Citrus Sinensis ID: 042552

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVPW
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcEEcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHEEEEEHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MGEMSSFQLGVIGALFLSVASSVSIVICNKAlmsnlgfpfattlTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVPW
Flexible Loop (DISEMBL)
MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVPW
Low Complexity Region (SEG)
MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMlfgilngisigllnlslgfnsVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVPW
Disordered region (IsUnstruct)
******FQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLV**
Disordered Region (DISOPRED)
***********IGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVP*
Disordered Region (DISEMBL)
MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVPW
Disordered Region (DISPRO)
*****SFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVPW
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFFKWLVPW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	179	2.2.26 [Sep-21-2011]
Q8RXL8	357	Uncharacterized membrane	no	no	0.955	0.478	0.754	4e-60
Q9SRE4	347	UDP-galactose transporter	no	no	0.882	0.455	0.393	4e-19
Q1JQ66	313	Solute carrier family 35	yes	no	0.882	0.504	0.308	1e-15
A4IFK2	313	Solute carrier family 35	yes	no	0.882	0.504	0.314	2e-12
Q6PGC7	313	Solute carrier family 35	yes	no	0.882	0.504	0.295	9e-11
Q7Z769	313	Solute carrier family 35	yes	no	0.882	0.504	0.283	3e-10
Q9VR50	373	Solute carrier family 35	yes	no	0.776	0.372	0.283	0.0003
Q762D5	326	UDP-N-acetylglucosamine/U	no	no	0.854	0.469	0.269	0.0007
A2VE55	355	UDP-N-acetylglucosamine/U	no	no	0.865	0.436	0.279	0.0008
Q5RDC9	355	UDP-N-acetylglucosamine/U	no	no	0.804	0.405	0.275	0.0009

>sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1

 Score =  230 bits (586), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 129/171 (75%), Positives = 147/171 (85%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           M E   FQLG IGAL LSV SSVSIVICNKAL+S LGF FATTLTSWHL+VTFC+LH A 
Sbjct: 1   MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
            +  FE K  D + VM FGILNGISIGLLNLSLGFNSVGFYQMTKLAIIP TVLLETLF 
Sbjct: 61  WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           +K+FS+KI+FSL +LL+GVGIA+VTDLQLNM+G++LSLLA+VTTCV QI++
Sbjct: 121 RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMT 171

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1

 Score = 94.4 bits (233), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 99/160 (61%), Gaps = 2/160 (1%)

Query: 12  IGALFLSVASSVSIVICNKALMSN--LGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKA 69
           +GA  ++V SSV I++ NK LMS+   GF FATTLT +H   T      +       SK 
Sbjct: 15  VGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMVSNATGLSASKH 74

Query: 70  VDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIK 129
           V +  ++ F I+  ISI  +N SL  NSVGFYQ++KL++IP   +LE +   K + +++K
Sbjct: 75  VPLWELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYCKEVK 134

Query: 130 FSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
            S+ ++++GVGI +VTD+++N  G I +  A+ +T + QI
Sbjct: 135 ASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQI 174

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 91/159 (57%), Gaps = 1/159 (0%)

Query: 11  VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAV 70
           +I  L +++ SS+ IV  NK +  + GFP   TLT  H ++T+  L   Q+++ F  K++
Sbjct: 14  IIAGLLVNLLSSICIVFINKWIYVHYGFP-NMTLTLIHFVMTWLGLFICQKMDIFAPKSL 72

Query: 71  DVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKF 130
               ++L  +     +   NLSL  N++G YQ+ K+   P  + ++T++ +K FS KIK 
Sbjct: 73  RPSKILLLALSFCGFVVFTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKL 132

Query: 131 SLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
           +L  + +GV + S  D++ N++G I + L ++ T + Q+
Sbjct: 133 TLVPITLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQV 171

Putative transporter.

Danio rerio (taxid: 7955)

>sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 89/159 (55%), Gaps = 1/159 (0%)

Query: 11  VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAV 70
           +   L L++  S+ IV  NK +  + GFP   +LT  H +VT+  L+  Q+L+ F  K++
Sbjct: 14  IAAGLLLNLLVSICIVFLNKWIYVHYGFP-NMSLTLVHFVVTWLGLYVCQKLDIFAPKSL 72

Query: 71  DVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKF 130
               ++L  +     +   NLSL  N++G YQ+ K    P  ++++TL  KK FS KI+ 
Sbjct: 73  PPSKLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIVIQTLCYKKTFSTKIRL 132

Query: 131 SLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
           +L  + +GV + S  D++ N +GT+ + L ++ T + Q+
Sbjct: 133 TLIPITLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQV 171

Putative transporter.

Bos taurus (taxid: 9913)

>sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 88/159 (55%), Gaps = 1/159 (0%)

Query: 11  VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAV 70
           +   L  ++  S+ IV  NK +  + GFP   +LT  H +VT+  L+  Q+LN F  K++
Sbjct: 14  IAAGLLFNLLVSICIVFLNKWIYVHHGFP-NMSLTLVHFVVTWLGLYICQKLNIFAPKSL 72

Query: 71  DVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKF 130
            +  ++L  +     +   NLSL  N++G YQ+ K    P  + ++T + +K+FS +I+ 
Sbjct: 73  PLSKLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFWYQKRFSVRIQL 132

Query: 131 SLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
           +L  + VGV + S  D++ + +G + + L +V T + Q+
Sbjct: 133 TLIPITVGVILNSYYDVKFHSLGMVFAALGVVVTSLYQV 171

Putative transporter.

Mus musculus (taxid: 10090)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 11  VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAV 70
           +   L  ++  S+ IV  NK +    GFP   +LT  H +VT+  L+  Q+L+ F  K++
Sbjct: 14  IAAGLLFNLLVSICIVFLNKWIYVYHGFP-NMSLTLVHFVVTWLGLYICQKLDIFAPKSL 72

Query: 71  DVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKF 130
               ++L  +     +   NLSL  N++G YQ+ K    P  + ++T   +K FS +I+ 
Sbjct: 73  PPSRLLLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQL 132

Query: 131 SLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
           +L  + +GV + S  D++ N +G + + L ++ T + Q+
Sbjct: 133 TLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQV 171

Putative transporter.

Homo sapiens (taxid: 9606)

>sp|Q9VR50|S35E1_DROME Solute carrier family 35 member E1 homolog OS=Drosophila melanogaster GN=CG14621 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 16/155 (10%)

Query: 15  LFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFC--TLHAAQRLNFFE-SKAVD 71
           LF  V SS + VI    L     FPF  T+T    +V  C  TL++    N +   K  D
Sbjct: 19  LFWYVISSSNNVIGKMVLNE---FPFPMTVT----LVQLCSITLYSGPFFNLWRIRKYQD 71

Query: 72  VKTVMLFGILNGISIGLL------NLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFS 125
           +     + ++  +++G L      ++SL    V +    K  +  FTV+L  +F  ++  
Sbjct: 72  IPRPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQP 131

Query: 126 QKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLA 160
             +  SL  ++ GVGIA+VT++  +M+G I +L++
Sbjct: 132 TLVYLSLLPIITGVGIATVTEISFDMMGLISALIS 166

Putative transporter.

Drosophila melanogaster (taxid: 7227)

>sp|Q762D5|S35D2_MOUSE UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Mus musculus GN=Slc35d2 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 18/171 (10%)

Query: 11  VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAV 70
           ++ ALF    S + IV+ NKAL++  GFP    L    +  T   L+  +          
Sbjct: 16  LLSALFYGTCSFL-IVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKIIHFPDF 74

Query: 71  DVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAI----------IPFTVLLETLFL 120
           D K       + G    L  L +G +  G    +KL++          IPFT+LLE + L
Sbjct: 75  DKK-------IPGKLFPLPLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEAIIL 127

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
             Q+S  I  S+  +++G  IA+ +DL  N+ G +   L  + T    + +
Sbjct: 128 GTQYSLNIILSVLAIVLGAFIAAGSDLTFNLEGYVFVFLNDIFTAANGVYT 178

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Mus musculus (taxid: 10090)

>sp|A2VE55|S35D2_BOVIN UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Bos taurus GN=SLC35D2 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)

Query: 9   LGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFE-- 66
           L ++ A F  V SS  IV+ NK++++N  FP +  +    ++ T   L   + L   +  
Sbjct: 41  LKLLAAGFYGV-SSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFP 99

Query: 67  --SKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQF 124
              + V  KT  L  +  G  I  L  +   N   F  + + +I+ FT+  E + LKK F
Sbjct: 100 DFDRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSIL-FTMFAEGVLLKKTF 158

Query: 125 SQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTC 165
           S  IK ++F +++G  +A+ +DL  ++ G +  L+  V T 
Sbjct: 159 SWGIKMTVFAMIIGAFVAASSDLAFDLEGYVFILINDVLTA 199

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-GlcNAc, the donor substrate, and thus be involved in growth factor signaling.

Bos taurus (taxid: 9913)

>sp|Q5RDC9|S35D2_PONAB UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Pongo abelii GN=SLC35D2 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 5/149 (3%)

Query: 21  SSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFE----SKAVDVKTVM 76
           SS  IV+ NK++++N  FP +  +    ++ T   L   + L   +     + V  KT  
Sbjct: 52  SSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFP 111

Query: 77  LFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLL 136
           L  +  G  I  L  +   N   F  + + +I+ FT+  E + LKK FS  IK ++F ++
Sbjct: 112 LPLLYFGNQITGLFSTKKLNLPMFTVLRRFSIL-FTMFAEGVLLKKTFSWGIKMTVFAMI 170

Query: 137 VGVGIASVTDLQLNMVGTILSLLAIVTTC 165
           +G  +A+ +DL  ++ G +  L+  V T 
Sbjct: 171 IGAFVAASSDLAFDLEGYVFILINDVLTA 199

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
224132000	344	predicted protein [Populus trichocarpa]	0.955	0.497	0.912	4e-83
225435339	348	PREDICTED: uncharacterized membrane prot	0.955	0.491	0.918	2e-82
356550202	349	PREDICTED: uncharacterized membrane prot	0.955	0.489	0.912	3e-82
255578135	343	UDP-glucuronic acid/UDP-N-acetylgalactos	0.955	0.498	0.900	5e-82
356543480	349	PREDICTED: uncharacterized membrane prot	0.955	0.489	0.912	8e-82
255635117	196	unknown [Glycine max]	0.955	0.872	0.906	2e-81
357453963	354	Membrane protein, putative [Medicago tru	0.960	0.485	0.866	8e-80
449456018	344	PREDICTED: uncharacterized membrane prot	0.955	0.497	0.865	2e-79
186503767	342	nucleotide/sugar transporter-like protei	0.955	0.5	0.853	1e-78
297790031	342	hypothetical protein ARALYDRAFT_921025 [	0.955	0.5	0.853	1e-78

>gi|224132000|ref|XP_002328160.1| predicted protein [Populus trichocarpa] gi|222837675|gb|EEE76040.1| predicted protein [Populus trichocarpa]

 Score =  312 bits (799), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 156/171 (91%), Positives = 166/171 (97%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEM SFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ
Sbjct: 1   MGEMPSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           RLN FESK++++K VMLFGILNG+SIGLLNLSLGFNS+GFYQMTKLAIIPFTVLLETLFL
Sbjct: 61  RLNLFESKSIEMKPVMLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           KKQFSQKIK SLF+LLVGVGIASVTDLQLN VGTILSLLAI+TTCVGQI++
Sbjct: 121 KKQFSQKIKLSLFVLLVGVGIASVTDLQLNFVGTILSLLAIITTCVGQILT 171

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435339|ref|XP_002285229.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis vinifera] gi|297746270|emb|CBI16326.3| unnamed protein product [Vitis vinifera]

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 157/171 (91%), Positives = 163/171 (95%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEMS FQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLH AQ
Sbjct: 1   MGEMSGFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQ 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           R N FESK+VD+KTVMLFGILNG+SIGLLNLSLGFNS+GFYQMTKLAIIPFTVLLETLFL
Sbjct: 61  RFNVFESKSVDMKTVMLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           KKQFSQKIK SLFLLLVGV IASVTDLQLN VGTILSLLAI TTCVGQI++
Sbjct: 121 KKQFSQKIKLSLFLLLVGVAIASVTDLQLNFVGTILSLLAIATTCVGQILT 171

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550202|ref|XP_003543477.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine max]

 Score =  309 bits (792), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 156/171 (91%), Positives = 166/171 (97%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEMS+FQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ
Sbjct: 1   MGEMSNFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           RLN F SK+VD+KTVMLFGILNGISIG LNLSLGFNS+GFYQMTKLAIIPFTVLLET+FL
Sbjct: 61  RLNLFVSKSVDLKTVMLFGILNGISIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           KKQFS KIKF+LFLLLVGVGIAS+TDLQLN VGTILSLLAI+TTCVGQI++
Sbjct: 121 KKQFSSKIKFALFLLLVGVGIASITDLQLNFVGTILSLLAIITTCVGQILT 171

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578135|ref|XP_002529937.1| UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis] gi|223530567|gb|EEF32445.1| UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis]

 Score =  308 bits (789), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 154/171 (90%), Positives = 163/171 (95%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEM+SFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVT+CTLH AQ
Sbjct: 1   MGEMTSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTYCTLHCAQ 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           R N FESK +D+KTVMLFGILNG+SIGLLNLSLGFNS+GFYQMTKLAIIPFTVLLETLFL
Sbjct: 61  RFNLFESKPIDMKTVMLFGILNGVSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           KKQFSQ IK SLFLLLVGVGIASVTDLQLN +GTILSLLAI TTCVGQI++
Sbjct: 121 KKQFSQNIKLSLFLLLVGVGIASVTDLQLNFLGTILSLLAIATTCVGQILT 171

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543480|ref|XP_003540188.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine max]

 Score =  308 bits (788), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 156/171 (91%), Positives = 165/171 (96%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEMS+FQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ
Sbjct: 1   MGEMSNFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           RLN F SK+VD+KTVMLFGILNGISIG LNLSLGFNS+GFYQMTKLAIIPFTVLLET+FL
Sbjct: 61  RLNLFVSKSVDLKTVMLFGILNGISIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           KKQFS KIKFSL LLLVGVGIAS+TDLQLN VGTILSLLAI+TTCVGQI++
Sbjct: 121 KKQFSSKIKFSLSLLLVGVGIASITDLQLNFVGTILSLLAIITTCVGQILT 171

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635117|gb|ACU17916.1| unknown [Glycine max]

