Citrus Sinensis ID: 042582

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEcccccEEEEEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEEEEEEEEccEEEEcccccccEEcccccEEEEEEEEEEcEEEccHHHHHHHHHcccccEEEEEEEEEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccccEEEEEEEEEEEcccccEEEEEEEEEEEEEEcccEEccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHccEEEEEEEEEEEEEEEEcccc
Coil and Loop (DISEMBL)
mhstdrlpvrstpqnqpikrhntaRYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLslrphrprifihefsipalaqpngfenaEIIFNVTarnsnqhvgiYFDSVegsvyyknqqvgatpladtffqepktttILHATLSGATLTVNSRRWMEFmhdrgqgkvgFRLEIKSTIRFQVSTWD
Flexible Loop (DISEMBL)
mhstdrlpvrstpqnqpikrhntaryYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDrgqgkvgfrleikstirfqvstwd
Low Complexity Region (SEG)
MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD
Disordered region (IsUnstruct)
***********************ARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQV****
Disordered Region (DISOPRED)
************************************TRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD
Disordered Region (DISEMBL)
****************PIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD
Disordered Region (DISPRO)
*************************YYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
O48915	219	Protein NDR1 OS=Arabidops	no	no	0.772	0.666	0.285	6e-10
Q9C615	416	Putative syntaxin-24 OS=A	no	no	0.455	0.206	0.361	1e-08

>sp|O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1

 Score = 63.9 bits (154), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 15/161 (9%)

Query: 37  TRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQ-PNGFENAEIIF 95
           T   +  C   LS +  AG+    L+LSLR  +P+  I  F IPAL + PN  +N  + F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 96  NVTARNSNQHVGIYFDSVEGSVYYKN-QQVGATPL-------ADTFFQEPKTTTILHATL 147
            V   N N+  GIY+D V  +    N  ++ ++ L          F+Q  K      A  
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKK----KAKK 123

Query: 148 SGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTW 188
            G    +N++  +  +   G     FRL++K+ +RF++  W
Sbjct: 124 WGQVKPLNNQTVLRAVLPNGSAV--FRLDLKTQVRFKIVFW 162

Involved in disease resistance. Required for resistance conferred by multiple R genes recognizing different bacterial and oomycete pathogen isolates like avirulent P.syringae or H.parasitica (downy mildew). Required for the establishment of hypersensitive response (HR) and systemic acquired resistance (SAR) after infection with the bacterial pathogen P.syringae DC3000 carrying avrRpt2. Required for resistance to the soilborne fungus V.longisporum. Interaction with RIN4 is required for the activation of the R gene RPS2 and RPS2-mediated resistance.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C615|SYP24_ARATH Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1

 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 8/94 (8%)

Query: 95  FNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTV 154
            N++ RNS   +GI++D  E +VYY NQ++GA P+   F+   K T +L A   G TL +
Sbjct: 33  LNLSIRNSKSSIGIHYDRFEATVYYMNQRLGAVPMP-LFYLGSKNTMLLRALFEGQTLVL 91

Query: 155 ---NSRRWMEFMHDRGQGKVGFRLEIKSTIRFQV 185
              N R+  +F  D+  G   +R+++K +I F+V
Sbjct: 92  LKGNERK--KFEDDQKTGV--YRIDVKLSINFRV 121

Vesicle trafficking protein that functions in the secretory pathway.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
255555011	227	signal transducer, putative [Ricinus com	0.994	0.828	0.651	3e-62
356575795	227	PREDICTED: protein NDR1-like [Glycine ma	1.0	0.832	0.585	6e-62
15234663	226	late embryogenesis abundant hydroxyproli	0.962	0.805	0.597	4e-61
356536063	227	PREDICTED: protein NDR1-like [Glycine ma	1.0	0.832	0.564	1e-60
224113907	223	predicted protein [Populus trichocarpa]	1.0	0.847	0.582	2e-60
224076389	209	predicted protein [Populus trichocarpa]	0.920	0.832	0.626	3e-60
297813909	226	hypothetical protein ARALYDRAFT_490170 [	0.962	0.805	0.576	5e-59
15220603	224	late embryogenesis abundant hydroxyproli	0.994	0.839	0.560	3e-58
297837255	224	hypothetical protein ARALYDRAFT_893326 [	0.994	0.839	0.560	5e-58
449454708	228	PREDICTED: protein NDR1-like [Cucumis sa	1.0	0.828	0.603	5e-56

>gi|255555011|ref|XP_002518543.1| signal transducer, putative [Ricinus communis] gi|223542388|gb|EEF43930.1| signal transducer, putative [Ricinus communis]

 Score =  243 bits (619), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 125/192 (65%), Positives = 153/192 (79%), Gaps = 4/192 (2%)

Query: 1   MHSTDRLPVR-STPQNQP---IKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGI 56
           M+++DRLPVR S P   P   IKRH+TARYYAHRV ESLTTRVSK +C  FL LL + G+
Sbjct: 1   MYTSDRLPVRQSGPSQNPNPTIKRHHTARYYAHRVHESLTTRVSKIICATFLILLFLVGL 60

Query: 57  ILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGS 116
           +LF+L+LSLRPHRPR+F+ +FSIP L QPNGFENA++IFNVT RNSNQH+G Y+  V GS
Sbjct: 61  VLFILWLSLRPHRPRVFLTDFSIPGLGQPNGFENAQVIFNVTVRNSNQHIGFYYGKVVGS 120

Query: 117 VYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLE 176
           VYYK  QVG T + D F+QEPK TT L+  LSGATLTV+S+RWM+F++ R QG+V F L+
Sbjct: 121 VYYKEMQVGYTQVLDQFYQEPKNTTALNGVLSGATLTVSSQRWMQFVNARAQGRVMFVLD 180

Query: 177 IKSTIRFQVSTW 188
           I S IRF+VSTW
Sbjct: 181 ISSDIRFKVSTW 192

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575795|ref|XP_003556022.1| PREDICTED: protein NDR1-like [Glycine max]

 Score =  242 bits (617), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 113/193 (58%), Positives = 146/193 (75%), Gaps = 4/193 (2%)

