q Consensus       238 ~~~-~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~  272 (322)
                      .+. ....+...|++++++|+++||+|.++.||..+
T Consensus       145 ~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~  180 (295)
T PRK11689        145 AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYAR  180 (295)
T ss_pred             hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            000 00112357999999999999999999999644

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.50  E-value=7.7e-13  Score=122.51  Aligned_cols=125  Identities=21%  Similarity=0.193  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCccc
Q 042323          160 VSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSV  239 (322)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~  239 (322)
                      ..+..+++.+..+.++++|++|++++.++++.++.|+++.+++    +|++..  +.++.++++|+.++..++.+..   
T Consensus        73 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~---  143 (293)
T PRK10532         73 PLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVS---  143 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcc---
Confidence            3445555677788899999999999999999999999999887    356554  4567788999998764332211   


Q ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042323          240 SATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALIL  305 (322)
Q Consensus       240 ~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~  305 (322)
                          ..+..|++++++++++||.|.++.|+..++       .++... .++.+++++++.|+....
T Consensus       144 ----~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~-------~~~~~~-~~~~~~~~~~l~~~~~~~  197 (293)
T PRK10532        144 ----HVDLTGAALALGAGACWAIYILSGQRAGAE-------HGPATV-AIGSLIAALIFVPIGALQ  197 (293)
T ss_pred             ----cCChHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCchHH-HHHHHHHHHHHHHHHHHc
Confidence                224579999999999999999999996542       344444 456677777777766543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.43  E-value=2.5e-12  Score=118.34  Aligned_cols=107  Identities=16%  Similarity=0.107  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCC
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE  234 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~  234 (322)
                      ++.+...+..+.....++.+++.|+++++++.++.+.++.|+++.+++++++|||+++++|+|++++++|++++..++..
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~  139 (281)
T TIGR03340        60 ATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA  139 (281)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc
Confidence            34455666677778889999999999999999999999999999999999999999999999999999999987654321


Q ss_pred             CCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhh
Q 042323          235 NSSSVSATASNPLLGDILSLASAGLYAVYITLIRKK  270 (322)
Q Consensus       235 ~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~  270 (322)
                      .         ....|+.++++++++|++|.++.|+.
T Consensus       140 ~---------~~~~g~~~~l~aal~~a~~~i~~k~~  166 (281)
T TIGR03340       140 Q---------HRRKAYAWALAAALGTAIYSLSDKAA  166 (281)
T ss_pred             c---------cchhHHHHHHHHHHHHHHhhhhcccc
Confidence            1         12368889999999999999998874

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.37  E-value=2.6e-11  Score=110.71  Aligned_cols=108  Identities=31%  Similarity=0.508  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHH-HHhcCcccHHHHHHHHHHHHhhheeecCCCCC
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSL-LFLGEKFTWVKLVSVLLCMAGTIIVSLGDSEN  235 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~-~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~  235 (322)
                      ..+..+.+++.....+.+++.++++++++.++++.++.|+++.++++ ++++||+++++++++++++.|++++..++...
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          69 WLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            34556677777888999999999999999999999999999999997 66799999999999999999999998776544


Q ss_pred             CcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhC
Q 042323          236 SSSVSATASNPLLGDILSLASAGLYAVYITLIRKKL  271 (322)
Q Consensus       236 ~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~  271 (322)
                      .      .. ...|++++++++++||++.+..|+..
T Consensus       149 ~------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         149 G------IL-SLLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             h------hH-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            2      01 46899999999999999999999865

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.27  E-value=6.9e-11  Score=105.25  Aligned_cols=149  Identities=21%  Similarity=0.255  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCcccccCC
Q 042323          164 ICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATA  243 (322)
Q Consensus       164 ~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~~~~~  243 (322)
                      -.++...+..+.+.|+.+|+++..+++....-+|+.+++.-+++.+++.++|+|+.....|++++...|....+++....
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~  171 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDY  171 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccc
Confidence            45567777888999999999999999999999999999999999999999999999999999988766543321111222


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhccCcc-cccCcc
Q 042323          244 SNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLE-PFYRLT  317 (322)
Q Consensus       244 ~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~~~~-~~~~~~  317 (322)
                      ++.+.|+++.+.|.+.-|...++-+|.+++.     +++|....+|.+++|.+.+...+....+.... +|+..+
T Consensus       172 s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-----nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~  241 (372)
T KOG3912|consen  172 SSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-----NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNP  241 (372)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-----cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCC
Confidence            4568999999999999999999998877654     68999999999999977766666666555443 555433

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.26  E-value=1.2e-10  Score=107.82  Aligned_cols=114  Identities=24%  Similarity=0.324  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhh-hHHHHHHHHHHHHhcCcccHHH----HHHHHHHHHhhheee
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSS-TSSLFTFLVSLLFLGEKFTWVK----LVSVLLCMAGTIIVS  229 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~-t~Pvft~lls~~~l~er~s~~~----~~gv~l~~~Gv~lv~  229 (322)
                      ++.+...++.+..|..+|.+|+.|.++++++.+..+.+ +.++++.+++.+++|||.++++    ++|++++++|++++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            34666788889999999999999999999999988888 8899999999999999999999    999999999999887


Q ss_pred             cCCCCCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhh
Q 042323          230 LGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKK  270 (322)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~  270 (322)
                      ..+.+.. .+++ ..+...|++++++|+++|+.|.+..|+.
T Consensus       136 ~~~~~~~-~~~~-~~~~~~Gi~~~l~sg~~y~~~~~~~~~~  174 (290)
T TIGR00776       136 RSKDKSA-GIKS-EFNFKKGILLLLMSTIGYLVYVVVAKAF  174 (290)
T ss_pred             ecccccc-cccc-ccchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            6543221 0000 0223579999999999999999999975

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.24  E-value=3.3e-10  Score=102.08  Aligned_cols=149  Identities=25%  Similarity=0.277  Sum_probs=118.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCC
Q 042323          154 RTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDS  233 (322)
Q Consensus       154 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~  233 (322)
                      .++......+-++++.+.|.+.++++++++++...++..+-.++|++++++++|+|++.+||+++++.++|++++..++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            44556667788888999999999999999999999999999999999999999999999999999999999998876654


Q ss_pred             CCCccc--c-----cCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          234 ENSSSV--S-----ATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       234 ~~~~~~--~-----~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                      ...+.+  .     ....+...|.++.++++++-++..++.+|.+++.     +.+...-.....+++.++..+...+.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~-----~~s~~~~N~qL~~~gi~~~~~~~~~~~  167 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS-----NVSLWIQNMQLYLFGILFNLLALLLSD  167 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc-----chhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            431111  1     1134567999999999999999999999988764     345555555556666666665554444


Q ss_pred             c
Q 042323          307 F  307 (322)
Q Consensus       307 ~  307 (322)
                      +
T Consensus       168 ~  168 (244)
T PF04142_consen  168 G  168 (244)
T ss_pred             c
Confidence            3

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.20  E-value=1.5e-11  Score=108.74  Aligned_cols=139  Identities=17%  Similarity=0.233  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCc---
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS---  237 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~---  237 (322)
                      .+++|+..+.+..+.|||++|.+.++|++|.+++|+||.+++++++||+.++.+.++..+.+.||++++.+..-.++   
T Consensus       100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~  179 (346)
T KOG4510|consen  100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE  179 (346)
T ss_pred             EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence            45677777777788899999999999999999999999999999999999999999999999999999887543221   