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/171 (90%), Positives = 165/171 (96%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEMS+FQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ
Sbjct: 1   MGEMSNFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           RLN F SK+VD+KTVMLFGILNGISIG LNLSLGFNS+GFYQMTKLAIIPFTVLLET+FL
Sbjct: 61  RLNLFVSKSVDLKTVMLFGILNGISIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           KKQF+ KIKFSL LLLVGVGIAS+TDLQLN VGTILSLLAI+TTCVGQI++
Sbjct: 121 KKQFNSKIKFSLSLLLVGVGIASITDLQLNFVGTILSLLAIITTCVGQILT 171

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453963|ref|XP_003597262.1| Membrane protein, putative [Medicago truncatula] gi|355486310|gb|AES67513.1| Membrane protein, putative [Medicago truncatula]

 Score =  301 bits (771), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 149/172 (86%), Positives = 162/172 (94%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEM  FQLGVIGALFLSVASSVSIVICNKALMS LGFPFATTLTSWHLMVTFCTLH AQ
Sbjct: 1   MGEMGKFQLGVIGALFLSVASSVSIVICNKALMSKLGFPFATTLTSWHLMVTFCTLHVAQ 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           RLN F +K++D+KT+MLFG LNG+SIG LNLSLGFNSVGFYQMTKLAIIPFTV+LET+FL
Sbjct: 61  RLNLFVTKSIDMKTIMLFGFLNGVSIGFLNLSLGFNSVGFYQMTKLAIIPFTVMLETIFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSF 172
           KKQFSQKIKF+LFLLLVGVG+AS+TDLQLN VGTI+SLLAI+TTCV QIVSF
Sbjct: 121 KKQFSQKIKFTLFLLLVGVGVASITDLQLNFVGTIISLLAIITTCVSQIVSF 172

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456018|ref|XP_004145747.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Cucumis sativus] gi|449524366|ref|XP_004169194.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Cucumis sativus]

 Score =  299 bits (766), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 148/171 (86%), Positives = 162/171 (94%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGE+SSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVT+CTLH A 
Sbjct: 1   MGEISSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTYCTLHVAH 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           RLN FESK +D KTV+LFG+LNGISIG LNLSLGFNSVGFYQMTKLAIIPFTV+LET+FL
Sbjct: 61  RLNLFESKPIDTKTVVLFGMLNGISIGFLNLSLGFNSVGFYQMTKLAIIPFTVMLETIFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
           KKQFS KI+ SLFLLLVGVGIAS+TDLQLN +GT+LSLLAI+TTCVGQI++
Sbjct: 121 KKQFSSKIRLSLFLLLVGVGIASITDLQLNFLGTVLSLLAIITTCVGQILT 171

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186503767|ref|NP_850120.3| nucleotide/sugar transporter-like protein [Arabidopsis thaliana] gi|330253012|gb|AEC08106.1| nucleotide/sugar transporter-like protein [Arabidopsis thaliana]

 Score =  297 bits (761), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 146/171 (85%), Positives = 163/171 (95%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEM S Q+GVIGALFLSVASSVSIVICNKALM+NLGFPFATTLTSWHLMVT+CTLH A 
Sbjct: 1   MGEMKSMQMGVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAY 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           +LNFFE+K +D++TV+LFG+LNGISIGLLNLSLGFNS+GFYQMTKLAIIPFTVLLETLFL
Sbjct: 61  KLNFFENKPIDMRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
            K+FSQKIKFSLFLLLVGVGIAS+TDLQLN VG++LSLLAI TTCVGQI++
Sbjct: 121 NKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILT 171

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297790031|ref|XP_002862929.1| hypothetical protein ARALYDRAFT_921025 [Arabidopsis lyrata subsp. lyrata] gi|297308706|gb|EFH39188.1| hypothetical protein ARALYDRAFT_921025 [Arabidopsis lyrata subsp. lyrata]

 Score =  297 bits (760), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 146/171 (85%), Positives = 162/171 (94%)

Query: 1   MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
           MGEM S Q+GVIGALFLSVASSVSIVICNKALM+NLGFPFATTLTSWHLMVT+CTLH A 
Sbjct: 1   MGEMKSMQMGVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAY 60

Query: 61  RLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL 120
           +LNFFE+K +DV+TV+LFG+LNGISIGLLNLSLGFNS+GFYQMTKLAIIPFTVLLETLF 
Sbjct: 61  KLNFFENKPIDVRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFF 120

Query: 121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
            K+FSQKIKFSLFLLLVGVGIAS+TDLQLN VG++LSLLAI TTCVGQI++
Sbjct: 121 NKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILT 171

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
TAIR|locus:504955965	342	AT2G28315 [Arabidopsis thalian	0.955	0.5	0.736	3.8e-62
TAIR|locus:2033097	357	AT1G06890 [Arabidopsis thalian	0.955	0.478	0.637	1.1e-50
TAIR|locus:2064316	353	AT2G30460 "AT2G30460" [Arabido	0.955	0.484	0.614	2.8e-50
TAIR|locus:2162271	350	AT5G42420 [Arabidopsis thalian	0.888	0.454	0.341	2.1e-20
TAIR|locus:2199557	348	AT1G21070 [Arabidopsis thalian	0.882	0.454	0.337	4.4e-20
TAIR|locus:2118514	335	AT4G09810 [Arabidopsis thalian	0.865	0.462	0.341	9.2e-20
TAIR|locus:2009076	335	AT1G34020 [Arabidopsis thalian	0.865	0.462	0.335	2.5e-19
TAIR|locus:2030076	347	AT1G76670 [Arabidopsis thalian	0.882	0.455	0.331	2.5e-19
TAIR|locus:2122467	337	NST-K1 "nucleotide sugar trans	0.877	0.465	0.305	2.9e-17
ZFIN|ZDB-GENE-041210-186	317	slc35e3 "solute carrier family	0.882	0.498	0.276	4.9e-16

TAIR|locus:504955965 AT2G28315 [Arabidopsis thaliana (taxid:3702)]

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 126/171 (73%), Positives = 142/171 (83%)

Query:     1 MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
             MGEM S Q+GVIGALFLSVASSVSIVICNKALM+NLGFPFATTLTSWHLMVT+CTLH A 
Sbjct:     1 MGEMKSMQMGVIGALFLSVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAY 60

Query:    61 RLNFFESKAVDVKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFL 120
             +LNFFE+K +D++TV+                     +GFYQMTKLAIIPFTVLLETLFL
Sbjct:    61 KLNFFENKPIDMRTVVLFGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFL 120

Query:   121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
              K+FSQKIKFSLFLLLVGVGIAS+TDLQLN VG++LSLLAI TTCVGQI++
Sbjct:   121 NKKFSQKIKFSLFLLLVGVGIASITDLQLNFVGSVLSLLAIATTCVGQILT 171

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2033097 AT1G06890 [Arabidopsis thaliana (taxid:3702)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 109/171 (63%), Positives = 127/171 (74%)

Query:     1 MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
             M E   FQLG IGAL LSV SSVSIVICNKAL+S LGF FATTLTSWHL+VTFC+LH A 
Sbjct:     1 MSEGQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query:    61 RLNFFESKAVDVKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFL 120
              +  FE K  D + VM                     VGFYQMTKLAIIP TVLLETLF 
Sbjct:    61 WMKMFEHKPFDPRAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFF 120

Query:   121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
             +K+FS+KI+FSL +LL+GVGIA+VTDLQLNM+G++LSLLA+VTTCV QI++
Sbjct:   121 RKKFSRKIQFSLTILLLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQIMT 171

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2064316 AT2G30460 "AT2G30460" [Arabidopsis thaliana (taxid:3702)]

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 105/171 (61%), Positives = 127/171 (74%)

Query:     1 MGEMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ 60
             M +   FQLG IGAL LSV SSVSIVICNKAL+S LGF FATTLTSWHL+VTFC+LH A 
Sbjct:     1 MSDAQKFQLGTIGALSLSVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVAL 60

Query:    61 RLNFFESKAVDVKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFL 120
              + FFE K  D + V+                     VGFYQMTKLAIIP TV+LET+F 
Sbjct:    61 WMKFFEHKPFDPRAVLGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFF 120

Query:   121 KKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVS 171
             +K FS+KI+FSL +LL+GVGIA+VTDLQLNM+G++LSLLA++TTCV QI++
Sbjct:   121 RKMFSRKIQFSLVILLLGVGIATVTDLQLNMLGSVLSLLAVITTCVAQIMT 171

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2162271 AT5G42420 [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 55/161 (34%), Positives = 93/161 (57%)

Query:    12 IGALFLSVASSVSIVICNKALMSNLGFPF--ATTLTSWHLMVTFCTLHAAQRLNFFESKA 69
             +GA  ++V SSV I++ NK LMS+ GF F  ATTLT +H  +T      +    F  SK 
Sbjct:    16 MGAWAMNVISSVGIIMANKQLMSSSGFAFSFATTLTGFHFALTALVGMVSNATGFSASKH 75

Query:    70 VDVKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIK 129
             V +  ++                     VGFYQ++KL++IP   ++E +   K++S+++K
Sbjct:    76 VPMWELIWFSIVANVSIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHSKRYSREVK 135

Query:   130 FSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIV 170
              S+ +++VGVGI +VTD+++N  G I + +AI ++ + QI+
Sbjct:   136 ISVVVVVVGVGICTVTDVKVNAKGFICACVAIFSSSLQQIL 176

GO:0005886 "plasma membrane" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2199557 AT1G21070 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 54/160 (33%), Positives = 89/160 (55%)

Query:    12 IGALFLSVASSVSIVICNKALMSN--LGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKA 69
             +GA  ++V SSV I++ NK LMS+   GF FATTLT +H  +T      +       SK 
Sbjct:    16 VGAWAMNVTSSVGIIMANKQLMSSSGFGFSFATTLTGFHFALTALVGMVSNATGLSASKH 75

Query:    70 VDVKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIK 129
             V +  ++                     VGFYQ++KL++IP   ++E +   K +S+++K
Sbjct:    76 VPLWELLWFSLVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWVLHSKHYSREVK 135

Query:   130 FSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
              S+ +++VGVGI +VTD+++N  G I +  A+ +T + QI
Sbjct:   136 ASVMVVVVGVGICTVTDVKVNAKGFICACTAVFSTSLQQI 175

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2118514 AT4G09810 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 53/155 (34%), Positives = 83/155 (53%)

Query:    14 ALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVK 73
             A   +V +SV I+I NKALM+  GF FATTLT  H   T       + L + +   +   
Sbjct:    17 AWMFNVVTSVGIIIVNKALMATYGFSFATTLTGLHFATTTLMTLVLRCLGYIQPSHLPFT 76

Query:    74 TVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLF 133
              ++                     VGFYQ+ KL++IP + LLE +F K ++S+  K S+ 
Sbjct:    77 ELLKFILFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDKIRYSRDTKLSIG 136

Query:   134 LLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQ 168
             L+LVGVG+ +VTD+ +N  G + + +A+ +T + Q
Sbjct:   137 LVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQ 171

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2009076 AT1G34020 [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 52/155 (33%), Positives = 83/155 (53%)

Query:    14 ALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVK 73
             A   +V +SV I+I NKALM+  G+ FATTLT  H   T       + L + +   +   
Sbjct:    17 AWMFNVVTSVGIIIVNKALMATYGYSFATTLTGLHFATTTLMTLVLRCLGYIQPSHLPFT 76

Query:    74 TVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLF 133
              ++                     VGFYQ+ KL++IP + LLE +F K ++S+  K S+ 
Sbjct:    77 ELLRFILFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEMVFDKIRYSRDTKLSIG 136

Query:   134 LLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQ 168
             L+LVGVG+ +VTD+ +N  G + + +A+ +T + Q
Sbjct:   137 LVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQ 171

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2030076 AT1G76670 [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 53/160 (33%), Positives = 87/160 (54%)

Query:    12 IGALFLSVASSVSIVICNKALMSN--LGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKA 69
             +GA  ++V SSV I++ NK LMS+   GF FATTLT +H   T      +       SK 
Sbjct:    15 VGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMVSNATGLSASKH 74

Query:    70 VDVKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIK 129
             V +  ++                     VGFYQ++KL++IP   +LE +   K + +++K
Sbjct:    75 VPLWELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYCKEVK 134

Query:   130 FSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
              S+ ++++GVGI +VTD+++N  G I +  A+ +T + QI
Sbjct:   135 ASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQI 174

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2122467 NST-K1 "nucleotide sugar transporter-KT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 48/157 (30%), Positives = 80/157 (50%)

Query:    12 IGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVD 71
             I +   +V +SV I++ NKALM+  GF FATTLT  H   T         L + +   + 
Sbjct:    20 IASWLFNVVTSVGIILVNKALMATYGFSFATTLTGLHFGTTTLLTTFLTWLGYIQPSQLP 79

Query:    72 VKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFS 131
                ++                     VGFYQ+ KL++IP + LLE +    ++S+  K S
Sbjct:    80 WPDLLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVMLDNVRYSRDTKLS 139

Query:   132 LFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQ 168
             + L+L GV + +VTD+ +N+ G + + +A+ +T + Q
Sbjct:   140 ILLVLAGVAVCTVTDVSVNLNGFLAAAIAVWSTALQQ 176

GO:0005886 "plasma membrane" evidence=ISM

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

ZFIN|ZDB-GENE-041210-186 slc35e3 "solute carrier family 35, member E3" [Danio rerio (taxid:7955)]

 Score = 201 (75.8 bits), Expect = 4.9e-16, P = 4.9e-16
 Identities = 44/159 (27%), Positives = 82/159 (51%)

Query:    11 VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAV 70
             +I  L +++ SSV IV  NK +  + GFP   TLT  H ++T+  L   Q+++ F  K++
Sbjct:    18 IIAGLLVNLLSSVCIVFINKWIYVHYGFP-NMTLTLIHFVMTWLGLFICQKMDIFAPKSL 76

Query:    71 DVKTVMXXXXXXXXXXXXXXXXXXXXXVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKF 130
                 ++                     +G YQ+ K+   P  + ++T++ +K FS KIK 
Sbjct:    77 RPSKILLLALSFCGFVVFTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRKTFSTKIKL 136

Query:   131 SLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQI 169
             +L  + +GV + S  D++ N++G I + L ++ T + Q+
Sbjct:   137 TLVPITLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQV 175

