Citrus Sinensis ID: 042607


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
NLRKLKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVVVPTPTTKQRKSKSFGRKLLSCLACNN
ccccccccccccccHHHHHHHHHccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEcccccccEEEccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccHHHHcccHHHHHHHHHcccccccccccccccccccccccccccccccccccc
cHHHHHHHHccHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEcccccccEEcccccccccHHHHccccccccHHHHHHHHHHHHHcccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHEEEcccccccccccccHHHHHHHEccccc
NLRKLKYLKHFHQFDLhfkkdceegklpnyVVVEQRYFDllsvpanddhpshdvseGQKFVKEVYEALRSSPQWNEILFIITYdehggfydhvptpvtgvpspddivgpepynfkfdrlgvrvptifispwiqrgtftlpeptlklrdgeakedAKLTDFQQELVQMAATLngdykkdiyphklVEEMTVAEGAKYVEDAFKKFRGQCEKAeaegvdesqivvvptpttkqrksksfGRKLLSCLACNN
nlrklkylkhfhqfdlhfkkdceeGKLPNYVVVEQRYFDLLSvpanddhpshdVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIfispwiqrgtftlpeptLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAeaegvdesqivvvptpttkqrksksfgrkllsclacnn
NLRKLKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVVVPTPTTKQRKSKSFGRKLLSCLACNN
****LKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVP**************KFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTL************LTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQC*************V***************************
**RK*KYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRG*********************************KLLSCLACN*
NLRKLKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQ*********DESQIVVVPT***********GRKLLSCLACNN
NLRKLKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVVVPT*******SKSFGRKLLSCLACNN
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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NLRKLKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTLPEPTLKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKLVEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGVDESQIVVVPTPTTKQRKSKSFGRKLLSCLACNN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query249 2.2.26 [Sep-21-2011]
P06200 730 Hemolytic phospholipase C yes no 0.429 0.146 0.351 4e-09
Q9RGS8 700 Non-hemolytic phospholipa no no 0.429 0.152 0.292 6e-08
P95245517 Phospholipase C 3 OS=Myco yes no 0.337 0.162 0.362 1e-05
P95246521 Phospholipase C 2 OS=Myco no no 0.445 0.213 0.302 3e-05
Q04001520 Phospholipase C 1 OS=Myco no no 0.413 0.198 0.305 0.0002
>sp|P06200|PHLC_PSEAE Hemolytic phospholipase C OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=plcH PE=3 SV=2 Back     alignment and function desciption
 Score = 62.0 bits (149), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 24/131 (18%)

Query: 17  HFKKDCEEGKLP--NYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQ- 73
             +KD +E  LP  +++V    Y +         HP    S G+ +V  V EAL S+P+ 
Sbjct: 296 QLRKDVQENTLPQVSWIVAPYCYCE---------HPWWGPSFGEYYVTRVLEALTSNPEV 346

Query: 74  WNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFD---------RLGVRVP 124
           W   +FI+ YDE  GFYDH   P   VP   D VG    +   +          LG RVP
Sbjct: 347 WARTVFILNYDEGDGFYDHASAP---VPPWKDGVGLSTVSTAGEIEVSSGLPIGLGHRVP 403