Q ss_pred             -ccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          238 -SVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       238 -~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                       .+.+....+..|.+.++.++++-|.-.++.|+.-+       +.+......|..+++.+.........+
T Consensus       180 g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk-------~~h~~msvsyf~~i~lV~s~I~~~~ig  242 (346)
T KOG4510|consen  180 GEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGK-------NAHAIMSVSYFSLITLVVSLIGCASIG  242 (346)
T ss_pred             ccccccccccCCchHHHHHhHhhhhhHHHHHHHhhc-------cccEEEEehHHHHHHHHHHHHHHhhcc
Confidence             11111133457889999999999988888898534       345555556667777766655554443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.15  E-value=2e-09  Score=100.18  Aligned_cols=142  Identities=27%  Similarity=0.362  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCc
Q 042323          158 AKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS  237 (322)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~  237 (322)
                      ++..+..+++..++..+-+.|++|+|.....++.++.|+++++++.+++|+|.+.++++++++..+|+++....+.....
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   64 LKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            34455667778889999999999999999999999999999999999999999999999999999999988877654431


Q ss_pred             ccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042323          238 SVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALI  304 (322)
Q Consensus       238 ~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~  304 (322)
                      ...........|+++.+++.++.|.+.++.+|..++.     +.++...+.+..+++.+..++....
T Consensus       144 ~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~-----~~~~~~~mfy~n~~~~~~~~~~~~~  205 (303)
T PF08449_consen  144 SSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKY-----GKSPWELMFYTNLFSLPFLLILLFL  205 (303)
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            1122222233599999999999999999999976544     4677888889999998888777766

; GO: 0055085 transmembrane transport

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.12  E-value=2.2e-12  Score=113.35  Aligned_cols=148  Identities=26%  Similarity=0.390  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCc
Q 042323          158 AKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS  237 (322)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~  237 (322)
                      ++..++.++...-+|++..-|.|||+.+.+.++-+-.-..+.+++|+++|.|-.+.|+.|+++|+.|++++...|...+ 
T Consensus        78 ~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag-  156 (336)
T KOG2766|consen   78 WRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG-  156 (336)
T ss_pred             HHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc-
Confidence            3346666666777888889999999999999998888888999999999999999999999999999999988876553 


Q ss_pred             ccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhccCcccccC
Q 042323          238 SVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKLEPFYR  315 (322)
Q Consensus       238 ~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~~~~~~~~  315 (322)
                       +...++++..||.+.+++|-+||+.++......+       +.+...+++..+++|+++..+- ++.+..+..+.+|
T Consensus       157 -d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk-------n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w  225 (336)
T KOG2766|consen  157 -DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK-------NADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHW  225 (336)
T ss_pred             -cccCCCCCccCcEEEEecceeeeeccccHHHHHh-------cCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEee
Confidence             3444578899999999999999999999988776       5788999999999999887666 6666666666555

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.07  E-value=4.9e-10  Score=89.03  Aligned_cols=73  Identities=27%  Similarity=0.417  Sum_probs=64.2

Q ss_pred             HHHHHHH-HHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCC
Q 042323          161 SLLICPF-WFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE  234 (322)
Q Consensus       161 ~l~~~~~-~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~  234 (322)
                      .+..+.+ ...++.++++|+++++ +.++++.+++|+|+.+++++++|||++++++++++++++|++++..++.+
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            3444444 4588999999999999 58889999999999999999999999999999999999999999877654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.85  E-value=7.4e-08  Score=86.92  Aligned_cols=131  Identities=22%  Similarity=0.192  Sum_probs=101.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCC
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE  234 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~  234 (322)
                      ++.+....+.+.+.......|.+|.++-.+-++++=.+.+|++.++++.+++|||+++.||++++++.+||...+...++
T Consensus        69 p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~  148 (293)
T COG2962          69 PKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS  148 (293)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC
Confidence            34555666777778889999999999999999999999999999999999999999999999999999999976654332


Q ss_pred             CCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 042323          235 NSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFT  308 (322)
Q Consensus       235 ~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~  308 (322)
                      -          +    ..++.=|++|+.|..+-|+ +        ++++.+-++..++.-....+...+..+.+
T Consensus       149 l----------p----wval~la~sf~~Ygl~RK~-~--------~v~a~~g~~lE~l~l~p~al~yl~~l~~~  199 (293)
T COG2962         149 L----------P----WVALALALSFGLYGLLRKK-L--------KVDALTGLTLETLLLLPVALIYLLFLADS  199 (293)
T ss_pred             C----------c----HHHHHHHHHHHHHHHHHHh-c--------CCchHHhHHHHHHHHhHHHHHHHHHHhcC
Confidence            2          3    3556668899999888555 4        46777766666666555544444444433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.80  E-value=1.1e-08  Score=81.42  Aligned_cols=79  Identities=25%  Similarity=0.419  Sum_probs=67.4

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheee
Q 042323          151 RWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVS  229 (322)
Q Consensus       151 ~l~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~  229 (322)
                      ..+.++.......+.+...+++.++++|+++++++.++++.++.|+++.++++++++|++++.+++|++++++|++++.
T Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   47 NLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             CCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3344444444444444468899999999999999999999999999999999999999999999999999999998754

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.75  E-value=1.4e-07  Score=83.39  Aligned_cols=132  Identities=19%  Similarity=0.101  Sum_probs=98.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCC
Q 042323          154 RTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDS  233 (322)
Q Consensus       154 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~  233 (322)
                      .++.+...+..|......|.+||.+++.+|.+.+..+-++.|+.+.+++.    +  +.+..+-+.+++.|+.++.-.+.
T Consensus        67 ~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~  140 (292)
T COG5006          67 SKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQ  140 (292)
T ss_pred             ChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccC
Confidence            34455556777777888999999999999999999999999998887653    3  33455566777888886653332


Q ss_pred             CCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 042323          234 ENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALIL  305 (322)
Q Consensus       234 ~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~  305 (322)
                      +..       .....|..++++++.||+.|.+..||.-+.       .+...-++..+.+++++.+|+....
T Consensus       141 ~~~-------~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-------~~g~~g~a~gm~vAaviv~Pig~~~  198 (292)
T COG5006         141 SVW-------SLDPVGVALALGAGACWALYIVLGQRAGRA-------EHGTAGVAVGMLVAALIVLPIGAAQ  198 (292)
T ss_pred             CcC-------cCCHHHHHHHHHHhHHHHHHHHHcchhccc-------CCCchHHHHHHHHHHHHHhhhhhhh
Confidence            221       234589999999999999999999995432       2333445567888888888887643

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.72  E-value=4.2e-07  Score=84.21  Aligned_cols=144  Identities=19%  Similarity=0.191  Sum_probs=109.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCc
Q 042323          158 AKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS  237 (322)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~  237 (322)
                      .....+-+++|++.|-+++.++.+.++++.++...+--+.|+++..+++++|++++||.++++.++|+.++-.+.....+
T Consensus        92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~  171 (345)
T KOG2234|consen   92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG  171 (345)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            33455667789999999999999999999999999999999999999999999999999999999999988744332221


Q ss_pred             c-cccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          238 S-VSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       238 ~-~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                      . +.....+++.|....++++..-++..++..|.+++.     +.+...-.--..++|.++.+...+..+
T Consensus       172 a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s-----~~s~wi~NiqL~~~g~~f~~l~~~~~d  236 (345)
T KOG2234|consen  172 AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS-----NVSLWIRNIQLYFFGILFNLLTILLQD  236 (345)
T ss_pred             ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC-----CchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            1 134456788999999999999999999999987654     333333333334455555444444433