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.97
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.93
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.89
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.84
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.83
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.83
KOG1582	367	consensus UDP-galactose transporter related protei	99.58
KOG1581	327	consensus UDP-galactose transporter related protei	99.42
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.29
KOG1580	337	consensus UDP-galactose transporter related protei	99.23
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.22
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.19
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.17
PRK11689	295	aromatic amino acid exporter; Provisional	99.15
PRK11272	292	putative DMT superfamily transporter inner membran	99.13
PRK15430	296	putative chloramphenical resistance permease RarD;	99.11
PLN00411	358	nodulin MtN21 family protein; Provisional	99.06
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.97
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.96
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.96
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.89
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.87
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.73
KOG2765	416	consensus Predicted membrane protein [Function unk	98.69
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.48
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.47
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.37
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.28
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.07
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.98
COG2510	140	Predicted membrane protein [Function unknown]	97.78
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.76
PRK11272	292	putative DMT superfamily transporter inner membran	97.67
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.64
PLN00411	358	nodulin MtN21 family protein; Provisional	97.52
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.5
KOG2766	336	consensus Predicted membrane protein [Function unk	97.43
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.38
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.32
PRK11689	295	aromatic amino acid exporter; Provisional	97.3
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.25
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.18
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.07
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.07
PRK15430	296	putative chloramphenical resistance permease RarD;	96.97
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.91
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	96.77
PRK11431	105	multidrug efflux system protein; Provisional	96.76
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.75
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.74
COG2076	106	EmrE Membrane transporters of cations and cationic	96.63
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.61
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.6
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.58
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.47
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	96.28
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.07
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	95.98
COG2962	293	RarD Predicted permeases [General function predict	95.69
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.44
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.02
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.39
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.21
COG2962	293	RarD Predicted permeases [General function predict	90.63
KOG2922	335	consensus Uncharacterized conserved protein [Funct	89.47
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	88.6
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	82.59
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	82.54
PRK13499	345	rhamnose-proton symporter; Provisional	81.49

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=5.8e-32  Score=221.59  Aligned_cols=172  Identities=33%  Similarity=0.446  Sum_probs=163.0

Q ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCc----cchhHHHHH
Q 042552            3 EMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKA----VDVKTVMLF   78 (179)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~----~~~~~~lp~   78 (179)
                      +++++..+...+...|+.+|++.++.||+++++++||||+++|.+|..++++...+.+..+..++++    .+++.++|+
T Consensus        10 ~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl   89 (316)
T KOG1441|consen   10 GQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPL   89 (316)
T ss_pred             cccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHH
Confidence            4667788889999999999999999999999999999999999999999999999999888877655    678999999


Q ss_pred             HHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHH
Q 042552           79 GILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSL  158 (179)
Q Consensus        79 ~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l  158 (179)
                      |++++++++++|.|++|+||||+|++|+++||+++++++++.+|+++..+++++.+++.||++++.+|.+||+.|++.++
T Consensus        90 ~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~  169 (316)
T KOG1441|consen   90 GLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAM  169 (316)
T ss_pred             HHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHccc
Q 042552          159 LAIVTTCVGQIVSFFK  174 (179)
Q Consensus       159 ~s~~~~a~~~i~~~~k  174 (179)
                      .+.+.+++++|+.++.
T Consensus       170 ~s~~~~al~~I~~~~l  185 (316)
T KOG1441|consen  170 ISNLAFALRNILSKKL  185 (316)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998543

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=1e-27  Score=193.83  Aligned_cols=173  Identities=23%  Similarity=0.240  Sum_probs=164.2

Q ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCccch---hHHHHHH
Q 042552            3 EMSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDV---KTVMLFG   79 (179)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~---~~~lp~~   79 (179)
                      |..+++.+...+.+.|+.+|+.+++.||+++++|+||..+++...|.+.+.++.++.++.|.++.|++++   |+++|++
T Consensus         5 ~~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~   84 (314)
T KOG1444|consen    5 EGSKKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVS   84 (314)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHH
Confidence            5667788889999999999999999999999999988888888899999999999999999998887664   7899999


Q ss_pred             HHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHHH
Q 042552           80 ILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLL  159 (179)
Q Consensus        80 l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l~  159 (179)
                      +.+.+++.++..|++|+|+|+++++|+.+|..+++.|..++|++++++.+.++..+.+|......+|.++|..|+.|+..
T Consensus        85 ~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~  164 (314)
T KOG1444|consen   85 LLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALA  164 (314)
T ss_pred             HHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHcccc
Q 042552          160 AIVTTCVGQIVSFFKW  175 (179)
Q Consensus       160 s~~~~a~~~i~~~~k~  175 (179)
                      +++.++.+.++.|||.
T Consensus       165 n~~~~a~~~v~~kk~v  180 (314)
T KOG1444|consen  165 NCLTTAAFVVYVKKSV  180 (314)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999998874

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=1.7e-26  Score=193.42  Aligned_cols=167  Identities=23%  Similarity=0.244  Sum_probs=149.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccC-----ccchhHHHHHHH
Q 042552            6 SFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESK-----AVDVKTVMLFGI   80 (179)
Q Consensus         6 ~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~-----~~~~~~~lp~~l   80 (179)
                      .+..+....++.|+.+|+..++.||+++++  +|||++++.+|++++++.+.+....+..+.+     +.++++++|+|+
T Consensus        45 ~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl  122 (350)
T PTZ00343         45 NFKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGL  122 (350)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999984  7899999999999998877666554433322     235678999999


Q ss_pred             HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHHHH
Q 042552           81 LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLA  160 (179)
Q Consensus        81 ~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l~s  160 (179)
                      ++.......|.|+++.|++++|++|+++|.++++++++++|||++++++++++++++|+++++.+|.++++.|.+++++|
T Consensus       123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s  202 (350)
T PTZ00343        123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLS  202 (350)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHH
Confidence            98887778899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHccc
Q 042552          161 IVTTCVGQIVSFFK  174 (179)
Q Consensus       161 ~~~~a~~~i~~~~k  174 (179)
                      .++.|+|+++.|+.
T Consensus       203 ~~~~a~~~i~~k~~  216 (350)
T PTZ00343        203 NLGSSLRSIFAKKT  216 (350)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998653

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.93  E-value=2.2e-25  Score=182.89  Aligned_cols=163  Identities=25%  Similarity=0.220  Sum_probs=146.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCc---cCccchhHHHHHHHHHHHH
Q 042552            9 LGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFE---SKAVDVKTVMLFGILNGIS   85 (179)
Q Consensus         9 ~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~---~~~~~~~~~lp~~l~~~~~   85 (179)
                      +++...++.|+++|++++++||++++  .|++|.++++.|+.++++.+.+.+..+..+   .++.+++.++|.|++++.+
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   78 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIG   78 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            36788999999999999999999998  478999999999999998887775433222   2445678899999999999


Q ss_pred             hhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHHHHHHHHH
Q 042552           86 IGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTC  165 (179)
Q Consensus        86 ~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l~s~~~~a  165 (179)
                      ..++|.|++|.|++++|++|+++|+++++++++++|||++++++.++++.++|+++...+|.+++..|..+++++.++.|
T Consensus        79 ~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a  158 (302)
T TIGR00817        79 HVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFV  158 (302)
T ss_pred             HHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999998877788889999999999999999


Q ss_pred             HHHHHHcc
Q 042552          166 VGQIVSFF  173 (179)
Q Consensus       166 ~~~i~~~~  173 (179)
                      +|+++.|+
T Consensus       159 ~~~v~~k~  166 (302)
T TIGR00817       159 SRNIFSKK  166 (302)
T ss_pred             HHHHHHHH
Confidence            99999865

specificities overlap.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.89  E-value=1e-22  Score=163.58  Aligned_cols=162  Identities=23%  Similarity=0.323  Sum_probs=141.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCC-ccC---ccch----hHHHHH
Q 042552            7 FQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFF-ESK---AVDV----KTVMLF   78 (179)
Q Consensus         7 ~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~-~~~---~~~~----~~~lp~   78 (179)
                      ++..+++.++.||.+|+++.++||+.-.  +|+||++++.+|+++-+++....++.... .++   ..+|    |++.|.
T Consensus        13 ~rV~~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt   90 (349)
T KOG1443|consen   13 NRVLTLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT   90 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence            4566788899999999999999999976  57889999999999999988776553221 222   3444    566799


Q ss_pred             HHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHH
Q 042552           79 GILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSL  158 (179)
Q Consensus        79 ~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l  158 (179)
                      +++.+.++.++|+|++|+++++|+|.|++++.++.+++..+.-||+++.-.+.+.++..|+++.++++.++|..|+.+..
T Consensus        91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~  170 (349)
T KOG1443|consen   91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVL  170 (349)
T ss_pred             hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHH
Confidence            99999999999999999999999999999999998888888889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 042552          159 LAIVTTCVGQIV  170 (179)
Q Consensus       159 ~s~~~~a~~~i~  170 (179)
                      .++++.++.-.+
T Consensus       171 ~aS~~sGlRW~~  182 (349)
T KOG1443|consen  171 AASLLSGLRWAF  182 (349)
T ss_pred             HHHHhhhhhHHH
Confidence            999999875443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.84  E-value=2.9e-21  Score=149.54  Aligned_cols=169  Identities=20%  Similarity=0.186  Sum_probs=155.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHHHHHHHhh
Q 042552            8 QLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIG   87 (179)
Q Consensus         8 ~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l~~~~~~~   87 (179)
                      +.....+++.|+.+|+.+++.||+++++.||+....+.+.|-+.+.+.+.+.|+.|..+.+..+.|+|+|.+++-..+++
T Consensus         4 a~s~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIy   83 (309)
T COG5070           4 AVSELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIY   83 (309)
T ss_pred             ccccchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHH
Confidence            33446788999999999999999999999999999999999999999999999999988888889999999999999999


Q ss_pred             hcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccch-------HHHHHHHHHH
Q 042552           88 LLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLN-------MVGTILSLLA  160 (179)
Q Consensus        88 ~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~-------~~G~~~~l~s  160 (179)
                      .+..|++|.++|.|+++|+.+.++++..|..++|+|.+..+..+.+++++...++..+|.+-.       -.|+.|+..+
T Consensus        84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~N  163 (309)
T COG5070          84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTN  163 (309)
T ss_pred             hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehh
Confidence            999999999999999999999999999999999999999999999999999999999998532       2599999999


Q ss_pred             HHHHHHHHHHHccccc
Q 042552          161 IVTTCVGQIVSFFKWL  176 (179)
Q Consensus       161 ~~~~a~~~i~~~~k~~  176 (179)
                      ++.+|.+..-.|+|+=
T Consensus       164 clssaafVL~mrkri~  179 (309)
T COG5070         164 CLSSAAFVLIMRKRIK  179 (309)
T ss_pred             hHhHHHHHHHHHHhhc
Confidence            9999999888877653

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.83  E-value=1.4e-21  Score=155.14  Aligned_cols=167  Identities=23%  Similarity=0.293  Sum_probs=146.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCchHHHHHHHHHHHHHHHHHHHHH-----cCCCccCccc-----hh
Q 042552            6 SFQLGVIGALFLSVASSVSIVICNKALMSN--LGFPFATTLTSWHLMVTFCTLHAAQR-----LNFFESKAVD-----VK   73 (179)
Q Consensus         6 ~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~--~~f~~p~~lt~~q~~~~~~~~~i~~~-----~~~~~~~~~~-----~~   73 (179)
                      ++..++......|..+|+++++.||++++.  ...+-|.+.++.|.+.+..++...++     .+.++.++.+     .+
T Consensus        24 ~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r  103 (347)
T KOG1442|consen   24 ANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATAR  103 (347)
T ss_pred             HhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHH
Confidence            345567778889999999999999999996  45678999999999999988877543     2344444433     47


Q ss_pred             HHHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecC---ccch
Q 042552           74 TVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTD---LQLN  150 (179)
Q Consensus        74 ~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d---~~~~  150 (179)
                      +++|+++.+..++.++|.+|+|++++||++-|+.+.|+++++.|+++|+|.+.....++.++++|.-+..-.|   ..++
T Consensus       104 ~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls  183 (347)
T KOG1442|consen  104 QVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLS  183 (347)
T ss_pred             hhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccc
Confidence            8999999999999999999999999999999999999999999999999999999999999999987776666   5689


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHc
Q 042552          151 MVGTILSLLAIVTTCVGQIVSF  172 (179)
Q Consensus       151 ~~G~~~~l~s~~~~a~~~i~~~  172 (179)
                      +.|.++++.++++.|+..+++|
T Consensus       184 ~~GvifGVlaSl~vAlnaiytk  205 (347)
T KOG1442|consen  184 WIGVIFGVLASLAVALNAIYTK  205 (347)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999995

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.83  E-value=2.6e-19  Score=147.20  Aligned_cols=155  Identities=21%  Similarity=0.196  Sum_probs=131.9

Q ss_pred             HHHHHHHHHHHHHhhccCCC-chHHHHHHHHHHHHHHHHHHHHHcCC-CccCccchhHHHHHHHHHHHHhhhcccccccc
Q 042552           19 VASSVSIVICNKALMSNLGF-PFATTLTSWHLMVTFCTLHAAQRLNF-FESKAVDVKTVMLFGILNGISIGLLNLSLGFN   96 (179)
Q Consensus        19 ~~~S~~~~~~NK~ll~~~~f-~~p~~lt~~q~~~~~~~~~i~~~~~~-~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~   96 (179)
                      +.+-..-.+++|.+.+.... ++|.++++.|+.++.+...+...... .++++.++++.++.++++.++..++|.|++|+
T Consensus         9 ~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen    9 FGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            33334455777777775444 48999999999999998887755443 55677889999999999999999999999999


Q ss_pred             hhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCcc----ch------HHHHHHHHHHHHHHHH
Q 042552           97 SVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQ----LN------MVGTILSLLAIVTTCV  166 (179)
Q Consensus        97 sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~----~~------~~G~~~~l~s~~~~a~  166 (179)
                      |+|++++.|++.|+.+++++++++|||++.+++++++++++|++++..+|.+    .+      ..|+.+.+++.+++|+
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~  168 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAF  168 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999887642    11      2399999999999999


Q ss_pred             HHHHHcc
Q 042552          167 GQIVSFF  173 (179)
Q Consensus       167 ~~i~~~~  173 (179)
                      +.++.||
T Consensus       169 ~~~~qe~  175 (303)
T PF08449_consen  169 TGVYQEK  175 (303)
T ss_pred             HHHHHHH
Confidence            9988754

