Citrus Sinensis ID: 042418

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MQGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERLIGVVRVSSLLLSQSWNQRHHHDCGFISPQLFFFLIEKKNHLF
Secondary Structure (PSIPRED)
ccccEEEEEccccccEEEccEEEEEEEEcccEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEEEEEEEcccccccccEEcEEEEcccccccccccccccccccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEccccccEEEEEEEEEEEEccccEEEEEEEccHHHHHHHHHHHHHHHHHHHEEEHEEHEEcccHHHccHHHEEEEEEccccHHHHcccccccccccccccHHEEEEccccccc
Coil and Loop (DISEMBL)
mqgswivrhsvgsttcllgkavdcnylhgpkyleidvdigsstvaNGVLGLVNGVITTLVVDMAFLVQanttdelperlIGVVRVSSLLLSqswnqrhhhdcgfispQLFFFLIEKKNHLF
Flexible Loop (DISEMBL)
MQGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQAnttdelperLIGVVRVSSLLLSQSWNQRHHHDCGFISPQLFFFLIEKKNHLF
Low Complexity Region (SEG)
MQGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSStvangvlglvngvittlvvDMAFLVQANTTDELPERLIGvvrvsslllsQSWNQRHHHDCGFISPQLFFFLIEKKNHLF
Disordered region (IsUnstruct)
****WIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERLIGVVRVSSLLLSQSWNQRHHHDCGFISPQLFFFLIE******
Disordered Region (DISOPRED)
*QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERLIGVVRVSSLLLSQSWNQRHHHDCGFISPQLFFFLIEKKNHL*
Disordered Region (DISEMBL)
MQGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERLIGVVRVSSLLLSQSWNQRHHHDCGFISPQLFFFLIEKKNHLF
Disordered Region (DISPRO)
*QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERLIGVVRVSSLLLSQSWNQRHHHDCGFISPQLFFFLIEKK**LF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERLIGVVRVSSLLLSQSWNQRHHHDCGFISPQLFFFLIEKKNHLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
255557651	727	lipid binding protein, putative [Ricinus	0.760	0.126	0.847	2e-37
224139070	725	predicted protein [Populus trichocarpa]	0.760	0.126	0.847	2e-37
296088382	710	unnamed protein product [Vitis vinifera]	0.760	0.129	0.858	3e-37
359474679	715	PREDICTED: uncharacterized protein LOC10	0.760	0.128	0.858	3e-37
225427395	722	PREDICTED: uncharacterized protein LOC10	0.760	0.127	0.858	3e-37
224074418	723	predicted protein [Populus trichocarpa]	0.760	0.127	0.847	3e-37
225427393	716	PREDICTED: uncharacterized protein LOC10	0.760	0.128	0.858	3e-37
356531485	722	PREDICTED: uncharacterized protein LOC10	0.760	0.127	0.847	4e-37
356496432	725	PREDICTED: uncharacterized protein LOC10	0.760	0.126	0.847	4e-37
449456757	724	PREDICTED: uncharacterized protein LOC10	0.760	0.127	0.826	1e-36

>gi|255557651|ref|XP_002519855.1| lipid binding protein, putative [Ricinus communis] gi|223540901|gb|EEF42459.1| lipid binding protein, putative [Ricinus communis]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 84/92 (91%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLE+DVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 626 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEVDVDIGSSTVANGVLGLVIGVITTLVV 685

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANTT+ELPERLIG VRVS + LS +
Sbjct: 686 DMAFLVQANTTEELPERLIGAVRVSHIELSSA 717

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139070|ref|XP_002326760.1| predicted protein [Populus trichocarpa] gi|222834082|gb|EEE72559.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 84/92 (91%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLE+DVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 624 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEVDVDIGSSTVANGVLGLVIGVITTLVV 683

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANTT+ELPERLIG VRVS + LS +
Sbjct: 684 DMAFLVQANTTEELPERLIGAVRVSHIELSSA 715

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088382|emb|CBI37373.3| unnamed protein product [Vitis vinifera]

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 83/92 (90%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLEIDVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 608 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 667

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANT DELPERLIG VRVS + LS +
Sbjct: 668 DMAFLVQANTVDELPERLIGAVRVSHVELSSA 699

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474679|ref|XP_003631511.1| PREDICTED: uncharacterized protein LOC100246589 [Vitis vinifera]