Query: 1   MHSTDRLPVRST--PQNQPIK--RHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGI 56
           MH+ D +PV     P  +P+K  RH+T RYYAHRV ESLTTRVSK +C  FL LL + G+
Sbjct: 1   MHNNDHIPVHHVQGPNPKPVKLNRHHTMRYYAHRVHESLTTRVSKMICATFLGLLFIVGL 60

Query: 57  ILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGS 116
           I F+L+LSLRPHRPR  IHEF+IP L Q +GFENA I F V+ARNSNQ++G+Y++S++G+
Sbjct: 61  ITFILWLSLRPHRPRFHIHEFNIPGLTQDSGFENAVITFKVSARNSNQNIGVYYESMDGA 120

Query: 117 VYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLE 176
           VYY++ ++G TPL   F+Q+PK TT +   LSGATLTV+S+RW EF  DR  G V FRLE
Sbjct: 121 VYYRDTKIGYTPLLYPFYQQPKNTTEVDGDLSGATLTVSSQRWSEFQSDRADGSVVFRLE 180

Query: 177 IKSTIRFQVSTWD 189
           + S IRF++STWD
Sbjct: 181 LTSVIRFKISTWD 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234663|ref|NP_192431.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|7267282|emb|CAB81064.1| putative protein [Arabidopsis thaliana] gi|332657092|gb|AEE82492.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  239 bits (609), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 110/184 (59%), Positives = 143/184 (77%), Gaps = 2/184 (1%)

Query: 7   LPVRSTP--QNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLS 64
           +P+R++P  + QP+KRH++A YYAHRVRESL+TR+SK +C +FL +L   G+I F+L+LS
Sbjct: 8   IPIRTSPVPRAQPMKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLS 67

Query: 65  LRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQV 124
           LRPHRPR  I +F +  L QP G ENA I FNVT  N NQH+G+YFDS+EGS+YYK+Q+V
Sbjct: 68  LRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRV 127

Query: 125 GATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQ 184
           G  PL + FFQ+P  TTI+  TL+GA+LTVNS RW EF +DR QG VGFRL+I STIRF+
Sbjct: 128 GLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFK 187

Query: 185 VSTW 188
           +  W
Sbjct: 188 LHRW 191

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536063|ref|XP_003536560.1| PREDICTED: protein NDR1-like [Glycine max]

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/193 (56%), Positives = 144/193 (74%), Gaps = 4/193 (2%)

Query: 1   MHSTDRLPVR----STPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGI 56
           MH+ D +PV     S P+   + RH+T RYY HRV ESLTTRVSK +C  FL LL + G+
Sbjct: 1   MHNNDHIPVHHVQGSNPKPVKLNRHHTMRYYVHRVHESLTTRVSKMICATFLGLLFIVGL 60

Query: 57  ILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGS 116
           I F+L+LSLRPHRPR  I EF++P L Q +GFENA I F V+ARNSNQ++G+Y++S++G+
Sbjct: 61  ITFILWLSLRPHRPRFHIQEFNLPGLTQNSGFENAVITFKVSARNSNQNIGVYYESMDGA 120

Query: 117 VYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLE 176
           VYY++Q++G+ PL   F+Q+PK TT +   LSGATLTV+S+RW EF  DR  G V FRLE
Sbjct: 121 VYYRDQKIGSKPLLYPFYQQPKNTTEVDGDLSGATLTVSSQRWSEFQSDRADGSVVFRLE 180

Query: 177 IKSTIRFQVSTWD 189
           + S IRF++STWD
Sbjct: 181 LTSVIRFKISTWD 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113907|ref|XP_002316611.1| predicted protein [Populus trichocarpa] gi|222859676|gb|EEE97223.1| predicted protein [Populus trichocarpa]

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/189 (58%), Positives = 142/189 (75%)

Query: 1   MHSTDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFV 60
           M ++ +LP     + +PIKRH++A YY +RVR+SLTTR+SK +C IFL+LL V GI +F+
Sbjct: 1   MSTSQQLPTHHQREPKPIKRHHSASYYVNRVRDSLTTRISKIICGIFLTLLFVGGIAVFI 60

Query: 61  LYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYK 120
            +LSLRPHRPRI I  F IP L QP+GFENAEI FNVTARN+N+ VG Y+DSVE  VYY+
Sbjct: 61  TWLSLRPHRPRILISNFFIPGLDQPDGFENAEISFNVTARNANRAVGYYYDSVEAFVYYR 120

Query: 121 NQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKST 180
           ++ +G+TPL D+F+QEPK TT L   L GATL VNS RW  F  D  +G V FRL++ + 
Sbjct: 121 DRAIGSTPLVDSFYQEPKNTTNLSKVLKGATLDVNSDRWRVFRKDFARGAVVFRLDVTAM 180

Query: 181 IRFQVSTWD 189
           IRF++STWD
Sbjct: 181 IRFKLSTWD 189

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076389|ref|XP_002304935.1| predicted protein [Populus trichocarpa] gi|222847899|gb|EEE85446.1| predicted protein [Populus trichocarpa]

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 109/174 (62%), Positives = 133/174 (76%)

Query: 16  QPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIH 75
           +P+KRH++A YY HR R+SLTTRVSK +C IFL+LL + GI  F+ +LSLRPHRPRI I 
Sbjct: 2   RPLKRHHSASYYVHRARDSLTTRVSKIICGIFLTLLFIVGIAAFIAWLSLRPHRPRIHIR 61

Query: 76  EFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQ 135
            F IP L QP GF+NAEIIFNVTARNSNQ +G Y+DSVE  V+Y+NQ +G  PL D+F+Q
Sbjct: 62  NFLIPGLDQPTGFDNAEIIFNVTARNSNQVIGYYYDSVEAFVHYRNQVIGYAPLVDSFYQ 121

Query: 136 EPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTWD 189
           EPK TTIL+  LSGATL V S  W EF +DR  G V FRL++   +RF+VSTWD
Sbjct: 122 EPKNTTILYKVLSGATLNVTSDSWSEFRNDRALGTVVFRLDVTGMVRFKVSTWD 175

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813909|ref|XP_002874838.1| hypothetical protein ARALYDRAFT_490170 [Arabidopsis lyrata subsp. lyrata] gi|297320675|gb|EFH51097.1| hypothetical protein ARALYDRAFT_490170 [Arabidopsis lyrata subsp. lyrata]