; GO: 0055085 transmembrane transport

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.58  E-value=9.8e-15  Score=116.28  Aligned_cols=150  Identities=17%  Similarity=0.156  Sum_probs=130.2

Q ss_pred             HHHHHHHHHHhhccCCCc-hHHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHHHHHHHhhhcccccccchhhH
Q 042552           22 SVSIVICNKALMSNLGFP-FATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGF  100 (179)
Q Consensus        22 S~~~~~~NK~ll~~~~f~-~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~sv~~  100 (179)
                      =+.--...+++++..+|+ |.+.+|+.|+++-....++.+..-.-+++..|||....++.+..+++.++|.|+.|.+.|.
T Consensus        55 Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPt  134 (367)
T KOG1582|consen   55 YLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPT  134 (367)
T ss_pred             HHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccCcH
Confidence            344456889999999996 9999999999998777766543323345567899999999999999999999999999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCc----cchHHHHHHHHHHHHHHHHHHHHH
Q 042552          101 YQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDL----QLNMVGTILSLLAIVTTCVGQIVS  171 (179)
Q Consensus       101 ~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~----~~~~~G~~~~l~s~~~~a~~~i~~  171 (179)
                      +.++|++..+.+++.+.++-|+|+++..+.+..++++|.+.++..|.    +||..|+.+...+.+++|+-.-.-
T Consensus       135 QviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQ  209 (367)
T KOG1582|consen  135 QVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQ  209 (367)
T ss_pred             HHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHH
Confidence            99999998888888999999999999999999999999999988875    689999999999999999854443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.42  E-value=9.7e-12  Score=100.51  Aligned_cols=147  Identities=16%  Similarity=0.103  Sum_probs=123.0

Q ss_pred             HHHHHHHhhc------cCCCchHHHHHHHHHHHHHHHHHHHHH-cCCCccCccchhHHHHHHHHHHHHhhhcccccccch
Q 042552           25 IVICNKALMS------NLGFPFATTLTSWHLMVTFCTLHAAQR-LNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNS   97 (179)
Q Consensus        25 ~~~~NK~ll~------~~~f~~p~~lt~~q~~~~~~~~~i~~~-~~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~s   97 (179)
                      .-.+++.+.+      ..+|+.|.++.++|-+.+.+..+.... .+.....+.++++..-.++....+..++..||+|+|
T Consensus        29 ~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvS  108 (327)
T KOG1581|consen   29 WGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVS  108 (327)
T ss_pred             HHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhcc
Confidence            3345555544      247888999999999999998877633 333234556788999999999999999999999999


Q ss_pred             hhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCc---------cchHHHHHHHHHHHHHHHHHH
Q 042552           98 VGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDL---------QLNMVGTILSLLAIVTTCVGQ  168 (179)
Q Consensus        98 v~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~---------~~~~~G~~~~l~s~~~~a~~~  168 (179)
                      .|.+.+.|++..+.+++.+.+++|+|++..++++..++.+|+.++..++.         +.++.|+.++..+.+++++.+
T Consensus       109 yPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn  188 (327)
T KOG1581|consen  109 YPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTN  188 (327)
T ss_pred             chHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHH
Confidence            99999999999999999999999999999999999999999999877532         367899999999999998865


Q ss_pred             HHH
Q 042552          169 IVS  171 (179)
Q Consensus       169 i~~  171 (179)
                      -+-
T Consensus       189 ~tQ  191 (327)
T KOG1581|consen  189 ATQ  191 (327)
T ss_pred             hHH
Confidence            543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.29  E-value=1.9e-10  Score=95.74  Aligned_cols=149  Identities=19%  Similarity=0.269  Sum_probs=116.5

Q ss_pred             HHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHH--HHHcC---CCccCccchhHHHHHHHHHHHHhhhcccccccchh
Q 042552           24 SIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHA--AQRLN---FFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSV   98 (179)
Q Consensus        24 ~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i--~~~~~---~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~sv   98 (179)
                      +....+..+-++ |++.|.+-++..+..-.++...  ..+.+   ..+..+.++++.+.++++-...-.+.+.|++|.|+
T Consensus        27 ~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsv  105 (334)
T PF06027_consen   27 GTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSV  105 (334)
T ss_pred             hHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccH
Confidence            334455565554 7888888887777655443322  11111   12223456777888899888888899999999999


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCcc---------chHHHHHHHHHHHHHHHHHHH
Q 042552           99 GFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQ---------LNMVGTILSLLAIVTTCVGQI  169 (179)
Q Consensus        99 ~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~---------~~~~G~~~~l~s~~~~a~~~i  169 (179)
                      +..|++++.+.|++++++++++|+|+++.+++++++.++|+.+....|..         -...|=++++.+.+++|++++
T Consensus       106 tS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV  185 (334)
T PF06027_consen  106 TSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNV  185 (334)
T ss_pred             hHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999887776532         247899999999999999999


Q ss_pred             HHcc
Q 042552          170 VSFF  173 (179)
Q Consensus       170 ~~~~  173 (179)
                      +.|+
T Consensus       186 ~~E~  189 (334)
T PF06027_consen  186 LEEK  189 (334)
T ss_pred             HHHH
Confidence            8753

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.23  E-value=1.4e-11  Score=96.64  Aligned_cols=131  Identities=15%  Similarity=0.109  Sum_probs=111.4

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHH-cCCCccCccchhHHHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHH
Q 042552           36 LGFPFATTLTSWHLMVTFCTLHAAQR-LNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVL  114 (179)
Q Consensus        36 ~~f~~p~~lt~~q~~~~~~~~~i~~~-~~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~  114 (179)
                      .+|.|...+.++|+.+..+..-+.-. ++..+.++.+.+.....++.+.+.++.+|.++||+|.|...+-|++.|+.+++
T Consensus        48 E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi  127 (337)
T KOG1580|consen   48 EKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI  127 (337)
T ss_pred             heehHHHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence            35889999999999999998865432 33345566677888999999999999999999999999999999999999999


Q ss_pred             HHHHHhccccChhhhhHHhHhhhhheeeeecCcc-------chHHHHHHHHHHHHHHHH
Q 042552          115 LETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQ-------LNMVGTILSLLAIVTTCV  166 (179)
Q Consensus       115 ~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~-------~~~~G~~~~l~s~~~~a~  166 (179)
                      ++..+.+|++++++++++.++++|++++.+.|.+       ..-.|=.+.++|...+.+
T Consensus       128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGl  186 (337)
T KOG1580|consen  128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGL  186 (337)
T ss_pred             eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhccc
Confidence            9999999999999999999999999999887543       235677888888777654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.22  E-value=3.5e-10  Score=90.31  Aligned_cols=142  Identities=16%  Similarity=0.155  Sum_probs=115.5

Q ss_pred             HHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHH-HHHHHhhhcccccccchhhHHHHHh
Q 042552           27 ICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGI-LNGISIGLLNLSLGFNSVGFYQMTK  105 (179)
Q Consensus        27 ~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l-~~~~~~~~~n~sl~~~sv~~~~i~k  105 (179)
                      ...|+.+++ ..| |..+++.|++.+.+.+.+..+.+   +++.+++..+..+. .+.....+.+.|++|.|.+...++.
T Consensus         6 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~   80 (260)
T TIGR00950         6 VVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLL   80 (260)
T ss_pred             HHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHH
Confidence            467888874 445 89999999999888776653333   23334555556654 5677888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeec-CccchHHHHHHHHHHHHHHHHHHHHHcc
Q 042552          106 LAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVT-DLQLNMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~-d~~~~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                      +..|.++.+++.+++|||++++++.++.+..+|+.+...+ +.+.+..|..+++.+.++.+.+.++.|+
T Consensus        81 ~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~  149 (260)
T TIGR00950        81 YLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKR  149 (260)
T ss_pred             hhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhH
Confidence            9999999999999999999999999999999998775443 3456788999999999999999999865

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.19  E-value=2.9e-11  Score=96.67  Aligned_cols=149  Identities=15%  Similarity=0.136  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH-HHcCCCccCccchhHHHHHHHHHHHHhhhcccccccc-hhh
Q 042552           22 SVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA-QRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFN-SVG   99 (179)
Q Consensus        22 S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~-~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~-sv~   99 (179)
                      ..+-+..=+.+.++.. .....+|+.||++.++-..+. .+++..+ ++.+.|........|-..-+++|.+++++ |+|
T Consensus        15 Ccsnvv~lE~L~~~~p-gsgNLITFaqFlFia~eGlif~skf~~~k-~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~P   92 (330)
T KOG1583|consen   15 CCSNVVFLELLVRNEP-GSGNLITFAQFLFIATEGLIFTSKFFTVK-PKIPLKDYAITVAMFFIVNVTNNYALKFNIPMP   92 (330)
T ss_pred             hhchHHHHHHHHHhCC-CCeeehHHHHHHHHHHhceeeeccccccC-CCCchhhhheehheeeeeeeeccceeeecccce
Confidence            3334455567776432 246899999999988876665 4455544 78888887766655555556999999987 999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeec---Ccc--------------ch--HHHHHHHHHH
Q 042552          100 FYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVT---DLQ--------------LN--MVGTILSLLA  160 (179)
Q Consensus       100 ~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~---d~~--------------~~--~~G~~~~l~s  160 (179)
                      .|.++|+.++..+++.++++.|||+|.+++.|+.++++|+++++..   |.+              +.  ..|+.+..++
T Consensus        93 lHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~a  172 (330)
T KOG1583|consen   93 LHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFA  172 (330)
T ss_pred             EEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998763   211              11  3688888999


Q ss_pred             HHHHHHHHHHHc
Q 042552          161 IVTTCVGQIVSF  172 (179)
Q Consensus       161 ~~~~a~~~i~~~  172 (179)
                      .+.+|...++.|
T Consensus       173 l~~sa~mgiyqE  184 (330)
T KOG1583|consen  173 LLLSAYMGIYQE  184 (330)
T ss_pred             HHHHHHHHHHHH
Confidence            999987666554

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.17  E-value=2.2e-09  Score=88.08  Aligned_cols=157  Identities=17%  Similarity=0.161  Sum_probs=114.3

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHHHH-H
Q 042552            5 SSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILN-G   83 (179)
Q Consensus         5 ~~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l~~-~   83 (179)
                      |++....+.....|-.....+    |..++  +++ |..+.++|+.++.+.+....+.     ++.+++..+..++.. .
T Consensus         3 ~~~~l~~l~~~~~Wg~~~~~~----k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~~-----~~~~~~~~~~~g~~~~~   70 (299)
T PRK11453          3 RKDGVLALLVVVVWGLNFVVI----KVGLH--NMP-PLMLAGLRFMLVAFPAIFFVAR-----PKVPLNLLLGYGLTISF   70 (299)
T ss_pred             HHHHHHHHHHHHHHhhhHHHH----HHHHh--cCC-HHHHHHHHHHHHHHHHHHHhcC-----CCCchHHHHHHHHHHHH
Confidence            344555555666665554433    77775  466 9999999999876654443211     223445555555543 2


Q ss_pred             HHhhhccccccc-chhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecC---ccchHHHHHHHHH
Q 042552           84 ISIGLLNLSLGF-NSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTD---LQLNMVGTILSLL  159 (179)
Q Consensus        84 ~~~~~~n~sl~~-~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d---~~~~~~G~~~~l~  159 (179)
                      ....+...+++| .|.+...++-.+.|+++.+++++++|||++.+++.++++..+|+.+...++   .+.+..|..+++.
T Consensus        71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~  150 (299)
T PRK11453         71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLA  150 (299)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHH
Confidence            333455667777 688888988888888999999999999999999999999999988765432   2346689999999


Q ss_pred             HHHHHHHHHHHHcc
Q 042552          160 AIVTTCVGQIVSFF  173 (179)
Q Consensus       160 s~~~~a~~~i~~~~  173 (179)
                      +.++.|.|.++.|+
T Consensus       151 aal~~a~~~v~~~~  164 (299)
T PRK11453        151 AAFSWACGNIFNKK  164 (299)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998865

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.15  E-value=4.4e-09  Score=86.20  Aligned_cols=154  Identities=17%  Similarity=0.041  Sum_probs=111.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHHHHHHHhhhcc
Q 042552           11 VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLN   90 (179)
Q Consensus        11 ~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~n   90 (179)
                      .+..+..|-..    ....|...+  ++| |..+.+.++..+.+......+.+  +.++.+++..+..++.+.....+.+
T Consensus         9 ~l~a~~~Wg~~----~~~~k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~   79 (295)
T PRK11689          9 GLIAILLWSTM----VGLIRGVSE--SLG-PVGGAAMIYSVSGLLLLLTVGFP--RLRQFPKRYLLAGGLLFVSYEICLA   79 (295)
T ss_pred             HHHHHHHHHHH----HHHHHHHHc--cCC-hHHHHHHHHHHHHHHHHHHcccc--ccccccHHHHHHHhHHHHHHHHHHH
Confidence            34445555433    456788886  467 99999999999988776553211  1223334444444555556666666


Q ss_pred             ccccc----chhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCcc-----------chHHHHH
Q 042552           91 LSLGF----NSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQ-----------LNMVGTI  155 (179)
Q Consensus        91 ~sl~~----~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~-----------~~~~G~~  155 (179)
                      .+++|    .+.....++-.+.|+++.+++.+++|||++++++.++++...|+.+...+|.+           .+..|..
T Consensus        80 ~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~  159 (295)
T PRK11689         80 LSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYG  159 (295)
T ss_pred             HHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHH
Confidence            66654    45555677888889999999999999999999999999999999876554321           2356999


Q ss_pred             HHHHHHHHHHHHHHHHcc
Q 042552          156 LSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       156 ~~l~s~~~~a~~~i~~~~  173 (179)
                      +++.+.++.|.|.++.|+
T Consensus       160 ~~l~aa~~~A~~~v~~k~  177 (295)
T PRK11689        160 LAFIGAFIWAAYCNVTRK  177 (295)
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999999976

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.13  E-value=5.2e-09  Score=85.60  Aligned_cols=143  Identities=15%  Similarity=0.147  Sum_probs=109.9