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=98.65  E-value=8.3e-08  Score=89.01  Aligned_cols=138  Identities=22%  Similarity=0.294  Sum_probs=118.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCC
Q 042323          156 RVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSEN  235 (322)
Q Consensus       156 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~  235 (322)
                      ..++..+..++..+++.++-+.++.+.+++...++-+++|+++.++++++.+|+.+...++.++....||.+....+.. 
T Consensus        81 ~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~-  159 (316)
T KOG1441|consen   81 LPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELS-  159 (316)
T ss_pred             cchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecccc-
Confidence            3455566667777888888899999999999999999999999999999999999999999999999999988765443 


Q ss_pred             CcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCC-CCCCCCCCcHHHHHHHHHHHHHHHHH-HHHHHHhc
Q 042323          236 SSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPD-DDGKNGDASMAQFLGFLGLFNLIIFL-PVALILHF  307 (322)
Q Consensus       236 ~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~-p~~~~~~~  307 (322)
                               -++.|.+.++++.+..+...++.|+...+ ++    +++...+..++.-++.+.++ |+....+.
T Consensus       160 ---------fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~----~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~  220 (316)
T KOG1441|consen  160 ---------FNLFGFISAMISNLAFALRNILSKKLLTSKGE----SLNSMNLLYYTAPISLIFLLIPFLDYVEG  220 (316)
T ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----ccCchHHHHHhhhHHHHHHhcchHhhhcc
Confidence                     24799999999999999999999997742 22    68999999999999998888 77665443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.65  E-value=2.1e-07  Score=84.13  Aligned_cols=67  Identities=25%  Similarity=0.311  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhh
Q 042323          160 VSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTI  226 (322)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~  226 (322)
                      ....+.+...+++.+|++++++++++.++++.++.|++++++++++++|+++..+++|+++.++|+.
T Consensus       194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            3334444467889999999999999999999999999999999999999999999999999999873

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.62  E-value=3.5e-07  Score=72.44  Aligned_cols=68  Identities=18%  Similarity=0.136  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheee
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVS  229 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~  229 (322)
                      .....+++++.+++..+++..|.+.+..+.++.++++.++++++++||++.+|++|+.+.++|++++.
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            33335578899999999999999999999999999999999999999999999999999999998765

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.60  E-value=5.4e-08  Score=77.23  Aligned_cols=74  Identities=28%  Similarity=0.338  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      .+....+.|+..+++..+||.|++...++..+-+-.++|+++.++++++++||++..+|+|+++..+|++++..
T Consensus        66 ~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          66 SWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             eehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            44555666777889999999999999999999999999999999999999999999999999999999998763

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.46  E-value=2.6e-06  Score=79.12  Aligned_cols=76  Identities=18%  Similarity=0.152  Sum_probs=65.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCC
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD  232 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~  232 (322)
                      +........+...+++.+|+.++++.+++.++.+.++.|++..++++++++|+++..+++|.++.++|+.+...+.
T Consensus       214 ~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        214 ILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            3334444445566788999999999999999999999999999999999999999999999999999998765543

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.46  E-value=1e-06  Score=83.84  Aligned_cols=66  Identities=15%  Similarity=0.168  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCC
Q 042323          167 FWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD  232 (322)
Q Consensus       167 ~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~  232 (322)
                      .-.+++.++++++++.+++.+++..+..|++++++++++++|+++..+++|.++.+.|+.++..+.
T Consensus       265 ~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        265 ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            345678899999999999999999999999999999999999999999999999999999887654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.45  E-value=1.6e-06  Score=80.37  Aligned_cols=70  Identities=16%  Similarity=0.125  Sum_probs=62.1

Q ss_pred             HHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCC
Q 042323          163 LICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD  232 (322)
Q Consensus       163 ~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~  232 (322)
                      ++.+...+++.+|++++++.+++.++++.++.|++..++++++++|+++..+++|.++.++|++......
T Consensus       214 lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        214 VAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            3333456788899999999999999999999999999999999999999999999999999998765443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.41  E-value=6.2e-07  Score=81.30  Aligned_cols=151  Identities=23%  Similarity=0.234  Sum_probs=114.2

Q ss_pred             hhcCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhh
Q 042323          147 AAKGRWTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTI  226 (322)
Q Consensus       147 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~  226 (322)
                      |.+...+++...+.....++.-++.-.+-+++++|++.+..++.-+++++|+.+++.++.-||+++.-..-+++..+|++
T Consensus        73 r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glf  152 (349)
T KOG1443|consen   73 RARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLF  152 (349)
T ss_pred             ccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhee
Confidence            33456777777777777777777777888999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCCCCCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          227 IVSLGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       227 lv~~~~~~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                      +.+.-+.+.          .+.|..+.++|+++-++--.+.+..+++.+.  .+-+|........-.-.+.++|..+..+
T Consensus       153 lft~KsTqf----------~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~--~~~~P~~ti~~l~p~M~~~Ll~~~l~fE  220 (349)
T KOG1443|consen  153 LFTYKSTQF----------NIEGFFLVLAASLLSGLRWAFTQMLLRNQPS--AKRNPIDTIFHLQPWMSIGLLPLSLLFE  220 (349)
T ss_pred             EEEecccce----------eehhHHHHHHHHHhhhhhHHHHHHHHhcCcc--ccCCCeeeHHHhhhHHHHHHHHHHHHHc
Confidence            888655432          3579999888888887777777666554431  1223343344444555566777777766


Q ss_pred             ccC
Q 042323          307 FTK  309 (322)
Q Consensus       307 ~~~  309 (322)
                      ..+
T Consensus       221 G~~  223 (349)
T KOG1443|consen  221 GLH  223 (349)
T ss_pred             ccc
Confidence            443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.39  E-value=3.3e-06  Score=78.26  Aligned_cols=70  Identities=16%  Similarity=0.197  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecC
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLG  231 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~  231 (322)
                      +..++...+++.+|++++++++++.++++.+..|++..++++++++|+++..+++|.++.+.|+++....
T Consensus       219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            3444556778999999999999999999999999999999999999999999999999999999876543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.26  E-value=5.1e-06  Score=76.84  Aligned_cols=72  Identities=13%  Similarity=0.130  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          159 KVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       159 ~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      .......+...+++.+|++++++.+++.++++.++.|++++++++++++|+++..+++|.++.++|++++..
T Consensus       214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            333343444668889999999999999999999999999999999999999999999999999999987654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.19  E-value=3.1e-06  Score=77.87  Aligned_cols=72  Identities=19%  Similarity=0.257  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhee
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIV  228 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv  228 (322)
                      .+......++...+++.++++++++.+++.++.+.+++|++..++++++++|+++..+++|.++.++|++++
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            334445555667788999999999999999999999999999999999999999999999999999999753

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.10  E-value=2.5e-05  Score=63.48  Aligned_cols=71  Identities=25%  Similarity=0.350  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHH--HhcCcccHHHHHHHHHHHHhhheeecC
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLL--FLGEKFTWVKLVSVLLCMAGTIIVSLG  231 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~--~l~er~s~~~~~gv~l~~~Gv~lv~~~  231 (322)
                      ...+.++++++.+++.++++..+++.+.-+.+..++++.+.++.  +++|+++..+++|+++.++|++++..+
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            44555668899999999999999999999999999999888885  799999999999999999999988754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.08  E-value=7.6e-05  Score=67.77  Aligned_cols=114  Identities=25%  Similarity=0.294  Sum_probs=91.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHh-hhHHHHHHHHHHHHhcCcccHHH----HHHHHHHHHhhheee
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILS-STSSLFTFLVSLLFLGEKFTWVK----LVSVLLCMAGTIIVS  229 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~-~t~Pvft~lls~~~l~er~s~~~----~~gv~l~~~Gv~lv~  229 (322)
                      .+.+..+++.|++|.+++...+.|.++..+|.+.-+. ..+-+.+.++++++++|.-+..+    .+|+++.++|+++..
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            4677888999999999999999999999999887775 66677799999999999776544    447888899999887