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 106/184 (57%), Positives = 141/184 (76%), Gaps = 2/184 (1%)

Query: 7   LPVRSTP--QNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLS 64
           +P+ ++P  + QP+KRH++A YYAHRVRESL+TR+SK +C +FL +L   G+I F+L+LS
Sbjct: 8   IPIHTSPVPRAQPMKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLS 67

Query: 65  LRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQV 124
           LRPHRPR  I +F +  L QP G ENA I FNVT  N NQH+G+YFDS++G +YYK+Q+V
Sbjct: 68  LRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMDGFIYYKDQRV 127

Query: 125 GATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQ 184
           G+ PL + FFQ+P  TTI+  TL+GA+LTVNS RW EF +DR QG VGFRL+I S IRF+
Sbjct: 128 GSIPLLNPFFQKPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSNIRFK 187

Query: 185 VSTW 188
           +  W
Sbjct: 188 LHRW 191

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220603|ref|NP_176369.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|4508081|gb|AAD21425.1| Hypothetical protein [Arabidopsis thaliana] gi|332195762|gb|AEE33883.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 1/189 (0%)

Query: 1   MHS-TDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILF 59
           MH+  D LPVRS P  +PI RH++A    HRV+ESLTTRVSK +C IFLSLLL  GII F
Sbjct: 1   MHNKVDSLPVRSNPSTRPISRHHSASNIVHRVKESLTTRVSKLICAIFLSLLLCLGIITF 60

Query: 60  VLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYY 119
           +L++SL+PHRPR+ I  FSI  L++P+GFE + I F +TA N NQ+VGIY+DS+EGSVYY
Sbjct: 61  ILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYY 120

Query: 120 KNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKS 179
           K +++G+T L + F+Q+PK T+ +   LS   + VN  RWME   DR QGK+ FRL+++S
Sbjct: 121 KEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRS 180

Query: 180 TIRFQVSTW 188
            IRF+V TW
Sbjct: 181 MIRFKVYTW 189

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297837255|ref|XP_002886509.1| hypothetical protein ARALYDRAFT_893326 [Arabidopsis lyrata subsp. lyrata] gi|297332350|gb|EFH62768.1| hypothetical protein ARALYDRAFT_893326 [Arabidopsis lyrata subsp. lyrata]

 Score =  229 bits (583), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 137/189 (72%), Gaps = 1/189 (0%)

Query: 1   MHS-TDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILF 59
           MH+  D LPVRS P  +PI RH +A    HRV+ESLTTRVSK +C IFLSLLL  GII F
Sbjct: 1   MHNKVDSLPVRSNPSTRPISRHQSANNIVHRVKESLTTRVSKLICAIFLSLLLCLGIITF 60

Query: 60  VLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYY 119
           +L++SLRPHRPR+ I  FSI  L++P+GFE + I F +TA N NQ+VGIY+DS+EGSVYY
Sbjct: 61  ILWISLRPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYY 120

Query: 120 KNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKS 179
           K +++G+T L + F+Q+PK T+ +   L    + V   RWME   DR QGK+ FRLE++S
Sbjct: 121 KEKRIGSTKLTNPFYQDPKNTSWVDGALGRPAMAVTKERWMEMERDRNQGKIVFRLEVRS 180

Query: 180 TIRFQVSTW 188
            IRF+V TW
Sbjct: 181 VIRFKVYTW 189

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454708|ref|XP_004145096.1| PREDICTED: protein NDR1-like [Cucumis sativus] gi|449471964|ref|XP_004153455.1| PREDICTED: protein NDR1-like [Cucumis sativus] gi|449488401|ref|XP_004158020.1| PREDICTED: protein NDR1-like [Cucumis sativus]

 Score =  222 bits (566), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 117/194 (60%), Positives = 154/194 (79%), Gaps = 5/194 (2%)

Query: 1   MHSTDRLPVR--STPQNQPI---KRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAG 55
           M+S   LPV    TP+  P    KRH++ARYYAHRV+ESLTTRVSK +C IFLSLLL+ G
Sbjct: 1   MNSPSHLPVHHTDTPEQHPTAPTKRHHSARYYAHRVKESLTTRVSKLICAIFLSLLLIIG 60

Query: 56  IILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEG 115
           II F+L+LSLRPHRPR FIH+F++  L+  NGFE+A+I+FN TARNSN ++GIY+D++ G
Sbjct: 61  IITFILWLSLRPHRPRFFIHDFTVTGLSLENGFESAQIVFNATARNSNLNIGIYYDAMSG 120

Query: 116 SVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRL 175
           SVYYK Q++G+TPL D++++ PKTT +L A LSGATL ++ +RWME  ++R +G V FRL
Sbjct: 121 SVYYKEQKIGSTPLLDSYYEGPKTTKVLTAALSGATLNIDRQRWMEISNERSKGVVVFRL 180

Query: 176 EIKSTIRFQVSTWD 189
           EI STIRF++S WD
Sbjct: 181 EITSTIRFRISAWD 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
TAIR|locus:2115638	226	AT4G05220 "AT4G05220" [Arabido	0.962	0.805	0.597	1.2e-58
TAIR|locus:2195783	224	AT1G61760 "AT1G61760" [Arabido	0.994	0.839	0.560	1.8e-55
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.756	0.55	0.302	7.9e-14
TAIR|locus:2098363	240	NHL2 "AT3G11650" [Arabidopsis	0.761	0.6	0.25	5.6e-13
TAIR|locus:2095685	206	AT3G44220 "AT3G44220" [Arabido	0.820	0.752	0.277	3.9e-12
TAIR|locus:504956450	210	AT5G22200 "AT5G22200" [Arabido	0.873	0.785	0.258	6.4e-12
TAIR|locus:2079879	208	AT3G52470 [Arabidopsis thalian	0.777	0.706	0.243	8.2e-12
TAIR|locus:2039632	243	AT2G27260 "AT2G27260" [Arabido	0.862	0.670	0.266	1e-11
TAIR|locus:2039185	227	YLS9 "AT2G35980" [Arabidopsis	0.735	0.612	0.230	1e-11
TAIR|locus:2062410	238	AT2G35460 "AT2G35460" [Arabido	0.719	0.571	0.283	1e-11