Q ss_pred             HHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH-HHcCCCccCccchhHHHHHHHHH-HHHhhhccccc-ccchhhHHHH
Q 042552           27 ICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA-QRLNFFESKAVDVKTVMLFGILN-GISIGLLNLSL-GFNSVGFYQM  103 (179)
Q Consensus        27 ~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~-~~~~~~~~~~~~~~~~lp~~l~~-~~~~~~~n~sl-~~~sv~~~~i  103 (179)
                      ..-|...+  +.+ |..+++.|+.++.+.+.+. +..+...+++.++++....+.+. .....+-+.+. ++.|.+...+
T Consensus        25 ~~~K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~  101 (292)
T PRK11272         25 LVIRIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAV  101 (292)
T ss_pred             HHHHHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence            55687776  456 9999999999998876554 33222122333455666666653 45556667777 8999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeec-CccchHHHHHHHHHHHHHHHHHHHHHcc
Q 042552          104 TKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVT-DLQLNMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       104 ~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~-d~~~~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                      +-.+.|.++.+++.+ +|||++++++.++++..+|+.+...+ +.+.+..|..+++++.++.|.+.++.|+
T Consensus       102 l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~  171 (292)
T PRK11272        102 VVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSR  171 (292)
T ss_pred             HHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999988875 69999999999999999998776533 3456678999999999999999998865

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.11  E-value=3.9e-09  Score=86.58  Aligned_cols=159  Identities=14%  Similarity=0.085  Sum_probs=110.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH-HHcCCCcc---CccchhHH---HHHH
Q 042552            7 FQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA-QRLNFFES---KAVDVKTV---MLFG   79 (179)
Q Consensus         7 ~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~-~~~~~~~~---~~~~~~~~---lp~~   79 (179)
                      +....+.........+..-.+. |.+ .  +.| |..+.+.|+.++.+.+... ...+..+.   +..++++.   ..-+
T Consensus         6 ~~~g~~~~l~a~~~wg~~~~~~-k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (296)
T PRK15430          6 TRQGVLLALAAYFIWGIAPAYF-KLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSA   80 (296)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHH-HHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHH
Confidence            3333444444444444444444 875 3  466 9999999999988654432 21111111   11123332   2233


Q ss_pred             HHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHHH
Q 042552           80 ILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLL  159 (179)
Q Consensus        80 l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l~  159 (179)
                      +....+..+.+.++++.|++...++..+.|+++++++++++|||++++++.++.+...|+.+....+.+.+    .+.+.
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~  156 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALG  156 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHH
Confidence            55667888999999999999999999999999999999999999999999999999999987543222222    45777


Q ss_pred             HHHHHHHHHHHHccc
Q 042552          160 AIVTTCVGQIVSFFK  174 (179)
Q Consensus       160 s~~~~a~~~i~~~~k  174 (179)
                      +.++.|+|.++.|+.
T Consensus       157 aa~~~a~~~i~~r~~  171 (296)
T PRK15430        157 LAFSFAFYGLVRKKI  171 (296)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            889999999887664

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.06  E-value=7.5e-09  Score=87.24  Aligned_cols=167  Identities=14%  Similarity=0.140  Sum_probs=122.9

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH-H-HcCCCccCccchhH---HHHHH
Q 042552            5 SSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA-Q-RLNFFESKAVDVKT---VMLFG   79 (179)
Q Consensus         5 ~~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~-~-~~~~~~~~~~~~~~---~lp~~   79 (179)
                      |+...+...+...==++..++..+-|..++ .|.+ |..+.++|+.++.+.+... . +.+..++++.++++   ....+
T Consensus         8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g   85 (358)
T PLN00411          8 WRREAVFLTAMLATETSVVGISTLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLG   85 (358)
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence            444455555555555677888889999996 5777 8889999999998776543 2 21212223334444   44455


Q ss_pred             HHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHH------hccccChhhhhHHhHhhhhheeeee-cCc-----
Q 042552           80 ILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLF------LKKQFSQKIKFSLFLLLVGVGIASV-TDL-----  147 (179)
Q Consensus        80 l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~------~~~~~s~~~~~sl~li~~Gv~~~~~-~d~-----  147 (179)
                      ++......+.+.+++|.|.+...++-+++|.++++++.++      +|||.+++++.++++...|+.+... ++.     
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            5443344578999999999999999999999999999988      6999999999999999999876432 111     


Q ss_pred             ------------------cch-HHHHHHHHHHHHHHHHHHHHHcc
Q 042552          148 ------------------QLN-MVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       148 ------------------~~~-~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                                        +-+ ..|..+++.+.++.|+|.+..++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~  210 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAH  210 (358)
T ss_pred             cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                              112 45999999999999999887754

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.97  E-value=4.2e-08  Score=80.32  Aligned_cols=141  Identities=15%  Similarity=0.054  Sum_probs=102.4

Q ss_pred             HHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHHHHHHHhhhcccccccchhhHHHH
Q 042552           24 SIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQM  103 (179)
Q Consensus        24 ~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i  103 (179)
                      +.....|++++  .+| |..+.+.|++++.+.+.+..+.+..+.++.+++..+..+++......+...+++|.|.+...+
T Consensus        26 ~~~~~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~  102 (293)
T PRK10532         26 SGASLAKSLFP--LVG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA  102 (293)
T ss_pred             hhHHHHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence            33447899997  366 899999999999887766532222223344566677778777777788889999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee---cCccchHHHHHHHHHHHHHHHHHHHHHcc
Q 042552          104 TKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV---TDLQLNMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       104 ~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~---~d~~~~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                      +..+.|.++.+++    +|+++...  .+.+...|+.+...   ++.+.+..|..+++.+.++.|.|.+..|+
T Consensus       103 l~~t~Pi~~~ll~----~~~~~~~~--~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~  169 (293)
T PRK10532        103 LEFTGPLAVALFS----SRRPVDFV--WVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQR  169 (293)
T ss_pred             HHHHHHHHHHHHh----cCChHHHH--HHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence            9987777776655    35555444  34556778766432   12345678999999999999999998865

>TIGR00688 rarD rarD protein

Probab=98.96  E-value=3.7e-08  Score=78.91  Aligned_cols=139  Identities=18%  Similarity=0.172  Sum_probs=101.7

Q ss_pred             HHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH-HHcCCC-----ccCccchh----HHHHHHHHHHHHhhhcccccccc
Q 042552           27 ICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA-QRLNFF-----ESKAVDVK----TVMLFGILNGISIGLLNLSLGFN   96 (179)
Q Consensus        27 ~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~-~~~~~~-----~~~~~~~~----~~lp~~l~~~~~~~~~n~sl~~~   96 (179)
                      ..-|++ .  +.+ |..+.+.|++++.+.+.+. ...+..     +.++.+.+    .....+++...+..+-..++++.
T Consensus        19 ~~~k~~-~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~   94 (256)
T TIGR00688        19 YYSKLL-K--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNG   94 (256)
T ss_pred             HHHHHh-c--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            345763 3  366 9999999999988765442 111111     00111111    23445666777888999999999


Q ss_pred             hhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHHHHHHHHHHHHHHHcc
Q 042552           97 SVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus        97 sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                      |++..+++-.++|.++++++.+++|||+++++++++++..+|+++...++.+.+    .+++.+.++.|.|.+..|+
T Consensus        95 ~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~  167 (256)
T TIGR00688        95 SSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKA  167 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999876543322222    3567889999999988755

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.96  E-value=4.8e-09  Score=84.03  Aligned_cols=100  Identities=23%  Similarity=0.320  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCcc-----
Q 042552           74 TVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQ-----  148 (179)
Q Consensus        74 ~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~-----  148 (179)
                      +...-++++..+-.+...++++.+.+.||+++.+.+++++++.++++|||.+.++|.++.+++.|+++...++..     
T Consensus        19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~   98 (244)
T PF04142_consen   19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNS   98 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccc
Confidence            444456678888889999999999999999999999999999999999999999999999999999987553321     


Q ss_pred             ------------chHHHHHHHHHHHHHHHHHHHHHcc
Q 042552          149 ------------LNMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       149 ------------~~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                                  -...|+...+.+.++.++..+|.|+
T Consensus        99 ~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~  135 (244)
T PF04142_consen   99 SSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEK  135 (244)
T ss_pred             cccccccccccchhHhHHHHHHHHHHHHHHHHHHHHH
Confidence                        1368999999999999999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.89  E-value=1.3e-08  Score=71.86  Aligned_cols=114  Identities=17%  Similarity=0.257  Sum_probs=90.2

Q ss_pred             HHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH---HHcCC-CccCccchhHHHHHHHH-HHHHhhhcccccccchhh
Q 042552           25 IVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA---QRLNF-FESKAVDVKTVMLFGIL-NGISIGLLNLSLGFNSVG   99 (179)
Q Consensus        25 ~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~---~~~~~-~~~~~~~~~~~lp~~l~-~~~~~~~~n~sl~~~sv~   99 (179)
                      ....+|...++  +| |...++.|+..+.+ ..+.   ...+. .+.++.++......+++ ......+.+.++++.+.+
T Consensus         6 ~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~   81 (126)
T PF00892_consen    6 YSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS   81 (126)
T ss_pred             HHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence            45778888874  66 89999999999986 3332   22221 22333344556666665 578889999999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheee
Q 042552          100 FYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIA  142 (179)
Q Consensus       100 ~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~  142 (179)
                      ..++.....|+++.+++++++||+++.+++.++++++.|+.+.
T Consensus        82 ~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   82 IVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998654

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.87  E-value=4.4e-07  Score=72.71  Aligned_cols=133  Identities=17%  Similarity=0.119  Sum_probs=101.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcCC--CccCccchh-HHHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHH
Q 042552           41 ATTLTSWHLMVTFCTLHAAQRLNF--FESKAVDVK-TVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLET  117 (179)
Q Consensus        41 p~~lt~~q~~~~~~~~~i~~~~~~--~~~~~~~~~-~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~  117 (179)
                      +......+.....+........+.  ..+.+.+++ ..+..++.......+.+.++++.+.+..+.+.++.|.++.+++.
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~  115 (292)
T COG0697          36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV  115 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence            455556688877776443333222  112222223 34444556777888889999999999999999999999999996


Q ss_pred             -HHhccccChhhhhHHhHhhhhheeeeecCccc---hHHHHHHHHHHHHHHHHHHHHHcc
Q 042552          118 -LFLKKQFSQKIKFSLFLLLVGVGIASVTDLQL---NMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       118 -~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~---~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                       +++|||++++++.++.....|+.+...++...   +..|..+++.+.++.|++.+..++
T Consensus       116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~  175 (292)
T COG0697         116 LLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKR  175 (292)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             67799999999999999999999988766644   368999999999999999988853

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.73  E-value=6.1e-07  Score=72.96  Aligned_cols=99  Identities=13%  Similarity=0.096  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecC-ccchHHH
Q 042552           75 VMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTD-LQLNMVG  153 (179)
Q Consensus        75 ~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d-~~~~~~G  153 (179)
                      .+..++.......+.+.++++.|.+..+.+....|+++.+++.+++|||++.+++.++.+...|+.+...+| .+.+..|
T Consensus        66 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g  145 (281)
T TIGR03340        66 LAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKA  145 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhH
Confidence            333444566778888999999999999999999999999999999999999999999999999987754433 3356678


Q ss_pred             HHHHHHHHHHHHHHHHHHcc
Q 042552          154 TILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       154 ~~~~l~s~~~~a~~~i~~~~  173 (179)
                      ..+++.+.++.+.|.+..|+
T Consensus       146 ~~~~l~aal~~a~~~i~~k~  165 (281)
T TIGR03340       146 YAWALAAALGTAIYSLSDKA  165 (281)
T ss_pred             HHHHHHHHHHHHHhhhhccc
Confidence            88999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=98.69  E-value=9.6e-08  Score=79.57  Aligned_cols=102  Identities=21%  Similarity=0.249  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHH----HhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCc--
Q 042552           74 TVMLFGILNGI----SIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDL--  147 (179)
Q Consensus        74 ~~lp~~l~~~~----~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~--  147 (179)
                      +....++.||.    .-.+.|.||+|.+++..+++-+++-.++..++.++.+||+|+.+.+++.+-+.|+++.+.+|.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            56666665543    456889999999999999999999999999999999999999999999999999999999854  


Q ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHHcccc
Q 042552          148 ------QLNMVGTILSLLAIVTTCVGQIVSFFKW  175 (179)
Q Consensus       148 ------~~~~~G~~~~l~s~~~~a~~~i~~~~k~  175 (179)
                            +-+..|-++++++.+.+|.|.++.|+|.
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~  270 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKI  270 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence                  2348999999999999999999998874

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.48  E-value=7e-07  Score=63.09  Aligned_cols=77  Identities=25%  Similarity=0.333  Sum_probs=65.3

Q ss_pred             chhHHHHHHHHHH-HHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCcc
Q 042552           71 DVKTVMLFGILNG-ISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQ  148 (179)
Q Consensus        71 ~~~~~lp~~l~~~-~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~  148 (179)
                      ++...+..++... .+..+...|+++.| +....+.++.|+++++++.+++|||++++++.++.++.+|+++...+|.+
T Consensus        33 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   33 PWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            3444555566554 77889999999999 68889999999999999999999999999999999999999998777654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.47  E-value=2.1e-06  Score=69.41  Aligned_cols=156  Identities=19%  Similarity=0.238  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHHhhc-----cCCCchHHHHHHHHHHHHHHHHHH---HHHc----CCCc-------cCccchh--HHHHH
Q 042552           20 ASSVSIVICNKALMS-----NLGFPFATTLTSWHLMVTFCTLHA---AQRL----NFFE-------SKAVDVK--TVMLF   78 (179)
Q Consensus        20 ~~S~~~~~~NK~ll~-----~~~f~~p~~lt~~q~~~~~~~~~i---~~~~----~~~~-------~~~~~~~--~~lp~   78 (179)
                      ++...=++.-||.-+     ..+|..|..-+..-|+--...+.+   .|+.    |...       .++-|.+  -.+|-
T Consensus        13 vsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~P   92 (372)
T KOG3912|consen   13 VSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPP   92 (372)
T ss_pred             hhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecCh
Confidence            334444567788765     356878887776655543222222   2221    1111       1111333  45777


Q ss_pred             HHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCc----------c
Q 042552           79 GILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDL----------Q  148 (179)
Q Consensus        79 ~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~----------~  148 (179)
                      +++=.....+.+.+|.+.+-+-+||+|-...+++.+++..+++++.+.++|+++..+..|+++....|.          +
T Consensus        93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s  172 (372)
T KOG3912|consen   93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYS  172 (372)
T ss_pred             HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccc
Confidence            888888888999999999999999999999999999999999999999999999999999988776653          2