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 83/92 (90%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLEIDVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 613 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 672

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANT DELPERLIG VRVS + LS +
Sbjct: 673 DMAFLVQANTVDELPERLIGAVRVSHVELSSA 704

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427395|ref|XP_002262787.1| PREDICTED: uncharacterized protein LOC100246589 isoform 3 [Vitis vinifera]

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 83/92 (90%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLEIDVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 620 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 679

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANT DELPERLIG VRVS + LS +
Sbjct: 680 DMAFLVQANTVDELPERLIGAVRVSHVELSSA 711

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074418|ref|XP_002304367.1| predicted protein [Populus trichocarpa] gi|222841799|gb|EEE79346.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 84/92 (91%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLE+DVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 622 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEVDVDIGSSTVANGVLGLVIGVITTLVV 681

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANTT+ELPERLIG VRVS + LS +
Sbjct: 682 DMAFLVQANTTEELPERLIGAVRVSHIELSSA 713

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427393|ref|XP_002262725.1| PREDICTED: uncharacterized protein LOC100246589 isoform 1 [Vitis vinifera]

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/92 (85%), Positives = 83/92 (90%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLEIDVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 614 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVCGVITTLVV 673

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANT DELPERLIG VRVS + LS +
Sbjct: 674 DMAFLVQANTVDELPERLIGAVRVSHVELSSA 705

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531485|ref|XP_003534308.1| PREDICTED: uncharacterized protein LOC100808706 [Glycine max]

 Score =  158 bits (400), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 82/92 (89%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLEIDVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 621 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVV 680

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANT DELPERLIG VR+S L L  +
Sbjct: 681 DMAFLVQANTPDELPERLIGAVRISHLELKSA 712

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496432|ref|XP_003517072.1| PREDICTED: uncharacterized protein LOC100806401 [Glycine max]

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 82/92 (89%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLEIDVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 624 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVV 683

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFLVQANT DELPERLIG VR+S L L  +
Sbjct: 684 DMAFLVQANTPDELPERLIGAVRISHLELKSA 715

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456757|ref|XP_004146115.1| PREDICTED: uncharacterized protein LOC101209463 [Cucumis sativus] gi|449509520|ref|XP_004163612.1| PREDICTED: uncharacterized LOC101209463 [Cucumis sativus]

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/92 (82%), Positives = 83/92 (90%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGS  CLLGKAVDCNY+ GPKYLE+DVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 622 KGSWIVRQSVGSMPCLLGKAVDCNYIRGPKYLEVDVDIGSSTVANGVLGLVIGVITTLVV 681

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLSQS 93
           DMAFL+QANTT+ELPERLIG VRVS + LS +
Sbjct: 682 DMAFLIQANTTEELPERLIGAVRVSHIQLSSA 713

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
TAIR|locus:2163548	719	AT5G45560 [Arabidopsis thalian	0.661	0.111	0.65	2.3e-21
TAIR|locus:2117134	724	EDR2 "ENHANCED DISEASE RESISTA	0.661	0.110	0.637	8e-21
TAIR|locus:2183705	302	AT5G10750 "AT5G10750" [Arabido	0.669	0.268	0.475	6e-16
TAIR|locus:2057547	737	AT2G28320 [Arabidopsis thalian	0.661	0.108	0.462	2.9e-14
TAIR|locus:2102465	733	AT3G54800 [Arabidopsis thalian	0.661	0.109	0.437	1.6e-13
TAIR|locus:2198866	313	AT1G06050 "AT1G06050" [Arabido	0.669	0.258	0.402	2.8e-13
TAIR|locus:2182417	811	AT5G35180 [Arabidopsis thalian	0.669	0.099	0.407	7.6e-12
TAIR|locus:2149428	294	AT5G24990 "AT5G24990" [Arabido	0.669	0.275	0.378	9e-11
TAIR|locus:2179255	269	AT5G25020 "AT5G25020" [Arabido	0.669	0.301	0.378	1.1e-10
TAIR|locus:2179245	286	AT5G25010 "AT5G25010" [Arabido	0.669	0.283	0.365	3e-10

TAIR|locus:2163548 AT5G45560 [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.3e-21, P = 2.3e-21
 Identities = 52/80 (65%), Positives = 56/80 (70%)