Q ss_pred             cCCCCCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhh
Q 042323          230 LGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKK  270 (322)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~  270 (322)
                      ..+..+.  ..+...+...|.+..+++.+.|..|.++.|..
T Consensus       122 ~~~~~~~--~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~  160 (269)
T PF06800_consen  122 YQDKKSD--KSSSKSNMKKGILALLISTIGYWIYSVIPKAF  160 (269)
T ss_pred             ccccccc--ccccccchhhHHHHHHHHHHHHHHHHHHHHhc
Confidence            7665443  11112344579999999999999999998863

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.04  E-value=3.1e-05  Score=64.18  Aligned_cols=72  Identities=22%  Similarity=0.429  Sum_probs=66.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhe
Q 042323          156 RVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTII  227 (322)
Q Consensus       156 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~l  227 (322)
                      +.....+..+++.+..|...+..++++++-..+++...-.+++.++++++++|+++..+++|++++++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            456666777888899999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.99  E-value=2.9e-05  Score=72.04  Aligned_cols=64  Identities=17%  Similarity=0.251  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecC
Q 042323          168 WFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLG  231 (322)
Q Consensus       168 ~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~  231 (322)
                      +...+.+++.++++++++.++++....|+++.++++++++|+++..+++|.++.++|+.+....
T Consensus       231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            4455677889999999999999999999999999999999999999999999999999876644

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.83  E-value=8.9e-05  Score=68.73  Aligned_cols=70  Identities=16%  Similarity=0.170  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      .+..++...+++.++++++++.+++.++++.+..|++..++++++++|+++..+++|.++.++|+.++..
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~  285 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM  285 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3334445567899999999999999999999999999999999999999999999999999888886653

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.82  E-value=0.00015  Score=66.54  Aligned_cols=132  Identities=19%  Similarity=0.236  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCccc
Q 042323          160 VSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSV  239 (322)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~  239 (322)
                      ..+...+++.+..+.-..+++|.++...+++-..+|+++++....++|.|++...|.++....+|.......|...    
T Consensus        79 k~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf----  154 (314)
T KOG1444|consen   79 KWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF----  154 (314)
T ss_pred             HHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee----
Confidence            3344455566666667899999999999999999999999999999999999999999999999998877666543    


Q ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          240 SATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       240 ~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                            ...|..|++...++-+.+.+..|+.++..     +.+-..+..|-.++....+....++.+
T Consensus       155 ------~~~gY~w~~~n~~~~a~~~v~~kk~vd~~-----~l~~~~lv~yNnl~~L~~l~~~~~~~g  210 (314)
T KOG1444|consen  155 ------NLRGYSWALANCLTTAAFVVYVKKSVDSA-----NLNKFGLVFYNNLLSLPPLLILSFITG  210 (314)
T ss_pred             ------cchhHHHHHHHHHHHHHHHHHHHHhhccc-----cccceeEEeehhHHHHHHHHHHHHHhc
Confidence                  23599999999999999999999977644     234444455666665555554444443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.80  E-value=0.00012  Score=58.49  Aligned_cols=71  Identities=18%  Similarity=0.362  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHH-HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCC
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSN-TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD  232 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a-~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~  232 (322)
                      ++...++.++.+++..++++.|.+.+ ++.....-+.+.+++.++++|+++..+++|+.+.++|++++-..+
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            45566688899999999999999988 445678899999999999999999999999999999999775433

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.79  E-value=0.0003  Score=66.89  Aligned_cols=69  Identities=9%  Similarity=0.228  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheee
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVS  229 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~  229 (322)
                      .+..++.+++.|.+.+++++++++...++.....|+++.++++++++|+++..+++|.+++++|+.+..
T Consensus       279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            334455566667777789999999999999999999999999999999999999999999999998643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.78  E-value=0.00018  Score=56.59  Aligned_cols=68  Identities=12%  Similarity=0.234  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHH-HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhee
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSN-TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIV  228 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a-~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv  228 (322)
                      .+....++.++.++...++++.|.+.+ ++.....-+.+.+.+.++++|++++.|++|+.+.++|++.+
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            455566688889999999999999987 67777888999999999999999999999999999999865

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.76  E-value=0.00017  Score=56.80  Aligned_cols=70  Identities=19%  Similarity=0.313  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHH-HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSN-TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a-~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      .+...+++.++.+++..+++..|.+.+ ++.....-+.+.++++++++|++++.+++|+.+.++|++++-.
T Consensus        33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            345566688889999999999999988 5557788899999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.76  E-value=0.00017  Score=55.95  Aligned_cols=69  Identities=28%  Similarity=0.354  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHH-HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheee
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSN-TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVS  229 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a-~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~  229 (322)
                      .++..+++.++.++...|++++|.+.+ ++.....-+.+.+.++++++|+++..+++++.+.++|++.+-
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            455566678889999999999999987 778888899999999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.72  E-value=0.00028  Score=55.16  Aligned_cols=69  Identities=17%  Similarity=0.280  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHH-HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheee
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSN-TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVS  229 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a-~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~  229 (322)
                      .+....++..+.++...+++..|.+.+ ++-....-+.+.+.+.++++|++++.+++|+.+.++|++.+-
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            344456678889999999999999977 667778899999999999999999999999999999999763

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=97.65  E-value=3.8e-05  Score=68.88  Aligned_cols=120  Identities=22%  Similarity=0.310  Sum_probs=95.6

Q ss_pred             HHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCcccccCCCCChHHHHHHH
Q 042323          175 FNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSATASNPLLGDILSL  254 (322)
Q Consensus       175 ~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L  254 (322)
                      -+++++|.+++-..+=.+..-+|+.++.++++|+|-+..-..+..+.+.|-.+=...++..       +.-++.|.+++.
T Consensus       119 nnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~-------~~ls~~GvifGV  191 (347)
T KOG1442|consen  119 NNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGST-------GTLSWIGVIFGV  191 (347)
T ss_pred             cceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccccc-------CccchhhhHHHH
Confidence            3688999999888888888899999999999999999888887777777765433222221       245679999999


Q ss_pred             HHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 042323          255 ASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILH  306 (322)
Q Consensus       255 ~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~  306 (322)
                      .|.++-|+..+..||..+..     .-....++.|..+.+.++.+|...+.+
T Consensus       192 laSl~vAlnaiytkk~l~~v-----~~~iw~lt~ynnv~a~lLflpll~lng  238 (347)
T KOG1442|consen  192 LASLAVALNAIYTKKVLPPV-----GDCIWRLTAYNNVNALLLFLPLLILNG  238 (347)
T ss_pred             HHHHHHHHHHHhhheecccc-----cCeehhhHHHHHHHHHHHHHHHHHHcc
Confidence            99999999999999866532     224577888999999999999988875

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.60  E-value=0.019  Score=52.64  Aligned_cols=138  Identities=19%  Similarity=0.126  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCc
Q 042323          158 AKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSS  237 (322)
Q Consensus       158 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~  237 (322)
                      ++.....++.-.+...+.+.|++|++=-...+--++=-+=+++++.++.+.|.+..+.+..++.-.|+.+....+.+++ 
T Consensus        83 l~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s-  161 (327)
T KOG1581|consen   83 LYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDS-  161 (327)
T ss_pred             hhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCC-
Confidence            4445555666677888999999999988888877877788899999999999999999999999999986655433321 