TAIR|locus:2115638 AT4G05220 "AT4G05220" [Arabidopsis thaliana (taxid:3702)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 110/184 (59%), Positives = 143/184 (77%)

Query:     7 LPVRSTP--QNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLS 64
             +P+R++P  + QP+KRH++A YYAHRVRESL+TR+SK +C +FL +L   G+I F+L+LS
Sbjct:     8 IPIRTSPVPRAQPMKRHHSASYYAHRVRESLSTRISKFICAMFLLVLFFVGVIAFILWLS 67

Query:    65 LRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQV 124
             LRPHRPR  I +F +  L QP G ENA I FNVT  N NQH+G+YFDS+EGS+YYK+Q+V
Sbjct:    68 LRPHRPRFHIQDFVVQGLDQPTGVENARIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRV 127

Query:   125 GATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQ 184
             G  PL + FFQ+P  TTI+  TL+GA+LTVNS RW EF +DR QG VGFRL+I STIRF+
Sbjct:   128 GLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFK 187

Query:   185 VSTW 188
             +  W
Sbjct:   188 LHRW 191

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2195783 AT1G61760 "AT1G61760" [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
 Identities = 106/189 (56%), Positives = 140/189 (74%)

Query:     1 MHS-TDRLPVRSTPQNQPIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILF 59
             MH+  D LPVRS P  +PI RH++A    HRV+ESLTTRVSK +C IFLSLLL  GII F
Sbjct:     1 MHNKVDSLPVRSNPSTRPISRHHSASNIVHRVKESLTTRVSKLICAIFLSLLLCLGIITF 60

Query:    60 VLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYY 119
             +L++SL+PHRPR+ I  FSI  L++P+GFE + I F +TA N NQ+VGIY+DS+EGSVYY
Sbjct:    61 ILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYY 120

Query:   120 KNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKS 179
             K +++G+T L + F+Q+PK T+ +   LS   + VN  RWME   DR QGK+ FRL+++S
Sbjct:   121 KEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRS 180

Query:   180 TIRFQVSTW 188
              IRF+V TW
Sbjct:   181 MIRFKVYTW 189

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 46/152 (30%), Positives = 78/152 (51%)

Query:    43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQPNGFENAEIIFNVT--AR 100
             L  +F+ L+++AGI   VLYL  RP  P+  I  FS+  +   N        FNVT  +R
Sbjct:    79 LAAVFI-LIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGI-NLNSTSPISPSFNVTVRSR 136

Query:   101 NSNQHVGIYFDSVEG-SVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRW 159
             N N  +G+Y++      VYY +  + +  +   F+Q  K  T++   LSG+ + + S   
Sbjct:   137 NGNGKIGVYYEKESSVDVYYNDVDI-SNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMR 195

Query:   160 MEFMHDRGQGKVGFRLEIKSTIRFQ---VSTW 188
              E  ++  +  V F+L+IK+ ++ +   V TW
Sbjct:   196 KEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTW 227

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2098363 NHL2 "AT3G11650" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 38/152 (25%), Positives = 79/152 (51%)

Query:    43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALA-QPNGFENAEIIFNVTARN 101
             +C I +++ ++ G+   +L+L  RP+  + ++ + ++   +  PN   +  +  N T RN
Sbjct:    55 ICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIRN 114

Query:   102 SNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTV--NSRRW 159
              NQ VG+Y+D    S YY +Q+ G+  ++ +F+Q  K TT++   + G  L V  +  R 
Sbjct:   115 PNQRVGVYYDEFSVSGYYGDQRFGSANVS-SFYQGHKNTTVILTKIEGQNLVVLGDGAR- 172

Query:   160 MEFMHDRGQGKVGFRLEIKSTIRFQ---VSTW 188
              +   D   G      +++ ++RF+   + +W
Sbjct:   173 TDLKDDEKSGIYRINAKLRLSVRFKFWFIKSW 204

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0051607 "defense response to virus" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2095685 AT3G44220 "AT3G44220" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 45/162 (27%), Positives = 79/162 (48%)

Query:    29 HRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPA--LAQPN 86
             H   E +  R+   L + FL+ +L    ++F+++  L PH PR  + + +I A  ++QPN
Sbjct:    10 HDEDEKMRKRIG-ALVLGFLAAVL---FVVFLVWAILHPHGPRFVLQDATIYAFNVSQPN 65

Query:    87 GFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHAT 146
              +  + +   +++RN N  +GI++D ++    Y+NQQV    L    +Q     TI    
Sbjct:    66 -YLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIWSPF 124

Query:   147 LSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTW 188
             L G T+ V          D   G V   ++I   +R++V TW
Sbjct:   125 LYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTW 166

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504956450 AT5G22200 "AT5G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 44/170 (25%), Positives = 82/170 (48%)

Query:    23 TARYY-AHRVRESLTTRVS-KTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIP 80
             T RY   H   E    R+  + +    L L++    ++F+++  L PH PR  + + +I 
Sbjct:     2 TGRYCDQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTIN 61

Query:    81 A--LAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPK 138
                ++QPN F ++ +   V++RN N  +GI++D ++  V Y+NQ+V    L  + +Q   
Sbjct:    62 DFNVSQPN-FLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHL 120

Query:   139 TTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQVSTW 188
               T+    L G+ + V          D   G V   ++I   +R++V +W
Sbjct:   121 EVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSW 170

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2079879 AT3G52470 [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 37/152 (24%), Positives = 75/152 (49%)

Query:    39 VSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPA--LAQPNGF-ENAEIIF 95
             V + LC   ++ +++  I +F++++ LRP +PR  + + ++ A  L+QPN    N ++  
Sbjct:    15 VVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQV-- 72

Query:    96 NVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVN 155
              + +RN N  +GIY+D +     Y NQQ+         +Q  K   +    + G  + + 
Sbjct:    73 TIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIA 132

Query:   156 SRRWMEFMHDRGQGKVGFRLEIKSTIRFQVST 187
                 +    ++ +G VG  +    T+R++V T
Sbjct:   133 PYNSVALGEEKDRGFVGLMIRADGTVRWKVRT 164