Query:     2 QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXXXX 61
             +GSWIVR SVGST CLLGKAVDCNY+ GP YLEIDVDIGSS                   
Sbjct:   620 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPTYLEIDVDIGSSTVANGVLGLVIGVITSLVV 679

Query:    62 DMAFLVQANTTDELPERLIG 81
             +MAFLVQANT +ELPERLIG
Sbjct:   680 EMAFLVQANTPEELPERLIG 699

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008289 "lipid binding" evidence=ISS

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2117134 EDR2 "ENHANCED DISEASE RESISTANCE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 255 (94.8 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 51/80 (63%), Positives = 55/80 (68%)

Query:     2 QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXXXX 61
             +GSWIVR SVGST CLLGKAVDCNY+ GP YLEIDVDIGSS                   
Sbjct:   625 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPTYLEIDVDIGSSTVANGVLGLVIGVITSLVV 684

Query:    62 DMAFLVQANTTDELPERLIG 81
             +MAFLVQANT +E PERLIG
Sbjct:   685 EMAFLVQANTAEEQPERLIG 704

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008289 "lipid binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2183705 AT5G10750 "AT5G10750" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 39/82 (47%), Positives = 49/82 (59%)

Query:     1 MQGSWIVRHSVGS-TTCLLGKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXX 59
             ++G W+V+ +VG+ + CLLGKA+ CNY  GP Y EIDVDI SS                 
Sbjct:   178 VKGPWVVKAAVGNYSACLLGKALTCNYHRGPNYFEIDVDISSSAIATAILRLALGYVTSV 237

Query:    60 XXDMAFLVQANTTDELPERLIG 81
               DM FL +A T +ELPERLIG
Sbjct:   238 TIDMGFLAEAQTEEELPERLIG 259

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057547 AT2G28320 [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.9e-14, P = 2.9e-14
 Identities = 37/80 (46%), Positives = 49/80 (61%)

Query:     2 QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXXXX 61
             +GSWIV+ SVG   CL+G+A++ NY  G  Y+E+ VDIGSS                   
Sbjct:   641 KGSWIVKQSVGKKACLIGQALEINYFRGKNYIELGVDIGSSTVARGVVSLVLGYLNKLVI 700

Query:    62 DMAFLVQANTTDELPERLIG 81
             +MAFL+QANT +ELPE L+G
Sbjct:   701 EMAFLIQANTEEELPEYLLG 720

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2102465 AT3G54800 [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 35/80 (43%), Positives = 48/80 (60%)

Query:     2 QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXXXX 61
             +GSWIV+ SVG   CL+G+ ++  Y  G  YLE+D+D+GSS                   
Sbjct:   638 KGSWIVKQSVGKKACLVGQVLEVCYTRGKNYLELDIDVGSSTVARGVTNLVLGYLNNLVI 697

Query:    62 DMAFLVQANTTDELPERLIG 81
             +MAFL+QANT +ELPE L+G
Sbjct:   698 EMAFLIQANTVEELPELLLG 717

GO:0005543 "phospholipid binding" evidence=IEA

GO:0007165 "signal transduction" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISS

TAIR|locus:2198866 AT1G06050 "AT1G06050" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 2.8e-13, P = 2.8e-13
 Identities = 33/82 (40%), Positives = 49/82 (59%)

Query:     1 MQGSWIVRHSVGSTT-CLLGKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXX 59
             ++G WIVR +VG    C++G+A+ C Y+ G  ++EIDVDIGSS                 
Sbjct:   160 VKGPWIVRKAVGEQAICVIGRALSCKYVSGENFVEIDVDIGSSMVASAIVHLAFGYVTTL 219

Query:    60 XXDMAFLVQANTTDELPERLIG 81
               D+AFL+++ T  ELPE+L+G
Sbjct:   220 TVDLAFLIESQTEAELPEKLLG 241

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2182417 AT5G35180 [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 7.6e-12, P = 7.6e-12
 Identities = 33/81 (40%), Positives = 45/81 (55%)

Query:     1 MQGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXXX 60
             +QG W+V+ +VG+  CLLGKAV C YL    +LEIDVDIGSS                  
Sbjct:   714 VQGYWMVKRAVGTKACLLGKAVTCKYLRQDNFLEIDVDIGSSAVARSVIGLVLGYVTSLI 773