Q ss_pred             ccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 042323          238 SVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPV  301 (322)
Q Consensus       238 ~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~  301 (322)
                      .....+.++.+|..+....-++=++-+....++.++.     +++...++.+..++.++.....
T Consensus       162 ~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-----k~s~~~mM~~vNLf~~i~~~~~  220 (327)
T KOG1581|consen  162 SSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY-----KVSSLHMMFGVNLFSAILNGTY  220 (327)
T ss_pred             ccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC-----CccHhHHHHHHHHHHHHHHHHh
Confidence            2334445778999999888888888777777766532     6888999989999888765444

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.53  E-value=0.00031  Score=65.03  Aligned_cols=75  Identities=21%  Similarity=0.307  Sum_probs=67.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhc-ccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHH----HHHHHHHHhhheee
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLK-YTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKL----VSVLLCMAGTIIVS  229 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~-~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~----~gv~l~~~Gv~lv~  229 (322)
                      .+..+..++.++++.+++.+|+.+++ +.+++.++++.+..|+...+++++++||+.+++++    +|.++.+.|+.++.
T Consensus       208 ~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       208 KYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            33444556677779999999999999 99999999999999999999999999999999999    99999999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.39  E-value=0.00097  Score=60.51  Aligned_cols=75  Identities=24%  Similarity=0.263  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecC
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLG  231 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~  231 (322)
                      .......+.+..++++.+++++++..+++.++.+..+.|++..++++++++|+++..+++|+++.+.|+.+....
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            333333333334478999999999999999999999999999999999999999999999999999999876543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.33  E-value=0.0011  Score=61.76  Aligned_cols=64  Identities=22%  Similarity=0.416  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          167 FWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       167 ~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      .+.+++.+.+.|+.+.|++..+-+.+..-++.++++.+++|||+++..+.|++++++|++++..
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            3556777889999999999999999999999999999999999999999999999999986553

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.15  E-value=0.00082  Score=59.22  Aligned_cols=136  Identities=14%  Similarity=0.247  Sum_probs=100.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCccc
Q 042323          160 VSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSV  239 (322)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~  239 (322)
                      ......+-+.+++..-+.|++|.+--+..+--++-|+=++++++++.+++.++++...+++.++||++....+....   
T Consensus        87 ~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~---  163 (337)
T KOG1580|consen   87 MYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG---  163 (337)
T ss_pred             HHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC---
Confidence            34555566888888999999999988888889999999999999999999999999999999999998776543322   


Q ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 042323          240 SATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVAL  303 (322)
Q Consensus       240 ~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~  303 (322)
                      +..+.....|.++.++|-..=++-.....+. +..+    .-+...++.++.+++.+.+-...+
T Consensus       164 g~e~~t~g~GElLL~lSL~mDGlTg~~Qdri-ra~y----q~~g~~MM~~~NlwStL~Lg~g~l  222 (337)
T KOG1580|consen  164 GAEDKTFGFGELLLILSLAMDGLTGSIQDRI-RASY----QRTGTSMMFYTNLWSTLYLGAGLL  222 (337)
T ss_pred             CCcccccchHHHHHHHHHHhcccchhHHHHH-HHhh----ccCchhhHHHHHHHHHHHhhhhhe
Confidence            1112334589999999988888777776653 2222    123344555777777766544443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.14  E-value=0.0018  Score=49.51  Aligned_cols=58  Identities=21%  Similarity=0.266  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHHHHhcccchHHH-HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHH
Q 042323          163 LICPFWFLAQLTFNLSLKYTTVTSN-TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLL  220 (322)
Q Consensus       163 ~~~~~~~~~~~~~~~al~~~s~s~a-~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l  220 (322)
                      ....++.++.+++..++++.|.+.+ ++......+.+.+.+.++++|+++..|++|+.+
T Consensus        34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            3444688888999999999999988 666779999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.00  E-value=0.014  Score=55.14  Aligned_cols=110  Identities=18%  Similarity=0.219  Sum_probs=85.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH-HhhhHHHHHHHHHHHHhcCcc-------cHHHHHHHHHHHHhhh
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTI-LSSTSSLFTFLVSLLFLGEKF-------TWVKLVSVLLCMAGTI  226 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~i-l~~t~Pvft~lls~~~l~er~-------s~~~~~gv~l~~~Gv~  226 (322)
                      .+.+...++.|++|.++|..++.++++..++.+.- -..++-++..++..++++|-.       ...-++|+++.++|++
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            34677789999999999999999999999998854 467888999999999988643       2457889999999999


Q ss_pred             eeec----CCCCCCcccccCCCCChHHHHHHHHHHHHHHHHHH
Q 042323          227 IVSL----GDSENSSSVSATASNPLLGDILSLASAGLYAVYIT  265 (322)
Q Consensus       227 lv~~----~~~~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~v  265 (322)
                      +...    .+.... .+...+.+...|.++++++.+.|+.|..
T Consensus       150 l~s~Ag~~k~~~~~-~~~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        150 IVGRAGQLKERKMG-IKKAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             HHHHhhhhcccccc-cccccccchHhHHHHHHHHHHHHHHHHH
Confidence            8876    322211 0001234556899999999999999994

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.55  E-value=0.015  Score=51.96  Aligned_cols=72  Identities=18%  Similarity=0.230  Sum_probs=60.7

Q ss_pred             hhHHHHHHHHHHH-HHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhh
Q 042323          155 TRVAKVSLLICPF-WFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTI  226 (322)
Q Consensus       155 ~~~~~~~l~~~~~-~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~  226 (322)
                      .......+..+++ -.+.+.+-..+++..|....+++.+..|.+.++.++++++|++|..||+++...+++.+
T Consensus       206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            3344444544444 44678888999999999999999999999999999999999999999999988887776

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.50  E-value=0.0098  Score=46.96  Aligned_cols=67  Identities=18%  Similarity=0.183  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHH-hhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhee
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSNTIL-SSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIV  228 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a~il-~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv  228 (322)
                      .+...+...+...|++.+...+.|.+.-+ +++.=+||++.++++.+|..++++++|+++.+.|+.+.
T Consensus        45 ~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   45 IIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            34445567788899999999999998877 48889999999988888888999999999999999864

Many members are annotated as potential transmembrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.44  E-value=0.014  Score=54.29  Aligned_cols=74  Identities=20%  Similarity=0.311  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      .....++.++....++.+.+.-.+..++...+++..+--+++.+++.++++++++..+|+|+++.+.|..+-..
T Consensus       224 ~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  224 VLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            44455566666667777777888999999999999999999999999999999999999999999999986543

; GO: 0055085 transmembrane transport

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.16  E-value=0.0055  Score=56.50  Aligned_cols=69  Identities=14%  Similarity=0.297  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCC
Q 042323          164 ICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD  232 (322)
Q Consensus       164 ~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~  232 (322)
                      +.+.+.++...-|.|..+.|++..+-|.+++-++.++++..+++||++....+|.++|++|..+++...
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            344466777788999999999999999999999999999999999999999999999999999665443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.08  E-value=0.027  Score=53.07  Aligned_cols=73  Identities=21%  Similarity=0.424  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCC
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDS  233 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~  233 (322)
                      .+..++..++.+.+.-..+++++++...+=.-|+.++.++++.+++++++++..++|.++.++|.++....+.
T Consensus       236 ~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  236 LVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            3344444566666777889999999888877888999999999999999999999999999999998765443