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2039632 AT2G27260 "AT2G27260" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 45/169 (26%), Positives = 82/169 (48%)

Query:    17 PIKRHNTARYYAHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHE 76
             P + HN   YYA +        + + L I+F + LL+ G+ILF+ +L +RP  P + ++ 
Sbjct:    40 PYQNHNP--YYAPQPNPRAV--IIRRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNS 95

Query:    77 FSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQE 136
              S+      N   + +    +  RN N  + +++++   ++YY    +  T L   F Q 
Sbjct:    96 LSVSNFNVSNNQVSGKWDLQLQFRNPNSKMSLHYETALCAMYYNRVSLSETRL-QPFDQG 154

Query:   137 PKTTTILHATLSGATLTVNSRRWMEFMHDRG-QGKVGFRLEIKSTIRFQ 184
              K  T+++ATLS +   V+ R       +R  +G V F L + S + F+
Sbjct:   155 KKDQTVVNATLSVSGTYVDGRLVDSIGKERSVKGNVEFDLRMISYVTFR 203

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2039185 YLS9 "AT2G35980" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 33/143 (23%), Positives = 68/143 (47%)

Query:    46 IFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPAL--AQPNGFENAEIIFNVTARNSN 103
             + +SL+++ G+   + +L +RP   +  + + S+       P+      +   V  RN N
Sbjct:    44 VIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPN 103

Query:   104 QHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTV-NSRRWMEF 162
             + +G+Y+D +E   YY+ ++     L   F+Q  K TT+L  T  G  L + N+ +    
Sbjct:   104 KRIGLYYDRIEAHAYYEGKRFSTITLTP-FYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL 162

Query:   163 MHDRGQGKVGFRLEIKSTIRFQV 185
               +R  G     ++ +  +RF++
Sbjct:   163 NAERISGVYNIEIKFRLRVRFKL 185

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0051707 "response to other organism" evidence=TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0010150 "leaf senescence" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2062410 AT2G35460 "AT2G35460" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 42/148 (28%), Positives = 77/148 (52%)

Query:    43 LCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALA-QPNGFE-NAEIIFNVTAR 100
             +C I + +L+  G++  +L+  LRP+  +  + E  +      P     +  I  N + R
Sbjct:    54 ICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIR 113

Query:   101 NSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTV---NSR 157
             N NQ +GI++D +E   YY +Q+  A  +  +F+Q  K TT++   L+G  L +     R
Sbjct:   114 NPNQRLGIHYDQLEVRGYYGDQRFSAANMT-SFYQGHKNTTVVGTELNGQKLVLLGAGGR 172

Query:   158 RWMEFMHDRGQGKVGFRLEIKSTIRFQV 185
             R  +F  DR  G   +R+++K  +RF++
Sbjct:   173 R--DFREDRRSGV--YRIDVK--LRFKL 194

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	189
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	3e-05

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 8/92 (8%)

Query: 96  NVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVN 155
            +  RN N    + +D +   + Y  Q++ +             TT L        +TV+
Sbjct: 1   TLRVRNPNS-FPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLE-----VPVTVS 54

Query: 156 SRRWMEFMHDRGQGKVGFRLEIKSTIRFQVST 187
                  +  +    VG  L      R +V  
Sbjct: 55  LDDLARLL--KDLLAVGLELPYTLRGRLKVGG 84

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
PLN03160	219	uncharacterized protein; Provisional	99.98
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.34
smart00769	100	WHy Water Stress and Hypersensitive response.	98.57
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.99
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.78
COG5608	161	LEA14-like dessication related protein [Defense me	97.69
PLN03160	219	uncharacterized protein; Provisional	89.78
PF06072	60	Herpes_US9: Alphaherpesvirus tegument protein US9;	85.27

>PLN03160 uncharacterized protein; Provisional

Probab=99.98  E-value=1e-30  Score=211.32  Aligned_cols=151  Identities=15%  Similarity=0.218  Sum_probs=125.5

Q ss_pred             cCCCccchhhhHHHHHHHHHHHHHHHHhheeeEEEecCCcEEEEEEeEEeeecCC-----CCceeEEEEEEEEEecCCCe
Q 042582           31 VRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQP-----NGFENAEIIFNVTARNSNQH  105 (189)
Q Consensus        31 ~r~~~~~~~~~~~~~~~~~~~~l~gi~~~i~~lvlrP~~P~f~V~~~sv~~~~~~-----~~~l~~~l~~~l~~~NPN~~  105 (189)
                      .|++||++||+|+|+++   ++++++++.++|+++|||+|+|+|+++++++|+++     +..+|++++++++++|||. 
T Consensus        31 ~~r~~~~~c~~~~~a~~---l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-  106 (219)
T PLN03160         31 TRRRNCIKCCGCITATL---LILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-  106 (219)
T ss_pred             cccccceEEHHHHHHHH---HHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-
Confidence            45566666766655544   34466777788899999999999999999999973     3467888999999999998 


Q ss_pred             eeEEEceeEEEEEECCEEeeCCCCCCceeeCCCceEEEEEEEEeceeecChHHHHHHhhhhcCCeEEEEEEEEEEEEEEE
Q 042582          106 VGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFRLEIKSTIRFQV  185 (189)
Q Consensus       106 ~~i~Y~~~~~~v~Y~g~~lg~~~~~p~f~q~~~~t~~v~~~l~~~~v~l~~~~~~~l~~d~~~G~v~l~v~~~~~vr~kv  185 (189)
                      ++|+|+++++.++|+|+.+|.+. +|+|+|++++++.+.+++......+.+.  .+|.+|..+|.++|+++++.+.++++
T Consensus       107 ~~~~Y~~~~~~v~Y~g~~vG~a~-~p~g~~~ar~T~~l~~tv~~~~~~~~~~--~~L~~D~~~G~v~l~~~~~v~gkVkv  183 (219)
T PLN03160        107 ASFKYSNTTTTIYYGGTVVGEAR-TPPGKAKARRTMRMNVTVDIIPDKILSV--PGLLTDISSGLLNMNSYTRIGGKVKI  183 (219)
T ss_pred             eeEEEcCeEEEEEECCEEEEEEE-cCCcccCCCCeEEEEEEEEEEeceeccc--hhHHHHhhCCeEEEEEEEEEEEEEEE
Confidence            89999999999999999999998 9999999999999999877665433332  56999999999999998888888888