Query:    61 XDMAFLVQANTTDELPERLIG 81
              D+A L++     +LPE ++G
Sbjct:   774 VDLAILIEGKEESDLPEYILG 794

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007165 "signal transduction" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2149428 AT5G24990 "AT5G24990" [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 9.0e-11, P = 9.0e-11
 Identities = 31/82 (37%), Positives = 43/82 (52%)

Query:     1 MQGSWIVRHSVGSTTCLL-GKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXX 59
             ++G W+V+ + G     + GKA+ C Y  G  Y E+DVDI SS                 
Sbjct:   173 VKGPWVVKAAAGKFGAFVAGKAMKCTYYRGDNYFEVDVDISSSAIMTALIRFMLGYVTYL 232

Query:    60 XXDMAFLVQANTTDELPERLIG 81
               D+ F+V+A T +ELPERLIG
Sbjct:   233 MVDIGFVVEAQTAEELPERLIG 254

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2179255 AT5G25020 "AT5G25020" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 31/82 (37%), Positives = 44/82 (53%)

Query:     1 MQGSWIVRHSVGSTTCLL-GKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXX 59
             ++G W+V+ + G     + GKA+ C+Y  G  Y E+DVDI SS                 
Sbjct:   144 VKGPWVVKAAAGKFGAFVAGKAMKCSYHRGDNYFEVDVDISSSAIMTALIRFMLGYVTYL 203

Query:    60 XXDMAFLVQANTTDELPERLIG 81
               D+ F+V+A T +ELPERLIG
Sbjct:   204 MVDIGFVVEAQTEEELPERLIG 225

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2179245 AT5G25010 "AT5G25010" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 30/82 (36%), Positives = 41/82 (50%)

Query:     1 MQGSWIVRHSVGSTTCLL-GKAVDCNYLHGPKYLEIDVDIGSSXXXXXXXXXXXXXXXXX 59
             ++G W+V+ + G     L GK V C+Y  G  Y E+DVD   S                 
Sbjct:   172 VKGPWVVKATAGKLGAFLAGKVVKCSYYRGANYFEVDVDFSISAIYSALVRLTLGYVTNL 231

Query:    60 XXDMAFLVQANTTDELPERLIG 81
               D+ F+V+A T +ELPERLIG
Sbjct:   232 VADVGFVVEAQTEEELPERLIG 253


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.140   0.456    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      121        92   0.00091  102 3  11 22  0.46    29
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  134 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.64u 0.28s 7.92t   Elapsed:  00:00:00
  Total cpu time:  7.64u 0.28s 7.92t   Elapsed:  00:00:00
  Start:  Fri May 10 07:14:13 2013   End:  Fri May 10 07:14:13 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_III000277 enhanced disease resistance protein (EDR2) (723 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	121
PLN00188	719	PLN00188, PLN00188, enhanced disease resistance pr	9e-58
pfam07059	215	pfam07059, DUF1336, Protein of unknown function (D	3e-40

>gnl|CDD|215094 PLN00188, PLN00188, enhanced disease resistance protein (EDR2); Provisional

 Score =  189 bits (481), Expect = 9e-58
 Identities = 78/90 (86%), Positives = 82/90 (91%)

Query: 2   QGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVV 61
           +GSWIVR SVGST CLLGKAVDCNY+ GPKYLEIDVDIGSSTVANGVLGLV GVITTLVV
Sbjct: 618 KGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVV 677

Query: 62  DMAFLVQANTTDELPERLIGVVRVSSLLLS 91
           DMAFLVQANT +ELPERLIG VRVS + LS
Sbjct: 678 DMAFLVQANTYEELPERLIGAVRVSHVELS 707

Length = 719

>gnl|CDD|219281 pfam07059, DUF1336, Protein of unknown function (DUF1336)

 Score =  132 bits (335), Expect = 3e-40
 Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 2   QGSWIVRHSVGSTT-CLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLV 60
           +GSWIVR  V +   CL+GKA  CNY  GP YLEIDVDIGSS++A   L L  G +T LV
Sbjct: 127 KGSWIVRQLVYNEKPCLVGKAPQCNYYRGPNYLEIDVDIGSSSIARKGLELFLGYLTNLV 186

Query: 61  VDMAFLVQANTTDELPERLIGVVRVS 86
           +D+AF +Q  T +ELPERL+G VR++
Sbjct: 187 LDLAFTIQGQTEEELPERLLGAVRLN 212

This family represents the C-terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function. Length = 215