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.00  E-value=0.0078  Score=54.26  Aligned_cols=132  Identities=15%  Similarity=0.184  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCCCCccccc
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSENSSSVSA  241 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~~~~~~~~  241 (322)
                      ...+.+......+-+-++.|++--...+.-++--+=+++.+.++-+.|-.+....+..+..+|+++.+..|....     
T Consensus       110 ~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s-----  184 (367)
T KOG1582|consen  110 VILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS-----  184 (367)
T ss_pred             hhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC-----
Confidence            334444445556667778888766666667777777788899999999999999999999999999888776543     


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 042323          242 TASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALI  304 (322)
Q Consensus       242 ~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~  304 (322)
                       .+-+..|+.+.-+|-++=|+-.-+..+..+..+     -+...+..+...+|.++++..+..
T Consensus       185 -PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~-----~ss~EmvfySy~iG~vflf~~mvl  241 (367)
T KOG1582|consen  185 -PNFNLIGVMMISGALLADAVIGNVQEKAMKMNP-----ASSSEMVFYSYGIGFVFLFAPMVL  241 (367)
T ss_pred             -CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCC-----CCcceEEEeeecccHHHHHHHHHh
Confidence             233468999888888888877777666555432     222334445555555555444433

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=95.69  E-value=0.023  Score=49.86  Aligned_cols=145  Identities=19%  Similarity=0.273  Sum_probs=102.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCC
Q 042323          154 RTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDS  233 (322)
Q Consensus       154 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~  233 (322)
                      .++|+...++....    -+.-.-+++|.++...++.-+++-+.++.....+++.|++..+....++.+...+.-..+|.
T Consensus        68 aK~WfpiSfLLv~M----Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~  143 (309)
T COG5070          68 AKKWFPISFLLVVM----IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ  143 (309)
T ss_pred             hhhhcCHHHHHHHH----HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh
Confidence            34455454443333    33446889999999999999999999999999999999999999999888888776666665


Q ss_pred             CCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 042323          234 ENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKL  310 (322)
Q Consensus       234 ~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~~~  310 (322)
                      +..   ......-..|.+|+..-.+.-|.|.+..|+.++-.+     ..-...+.|-.+.+..+++.+.++++-...
T Consensus       144 q~~---~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltN-----f~d~dtmfYnNllslPiL~~~s~~~edws~  212 (309)
T COG5070         144 QAS---AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTN-----FKDFDTMFYNNLLSLPILLSFSFLFEDWSP  212 (309)
T ss_pred             hHH---HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccc-----cchhhHHHHhhhHHHHHHHHHHHHhccCCc
Confidence            322   000111235889999999999999999998765332     122334557777777777766666654333

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.53  E-value=0.033  Score=50.75  Aligned_cols=64  Identities=20%  Similarity=0.257  Sum_probs=56.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHH
Q 042323          156 RVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVL  219 (322)
Q Consensus       156 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~  219 (322)
                      |..+.-++.|++|.++|.+++.+.+....+.+-.+..+.++...+.+.+++||+-+++++..++
T Consensus       193 k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  193 KKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             cchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence            3355678889999999999999999999999999999999999999999999998887765443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.35  E-value=0.0026  Score=56.48  Aligned_cols=114  Identities=20%  Similarity=0.229  Sum_probs=87.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHh-hhHHHHHHHHHHHHhcCcccHHH----HHHHHHHHHhhheee
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILS-STSSLFTFLVSLLFLGEKFTWVK----LVSVLLCMAGTIIVS  229 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~-~t~Pvft~lls~~~l~er~s~~~----~~gv~l~~~Gv~lv~  229 (322)
                      .+.+...++.+++|..++...+-|+++..++.+.-+. .++-+-+.+++++.++|-.+..+    .+++++.++|+.+-.
T Consensus        56 ~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs  135 (288)
T COG4975          56 LTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS  135 (288)
T ss_pred             hhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence            4467788899999999999999999999999887764 56677888999999999877644    457778888998887


Q ss_pred             cCCCCCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhh
Q 042323          230 LGDSENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKK  270 (322)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~  270 (322)
                      ..+..+.  +.+...+.-.|....+.|.+.|-.|.++.+..
T Consensus       136 ~~~~~nk--~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f  174 (288)
T COG4975         136 KQDRNNK--EEENPSNLKKGIVILLISTLGYVGYVVLFQLF  174 (288)
T ss_pred             eeccccc--cccChHhhhhheeeeeeeccceeeeEeeeccc
Confidence            7665332  11222334468888888999999998887764

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.33  E-value=0.08  Score=48.38  Aligned_cols=76  Identities=18%  Similarity=0.227  Sum_probs=67.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      ...+.+....|..-.+...+|..|-+.++.+...++++..|.+..+++.++++|+++..|..+-+..-+|+++...
T Consensus       208 ~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         208 NSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             chHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3455666777777889999999999999999999999999999999999999999999999999988888886653

>TIGR00803 nst UDP-galactose transporter

Probab=94.94  E-value=0.04  Score=48.65  Aligned_cols=61  Identities=15%  Similarity=0.243  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhe
Q 042323          167 FWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTII  227 (322)
Q Consensus       167 ~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~l  227 (322)
                      ...+...+..+.++|.++..-++...+.++++.+++.++++++++..+++|+.+.+.|+.+
T Consensus       161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3455666788999999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=94.93  E-value=0.094  Score=43.06  Aligned_cols=62  Identities=31%  Similarity=0.374  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhccCc
Q 042323          249 GDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPVALILHFTKL  310 (322)
Q Consensus       249 G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~~~~~~~~~  310 (322)
                      |.+++++|.++.|++.++.|+..++......+.++..+..+....+.+++.|..++.+..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~   62 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQL   62 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            67899999999999999999977763111227899999999999999999999998876653

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=94.31  E-value=0.19  Score=47.08  Aligned_cols=113  Identities=22%  Similarity=0.305  Sum_probs=81.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccchHHH-HHHhhhHHHHHHHHHHHHhc-------CcccHHHHHHHHHHHHhhhe
Q 042323          156 RVAKVSLLICPFWFLAQLTFNLSLKYTTVTSN-TILSSTSSLFTFLVSLLFLG-------EKFTWVKLVSVLLCMAGTII  227 (322)
Q Consensus       156 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a-~il~~t~Pvft~lls~~~l~-------er~s~~~~~gv~l~~~Gv~l  227 (322)
                      .......+.+++|++....|-.+++|+..+.. ++...+.-++-.++-.++.+       .+-....++|++++++|+++
T Consensus        71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai  150 (344)
T PF06379_consen   71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI  150 (344)
T ss_pred             hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence            35667788999999999999999999998866 55566666666666555533       23345789999999999998


Q ss_pred             eecCCCCCC--cccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 042323          228 VSLGDSENS--SSVSATASNPLLGDILSLASAGLYAVYITLIR  268 (322)
Q Consensus       228 v~~~~~~~~--~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k  268 (322)
                      +...+....  .+.+..+.+--.|.++++.|.+..|.+++-..
T Consensus       151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~  193 (344)
T PF06379_consen  151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD  193 (344)
T ss_pred             HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            865432111  01122234456899999999999999988653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=93.85  E-value=0.038  Score=50.05  Aligned_cols=136  Identities=21%  Similarity=0.248  Sum_probs=86.1

Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHHHHhcc-cchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhee
Q 042323          150 GRWTRTRVAKVSLLICPFWFLAQLTFNLSLKY-TTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIV  228 (322)
Q Consensus       150 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~al~~-~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv  228 (322)
                      ++.+.|+.    +....+++..+.+-++|+++ ++...--++-+-+++-+++++++++++|-+.+|+.++++.-+|+++-
T Consensus        60 ~kiplk~Y----~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIc  135 (330)
T KOG1583|consen   60 PKIPLKDY----AITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIIC  135 (330)
T ss_pred             CCCchhhh----heehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeE
Confidence            44455543    33344566777788899987 45555566778889999999999999999999999999999999987


Q ss_pred             ecCCCCCCcc-------cccCCC--CChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHH
Q 042323          229 SLGDSENSSS-------VSATAS--NPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFN  294 (322)
Q Consensus       229 ~~~~~~~~~~-------~~~~~~--~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~  294 (322)
                      +..+..+..+       ++....  -..+|+.+...|-+.-|.-.++.+...++..     -++...++|.-+..
T Consensus       136 Tl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG-----Kh~~EalFytH~Ls  205 (330)
T KOG1583|consen  136 TLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG-----KHWKEALFYTHFLS  205 (330)
T ss_pred             EeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CChHHHHHHHHHhc
Confidence            6544332211       111111  1246776666666666655555443322211     23455555655543

>TIGR00688 rarD rarD protein

Probab=93.17  E-value=0.29  Score=44.00  Aligned_cols=49  Identities=10%  Similarity=0.032  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHH
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLF  205 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~  205 (322)
                      .+...+..++...+++.++++|+++.+++.++++.++.|+++.+++.+.
T Consensus       207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            3444445555567889999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=92.70  E-value=0.71  Score=37.83  Aligned_cols=67  Identities=16%  Similarity=0.186  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHh-hhHHHHHHHHHHH----HhcCcccHHHHHHHHHHHHhhhe
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSNTILS-STSSLFTFLVSLL----FLGEKFTWVKLVSVLLCMAGTII  227 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a~il~-~t~Pvft~lls~~----~l~er~s~~~~~gv~l~~~Gv~l  227 (322)
                      ..++|++....-.+..+......++.++.+. .-+-+...++..+    .-+++++..|++|+++.++|+++
T Consensus        67 ~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   67 AYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            4456666666667778888999988776654 5556666677775    35688999999999999999874

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.56  E-value=0.21  Score=44.42  Aligned_cols=71  Identities=17%  Similarity=0.174  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhe
Q 042323          157 VAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTII  227 (322)
Q Consensus       157 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~l  227 (322)
                      .++-..+.++...+++++.+.-..+-++-.-+++..|--+|+.+.++++++..++.+||+|..+.+.|...
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            44555566666777888888888888887888888999999999999999999999999999999998875

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=91.83  E-value=0.3  Score=46.23  Aligned_cols=148  Identities=11%  Similarity=0.115  Sum_probs=104.7

Q ss_pred             hhHHHHhHHHHHHHHHHHHHHHHHHHHHhhCC-C---cceEEEEeccceehhhhhhHhhhhHHHhhcccceeecccCcCc
Q 042323            5 VWKWGLGLIYIVAVAIIWIAASFVVQSVVDAG-V---SPFLVTYICNSLFVVYIPIAEIGRYLVDTYGSVLFWKNRKSGT   80 (322)
Q Consensus         5 ~~~~~lG~~~~~~v~v~Wv~ss~l~~~l~~~~-~---~Pf~~t~~~~s~f~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~   80 (322)
                      ..|-++|-++-++.+++..+-+.+.++-.++. .   -|-|.-|+.---+.++.|...+..++.          .++-  
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~----------~e~F--  309 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG----------EERF--  309 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc----------cCcc--
Confidence            45678999999999999999999999866443 2   466777766555555565544322211          1000  


Q ss_pred             ccccCchhhhhhhhccCCCCCCCCCCCccccccccccccccccCCCCcccccccccCCchhhhhhhhhcCCCchhhHHHH
Q 042323           81 LQELGDSEKAILLEESNVGVKGEESPQSLIVQEGEIGQQEKSIDSGSEFVSDEFQSSLPIVEAEESAAKGRWTRTRVAKV  160 (322)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  160 (322)
                                ++.                                                           +..+....
T Consensus       310 ----------~lP-----------------------------------------------------------~~~q~~~v  320 (416)
T KOG2765|consen  310 ----------ELP-----------------------------------------------------------SSTQFSLV  320 (416)
T ss_pred             ----------cCC-----------------------------------------------------------CCceeEee
Confidence                      000                                                           00111223


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCC
Q 042323          161 SLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDS  233 (322)
Q Consensus       161 ~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~  233 (322)
                      .+..+++-+++.++|..|.-.+++-.+++=++.+--..++.-.++.+.+++...++|.+..++|-+++...+.
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            3445666788999999999999999999877776667788888888999999999999999999998876654

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=91.11  E-value=0.04  Score=49.76  Aligned_cols=75  Identities=20%  Similarity=0.327  Sum_probs=64.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheee
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVS  229 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~  229 (322)
                      ++.+++....|+..++++.+...|+|.--++-.++..++..+|..+.-.+++++-|+++.|.|.++.+...+.+.
T Consensus       250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA  324 (346)
T ss_pred             ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence            445566667788888999999999999999999999999999999999999999999999988776655555443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=90.83  E-value=0.86  Score=43.18  Aligned_cols=77  Identities=21%  Similarity=0.214  Sum_probs=57.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH---Hh-hhHHHHHHHHHHHHhcCccc------HHHHHHHHHHHHh
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTI---LS-STSSLFTFLVSLLFLGEKFT------WVKLVSVLLCMAG  224 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~i---l~-~t~Pvft~lls~~~l~er~s------~~~~~gv~l~~~G  224 (322)
                      .+....+.+.++.|.+.+.+|..|-...+.+.+.+   +. .+..++..+-+. ++||+=+      +.-++|+++.++|
T Consensus       257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g  335 (345)
T PRK13499        257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA  335 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence            34555668889999999999999998886665544   55 666677777676 5998766      5668888888888


Q ss_pred             hheeecCC
Q 042323          225 TIIVSLGD  232 (322)
Q Consensus       225 v~lv~~~~  232 (322)
                      ++++..++
T Consensus       336 ~~lig~~~  343 (345)
T PRK13499        336 ANIVGLGN  343 (345)
T ss_pred             HHHHhhcc
Confidence            88776543

>TIGR00803 nst UDP-galactose transporter

Probab=88.31  E-value=11  Score=33.11  Aligned_cols=87  Identities=25%  Similarity=0.303  Sum_probs=50.8

Q ss_pred             HHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCCC-----------------CCcccccCCCCChH
Q 042323          186 SNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDSE-----------------NSSSVSATASNPLL  248 (322)
Q Consensus       186 ~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~~-----------------~~~~~~~~~~~~~~  248 (322)
                      ......+..++++++..+.+.++|.+..|+++.++...|++.-...+.+                 ...+.....++.+.
T Consensus         6 a~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~~   85 (222)
T TIGR00803         6 IHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPVV   85 (222)
T ss_pred             chHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHHH
Confidence            3445566667777777776677776677777777766666532211110                 00000111234567


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCC
Q 042323          249 GDILSLASAGLYAVYITLIRKKLP  272 (322)
Q Consensus       249 G~ll~L~aa~~~A~~~vl~k~~~~  272 (322)
                      |..+.+.+.++-+.-.++.++..+
T Consensus        86 g~~~~l~a~~~~~~~~~y~e~~~k  109 (222)
T TIGR00803        86 GLSAVLSALLSSGFAGVYFEKILK  109 (222)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHccc
Confidence            777778888877777888777544

