Citrus Sinensis ID: 042701

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070-----

MEEEDALELLQRYRRDRRILLDFILSGSLIKKVIMPPGAITLDDVDLDQVSVDYVLGCAKKGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFLVTNPQSSGSPPRRAPPPITVLTPPPVPVTVPPPAFAPSPIVSAASRSESFNSTQERELTVDDIEDFEDDDDIEEINSHQVSRRRLNDASDLVVKLPSFTTGITDDDLRETAYEVLLACAGAAGGLIVPSKEKRKDKKSRLMKKLGRSKNDNVVNQSQRAPGLVGLLETMRVQMEISEAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGFGESGRRVNELSILLAKIEESESLPSSTGELQRTECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEGGSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLLEEPEMVVDKSEIHEHPLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKIIFWDLREPFIDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELIDDLRSGSSQDMLGTRGKLGADSETLLRILCHRSDSEASHFLKKQYKIPKSSS

ccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccccHHHHHHHHHccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccEEcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccEEEEEEccccHHHHHHHHHHcccccccc

ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccccccccccccHHHccHHHHHHHHHccccEEHHHHHHHHHHccccccEcccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHEHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccEEccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHcccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHEEEcccccccccccccccccccccccHEEEEHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccEEEEEEEccccHHHHHHHHHHcccccccc

MEEEDALELLQRYRRDRRILLDFILSgslikkvimppgaitlddvdldqVSVDYVLGCAKKGGMLELSEAIRDfhdhtdlpqmnnggsadefflvtnpqssgspprrapppitvltpppvpvtvpppafapspivsaasrsesfnstqereltvddiedfeddddieeinshqvsrrrlndasdlvvklpsfttgitdddLRETAYEVLLACAGaagglivpskekrkDKKSRLMKKLgrskndnvvnqsqrapgLVGLLETMRVQMEISEAMDIRTRQGLLNALtgkvgkrmdTLLIPLELLccisrtefsdkntsLVENWMVLNMLEEGlinhpvvgfgesgrRVNELSILLAKIeeseslpsstgelqRTECLRSLREIAIplaerpargdltgevchwadgyhLNVRLYEKLLLSVFDvldegkltEEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLkkiplkeqrgpqerLHLKSLLSKVeveggsqsFSFLRSFLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLleepemvvdkseihehPLALLAEETKKLLKrdssifmpilskrhpqaTIVSASLLHKlygnklkpfsdgaehltedvasvfpaaDSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQerwdpispqqrhasSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHvtdklgskedlvppepvltRYRKEAGIKAFVKKeildprmseerrssEINILTTAALCVQLNTLHYAISQLNKLEDSILErwtrkkphENFLKKLVEEKSksftkndtfdgsrkDINAAIDRICEFtgtkiifwdlrepfidnlykpsvsksRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLlnggpfrvffpsdaKQLEEDLEILKEFFisggdglprgvvENQVARARHVVKLHGYETRELIDdlrsgssqdmlgtrgklgadsETLLRILCHrsdseashflkkqykipksss

MEEEDALELLQRYRRDRRILLDfilsgslikkvIMPPGAITLDDVDLDQVSVDYVLGCAKKGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFLVTNPQSSGSPPRRAPPPITVLTPPPVPVTVPPPAFAPSPIVSAasrsesfnstqereltvddiedfeddDDIEEinshqvsrrrlndasdlvvklpsfttgitdddLRETAYEVLLACagaagglivpskekrkdkKSRLmkklgrskndnvvnqsqrapglvGLLETMRVQMEISEAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGFGESGRRVNELSILLAKieeseslpsstgelqRTECLRSLREIAiplaerpargdlTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEGGSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLLEEPEMVVDKSEIHEHPLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQErwdpispqqrhASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVtdklgskedlvppepvltryrkeagikafvkkeildprmseerrsSEINILTTAALCVQLNTLHYAISQLNKLEDSILErwtrkkphenflkklveeksksftkndtfdgsrkdINAAIDRICEFTGTKIIFWDLREPFIDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDLEILKEFFisggdglprGVVENQVARARHVVKlhgyetreliddlrsgssqdmlgtrgklgadsETLLRILCHrsdseashflkkqykipksss