Query: 125 TIFISPWIQRG 135
            I ISPW + G
Sbjct: 404 LIAISPWSKGG 414




Hydrolyzes sphingomyelin in addition to phosphatidylcholine.
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 3
>sp|Q9RGS8|PHLN_BURPS Non-hemolytic phospholipase C OS=Burkholderia pseudomallei (strain K96243) GN=plcN PE=1 SV=2 Back     alignment and function description
>sp|P95245|PHLC_MYCTU Phospholipase C 3 OS=Mycobacterium tuberculosis GN=plcC PE=3 SV=2 Back     alignment and function description
>sp|P95246|PHLB_MYCTU Phospholipase C 2 OS=Mycobacterium tuberculosis GN=plcB PE=1 SV=2 Back     alignment and function description
>sp|Q04001|PHLA_MYCTU Phospholipase C 1 OS=Mycobacterium tuberculosis GN=plcA PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
359489132 509 PREDICTED: phospholipase C 3-like isofor 1.0 0.489 0.575 1e-94
359489134 513 PREDICTED: phospholipase C 3-like isofor 1.0 0.485 0.575 3e-93
297744793 487 unnamed protein product [Vitis vinifera] 1.0 0.511 0.575 5e-93
356504452 523 PREDICTED: non-hemolytic phospholipase C 0.991 0.472 0.560 8e-89
255637093 523 unknown [Glycine max] 0.991 0.472 0.557 3e-88
356558928 517 PREDICTED: phospholipase C 3-like [Glyci 0.987 0.475 0.552 7e-87
449442455 529 PREDICTED: phospholipase C 3-like [Cucum 0.995 0.468 0.538 2e-86
224124040 536 predicted protein [Populus trichocarpa] 1.0 0.464 0.537 2e-86
255566038 525 Phospholipase C 3 precursor, putative [R 1.0 0.474 0.530 5e-85
449528241 404 PREDICTED: LOW QUALITY PROTEIN: phosphol 0.991 0.611 0.527 8e-84
>gi|359489132|ref|XP_003633883.1| PREDICTED: phospholipase C 3-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  351 bits (901), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 176/306 (57%), Positives = 210/306 (68%), Gaps = 57/306 (18%)

Query: 1   NLRKLKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKF 60
           NLRKLKY+ +FHQFDL FK+ CEEGKLPNYVV+EQRYFD   +PANDDHPSHDVS+GQKF
Sbjct: 204 NLRKLKYIDNFHQFDLDFKRHCEEGKLPNYVVIEQRYFDTKLLPANDDHPSHDVSQGQKF 263

Query: 61  VKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLG 120
           VK VYEALR+SPQWN+ILF+I YDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNF+FDRLG
Sbjct: 264 VKHVYEALRASPQWNDILFVIIYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFRFDRLG 323

Query: 121 VRVPTIFISPWIQRGTF----TLPEPT--------------------------------- 143
           VRVP I ISPWI+RGT     + P PT                                 
Sbjct: 324 VRVPAILISPWIERGTVLHGPSGPYPTSEFEHSSIPATVKKLFNLKEFLTKRDAWAGTFE 383

Query: 144 -------------------LKLRDGEAKEDAKLTDFQQELVQMAATLNGDYKKDIYPHKL 184
                              +KLR+ EAK++A+L++FQQELVQMAA L GD++KDIYPHKL
Sbjct: 384 GVLTRETPRTDCPVTLPEPVKLRETEAKDEAELSEFQQELVQMAAALKGDHRKDIYPHKL 443

Query: 185 VEEMTVAEGAKYVEDAFKKFRGQCEKAEAEGV-DESQIVVVPTPTTKQRKSKSFGRKLLS 243
           V++M V++  KYV +AF +F  +C+KA+  G  D S IV+ P    K+  SKSF  KL S
Sbjct: 444 VQDMNVSDATKYVNNAFNQFLDECQKAKTSGTHDSSDIVLCPQTPPKRTSSKSFAHKLFS 503

Query: 244 CLACNN 249
           CL C++
Sbjct: 504 CLICDH 509




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489134|ref|XP_002265749.2| PREDICTED: phospholipase C 3-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297744793|emb|CBI38061.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356504452|ref|XP_003521010.1| PREDICTED: non-hemolytic phospholipase C-like [Glycine max] Back     alignment and taxonomy information
>gi|255637093|gb|ACU18878.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356558928|ref|XP_003547754.1| PREDICTED: phospholipase C 3-like [Glycine max] Back     alignment and taxonomy information
>gi|449442455|ref|XP_004138997.1| PREDICTED: phospholipase C 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224124040|ref|XP_002319230.1| predicted protein [Populus trichocarpa] gi|222857606|gb|EEE95153.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255566038|ref|XP_002524007.1| Phospholipase C 3 precursor, putative [Ricinus communis] gi|223536734|gb|EEF38375.1| Phospholipase C 3 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449528241|ref|XP_004171114.1| PREDICTED: LOW QUALITY PROTEIN: phospholipase C 3-like, partial [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query249
TAIR|locus:2099654523 NPC3 "non-specific phospholipa 0.566 0.269 0.732 1.9e-85
TAIR|locus:2099639538 NPC4 "non-specific phospholipa 0.546 0.252 0.860 4e-83
TAIR|locus:2096384521 NPC5 "non-specific phospholipa 0.546 0.261 0.823 4.6e-78
TAIR|locus:2007357533 NPC1 "non-specific phospholipa 0.566 0.264 0.697 5.3e-71
TAIR|locus:2039563514 NPC2 "non-specific phospholipa 0.546 0.264 0.676 3.7e-70
TAIR|locus:2114470520 NPC6 "non-specific phospholipa 0.546 0.261 0.720 2.3e-68
ASPGD|ASPL0000031238508 AN8546 [Emericella nidulans (t 0.518 0.253 0.435 2.8e-24
ASPGD|ASPL0000065031455 plcB [Emericella nidulans (tax 0.453 0.248 0.443 3.5e-24
ASPGD|ASPL0000049651466 AN2336 [Emericella nidulans (t 0.461 0.246 0.427 1.5e-19
UNIPROTKB|P95246521 plcB "Phospholipase C 2" [Myco 0.453 0.216 0.356 3.6e-07
TAIR|locus:2099654 NPC3 "non-specific phospholipase C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 601 (216.6 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
 Identities = 104/142 (73%), Positives = 122/142 (85%)