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=87.83  E-value=0.17  Score=45.28  Aligned_cols=67  Identities=22%  Similarity=0.317  Sum_probs=57.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHH
Q 042323          153 TRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVL  219 (322)
Q Consensus       153 ~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~  219 (322)
                      +..|..++-++-++.|..+|.++++|-+....+++-.+..+..+...+-+.+++|||-+++++..++
T Consensus       204 ~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~  270 (288)
T COG4975         204 RFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVI  270 (288)
T ss_pred             chHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhh
Confidence            3455566678889999999999999999998888888888889999999999999999998876554

>PRK02237 hypothetical protein; Provisional

Probab=85.23  E-value=6.3  Score=30.71  Aligned_cols=44  Identities=9%  Similarity=0.158  Sum_probs=33.8

Q ss_pred             HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecC
Q 042323          188 TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLG  231 (322)
Q Consensus       188 ~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~  231 (322)
                      +.--....+...+..+.+-+.||+...++|..+|++|+.++...
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            33344445555677788889999999999999999999877543

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=84.41  E-value=1.3  Score=40.96  Aligned_cols=73  Identities=18%  Similarity=0.238  Sum_probs=61.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhe
Q 042323          155 TRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTII  227 (322)
Q Consensus       155 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~l  227 (322)
                      ++.++-.++.+.+..+++.+-++-++.-.+-.-+.|+.|--++..+++.+.++.+++..+|+|+.+.|.|+.+
T Consensus       238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            3455556666777778888888888877777778889999999999999999999999999999999999874

>PRK10666 ammonium transporter; Provisional

Probab=82.21  E-value=52  Score=32.30  Aligned_cols=127  Identities=14%  Similarity=0.110  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccc------hHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCCC
Q 042323          160 VSLLICPFWFLAQLTFNLSLKYTT------VTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGDS  233 (322)
Q Consensus       160 ~~l~~~~~~~~~~~~~~~al~~~s------~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~~  233 (322)
                      ...++.++.-..++.|+-+.....      +...+.+....-..+.++...+.+.|++.....--++  +|.+-++....
T Consensus       222 ~~~lGt~lLw~GW~gFN~Gs~~~~~~~a~~a~~nT~la~a~g~l~~~~~~~~~~gk~~~~~~~nG~L--aGLVaITa~a~  299 (428)
T PRK10666        222 MVFTGTAILYIGWFGFNAGSAGAANEIAALAFVNTVVATAAAILGWVFGEWALRGKPSLLGACSGAI--AGLVGVTPACG  299 (428)
T ss_pred             HHHHHHHHHHHHHHhccchhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHh--hhhhhcccccc
Confidence            344555554455555655544321      1222333333333444433344556777655433222  55554443222


Q ss_pred             CCCcccccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 042323          234 ENSSSVSATASNPLLGDILSLASAGLYAVYITLIRKKLPDDDGKNGDASMAQFLGFLGLFNLIIFLPV  301 (322)
Q Consensus       234 ~~~~~~~~~~~~~~~G~ll~L~aa~~~A~~~vl~k~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~  301 (322)
                      -         -.++...+..+++++.+-......|++.+=+|    .++...+=+..++++.+..-.+
T Consensus       300 ~---------v~p~~A~iiG~vag~v~~~~~~~l~~~~~iDD----~~~a~~vHgv~Gi~G~l~~glf  354 (428)
T PRK10666        300 Y---------VGVGGALIIGVVAGLAGLWGVTMLKRWLRVDD----PCDVFGVHGVCGIVGCILTGIF  354 (428)
T ss_pred             c---------CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----CcCccHhhhHhHHHHHHHHHHh
Confidence            1         23455666666666655443333343233222    4666666666677776554433

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=82.15  E-value=13  Score=33.43  Aligned_cols=52  Identities=19%  Similarity=0.223  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHH
Q 042323          168 WFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVL  219 (322)
Q Consensus       168 ~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~  219 (322)
                      ..++-.+...-++|.+.-.=..-.+.+-+++.+++.++++.+++..-.+|..
T Consensus       191 ~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  191 QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            4444555667789999888888888899999999999999999998877754

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=82.10  E-value=4.6  Score=37.57  Aligned_cols=79  Identities=29%  Similarity=0.497  Sum_probs=60.6

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          152 WTRTRVAKVSLLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       152 l~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      +.....+-...+.|++-++-+++-++..+..|+...++...-.-.-+.+...++.++++++..++|+.+++.|-++-..
T Consensus       222 ~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  222 WSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            4444445556677777777888889999999998888888666677777777777788899999999999888876443

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=80.69  E-value=6.2  Score=30.69  Aligned_cols=53  Identities=13%  Similarity=0.206  Sum_probs=38.3

Q ss_pred             hcccchHHH-HHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecC
Q 042323          179 LKYTTVTSN-TILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLG  231 (322)
Q Consensus       179 l~~~s~s~a-~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~  231 (322)
                      ++-.+.+.+ +.--...-+...+..+.+-++||++..++|..+|++|+.++...
T Consensus        51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            443333333 33444455666777788889999999999999999999987654

; GO: 0016020 membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=80.54  E-value=26  Score=32.62  Aligned_cols=67  Identities=19%  Similarity=0.349  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhhee
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIV  228 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv  228 (322)
                      .+++..-++....-+.=+..|++-..++..---=+.+.+++.++.+++++...|.|..++..|+.+=
T Consensus       247 ~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  247 SLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            3334443333344455555666555555555556788999999999999999999999999999865

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=80.42  E-value=0.6  Score=43.71  Aligned_cols=68  Identities=19%  Similarity=0.311  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHhcccchHHHHHHhhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeec
Q 042323          163 LICPFWFLAQLTFNLSLKYTTVTSNTILSSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSL  230 (322)
Q Consensus       163 ~~~~~~~~~~~~~~~al~~~s~s~a~il~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~  230 (322)
                      +..++.+..|..-|..+..+++-+-++....==+++.+.++++++++++..+.+|.+++++|+++=..
T Consensus       240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            33366777888889999999998888888777777888898999999999999999999999986543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	322
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.56
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.48

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.56  E-value=2.8e-07  Score=71.77  Aligned_cols=71  Identities=17%  Similarity=0.267  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHH-hhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCC
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSNTIL-SSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD  232 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a~il-~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~  232 (322)
                      +...+++.++.+++..++++.|.+.+..+ .++.|+++.++++++++|+++..+++|+.+.++|++++...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45556688899999999999999999777 799999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.48  E-value=1.4e-07  Score=76.27  Aligned_cols=71  Identities=17%  Similarity=0.267  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchHHHHHH-hhhHHHHHHHHHHHHhcCcccHHHHHHHHHHHHhhheeecCC
Q 042323          162 LLICPFWFLAQLTFNLSLKYTTVTSNTIL-SSTSSLFTFLVSLLFLGEKFTWVKLVSVLLCMAGTIIVSLGD  232 (322)
Q Consensus       162 l~~~~~~~~~~~~~~~al~~~s~s~a~il-~~t~Pvft~lls~~~l~er~s~~~~~gv~l~~~Gv~lv~~~~  232 (322)
                      ++..+.++++++++++++++.+++.+..+ .++.|++++++++++++|+++..+++|+++.++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            45566688899999999999999999888 899999999999999999999999999999999999886543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00