Q ss_pred             EEe
Q 042582          186 STW  188 (189)
Q Consensus       186 g~~  188 (189)
                      |.+
T Consensus       184 ~~i  186 (219)
T PLN03160        184 LKI  186 (219)
T ss_pred             EEE
Confidence            744

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.34  E-value=5.6e-12  Score=89.03  Aligned_cols=83  Identities=27%  Similarity=0.381  Sum_probs=65.4

Q ss_pred             EEEEecCCCeeeEEEceeEEEEEECCEEee-CCCCCCceeeCCCceEEEEEEEEeceeecChHHHHHHhhhhcCCeEEEE
Q 042582           96 NVTARNSNQHVGIYFDSVEGSVYYKNQQVG-ATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFMHDRGQGKVGFR  174 (189)
Q Consensus        96 ~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg-~~~~~p~f~q~~~~t~~v~~~l~~~~v~l~~~~~~~l~~d~~~G~v~l~  174 (189)
                      +|+++|||. ++++|++++++++|+|+.+| ... .++|.|++++++.+.+.+..+...+    .+.+.++. .|...++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~-~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~~~~~~~   73 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGS-LPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-AGRVPFD   73 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEE-CE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-HTTSCEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccc-cCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-ccccceE
Confidence            589999999 99999999999999999999 554 8999999999999988776665333    45566666 6677777


Q ss_pred             EEEEEEEEEEE
Q 042582          175 LEIKSTIRFQV  185 (189)
Q Consensus       175 v~~~~~vr~kv  185 (189)
                      +.++++.++++
T Consensus        74 v~~~~~g~~~v   84 (101)
T PF03168_consen   74 VTYRIRGTFKV   84 (101)
T ss_dssp             EEEEEEEEEE-
T ss_pred             EEEEEEEEEEE
Confidence            77777777774

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.57  E-value=1e-06  Score=62.70  Aligned_cols=84  Identities=17%  Similarity=0.220  Sum_probs=64.4

Q ss_pred             CceeEEEEEEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCC-ceeeCCCceEEEEEEEEeceeecChHHHHHHhhh
Q 042582           87 GFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLAD-TFFQEPKTTTILHATLSGATLTVNSRRWMEFMHD  165 (189)
Q Consensus        87 ~~l~~~l~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p-~f~q~~~~t~~v~~~l~~~~v~l~~~~~~~l~~d  165 (189)
                      +..+..+.+.+.++|||. +++.|+.++..++|+|..+|++. .+ +...++++++.+.+.+..+ ..    ....+..+
T Consensus        11 ~~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~-~~~~~~ipa~~~~~v~v~~~~~-~~----~~~~~~~~   83 (100)
T smart00769       11 SGLEIEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGE-IPDSGTLPGNGRTVLDVPVTVN-LF----LAEALIWH   83 (100)
T ss_pred             cceEEEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEE-cCCCcEECCCCcEEEEEEEEee-hh----HhHHHHHh
Confidence            347899999999999998 79999999999999999999997 64 7899999999988888663 11    22344555


Q ss_pred             hcCCe-EEEEEEE
Q 042582          166 RGQGK-VGFRLEI  177 (189)
Q Consensus       166 ~~~G~-v~l~v~~  177 (189)
                      +.+|. ++++++.
T Consensus        84 l~~~~~~~y~l~g   96 (100)
T smart00769       84 IANGEEIPYRLDG   96 (100)
T ss_pred             hccCCCccEEEEE
Confidence            54443 4444433

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.99  E-value=0.0003  Score=57.36  Aligned_cols=83  Identities=13%  Similarity=0.119  Sum_probs=59.1

Q ss_pred             EecCCcEEEEEEeEEeeecC--CCCceeEEEEEEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCCc-eeeCCCceE
Q 042582           65 LRPHRPRIFIHEFSIPALAQ--PNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADT-FFQEPKTTT  141 (189)
Q Consensus        65 lrP~~P~f~V~~~sv~~~~~--~~~~l~~~l~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p~-f~q~~~~t~  141 (189)
                      +-||.-.++-.++......+  .++.+..++.-.|.+.|||. .++.-.++.+.++|....+|.+. ... ...++++.+
T Consensus        96 LfPRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv~~~~~VVG~~~-~~~~~~I~Prs~~  173 (238)
T PF07092_consen   96 LFPRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNF-YPVTVTNLSIQVLYMKTVVGKGK-NSNITVIGPRSSK  173 (238)
T ss_pred             EeCcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCE-EEEEEEeEEEEEEEEEeEEeeeE-ecceEEecccCCc
Confidence            34774444433333332222  35668899999999999997 89999999999999999999886 543 466777777


Q ss_pred             EEEEEEEe
Q 042582          142 ILHATLSG  149 (189)
Q Consensus       142 ~v~~~l~~  149 (189)
                      .+..++..
T Consensus       174 q~~~tV~t  181 (238)
T PF07092_consen  174 QVNYTVKT  181 (238)
T ss_pred             eEEEEeeE
Confidence            66665544

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.78  E-value=0.00015  Score=62.80  Aligned_cols=89  Identities=19%  Similarity=0.299  Sum_probs=56.6

Q ss_pred             cCCCccchhhhHHHHHHHHHHHHHHHHhheeeEEEecCCcEEEEEEeEEeeecC-CCCceeEEEEEEEEEecCCCeeeEE
Q 042582           31 VRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPHRPRIFIHEFSIPALAQ-PNGFENAEIIFNVTARNSNQHVGIY  109 (189)
Q Consensus        31 ~r~~~~~~~~~~~~~~~~~~~~l~gi~~~i~~lvlrP~~P~f~V~~~sv~~~~~-~~~~l~~~l~~~l~~~NPN~~~~i~  109 (189)
                      ++++||.+...|+.+.+++++++.|++.|++. .-+|      +.++.|..+.- -.+.-..-|++++.+.|||. +.|.
T Consensus       294 r~r~~~~r~~~c~~~~i~~lL~ig~~~gFv~A-ttKp------L~~v~v~~I~NVlaS~qELmfdl~V~A~NPn~-~~V~  365 (387)
T PF12751_consen  294 RQRSWFSRFASCIYLSILLLLVIGFAIGFVFA-TTKP------LTDVQVVSIQNVLASEQELMFDLTVEAFNPNW-FTVT  365 (387)
T ss_pred             ccccHHhhhhHHHHHHHHHHHHHHHHHHhhhh-cCcc------cccceEEEeeeeeeccceEEEeeEEEEECCCe-EEEE
Confidence            34567777666665555555444444444443 3444      34444443321 12334678899999999998 7999