Query:     1 NLRKLKYLKHFHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKF 60
             N+RKLKY+ +FHQ+ L FK+ C+EGKLPNYVV+E RYF +LS PANDDHP +DV EGQ  
Sbjct:   216 NMRKLKYVDNFHQYHLSFKRHCKEGKLPNYVVIEPRYFKILSAPANDDHPKNDVVEGQNL 275

Query:    61 VKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLG 120
             VKE+YEALR+SPQWNEILF++ YDEHGG+YDHVPTPV GVP+PD +VGPEPYNFKFDRLG
Sbjct:   276 VKEIYEALRASPQWNEILFVVVYDEHGGYYDHVPTPVIGVPNPDGLVGPEPYNFKFDRLG 335

Query:   121 VRVPTIFISPWIQRGTFTLPEP 142
             VRVP + ISPWI+ GT  L EP
Sbjct:   336 VRVPALLISPWIEPGT-VLHEP 356


GO:0005886 "plasma membrane" evidence=ISM
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA;ISS
GO:0005773 "vacuole" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0004629 "phospholipase C activity" evidence=IDA
GO:0006796 "phosphate-containing compound metabolic process" evidence=IDA
GO:0016036 "cellular response to phosphate starvation" evidence=IEP
GO:0052642 "lysophosphatidic acid phosphatase activity" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
TAIR|locus:2099639 NPC4 "non-specific phospholipase C4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096384 NPC5 "non-specific phospholipase C5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007357 NPC1 "non-specific phospholipase C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039563 NPC2 "non-specific phospholipase C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2114470 NPC6 "non-specific phospholipase C6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000031238 AN8546 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000065031 plcB [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000049651 AN2336 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|P95246 plcB "Phospholipase C 2" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!
3rd Layer3.1.4.3LOW CONFIDENCE prediction!
3rd Layer3.1.3.2LOW CONFIDENCE prediction!
3rd Layer3.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
pfam04185357 pfam04185, Phosphoesterase, Phosphoesterase family 2e-49
TIGR03397483 TIGR03397, acid_phos_Burk, acid phosphatase, Burkh 1e-14
TIGR03396 689 TIGR03396, PC_PLC, phospholipase C, phosphocholine 2e-14
COG3511527 COG3511, PlcC, Phospholipase C [Cell envelope biog 2e-10
>gnl|CDD|217948 pfam04185, Phosphoesterase, Phosphoesterase family Back     alignment and domain information
 Score =  165 bits (420), Expect = 2e-49
 Identities = 66/138 (47%), Positives = 81/138 (58%), Gaps = 19/138 (13%)

Query: 1   NLRKLKYLKHFHQFDL-HFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSE-GQ 58
           + R  K  +  HQ+DL  FKKD + GKLP    V           AND+HP HDV   GQ
Sbjct: 215 DARAGKADRAGHQYDLSDFKKDVKNGKLPQVSWVIPN-------GANDEHPGHDVIAAGQ 267

Query: 59  KFVKEVYEALRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDR 118
           K++K V EAL +SPQWN+ L I+TYDE+GGFYDHV  PV+  P+P          F    
Sbjct: 268 KWIKNVLEALLASPQWNKTLLIVTYDENGGFYDHVKPPVSPRPNP----------FGPYG 317