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
PF07059	227	DUF1336: Protein of unknown function (DUF1336); In	100.0
PLN00188	719	enhanced disease resistance protein (EDR2); Provis	100.0

>PF07059 DUF1336: Protein of unknown function (DUF1336); InterPro: IPR009769 This entry represents the C terminus (approximately 250 residues) of a number of hypothetical plant proteins of unknown function

Probab=100.00  E-value=5.8e-43  Score=277.93  Aligned_cols=89  Identities=49%  Similarity=0.882  Sum_probs=87.6

Q ss_pred             CccceeEEecc-CCceeEeeceeeeeEeeCCCeEEEEEEecchHHHHHHHhhhhccceeEEEeeEEEeecCCCCccccce
Q 042418            1 MQGSWIVRHSV-GSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERL   79 (121)
Q Consensus         1 ~~GpwiVr~aV-G~kP~LlGk~l~~~Y~~G~~YlEiDvDI~sS~iAr~il~l~~g~~k~lvvD~gFvIEG~~eeELPE~L   79 (121)
                      ++||||||++| |+|||||||+++|+||+|+||+|+|||||||++||+++++|+||+|+|+|||||+|||+++|||||||
T Consensus       138 v~gpwivr~~v~~~kP~lig~~~~~~y~~g~~y~E~dvdi~ss~~a~~~~~~~~~~~~~lvvd~gf~ieg~~~~ELPE~l  217 (227)
T PF07059_consen  138 VNGPWIVRKAVYNGKPVLIGKKLQHRYFRGPNYLEIDVDIHSSYIARKVLHLVRGYLKKLVVDMGFVIEGQTEEELPERL  217 (227)
T ss_pred             cCCchhhhhhhcCCCceeecCccceEEeeCCCeEEEEEEeccHHHHHHHHHHHHhhhceEEEEEEEEecCCChhhCchhe
Confidence            57999999999 89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eceEEeCccc
Q 042418           80 IGVVRVSSLL   89 (121)
Q Consensus        80 LG~vRl~~lD   89 (121)
                      |||+|++|+|
T Consensus       218 Lg~~Rl~~id  227 (227)
T PF07059_consen  218 LGCVRLNHID  227 (227)
T ss_pred             EeEEEeeecC
Confidence            9999999998

>PLN00188 enhanced disease resistance protein (EDR2); Provisional

Probab=100.00  E-value=2.8e-42  Score=308.83  Aligned_cols=101  Identities=78%  Similarity=1.144  Sum_probs=97.8

Q ss_pred             CccceeEEeccCCceeEeeceeeeeEeeCCCeEEEEEEecchHHHHHHHhhhhccceeEEEeeEEEeecCCCCcccccee
Q 042418            1 MQGSWIVRHSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMAFLVQANTTDELPERLI   80 (121)
Q Consensus         1 ~~GpwiVr~aVG~kP~LlGk~l~~~Y~~G~~YlEiDvDI~sS~iAr~il~l~~g~~k~lvvD~gFvIEG~~eeELPE~LL   80 (121)
                      +|||||||+|||+||||+||+|+|+||+|+|||||||||+||++|++++++++||+++|+|||||+|||+++||||||||
T Consensus       617 v~GpWiVk~aVG~~p~llGk~l~~~Y~~g~nylEvdvDi~ss~va~~v~~l~~g~~~~lvvD~af~ie~~~~eELPE~ll  696 (719)
T PLN00188        617 PKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTYEELPERLI  696 (719)
T ss_pred             cCCceEEEeccCCcceEeeeecceeEecCCCeEEEEEeeccHHHHHHHHHHHHhhhhheEEEEEEEEecCChhhCchhhe
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEeCccccCccccCCCCCC
Q 042418           81 GVVRVSSLLLSQSWNQRHHHD  101 (121)
Q Consensus        81 G~vRl~~lD~~~A~~~~~~~~  101 (121)
                      ||+|++++|+++|+.+.+.++
T Consensus       697 G~~Rl~~i~~~~A~~~~~~~~  717 (719)
T PLN00188        697 GAVRVSHVELSSAIVPKLDPD  717 (719)
T ss_pred             eeEEecccchhhccccCCCCC
Confidence            999999999999998876544

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00