Q ss_pred             EceeEEEEEECCEEeeCC
Q 042582          110 FDSVEGSVYYKNQQVGAT  127 (189)
Q Consensus       110 Y~~~~~~v~Y~g~~lg~~  127 (189)
                      .++.+++|+-+-..+|..
T Consensus       366 I~d~dldIFAKS~yvg~D  383 (387)
T PF12751_consen  366 IDDMDLDIFAKSRYVGTD  383 (387)
T ss_pred             eccceeeeEecCCccCcc
Confidence            999999999876666543

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.69  E-value=0.0016  Score=49.53  Aligned_cols=79  Identities=14%  Similarity=0.200  Sum_probs=63.8

Q ss_pred             CCcEEEEEEeEEeeecCCCCceeEEEEEEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCCceeeCCCceEEEEEEE
Q 042582           68 HRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATL  147 (189)
Q Consensus        68 ~~P~f~V~~~sv~~~~~~~~~l~~~l~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p~f~q~~~~t~~v~~~l  147 (189)
                      ++|...--.+..-....    ....+-.++.++|||. ++|-...++.+++-+|..+|.+....++..++++...+.+.+
T Consensus        31 ~~p~ve~~ka~wGkvt~----s~~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l  105 (161)
T COG5608          31 KKPGVESMKAKWGKVTN----SETEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPL  105 (161)
T ss_pred             CCCCceEEEEEEEEEec----cceEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEE
Confidence            55666555555544433    3578888999999998 799999999999999999999986788999999999999888


Q ss_pred             Eece
Q 042582          148 SGAT  151 (189)
Q Consensus       148 ~~~~  151 (189)
                      ..+.
T Consensus       106 ~~d~  109 (161)
T COG5608         106 RLDN  109 (161)
T ss_pred             EEeh
Confidence            6664

>PLN03160 uncharacterized protein; Provisional

Probab=89.78  E-value=2.5  Score=34.24  Aligned_cols=104  Identities=11%  Similarity=0.150  Sum_probs=50.1

Q ss_pred             ccccCCCccchhhhHHHHHHHHHHHHHHHHhheeeEEEecC--CcEEEEEEeEEee-------ecCC---C-CceeEEEE
Q 042582           28 AHRVRESLTTRVSKTLCIIFLSLLLVAGIILFVLYLSLRPH--RPRIFIHEFSIPA-------LAQP---N-GFENAEII   94 (189)
Q Consensus        28 ~~~~r~~~~~~~~~~~~~~~~~~~~l~gi~~~i~~lvlrP~--~P~f~V~~~sv~~-------~~~~---~-~~l~~~l~   94 (189)
                      .+|++..+||.|+..+..++.++++   ++++.++=-=+|+  .-.++++++.++.       +|++   + ..-|.|. 
T Consensus        31 ~~r~~~~~c~~~~~a~~l~l~~v~~---~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-  106 (219)
T PLN03160         31 TRRRNCIKCCGCITATLLILATTIL---VLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-  106 (219)
T ss_pred             cccccceEEHHHHHHHHHHHHHHHH---heeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-
Confidence            3555666556666666666633322   2333333334442  2355555555431       2221   0 1113444 


Q ss_pred             EEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCCceeeCCCceEE
Q 042582           95 FNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTI  142 (189)
Q Consensus        95 ~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p~f~q~~~~t~~  142 (189)
                      +.+..+  |..+.++|+...+.-    ..+..+. .++..+..-+.+.
T Consensus       107 ~~~~Y~--~~~~~v~Y~g~~vG~----a~~p~g~-~~ar~T~~l~~tv  147 (219)
T PLN03160        107 ASFKYS--NTTTTIYYGGTVVGE----ARTPPGK-AKARRTMRMNVTV  147 (219)
T ss_pred             eeEEEc--CeEEEEEECCEEEEE----EEcCCcc-cCCCCeEEEEEEE
Confidence            445554  344789997764432    2344444 5555555555553

>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses

Probab=85.27  E-value=0.23  Score=31.79  Aligned_cols=8  Identities=25%  Similarity=0.501  Sum_probs=3.6

Q ss_pred             HHHhheee
Q 042582           55 GIILFVLY   62 (189)
Q Consensus        55 gi~~~i~~   62 (189)
                      ++.+++.|
T Consensus        51 ~lG~~~~~   58 (60)
T PF06072_consen   51 GLGALVAW   58 (60)
T ss_pred             HHHHHhhc
Confidence            34444444

The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	189
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.41
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.22
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.18

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.41  E-value=2.2e-06  Score=66.06  Aligned_cols=101  Identities=12%  Similarity=0.138  Sum_probs=78.9

Q ss_pred             CCcEEEEEEeEEeeecCCCCceeEEEEEEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCC-ceeeCCCceEEEEEE
Q 042582           68 HRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLAD-TFFQEPKTTTILHAT  146 (189)
Q Consensus        68 ~~P~f~V~~~sv~~~~~~~~~l~~~l~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p-~f~q~~~~t~~v~~~  146 (189)
                      +.|.+++.++++.+++.    ....+.+.|+++|||. ..+.+..++.++.-+|..|+++. .+ ++..++++++.+.+.
T Consensus        43 ~~PeV~v~~v~~~~~~l----~~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~-s~~~~tIpa~g~~~v~Vp  116 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTR----DGVDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGT-IPDPGSLVGSGTTVLDVP  116 (174)
T ss_dssp             CCCEEEEEEEEEEEECS----SSEEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEE-ESCCCBCCSSEEEEEEEE
T ss_pred             CCCEEEEEEeEEecccc----ceEEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEe-cCCCceECCCCcEEEEEE
Confidence            78999999999998877    3588999999999998 79999999999999999999997 55 588999999999887