Query: 119 LGVRVPTIFISPWIQRGT 136
           LG RVPT+ ISPW + GT
Sbjct: 318 LGPRVPTLVISPWAKGGT 335


This family includes both bacterial phospholipase C enzymes EC:3.1.4.3, but also eukaryotic acid phosphatases EC:3.1.3.2. Length = 357

>gnl|CDD|234196 TIGR03397, acid_phos_Burk, acid phosphatase, Burkholderia-type Back     alignment and domain information
>gnl|CDD|234195 TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type Back     alignment and domain information
>gnl|CDD|226042 COG3511, PlcC, Phospholipase C [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 249
TIGR03396 690 PC_PLC phospholipase C, phosphocholine-specific, P 100.0
PF04185376 Phosphoesterase: Phosphoesterase family; InterPro: 100.0
TIGR03397483 acid_phos_Burk acid phosphatase, Burkholderia-type 99.98
COG3511527 PlcC Phospholipase C [Cell envelope biogenesis, ou 99.96
COG3511527 PlcC Phospholipase C [Cell envelope biogenesis, ou 97.52
TIGR03417500 chol_sulfatase choline-sulfatase. 94.57
PF00884308 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphata 94.54
PRK13759485 arylsulfatase; Provisional 93.49
PRK11598545 putative metal dependent hydrolase; Provisional 88.92
COG3119475 AslA Arylsulfatase A and related enzymes [Inorgani 88.22
KOG3867528 consensus Sulfatase [General function prediction o 86.19
PRK12363 703 phosphoglycerol transferase I; Provisional 85.72
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type Back     alignment and domain information
Probab=100.00  E-value=3.1e-43  Score=352.81  Aligned_cols=164  Identities=24%  Similarity=0.493  Sum_probs=141.9

Q ss_pred             hHHHHHhcCCCCCeEEEeccccCCCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCcC-cCceEEEEEEeCCCCccccCCC
Q 042607           17 HFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPSHDVSEGQKFVKEVYEALRSSPQ-WNEILFIITYDEHGGFYDHVPT   95 (249)
Q Consensus        17 ~F~~D~~~G~LP~vSfI~P~~~d~~~~~~nd~HP~~dv~~G~~~l~~v~eAL~~sP~-W~~TliIITyDE~GGfyDHV~P   95 (249)
                      +|++|+++|+||+||||+|+++       +||||++++..|++||++||+||++||+ |++|||||||||||||||||+|
T Consensus       276 ~f~~Dv~~g~LP~VS~I~p~~~-------~seHP~~~~~~G~~~i~~vl~aL~~nP~vW~~TvliItyDE~gGffDHV~P  348 (690)
T TIGR03396       276 QLRADVQAGTLPQVSWIVAPAA-------YSEHPGSSPAYGAWYVSRVLDALTANPEVWSKTVLLLNYDENDGFFDHVPP  348 (690)
T ss_pred             HHHHHHHcCCCCeEEEEecCCC-------CCCCCCCChHHHHHHHHHHHHHHHhChhhhhceEEEEEEeCCCCcccCcCC
Confidence            8999999999999999999874       7999999999999999999999999997 9999999999999999999999


Q ss_pred             CCCCCCCCCCCC------CCCCCCC----------CCCCCcCceeeEEEccCCCCCeEec----Cccccc-cccCCcccC
Q 042607           96 PVTGVPSPDDIV------GPEPYNF----------KFDRLGVRVPTIFISPWIQRGTFTL----PEPTLK-LRDGEAKED  154 (249)
Q Consensus        96 P~~~~p~pDg~~------g~~p~~f----------~f~~lG~RVP~ivISPw~k~G~V~~----~~~vl~-lr~~~~~~~  154 (249)
                      |.++.+.+++..      +...+.+          .+.|+|+|||+||||||+|+|+|..    ++|||| ||++.+..+
T Consensus       349 P~~p~~~~~~~~~g~~t~~~~~e~~~~~~~~~~~~~p~GlG~RVP~iVISPwsrgG~V~s~~~DHtSvLrflE~~fgl~~  428 (690)
T TIGR03396       349 PVPPSYNADGTSAGKSTLDTAGEYFDVPDPAEARGRPIGLGPRVPMYVISPWSKGGWVNSQVFDHTSVLRFLEKRFGVRE  428 (690)
T ss_pred             CCCCCcccccccccccccCCCccccccccccccccCcCCccceeeEEEECCCCCCCcccCccccHHHHHHHHHHHhCCCC
Confidence            998766555432      1111111          2458999999999999999999974    589988 888888999