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHccccc
Q 042552          149 LNMVGTILSLLAIVTTCVGQIVSFFKWL  176 (179)
Q Consensus       149 ~~~~G~~~~l~s~~~~a~~~i~~~~k~~  176 (179)
                      --..|-.+.+.+.+.-|. |...|+|.+
T Consensus       173 ~iitGdllIiiaqiivai-Q~v~Eek~l  199 (372)
T KOG3912|consen  173 SIITGDLLIIIAQIIVAI-QMVCEEKQL  199 (372)
T ss_pred             cchhhhHHHHHHHHHHHH-HHHHHHhhh
Confidence            236799999999999999 455566654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.37  E-value=2.3e-05  Score=62.43  Aligned_cols=125  Identities=18%  Similarity=0.128  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHc-CC-CccCccchhHHHHHHHH-HHHHhhhcc
Q 042552           14 ALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRL-NF-FESKAVDVKTVMLFGIL-NGISIGLLN   90 (179)
Q Consensus        14 ~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~-~~-~~~~~~~~~~~lp~~l~-~~~~~~~~n   90 (179)
                      ..+.-..+=......+|...++++-+ +......++.++.+.+...... +. .+.++.++...+-.+++ ......+.+
T Consensus       132 ~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (260)
T TIGR00950       132 LGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFLWN  210 (260)
T ss_pred             HHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            33333344444456678877654422 4566667888887776654322 21 11111122234445554 456777889


Q ss_pred             cccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhh
Q 042552           91 LSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGV  139 (179)
Q Consensus        91 ~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv  139 (179)
                      .++++.+.+.........|++.++++++++||+++..++.+..++..|+
T Consensus       211 ~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       211 KGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999999999999986

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.28  E-value=4.5e-05  Score=62.56  Aligned_cols=103  Identities=17%  Similarity=0.135  Sum_probs=79.2

Q ss_pred             chhHHHHHHHH----HHHHhhhcccccccchhhHHHHHhH-HHHHHHHHHHHHHhccccChhh----hhHHhHhhhhhee
Q 042552           71 DVKTVMLFGIL----NGISIGLLNLSLGFNSVGFYQMTKL-AIIPFTVLLETLFLKKQFSQKI----KFSLFLLLVGVGI  141 (179)
Q Consensus        71 ~~~~~lp~~l~----~~~~~~~~n~sl~~~sv~~~~i~k~-~~~~~~~~~~~~~~~~~~s~~~----~~sl~li~~Gv~~  141 (179)
                      +.++.++.++.    .+..-.+...|.++..++....+-. ..+.+..+.+.+++||+.++++    ..++++++.|+++
T Consensus        54 ~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l  133 (290)
T TIGR00776        54 WALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYL  133 (290)
T ss_pred             cccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHhe
Confidence            33555555554    5555577778889999998877776 3344556778999999999999    9999999999998


Q ss_pred             eeecCcc-------ch-HHHHHHHHHHHHHHHHHHHHHcc
Q 042552          142 ASVTDLQ-------LN-MVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       142 ~~~~d~~-------~~-~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                      .+..+.+       .+ ..|+.+++++.+++++|.+..|+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~  173 (290)
T TIGR00776       134 TSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKA  173 (290)
T ss_pred             EEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            7653321       33 78999999999999999888753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.07  E-value=0.00029  Score=58.72  Aligned_cols=161  Identities=16%  Similarity=0.135  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCch-HHHHHHHHHHHHHHHHHH--HHHcCC--Ccc-Cc------cchhHH---HH
Q 042552           13 GALFLSVASSVSIVICNKALMSNLGFPF-ATTLTSWHLMVTFCTLHA--AQRLNF--FES-KA------VDVKTV---ML   77 (179)
Q Consensus        13 ~~~~~~~~~S~~~~~~NK~ll~~~~f~~-p~~lt~~q~~~~~~~~~i--~~~~~~--~~~-~~------~~~~~~---lp   77 (179)
                      .....--+-+.++.+.-|+--.+++.+| |.+..++-=....+++..  .+..++  -+. +.      ..+++.   ..
T Consensus        18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v   97 (345)
T KOG2234|consen   18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV   97 (345)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence            3344445556666666676666554443 555544433333322222  121111  010 00      112233   33


Q ss_pred             HHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecC-----------
Q 042552           78 FGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTD-----------  146 (179)
Q Consensus        78 ~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d-----------  146 (179)
                      -++.++.+--+...++.+.+.++||+.-...+..++++..++++||.++++|.++++...|+.+.-.++           
T Consensus        98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~  177 (345)
T KOG2234|consen   98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESS  177 (345)
T ss_pred             HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCc
Confidence            344555544577788999999999999999999999999999999999999999999999998865211           


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHcc
Q 042552          147 LQLNMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       147 ~~~~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                      .+-++.|....+.+++..++-++|.||
T Consensus       178 ~~n~~~G~~avl~~c~~SgfAgvYfEk  204 (345)
T KOG2234|consen  178 AQNPFLGLVAVLVACFLSGFAGVYFEK  204 (345)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            124578999999999999999998854

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.98  E-value=0.00013  Score=51.60  Aligned_cols=73  Identities=16%  Similarity=0.155  Sum_probs=61.4

Q ss_pred             cchhHHHHHHH---HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheee
Q 042552           70 VDVKTVMLFGI---LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIA  142 (179)
Q Consensus        70 ~~~~~~lp~~l---~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~  142 (179)
                      .+++...+.++   ++..+..+-..+++..|++....+-+..+..+.+.+++++|||+|.++++++.+++.|+++.
T Consensus        32 ~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         32 RRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            33444444443   46678889999999999999999999899999999999999999999999999999998764

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.78  E-value=0.00047  Score=49.69  Aligned_cols=123  Identities=19%  Similarity=0.177  Sum_probs=86.7

Q ss_pred             HHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH-HHcCCCc-cCccchh---HHHHHHHHHHHHhhhccccc
Q 042552           19 VASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA-QRLNFFE-SKAVDVK---TVMLFGILNGISIGLLNLSL   93 (179)
Q Consensus        19 ~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~-~~~~~~~-~~~~~~~---~~lp~~l~~~~~~~~~n~sl   93 (179)
                      ..+.....++-|.-++  +.+ |.+=|..+..+....+... -..|..+ +...+.|   -+..-++....+-.+-..++
T Consensus        12 A~fa~L~~iF~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~AL   88 (140)
T COG2510          12 ALFAGLTPIFAKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRAL   88 (140)
T ss_pred             HHHHHHHHHHHHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHH
Confidence            3334445678888887  444 8888888888777666543 2233332 2223333   34444566777777777888


Q ss_pred             ccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           94 GFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        94 ~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      +--..|-..=+-..+|.++++++..++|||+|.+++.++.++++|+.+.+.
T Consensus        89 k~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          89 KKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             hcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            877766655555578899999999999999999999999999999987653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.76  E-value=0.0012  Score=48.33  Aligned_cols=123  Identities=18%  Similarity=0.095  Sum_probs=83.5

Q ss_pred             HHHHHHHHHHHHhhcc-----CCCchHHHHHHHHHHHHHHHHHHHH-HcCCCc-------cCc-------cchhHHHHHH
Q 042552           20 ASSVSIVICNKALMSN-----LGFPFATTLTSWHLMVTFCTLHAAQ-RLNFFE-------SKA-------VDVKTVMLFG   79 (179)
Q Consensus        20 ~~S~~~~~~NK~ll~~-----~~f~~p~~lt~~q~~~~~~~~~i~~-~~~~~~-------~~~-------~~~~~~lp~~   79 (179)
                      .++..-..+.|..+++     .+.+ |..+....-..+.+.+.+.. ..+..+       .++       ..+..++..+
T Consensus        10 ~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (153)
T PF03151_consen   10 LFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSG   88 (153)
T ss_pred             HHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHH
Confidence            3334444555666665     4665 66666666666665554431 111111       111       1112334444


Q ss_pred             HHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeee
Q 042552           80 ILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIAS  143 (179)
Q Consensus        80 l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~  143 (179)
                      +.....-..+...+++.|.-.++++.....+++.+++.++++|+++..++.++.+.+.|+.+.+
T Consensus        89 ~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   89 LLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            5555556788889999999999999999999999999999999999999999999999997764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.67  E-value=0.001  Score=54.32  Aligned_cols=106  Identities=11%  Similarity=-0.023  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-cCCCc---cCccchhHHHHHHHH-HHHHhhhcccccccchhhHHHHHhHHHHHHHHHH
Q 042552           41 ATTLTSWHLMVTFCTLHAAQR-LNFFE---SKAVDVKTVMLFGIL-NGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLL  115 (179)
Q Consensus        41 p~~lt~~q~~~~~~~~~i~~~-~~~~~---~~~~~~~~~lp~~l~-~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~  115 (179)
                      +...+..|+.++...+.+... .+...   ++...+..++-.++. ......+-+.++++.+.+...+.....|++.+++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~  256 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL  256 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence            556778898888776655432 22111   111123344445553 4456778899999999999999999999999999


Q ss_pred             HHHHhccccChhhhhHHhHhhhhheeeeecC
Q 042552          116 ETLFLKKQFSQKIKFSLFLLLVGVGIASVTD  146 (179)
Q Consensus       116 ~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d  146 (179)
                      +++++||+++..++.+..++..|+.+....+
T Consensus       257 ~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        257 GTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999997765443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.64  E-value=1.9e-05  Score=63.56  Aligned_cols=156  Identities=17%  Similarity=0.219  Sum_probs=106.7

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH---HHcCCCccCccchhHHHHHHH
Q 042552            4 MSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA---QRLNFFESKAVDVKTVMLFGI   80 (179)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~---~~~~~~~~~~~~~~~~lp~~l   80 (179)
                      +|+...+.....+. +..+.+++...|-+..    + |.-+.-.+++.-.+..+.+   ++.+.+ .|+-.++.++.=++
T Consensus        33 ~d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~----~-p~e~a~~r~l~~mlit~pcliy~~~~v~-gp~g~R~~LiLRg~  105 (346)
T KOG4510|consen   33 KDKPNLGLLLLTVS-YFFNSCMVVSTKVLEN----D-PMELASFRLLVRMLITYPCLIYYMQPVI-GPEGKRKWLILRGF  105 (346)
T ss_pred             cCCCccCceehhhH-HHHhhHHHhhhhhhcc----C-hhHhhhhhhhhehhhhheEEEEEeeeee-cCCCcEEEEEeehh
Confidence            45666665555555 6667777777777654    2 5566655555555554443   222221 11112222333355


Q ss_pred             HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee-----cCc--------
Q 042552           81 LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV-----TDL--------  147 (179)
Q Consensus        81 ~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~-----~d~--------  147 (179)
                      .....+....+|++|.|++=..++--++|.++.++++.++||++|+-..+.......||++..-     ||.        
T Consensus       106 mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~  185 (346)
T KOG4510|consen  106 MGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQ  185 (346)
T ss_pred             hhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccc
Confidence            5566677889999999999999999899999999999999999999999999999999988632     332        


Q ss_pred             -cchHHHHHHHHHHHHHHHH
Q 042552          148 -QLNMVGTILSLLAIVTTCV  166 (179)
Q Consensus       148 -~~~~~G~~~~l~s~~~~a~  166 (179)
                       +.+..|-..++.+.+..|-
T Consensus       186 ~~~~~~gt~aai~s~lf~as  205 (346)
T KOG4510|consen  186 VEYDIPGTVAAISSVLFGAS  205 (346)
T ss_pred             ccccCCchHHHHHhHhhhhh
Confidence             2456787777777777664

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.52  E-value=0.0026  Score=53.84  Aligned_cols=116  Identities=14%  Similarity=0.132  Sum_probs=80.5

Q ss_pred             HHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHH-H-cCC-Ccc--Cccchh--HHHHHHHHHHHHhhhcccccccchhh
Q 042552           27 ICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ-R-LNF-FES--KAVDVK--TVMLFGILNGISIGLLNLSLGFNSVG   99 (179)
Q Consensus        27 ~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~-~-~~~-~~~--~~~~~~--~~lp~~l~~~~~~~~~n~sl~~~sv~   99 (179)
                      ...|....  ++|.+...+++|+.+..+...+.. . .+. .+.  .+.+..  .++-.++...+...+.|.++++.+.+
T Consensus       206 il~~~~~~--~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~  283 (358)
T PLN00411        206 ILQAHIMS--EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPL  283 (358)
T ss_pred             HHHHHHHH--HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCch
Confidence            45565555  345456778888887766554321 1 111 110  011111  12223344444566789999999999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552          100 FYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus       100 ~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      ...+.-...|++.++++++++||+++..++++.++++.|+.+...
T Consensus       284 ~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        284 YLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999988654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.50  E-value=8.2e-05  Score=57.60  Aligned_cols=101  Identities=14%  Similarity=0.072  Sum_probs=89.7

Q ss_pred             hhHHHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCc--cc
Q 042552           72 VKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDL--QL  149 (179)
Q Consensus        72 ~~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~--~~  149 (179)
                      .++..|.+++..+.-+.--.+++..|.+-.+-+-++--.++.++++..+|+|+.--++++.++.+.|+.+.++.|.  .-
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            3467888888888777888899999999888888888899999999999999999999999999999999887665  46


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHc
Q 042552          150 NMVGTILSLLAIVTTCVGQIVSF  172 (179)
Q Consensus       150 ~~~G~~~~l~s~~~~a~~~i~~~  172 (179)
                      ++.|+.+++.|....|+|.+.-|
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK  155 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFK  155 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999998873

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=97.43  E-value=9.3e-05  Score=59.33  Aligned_cols=137  Identities=15%  Similarity=0.162  Sum_probs=94.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHH---HHHcCCCccCccchhHHHHHHHH
Q 042552            5 SSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHA---AQRLNFFESKAVDVKTVMLFGIL   81 (179)
Q Consensus         5 ~~~~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i---~~~~~~~~~~~~~~~~~lp~~l~   81 (179)
                      +|+-+...+.-=.=-+++.+..+.|.++-+. +.+-|.+=++.....-+++--.   .|+ +.+   +..|++.+.+++.
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~---~~~~~hYilla~~   87 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR-KYI---KAKWRHYILLAFV   87 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh-HHH---HHHHHHhhheeEE
Confidence            4444443333333345666777788888764 4667877776665443333221   122 211   2345666666655