Q ss_pred             EEeceeecChHHHHHHhhhh-cCCeEEEEEEEEE
Q 042582          147 LSGATLTVNSRRWMEFMHDR-GQGKVGFRLEIKS  179 (189)
Q Consensus       147 l~~~~v~l~~~~~~~l~~d~-~~G~v~l~v~~~~  179 (189)
                      +...-     ....++.+++ ..+.++.++++..
T Consensus       117 v~v~~-----~~l~~~~~~l~~~~~i~Y~L~g~L  145 (174)
T 1yyc_A          117 VKVAY-----SIAVSLMKDMCTDWDIDYQLDIGL  145 (174)
T ss_dssp             EEESH-----HHHHHTCCCCCSSEEECEEEEEEE
T ss_pred             EEEEH-----HHHHHHHHhcCCCCccceEEEEEE
Confidence            75542     2223444454 3345666555543

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.22  E-value=1.1e-06  Score=66.16  Aligned_cols=102  Identities=13%  Similarity=0.142  Sum_probs=77.3

Q ss_pred             CCcEEEEEEeEEeeecCCCCceeEEEEEEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCC-ceeeCCCceEEEEEE
Q 042582           68 HRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLAD-TFFQEPKTTTILHAT  146 (189)
Q Consensus        68 ~~P~f~V~~~sv~~~~~~~~~l~~~l~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p-~f~q~~~~t~~v~~~  146 (189)
                      +.|.+++.++++.+++.    ....+.+.|+++|||. .++.+..++.++.-+|..++++. .+ ++..++++++.+.+.
T Consensus        20 ~~P~v~v~~v~~~~~~~----~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~-~~~~~~ipa~g~~~v~vp   93 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGK-IPDPGSLKAKDMTALDIP   93 (151)
T ss_dssp             CSCCCBCSEEEECCCTT----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEE-EEECCCCSSSSEEEEEEC
T ss_pred             CCCEEEEEEeEEeccCc----ceeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEe-cCCCcEECCCCcEEEEEE
Confidence            67999999999987766    4678999999999998 79999999999999999999997 54 588899999988876


Q ss_pred             EEeceeecChHHHHHHhhhh-cCCeEEEEEEEEEE
Q 042582          147 LSGATLTVNSRRWMEFMHDR-GQGKVGFRLEIKST  180 (189)
Q Consensus       147 l~~~~v~l~~~~~~~l~~d~-~~G~v~l~v~~~~~  180 (189)
                      +..+-     ....++.++. ..+.++.+++++..
T Consensus        94 v~v~~-----~~l~~~~~~l~~~~~i~Y~l~g~l~  123 (151)
T 1xo8_A           94 VVVPY-----SILFNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             CCEEH-----HHHHHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEH-----HHHHHHHHhcccCCcccEEEEEEEE
Confidence            64432     2223333342 34566666655544

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.18  E-value=2.2e-05  Score=58.03  Aligned_cols=73  Identities=15%  Similarity=0.101  Sum_probs=59.9

Q ss_pred             eEEEEEEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCCceeeCCCceEEEEEEEEeceeecChHHHHHHh
Q 042582           90 NAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLADTFFQEPKTTTILHATLSGATLTVNSRRWMEFM  163 (189)
Q Consensus        90 ~~~l~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p~f~q~~~~t~~v~~~l~~~~v~l~~~~~~~l~  163 (189)
                      ...+.+.|+++|||. +++.++.++.+++..|..+|++.....+..++.+.+.+.+.+..+...+.+...+.+.
T Consensus        17 ~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~   89 (136)
T 3but_A           17 QTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIA   89 (136)
T ss_dssp             EEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHH
T ss_pred             EEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhh
Confidence            578999999999997 7999999999999999999998645678999999888888887776555554334443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	189
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.33

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.33  E-value=2.3e-07  Score=68.14  Aligned_cols=104  Identities=13%  Similarity=0.129  Sum_probs=77.7

Q ss_pred             ecCCcEEEEEEeEEeeecCCCCceeEEEEEEEEEecCCCeeeEEEceeEEEEEECCEEeeCCCCCC-ceeeCCCceEEEE
Q 042582           66 RPHRPRIFIHEFSIPALAQPNGFENAEIIFNVTARNSNQHVGIYFDSVEGSVYYKNQQVGATPLAD-TFFQEPKTTTILH  144 (189)
Q Consensus        66 rP~~P~f~V~~~sv~~~~~~~~~l~~~l~~~l~~~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~~p-~f~q~~~~t~~v~  144 (189)
                      +-+.|.+++.++++.+++.    ...++.+.++++|||. +++..+.++.+++.+|..++++. .+ ++..++++++.+.
T Consensus        18 ~~~kPev~l~~v~i~~v~~----~~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~-~~~~~~ipa~~~~~v~   91 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNR----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGK-IPDPGSLKAKDMTALD   91 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTT----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEE-EEECCCCSSSSEEEEE
T ss_pred             CCCCCeEEEEEEEeeeccc----ceEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEe-cCCCcEEcCCCcEEEE
Confidence            4577999999999998877    3688999999999998 79999999999999999999987 54 5788999999988


Q ss_pred             EEEEeceeecChHHHHHHhhhh-cCCeEEEEEEEEEE
Q 042582          145 ATLSGATLTVNSRRWMEFMHDR-GQGKVGFRLEIKST  180 (189)
Q Consensus       145 ~~l~~~~v~l~~~~~~~l~~d~-~~G~v~l~v~~~~~  180 (189)
                      +.++..-     .....+.+++ ..+.++.+++....
T Consensus        92 vpv~v~~-----~~l~~~~~~i~~~~~i~Y~l~g~l~  123 (151)
T d1xo8a_          92 IPVVVPY-----SILFNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             ECCCEEH-----HHHHHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEEEH-----HHHHHHHHhhccCCCccEEEEEEEE
Confidence            7664431     1223344443 33445555444433