Q ss_pred             CCCCccHHHHH-HHhhhhcCCCCCCCC-ccccCCcc
Q 042607          155 AKLTDFQQELV-QMAATLNGDYKKDIY-PHKLVEEM  188 (249)
Q Consensus       155 ~~ls~~~~~l~-~la~~l~~~~~~~~~-p~~l~~~~  188 (249)
                      ++||.||++.+ +|+++|++.....+. | .||.+.
T Consensus       429 ~nis~wRra~~gDLtsafdf~~p~~~~~p-~lp~~~  463 (690)
T TIGR03396       429 PNISPWRRAVCGDLTSAFDFSRPDTTPFP-ALPDTS  463 (690)
T ss_pred             cccChhhhcccccHHHhcCCCCCCcccCC-CCCCcc
Confidence            99999999977 999999999987664 5 477655



Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.

>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3 Back     alignment and domain information
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type Back     alignment and domain information
>COG3511 PlcC Phospholipase C [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG3511 PlcC Phospholipase C [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03417 chol_sulfatase choline-sulfatase Back     alignment and domain information
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3 Back     alignment and domain information
>PRK13759 arylsulfatase; Provisional Back     alignment and domain information
>PRK11598 putative metal dependent hydrolase; Provisional Back     alignment and domain information
>COG3119 AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3867 consensus Sulfatase [General function prediction only] Back     alignment and domain information
>PRK12363 phosphoglycerol transferase I; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query249
2d1g_A498 Acid phosphatase; ACPA, decavanadate vanadate, hyd 7e-29
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp} Length = 498 Back     alignment and structure
 Score =  112 bits (281), Expect = 7e-29
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 12  HQFDL-HFKKDCEEGKLPNYVVVEQRYFDLLSVP--ANDDHPSH-DVSEGQKFVKEVYEA 67
           HQ+D+  F K  ++  +P    +               D H  + +  + Q+++      
Sbjct: 319 HQYDISEFWKALDQNNMPAVSYL---------KAPGYQDGHGGYSNPLDEQEWLVNTINR 369

Query: 68  LRSSPQWNEILFIITYDEHGGFYDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIF 127
           ++ S  W+    II YD+  G YDHV +P +         G           G R+P + 
Sbjct: 370 IQQSKDWDSTAIIIIYDDSDGDYDHVYSPKSQFSDIKGRQG----------YGPRLPMLV 419

Query: 128 ISPWIQRGT 136
           ISP+ +   
Sbjct: 420 ISPYAKANY 428


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
2d1g_A498 Acid phosphatase; ACPA, decavanadate vanadate, hyd 100.0
3lxq_A450 Uncharacterized protein VP1736; alkaline, phosphat 97.02
4fdi_A502 N-acetylgalactosamine-6-sulfatase; glycoprotein, e 96.28
2qzu_A491 Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfata 95.73
3ed4_A502 Arylsulfatase; structural genomics, PSI-2, protein 95.39
3b5q_A482 Putative sulfatase YIDJ; NP_810509.1, structural g 95.17
2vqr_A543 Putative sulfatase; phosphonate monoester hydrolas 94.86
1fsu_A492 N-acetylgalactosamine-4-sulfatase; glycosaminoglyc 94.83
1p49_A562 Steryl-sulfatase; steroid biosynthesis, steroid su 94.12
1auk_A489 Arylsulfatase A; cerebroside-3-sulfate hydrolysis, 93.86
1hdh_A536 Arylsulfatase; hydrolase, formylglycine hydrate; 1 93.81
2w8d_A436 Processed glycerol phosphate lipoteichoic acid SY; 92.82
2w5q_A424 Processed glycerol phosphate lipoteichoic acid syn 92.43
3m7v_A413 Phosphopentomutase; structural genomics, nysgrc, c 91.81
2w5v_A375 Alkaline phosphatase; psychrophiles, cold adaptati 85.84
>2d1g_A Acid phosphatase; ACPA, decavanadate vanadate, hydrolase; HET: DVT ETE PGE; 1.75A {Francisella tularensis subsp} Back     alignment and structure
Probab=100.00  E-value=2.6e-37  Score=299.71  Aligned_cols=147  Identities=18%  Similarity=0.356  Sum_probs=123.0