Q ss_pred             HHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecC
Q 042552           82 NGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTD  146 (179)
Q Consensus        82 ~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d  146 (179)
                      -.-.-.+--.++||.|..-.+.+-+-..|.++++++++++.|+.+.++.+++..+.|+.+....|
T Consensus        88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sD  152 (336)
T KOG2766|consen   88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSD  152 (336)
T ss_pred             eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEee
Confidence            44444455689999999999999999999999999999999999999999999999998876655

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.38  E-value=0.0015  Score=53.54  Aligned_cols=120  Identities=16%  Similarity=0.088  Sum_probs=77.9

Q ss_pred             HHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHH-cCCCccCc---------cchhHHHHHH----H-HHHHHhhh
Q 042552           24 SIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQR-LNFFESKA---------VDVKTVMLFG----I-LNGISIGL   88 (179)
Q Consensus        24 ~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~-~~~~~~~~---------~~~~~~lp~~----l-~~~~~~~~   88 (179)
                      .-....|...++.+.+ |..++..|+..+.+.+.+... .+..+...         ..........    . .+.....+
T Consensus       159 ~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (302)
T TIGR00817       159 SRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV  237 (302)
T ss_pred             HHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHH
Confidence            3445666666644454 788999999888876655422 12111000         0111112111    1 11111135


Q ss_pred             cccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           89 LNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        89 ~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      .+.++++.|...+.+.-...|++.++++++++||+++..++++..++..|+.+...
T Consensus       238 ~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       238 AFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            55789999999999998777777778899999999999999999999999977543

specificities overlap.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.32  E-value=0.0083  Score=49.04  Aligned_cols=69  Identities=10%  Similarity=0.077  Sum_probs=59.9

Q ss_pred             HHHHHH-HHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           76 MLFGIL-NGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        76 lp~~l~-~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      +-++++ ..+...+.|.++++.+.+...+.-...|++..+++++++||+++..++++..+++.|++..+.
T Consensus       212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            445554 455677889999999999999999999999999999999999999999999999999877643

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.30  E-value=0.0062  Score=49.84  Aligned_cols=69  Identities=12%  Similarity=0.134  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           76 MLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        76 lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      +-.++.......+-|.++++.+.+...+.-...|++.++++++++||+++..++.+.+++..|+.+...
T Consensus       219 ~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        219 LLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            334444555677889999999999999999999999999999999999999999999999999876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.25  E-value=0.0015  Score=53.01  Aligned_cols=62  Identities=16%  Similarity=0.251  Sum_probs=55.0

Q ss_pred             HHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhhee
Q 042552           80 ILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGI  141 (179)
Q Consensus        80 l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~  141 (179)
                      +.......+.+.++++.+.+........+|++..+++++++||+++..++.+..++..|+.+
T Consensus       219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            44555677888999999999988899889999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.18  E-value=0.0026  Score=45.59  Aligned_cols=73  Identities=16%  Similarity=0.170  Sum_probs=60.7

Q ss_pred             hHHHHHHHHHHHHhhhcccccccchhhHHHHH-hHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeec
Q 042552           73 KTVMLFGILNGISIGLLNLSLGFNSVGFYQMT-KLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVT  145 (179)
Q Consensus        73 ~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~-k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~  145 (179)
                      .+.....+++..+..+-..+++++|++...-. .......+.+++.+++||+.|..+++++.++++|++.....
T Consensus        31 ~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         31 GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            34455666788899999999999999986655 45677888889999999999999999999999999775443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.07  E-value=0.021  Score=46.74  Aligned_cols=72  Identities=14%  Similarity=0.146  Sum_probs=58.1

Q ss_pred             HHHHHHH-HHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecC
Q 042552           75 VMLFGIL-NGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTD  146 (179)
Q Consensus        75 ~lp~~l~-~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d  146 (179)
                      ++-++++ ..+...+-+.++++.+.+-..+.-...|++..+++++++||+++..++.+..+++.|+.+...+.
T Consensus       217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            3444433 44566778888888888888888888888889999999999999999999999999998765443

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.07  E-value=0.022  Score=47.90  Aligned_cols=125  Identities=12%  Similarity=0.023  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHhhccCC-----CchHHHHHHHHHHHHHHHHHHHHH-cCCC--c---------cCccchhHHHHHHH
Q 042552           18 SVASSVSIVICNKALMSNLG-----FPFATTLTSWHLMVTFCTLHAAQR-LNFF--E---------SKAVDVKTVMLFGI   80 (179)
Q Consensus        18 ~~~~S~~~~~~NK~ll~~~~-----f~~p~~lt~~q~~~~~~~~~i~~~-~~~~--~---------~~~~~~~~~lp~~l   80 (179)
                      -.++...-....|.++++++     .+ +..+...++.++.+.+..... .+..  .         .+.......+...+
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~  280 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIF  280 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHH
Confidence            34444455566677776542     33 454666667777765544321 1110  0         01111122222333


Q ss_pred             HHHHHhhhcc----cccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeee
Q 042552           81 LNGISIGLLN----LSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIAS  143 (179)
Q Consensus        81 ~~~~~~~~~n----~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~  143 (179)
                      ..+....+.|    .+++++|...+++.-...|+++++++++++||+++..++++..++++|+.+.+
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            3344444555    59999999999999999999999999999999999999999999999987643

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.97  E-value=0.03  Score=45.78  Aligned_cols=65  Identities=11%  Similarity=0.101  Sum_probs=56.9

Q ss_pred             HHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheee
Q 042552           78 FGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIA  142 (179)
Q Consensus        78 ~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~  142 (179)
                      .++.......+-+.++++.+.+.....-...|++..+.++++++|+++..++.+..++..|+.+.
T Consensus       219 ~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~  283 (296)
T PRK15430        219 AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF  283 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            34455567789999999999999999999999999999999999999999999999997776553

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.91  E-value=0.05  Score=43.81  Aligned_cols=136  Identities=18%  Similarity=0.082  Sum_probs=95.2

Q ss_pred             HHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHHHHHHHhhhcccccccchhhHHHHHhHH
Q 042552           28 CNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLA  107 (179)
Q Consensus        28 ~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~  107 (179)
                      +-|.++-  .+. |.-.+.++..++.+.+....|....+..+.+++.++..++....+-.+=..|++.+|.+....+...
T Consensus        30 ~Ak~LFP--~vG-~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~  106 (292)
T COG5006          30 FAKSLFP--LVG-AAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFT  106 (292)
T ss_pred             HHHHHcc--ccC-hhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence            5566664  333 7889999999988877665332223444556778888888877776677789999999999999977


Q ss_pred             HHHHHHHHHHHHhccccChhhhhHHhHhhhhheeee-ec--CccchHHHHHHHHHHHHHHHHHHHHHc
Q 042552          108 IIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIAS-VT--DLQLNMVGTILSLLAIVTTCVGQIVSF  172 (179)
Q Consensus       108 ~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~-~~--d~~~~~~G~~~~l~s~~~~a~~~i~~~  172 (179)
                      .|..+.++.    .||  .+....+.+.+.|..+-. .+  ..+.|..|..+++.+..+.+.|-+.-+
T Consensus       107 GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~  168 (292)
T COG5006         107 GPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQ  168 (292)
T ss_pred             cHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcc
Confidence            776655433    233  345555666666655432 22  246899999999999999999876653

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=96.77  E-value=0.021  Score=46.74  Aligned_cols=69  Identities=16%  Similarity=0.131  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHhhhcccccc-cchhhHHHHHhHHHHHHHHHHHHHHhccccChhhh----hHHhHhhhhheeee
Q 042552           75 VMLFGILNGISIGLLNLSLG-FNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIK----FSLFLLLVGVGIAS  143 (179)
Q Consensus        75 ~lp~~l~~~~~~~~~n~sl~-~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~----~sl~li~~Gv~~~~  143 (179)
                      .+..++.......+-..+++ +++.+...++-...|....+.+++++||+.+++++    ++.++++.|+.+..
T Consensus       214 ~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       214 NILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            34466666666666678888 99999988888887777777899999999999999    99999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.76  E-value=0.0063  Score=42.55  Aligned_cols=69  Identities=16%  Similarity=0.017  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHhhhcccccccchhhHHHHHh-HHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheee
Q 042552           74 TVMLFGILNGISIGLLNLSLGFNSVGFYQMTK-LAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIA  142 (179)
Q Consensus        74 ~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k-~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~  142 (179)
                      ..+...+++..+..+-..+++..|++..--.= ......+.+++++++||+.|+.+++++.+++.|++..
T Consensus        31 ~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         31 PSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            34445567888888999999999998755444 3567788889999999999999999999999998764

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.75  E-value=0.0058  Score=43.08  Aligned_cols=68  Identities=19%  Similarity=0.132  Sum_probs=56.7

Q ss_pred             HHHHHHHHHhhhcccccccchhhHHHHHhH-HHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           77 LFGILNGISIGLLNLSLGFNSVGFYQMTKL-AIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        77 p~~l~~~~~~~~~n~sl~~~sv~~~~i~k~-~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      ..-+++..+..+-..+++..|++...-.-+ .....+.+.+.+++||+.|+.++.++.+++.|++....
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            344567778888889999999998887765 36677788999999999999999999999999877543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.74  E-value=0.0057  Score=44.33  Aligned_cols=71  Identities=15%  Similarity=0.190  Sum_probs=57.5

Q ss_pred             HHHHH-HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHH--HhccccChhhhhHHhHhhhhheeeeecC
Q 042552           76 MLFGI-LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETL--FLKKQFSQKIKFSLFLLLVGVGIASVTD  146 (179)
Q Consensus        76 lp~~l-~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~--~~~~~~s~~~~~sl~li~~Gv~~~~~~d  146 (179)
                      +..++ ++..+..+-+.+++..|.+...-.-+..+..+.+.++.  ++||+.|..+++++.++++|+.+...++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            44454 57778899999999999999888887766666666663  7999999999999999999998865443

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.63  E-value=0.0067  Score=42.37  Aligned_cols=70  Identities=26%  Similarity=0.152  Sum_probs=57.1

Q ss_pred             hHHHHHHHHHHHHhhhcccccccchhhHHH-HHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheee
Q 042552           73 KTVMLFGILNGISIGLLNLSLGFNSVGFYQ-MTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIA  142 (179)
Q Consensus        73 ~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~-i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~  142 (179)
                      .+.+...+++..+..+-..++|++|++..- +--......+++.+++++||+.+..+++++.+++.|++.-
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            344555667888888999999999998754 4444567788889999999999999999999999998654

>TIGR00803 nst UDP-galactose transporter

Probab=96.61  E-value=0.0021  Score=50.32  Aligned_cols=78  Identities=23%  Similarity=0.100  Sum_probs=60.3

Q ss_pred             chhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCc---------------------------c
Q 042552           96 NSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDL---------------------------Q  148 (179)
Q Consensus        96 ~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~---------------------------~  148 (179)
                      +++|.+..+|+..+.++++.+...++||++..++++..+++.|+.....+|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5889999999999999999999999999999999999999999875433322                           1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHcc
Q 042552          149 LNMVGTILSLLAIVTTCVGQIVSFF  173 (179)
Q Consensus       149 ~~~~G~~~~l~s~~~~a~~~i~~~~  173 (179)
                      ..+.|....+.+..+.++-.++.|+
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~  106 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEK  106 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            2456777777777776665555543

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.60  E-value=0.096  Score=41.62  Aligned_cols=74  Identities=20%  Similarity=0.281  Sum_probs=60.0

Q ss_pred             chhHHHHHHHHHH-HHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           71 DVKTVMLFGILNG-ISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        71 ~~~~~lp~~l~~~-~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      ++......++... ....+-+.+++..+.+.........|+...+.++.+++|+++..++.+..+++.|+.+...
T Consensus       213 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~  287 (292)
T COG0697         213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASL  287 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence            3445556666544 4778888999999999999998777777777799999999999999999999999877544

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.58  E-value=0.011  Score=41.68  Aligned_cols=67  Identities=15%  Similarity=0.003  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHhhhcccccccchhhHHHHHh-HHHHHHHHHHHHHHhccccChhhhhHHhHhhhhhee
Q 042552           75 VMLFGILNGISIGLLNLSLGFNSVGFYQMTK-LAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGI  141 (179)
Q Consensus        75 ~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k-~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~  141 (179)
                      .....+.+..+..+-..++|+.|++..--.= ......+.+.+.+++||+.+..++.++.+++.|++.
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~  105 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM  105 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            3344556777888999999999998765444 346677888899999999999999999999999865

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.47  E-value=0.05  Score=44.70  Aligned_cols=133  Identities=14%  Similarity=0.094  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH-HH--cCCC-cc------CccchhHHHHHHH
Q 042552           11 VIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA-QR--LNFF-ES------KAVDVKTVMLFGI   80 (179)
Q Consensus        11 ~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~-~~--~~~~-~~------~~~~~~~~lp~~l   80 (179)
                      ....+..+..+.......+|.++++++-+ |.-+.+...+.+.+...+. ..  .+.. +.      .+.....++..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            45677888888888889999999988876 6666666555555554432 22  1111 10      0112344555556


Q ss_pred             HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           81 LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        81 ~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      +......+-+...+..+.-...+....--+++++++.++++++++...+.++.++..|..+...
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            5555555555555655555555555566788899999999999999999999999999876443

; GO: 0055085 transmembrane transport

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=96.28  E-value=0.086  Score=44.27  Aligned_cols=60  Identities=17%  Similarity=0.409  Sum_probs=48.8

Q ss_pred             hcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCc
Q 042552           88 LLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDL  147 (179)
Q Consensus        88 ~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~  147 (179)
                      +....+++.|..+..+.=.++.|..++++.+++|+++++.-+++.+++++|.++....+.
T Consensus       249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            335566666666666666678899999999999999999999999999999999877554

Some of the sequences in this family are annotated as putative membrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.07  E-value=0.035  Score=37.79  Aligned_cols=56  Identities=18%  Similarity=0.122  Sum_probs=33.3

Q ss_pred             HHHHHHhhhcccccccchhhHH-HHHhHHHHHHHHHHHHHHhccccChhhhhHHhHh
Q 042552           80 ILNGISIGLLNLSLGFNSVGFY-QMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLL  135 (179)
Q Consensus        80 l~~~~~~~~~n~sl~~~sv~~~-~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li  135 (179)
                      .++..+..+-..++++.|++.. -+........+.+.+.+++||+.|..++.++.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3678888899999999999876 4556677888899999999999999999988764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=95.98  E-value=0.057  Score=44.63  Aligned_cols=70  Identities=17%  Similarity=0.277  Sum_probs=61.2