Q ss_pred             cCcchHhHHHHHhcCCCCCeEEEeccccCCCCCCCCCCCCC-CChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCc
Q 042607           11 FHQFDLHFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDHPS-HDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGF   89 (249)
Q Consensus        11 f~~~~~~F~~D~~~G~LP~vSfI~P~~~d~~~~~~nd~HP~-~dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGf   89 (249)
                      ++.++ +|++|+++|+||+||||+|+++       +|+||+ +++.+|++||++||++|++||+|++|||||||||+|||
T Consensus       320 ~~~l~-~F~~d~~~g~LP~vs~i~p~~~-------~d~Hp~~~~~~~g~~~v~~v~~al~~sp~W~~T~iiit~DE~~G~  391 (498)
T 2d1g_A          320 QYDIS-EFWKALDQNNMPAVSYLKAPGY-------QDGHGGYSNPLDEQEWLVNTINRIQQSKDWDSTAIIIIYDDSDGD  391 (498)
T ss_dssp             EEEHH-HHHHHHHTTCCCSEEEEECCGG-------GSCCTTTCCHHHHHHHHHHHHHHHHTSTTGGGEEEEEEESCCTTC
T ss_pred             cCCHH-HHHHHHHcCCCCceEEEEcCCC-------CCCCCCCCChHHHHHHHHHHHHHHhcCccccCcEEEEEEECCCCC
Confidence            34455 8999999999999999999875       699999 58999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCCCCeEec----Cccccc-cccCCcccCCCCCcc-HHH
Q 042607           90 YDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFTL----PEPTLK-LRDGEAKEDAKLTDF-QQE  163 (249)
Q Consensus        90 yDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k~G~V~~----~~~vl~-lr~~~~~~~~~ls~~-~~~  163 (249)
                      ||||+||..+.   .|       .+++.|+|.|||+||||||+|+|+|..    ++|||| |+...+  .+.|+.| +++
T Consensus       392 ~DHV~pP~~p~---~G-------~~~~~GlG~RVP~~viSP~~k~G~V~~~~~dH~Silrtie~~~g--l~~l~~~~~da  459 (498)
T 2d1g_A          392 YDHVYSPKSQF---SD-------IKGRQGYGPRLPMLVISPYAKANYVDHSLLNQASVLKFIEYNWG--IGSVSKYSNDK  459 (498)
T ss_dssp             CCCCCCCCCTT---TT-------STTCCCCCCBCCEEEESTTBCTTEEECCCEETHHHHHHHHHHHT--CCCSCTTCGGG
T ss_pred             ccCcCCCCcCC---CC-------ccCccCCCCcceEEEecCCCCCCceeCCccchhHHHHHHHHHhC--CCCCCcccccc
Confidence            99999998742   23       234468899999999999999999974    588866 665332  3378887 445


Q ss_pred             HH-HHhhhhcCCCCC
Q 042607          164 LV-QMAATLNGDYKK  177 (249)
Q Consensus       164 l~-~la~~l~~~~~~  177 (249)
                      .+ +|+++|++....
T Consensus       460 ~a~~l~~~F~F~~~p  474 (498)
T 2d1g_A          460 YSNNILNMFDFNKEQ  474 (498)
T ss_dssp             GCCCSGGGBCSSCSS
T ss_pred             cccCHHHHhCCCCCC
Confidence            44 899999998853