Q ss_pred             HHHHHHH-HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeee
Q 042552           74 TVMLFGI-LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIAS  143 (179)
Q Consensus        74 ~~lp~~l-~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~  143 (179)
                      +.+..|+ .+..+-.++..|+.+.|.+..|-+-+...++.++++..++|||.+++.+.+..+++.|..+..
T Consensus        51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            4555565 466677889999999999999999999999999999999999999999999999999987643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.69  E-value=0.27  Score=40.31  Aligned_cols=150  Identities=20%  Similarity=0.193  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHH----HHcCCCccCccchhHHHHH---HHHH
Q 042552           10 GVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHAA----QRLNFFESKAVDVKTVMLF---GILN   82 (179)
Q Consensus        10 ~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~----~~~~~~~~~~~~~~~~lp~---~l~~   82 (179)
                      ..+.+++.|..-...= ++-|.+-   +.| +.-+...+.+.+..+..+.    |+.+....-..+.|+++-+   ++.-
T Consensus         8 Gil~~l~Ay~lwG~lp-~y~kll~---~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           8 GILLALLAYLLWGLLP-LYFKLLE---PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             hhHHHHHHHHHHHHHH-HHHHHHc---cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            4566666666666544 5667664   345 6667777777777665443    2222111101112222221   2222


Q ss_pred             HHHhhhcccccccc---hhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecCccchHHHHHHHHH
Q 042552           83 GISIGLLNLSLGFN---SVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTDLQLNMVGTILSLL  159 (179)
Q Consensus        83 ~~~~~~~n~sl~~~---sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d~~~~~~G~~~~l~  159 (179)
                      ..+-..=-++..+.   +.|+---+   -|.+.++++.+++|||.|+.++.++++..+||..-.....++++....++  
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~I---nPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la--  157 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFI---NPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA--  157 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHH---HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH--
Confidence            22222222232221   22222222   36677888999999999999999999999999887777777888765554  


Q ss_pred             HHHHHHHHHHHH
Q 042552          160 AIVTTCVGQIVS  171 (179)
Q Consensus       160 s~~~~a~~~i~~  171 (179)
                        +..++|....
T Consensus       158 --~sf~~Ygl~R  167 (293)
T COG2962         158 --LSFGLYGLLR  167 (293)
T ss_pred             --HHHHHHHHHH
Confidence              3455555443

>TIGR00803 nst UDP-galactose transporter

Probab=95.44  E-value=0.72  Score=35.92  Aligned_cols=132  Identities=9%  Similarity=-0.007  Sum_probs=82.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHH-HHH---HHcCCCccCc---cchhHHHHHHH
Q 042552            8 QLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTL-HAA---QRLNFFESKA---VDVKTVMLFGI   80 (179)
Q Consensus         8 ~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~-~i~---~~~~~~~~~~---~~~~~~lp~~l   80 (179)
                      ....+..++....++......+|+.+++++-  ....-..|+-.-.... ...   ...+..+...   ......+.+.+
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDT--MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGL  160 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCC--chHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHH
Confidence            3444555666666666777888888775422  1122222221111111 111   1111111111   01123344445


Q ss_pred             HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhhee
Q 042552           81 LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGI  141 (179)
Q Consensus        81 ~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~  141 (179)
                      ..+..-.+-+..++|.+.....+.-...+.++.+++.++++++++...+.+..++..|+.+
T Consensus       161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            5666667888999999888888888888999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.02  E-value=0.058  Score=38.19  Aligned_cols=70  Identities=21%  Similarity=0.222  Sum_probs=53.2

Q ss_pred             hhHHHHHHHHHHHHhhhcccccccchhhHHHHH-hHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheee
Q 042552           72 VKTVMLFGILNGISIGLLNLSLGFNSVGFYQMT-KLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIA  142 (179)
Q Consensus        72 ~~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~-k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~  142 (179)
                      ++..+|+.+=.++++.+ ...+...++|...-+ .+.+-.++++.++++.+|..+++++.++.+++.|+.++
T Consensus        42 ~~y~ipf~lNq~GSv~f-~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLF-FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            45677887777776633 445556666665555 46677888988988888899999999999999999875

Many members are annotated as potential transmembrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.39  E-value=0.25  Score=40.23  Aligned_cols=99  Identities=18%  Similarity=0.125  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHhhhcccccccchhhHHHH-HhHHHHHHHHHHHHHHhccccChhhh----hHHhHhhhhheeeeecCcc
Q 042552           74 TVMLFGILNGISIGLLNLSLGFNSVGFYQM-TKLAIIPFTVLLETLFLKKQFSQKIK----FSLFLLLVGVGIASVTDLQ  148 (179)
Q Consensus        74 ~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i-~k~~~~~~~~~~~~~~~~~~~s~~~~----~sl~li~~Gv~~~~~~d~~  148 (179)
                      --+.-+++.+..-.....|+++..+|-..= .-......+.+.+++++||..+...+    .+++++++|+.+++..|.+
T Consensus        47 ~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~  126 (269)
T PF06800_consen   47 VAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKK  126 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccc
Confidence            345556778888888888888875543221 12234556778889999998776665    4889999999999886643


Q ss_pred             c--------hHHHHHHHHHHHHHHHHHHHHHc
Q 042552          149 L--------NMVGTILSLLAIVTTCVGQIVSF  172 (179)
Q Consensus       149 ~--------~~~G~~~~l~s~~~~a~~~i~~~  172 (179)
                      -        ...|+...+.+.+.+..|.+..+
T Consensus       127 ~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~  158 (269)
T PF06800_consen  127 SDKSSSKSNMKKGILALLISTIGYWIYSVIPK  158 (269)
T ss_pred             ccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            2        25699999999999999988754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.21  E-value=1.4  Score=35.92  Aligned_cols=101  Identities=14%  Similarity=0.024  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCccCccchhHHHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHh
Q 042552           41 ATTLTSWHLMVTFCTLHAAQRLNFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFL  120 (179)
Q Consensus        41 p~~lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~  120 (179)
                      |....+=|..--.+...+.......+.++.+..+-+.-++.++..-.+...|-+.+-++..-.+..+.+.+..+.+.+++
T Consensus       164 ~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il  243 (269)
T PF06800_consen  164 GWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFIL  243 (269)
T ss_pred             hhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEE
Confidence            55555555433333333332222112222223344555666666666667777777666666666677777777889999


Q ss_pred             ccccChhhh----hHHhHhhhhhee
Q 042552          121 KKQFSQKIK----FSLFLLLVGVGI  141 (179)
Q Consensus       121 ~~~~s~~~~----~sl~li~~Gv~~  141 (179)
                      ||+-++++.    .++++++.|.++
T Consensus       244 ~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  244 KEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             EecCchhhHHHHHHHHHHHHHhhhc
Confidence            998777755    456666666544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=90.63  E-value=7.2  Score=32.12  Aligned_cols=71  Identities=11%  Similarity=0.220  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           74 TVMLFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        74 ~~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      -+...|...+.-..+-..+-+..|.+..-.+....|....+++.+++||+++..+..+-+++-.|.++.+.
T Consensus       213 LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         213 LLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34455677888888888899999999999999998888888899999999999999999988888776644

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=89.47  E-value=0.47  Score=39.50  Aligned_cols=71  Identities=13%  Similarity=0.118  Sum_probs=61.5

Q ss_pred             HHHHHHH-HHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           74 TVMLFGI-LNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        74 ~~lp~~l-~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      +++..|+ .+...=..+..|+.+.|-+..+=+-+.+.+..++++.++++||.++...++..+.++|..+...
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            4555664 4666778899999999999999999999999999999999999999999999999999766544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=88.60  E-value=0.78  Score=37.13  Aligned_cols=70  Identities=7%  Similarity=0.033  Sum_probs=56.0

Q ss_pred             hHHHHHHHHHHHH-----hhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheee
Q 042552           73 KTVMLFGILNGIS-----IGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIA  142 (179)
Q Consensus        73 ~~~lp~~l~~~~~-----~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~  142 (179)
                      ..+++.++.-..-     -.+...+++..|-+.+.++-+..|.+-.+.+..+++|+.|..+++++..++.+.+=.
T Consensus       206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            3566666543332     256778899999999999999998888888999999999999999999998876533

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=82.59  E-value=16  Score=26.52  Aligned_cols=113  Identities=17%  Similarity=0.109  Sum_probs=73.2

Q ss_pred             HHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHH---Hc-CCCccCccchhHHHHHHHHHHHHhhhcccccccchhhHH
Q 042552           26 VICNKALMSNLGFPFATTLTSWHLMVTFCTLHAAQ---RL-NFFESKAVDVKTVMLFGILNGISIGLLNLSLGFNSVGFY  101 (179)
Q Consensus        26 ~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i~~---~~-~~~~~~~~~~~~~lp~~l~~~~~~~~~n~sl~~~sv~~~  101 (179)
                      .-+|-.+-+..+  .|+.=++.-+....+.+.+..   +. +..+.++.|++.++ -+++-+..+.+++.+.....++..
T Consensus        17 ~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~   93 (138)
T PF04657_consen   17 AAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALT   93 (138)
T ss_pred             HHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHH
Confidence            446666655444  366667777777766655432   11 11112334444444 677778888888888888877777


Q ss_pred             HHHhHH-HHHHHHHHHHH----HhccccChhhhhHHhHhhhhhee
Q 042552          102 QMTKLA-IIPFTVLLETL----FLKKQFSQKIKFSLFLLLVGVGI  141 (179)
Q Consensus       102 ~i~k~~-~~~~~~~~~~~----~~~~~~s~~~~~sl~li~~Gv~~  141 (179)
                      +.+--. .....++++.+    .-+++++.++.+++.+++.|+.+
T Consensus        94 ~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   94 TILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            766644 44445666765    24578999999999999999853

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=82.54  E-value=23  Score=28.27  Aligned_cols=123  Identities=14%  Similarity=-0.002  Sum_probs=77.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHH-HHHc-CCCccCcc------chhHHHHHH
Q 042552            8 QLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHA-AQRL-NFFESKAV------DVKTVMLFG   79 (179)
Q Consensus         8 ~~~~~~~~~~~~~~S~~~~~~NK~ll~~~~f~~p~~lt~~q~~~~~~~~~i-~~~~-~~~~~~~~------~~~~~lp~~   79 (179)
                      .......++.-..+|..-..++++++.+.+  .|.-.--.|+-...+.... .... +..+.++.      +.. .+.+.
T Consensus       112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~-~~~~i  188 (244)
T PF04142_consen  112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWW-VWIVI  188 (244)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchH-HHHHH
Confidence            445566777788888888899999998765  3666666665554443332 2211 11111111      122 23333


Q ss_pred             HHHHHHhhhcccccccchhhHHHHHhHHHHHHHHHHHHHHhccccChhhhhHHh
Q 042552           80 ILNGISIGLLNLSLGFNSVGFYQMTKLAIIPFTVLLETLFLKKQFSQKIKFSLF  133 (179)
Q Consensus        80 l~~~~~~~~~n~sl~~~sv~~~~i~k~~~~~~~~~~~~~~~~~~~s~~~~~sl~  133 (179)
                      +.++.+=..-..-+||.+-=.-...-+.+..++.+++..+++.++|....++..
T Consensus       189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            455555556667788887556666666778888888999999999888776543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=81.49  E-value=7.2  Score=33.01  Aligned_cols=96  Identities=17%  Similarity=0.196  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHhhhcccccccchhhHHHHHhH-HHHHHHHHHHHHHhcccc---C----hhhhhHHhHhhhhheeeee--
Q 042552           75 VMLFGILNGISIGLLNLSLGFNSVGFYQMTKL-AIIPFTVLLETLFLKKQF---S----QKIKFSLFLLLVGVGIASV--  144 (179)
Q Consensus        75 ~lp~~l~~~~~~~~~n~sl~~~sv~~~~i~k~-~~~~~~~~~~~~~~~~~~---s----~~~~~sl~li~~Gv~~~~~--  144 (179)
                      -+.-+++.+..-.....|.++.-+|..+-+-. .+.....++..++++|-.   +    .....+++++++|+++.+.  
T Consensus        76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            34456667777777778888886666554332 234445566666777543   2    2345788899999999877  


Q ss_pred             --cCc---------cchHHHHHHHHHHHHHHHHHHHH
Q 042552          145 --TDL---------QLNMVGTILSLLAIVTTCVGQIV  170 (179)
Q Consensus       145 --~d~---------~~~~~G~~~~l~s~~~~a~~~i~  170 (179)
                        .|.         .....|+..++++.+..++|+..
T Consensus       156 ~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~  192 (345)
T PRK13499        156 QLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFA  192 (345)
T ss_pred             hhcccccccccccccchHhHHHHHHHHHHHHHHHHHH
Confidence              443         12368999999999999999843

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	179
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.93
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.67

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.93  E-value=9.4e-05  Score=51.10  Aligned_cols=71  Identities=20%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHhhhcccccccchhhHHHHH-hHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeeecC
Q 042552           76 MLFGILNGISIGLLNLSLGFNSVGFYQMT-KLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASVTD  146 (179)
Q Consensus        76 lp~~l~~~~~~~~~n~sl~~~sv~~~~i~-k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~~d  146 (179)
                      +...+++..+..+-+.++++.|++...-+ +...|..+.+.+.+++||++|..+++++.+++.|+......+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33344677788888999999999999877 889999999999999999999999999999999998765543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.67  E-value=2.4e-05  Score=56.32  Aligned_cols=69  Identities=20%  Similarity=0.149  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHhhhcccccccchhhHHHHH-hHHHHHHHHHHHHHHhccccChhhhhHHhHhhhhheeeee
Q 042552           76 MLFGILNGISIGLLNLSLGFNSVGFYQMT-KLAIIPFTVLLETLFLKKQFSQKIKFSLFLLLVGVGIASV  144 (179)
Q Consensus        76 lp~~l~~~~~~~~~n~sl~~~sv~~~~i~-k~~~~~~~~~~~~~~~~~~~s~~~~~sl~li~~Gv~~~~~  144 (179)
                      +...+++.++..+-+.++++.|.+....+ ....|.++++++++++||+++..+++++.++++|+.+...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            33345677888899999999999976666 8899999999999999999999999999999999987644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00