>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus} Back     alignment and structure
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A* Back     alignment and structure
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis} Back     alignment and structure
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli} Back     alignment and structure
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2vqr_A Putative sulfatase; phosphonate monoester hydrolase, hydrolase, plasmid, formylglycine, phosphodiesterase; 1.42A {Rhizobium leguminosarum BV} PDB: 2w8s_A Back     alignment and structure
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2 Back     alignment and structure
>1p49_A Steryl-sulfatase; steroid biosynthesis, steroid sulfatase, estrone sulfate, dehydroepiandrosterone sulfate, human placental enzyme; HET: ALS BOG NAG; 2.60A {Homo sapiens} SCOP: c.76.1.2 Back     alignment and structure
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P* Back     alignment and structure
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2 Back     alignment and structure
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis} Back     alignment and structure
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A* Back     alignment and structure
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans} Back     alignment and structure
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query249
d1auka_485 Arylsulfatase A {Human (Homo sapiens) [TaxId: 9606 96.16
d1fsua_492 Arylsulfatase B (4-sulfatase) {Human (Homo sapiens 96.11
d1hdha_525 Arylsulfatase B (4-sulfatase) {Pseudomonas aerugin 95.51
d1p49a_553 Steryl-sulfatase {Human (Homo sapiens) [TaxId: 960 95.47
d2i09a1283 Phosphopentomutase DeoB {Streptococcus mutans [Tax 86.45
>d1auka_ c.76.1.2 (A:) Arylsulfatase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Alkaline phosphatase-like
superfamily: Alkaline phosphatase-like
family: Arylsulfatase
domain: Arylsulfatase A
species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.16  E-value=0.0058  Score=53.64  Aligned_cols=114  Identities=15%  Similarity=0.064  Sum_probs=66.7

Q ss_pred             hHHHHHhcCCCCCeEEEeccccCCCCCCCCCCC--CC-----CChhHHHHHHHHHHHHHhcCcCcCceEEEEEEeCCCCc
Q 042607           17 HFKKDCEEGKLPNYVVVEQRYFDLLSVPANDDH--PS-----HDVSEGQKFVKEVYEALRSSPQWNEILFIITYDEHGGF   89 (249)
Q Consensus        17 ~F~~D~~~G~LP~vSfI~P~~~d~~~~~~nd~H--P~-----~dv~~G~~~l~~v~eAL~~sP~W~~TliIITyDE~GGf   89 (249)
                      +|..+.+...-|-+.++...--.....+.....  ..     ..+..=|..|.+|+++|.++-.|++|+||+|=|=++-+
T Consensus       189 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~il~~Lk~~gl~dnTiIIftSDHG~~~  268 (485)
T d1auka_         189 DLMADAQRQDRPFFLYYASHHTHYPQFSGQSFAERSGRGPFGDSLMELDAAVGTLMTAIGDLGLLEETLVIFTADNGPET  268 (485)
T ss_dssp             HHHHHHHHTTCCEEEEEECCTTSSSCCCCTTTTTTSSSHHHHHHHHHHHHHHHHHHHHHHHTTCGGGEEEEEEESSCCCG
T ss_pred             HHHHhhhccccccccccccccccccccccccccccccccchhhhhHHhhhhcccHHHHHHHcCCccCeEEEEeeCCcccc
Confidence            456666777778777664211110000000000  00     13556788999999999999999999999999987655


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCCCcCceeeEEEccCCCCCeEe
Q 042607           90 YDHVPTPVTGVPSPDDIVGPEPYNFKFDRLGVRVPTIFISPWIQRGTFT  138 (249)
Q Consensus        90 yDHV~PP~~~~p~pDg~~g~~p~~f~f~~lG~RVP~ivISPw~k~G~V~  138 (249)
                      ..|=-   .+..  ....+.   .....-.|.|||+||-.|=..+|.+.
T Consensus       269 ~~~~~---~g~~--~~~~~~---k~~~~e~~~~vP~ii~~P~~~~~~~~  309 (485)
T d1auka_         269 MRMSR---GGCS--GLLRCG---KGTTYEGGVREPALAFWPGHIAPGVT  309 (485)
T ss_dssp             GGGGG---SCCC--TTSCCC---TTSSSHHHHBCCCEEECTTTSCSEEE
T ss_pred             ccccc---cccc--cccccc---cccchhcccccccccccccccccccc
Confidence            44411   0000  000010   01122358999999999987777663



>d1fsua_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hdha_ c.76.1.2 (A:) Arylsulfatase B (4-sulfatase) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1p49a_ c.76.1.2 (A:) Steryl-sulfatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i09a1 c.76.1.5 (A:2-107,A:227-403) Phosphopentomutase DeoB {Streptococcus mutans [TaxId: 1309]} Back     information, alignment and structure