MEEEDAlellqryrrdrrillDFILSGSLIKKVIMPPGAITlddvdldqvsvdyvlGCAKKGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFLVTNpqssgspprrapppitvltpppvpvtvpppafapspivsaasRSESFNSTQERELTVddiedfeddddieeiNSHQVSRRRLNDASDLVVKLPSFTTGITDDDLRETAYEVllacagaagglIVPskekrkdkksrlmkklGRSKNDNVVNQSQRAPGLVGLLETMRVQMEISEAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGFGESGRRVNELSILLAKIEESESLPSSTGELQRTECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDegklteeveeilellKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEGGSQsfsflrsfllPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLLEEPEMVVDKSEIHEHPlallaeetkkllkRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKIIFWDLREPFIDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELIDDLRSGSSQDMLGTRGKLGADSETLLRILCHRSDSEASHFLKKQYKIPKSSS

********LLQRYRRDRRILLDFILSGSLIKKVIMPPGAITLDDVDLDQVSVDYVLGCAKKGGMLELSEAIRDFH************************************************************************************************************DLVVKLPSFTTGITDDDLRETAYEVLLACAGAAGGLIV**********************************LVGLLETMRVQMEISEAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGFGESGRRVNELSILLAKI****************ECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLK*******************L*KVEVEGGSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLLEEPEMVVDKSEIHEHPLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEIL************INILTTAALCVQLNTLHYAISQLNKLEDSILERWTRK*****FL*********************KDINAAIDRICEFTGTKIIFWDLREPFIDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELID**********************TLLRILCH*********************

******L***QRYRRDRRILLDFILSGSLIKKVIMPPGAITLDDVDLDQVSVDYVLGCAKKGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFL*************************************************************DIEDFEDDDD***************DASDLVVKLPSFTTGITDDDLRETAYEVLLACAG***********************************************TMRVQMEISEAMDIRTRQGLLNALTGKV*KRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVV****************A**********************SLREIAI*LA******DLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKK*************HLKSLLSKVEVEGGSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRL****************HPLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWD*********SSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKED*******************************************TAALCVQLNTLHYAISQLNKLEDSIL****************************TFDGSRKDINAAIDRICEFTGTKIIFWDLREPFIDNLYK**********LIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELID**********************TLLRILCHRSDSEASHFLKKQYKIP****

MEEEDALELLQRYRRDRRILLDFILSGSLIKKVIMPPGAITLDDVDLDQVSVDYVLGCAKKGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFLVTN***********PPPITVLTPPPVPVTVPPPAFAPSPIVSA*************ELTVDDIEDFEDDDDIEEINSHQVSRRRLNDASDLVVKLPSFTTGITDDDLRETAYEVLLACAGAAGGLIVPSK**********MKKLGRSKNDNVVNQSQRAPGLVGLLETMRVQMEISEAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGFGESGRRVNELSILLAKIEE************RTECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEGGSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLLEEPEMVVDKSEIHEHPLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKIIFWDLREPFIDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELIDDLRSGSSQDMLGTRGKLGADSETLLRILCHRSDSEASHFLKK*********

***EDALELLQRYRRDRRILLDFILSGSLIKKVIMPPGAITLDDVDLDQVSVDYVLGCAKKGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFLVTNPQSSGSPPRRAPPPITVL***************************************************************LNDASDLVVKLPSFTTGITDDDLRETAYEVLLACAGAAG*************************************GLVGLLETMRVQMEISEAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGFGESGRRVNELSILLAKIEESESLPSSTGELQRTECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEGGSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLLEEPEMVVDKSEIHEHPLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEI***************ILTTAALCVQLNTLHYAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKIIFWDLREPFIDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELIDDLRSGSS********KLGADSETLLRILCHRSDSEASHFLKKQYKIP****

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1075
359487136		1126	PREDICTED: uncharacterized protein LOC10	1.0	0.954	0.745	0.0
296087847		1079	unnamed protein product [Vitis vinifera]	0.973	0.969	0.741	0.0
255543923		1520	conserved hypothetical protein [Ricinus	0.986	0.698	0.752	0.0
449449256		1107	PREDICTED: uncharacterized protein LOC10	0.994	0.965	0.750	0.0
356548839		1106	PREDICTED: uncharacterized protein LOC10	0.994	0.966	0.741	0.0
357515289		1102	hypothetical protein MTR_8g040190 [Medic	0.992	0.968	0.728	0.0
356556786		1101	PREDICTED: uncharacterized protein LOC10	0.996	0.972	0.739	0.0
356556784		1105	PREDICTED: uncharacterized protein LOC10	0.996	0.969	0.738	0.0
297810809		1101	hypothetical protein ARALYDRAFT_487516 [	0.991	0.968	0.726	0.0
22326641		1101	uncharacterized protein [Arabidopsis tha	0.991	0.968	0.711	0.0

>gi\|359487136\|ref\|XP_002262850.2\| PREDICTED: uncharacterized protein LOC100248009 [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1639 bits (4245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 839/1126 (74%), Positives = 964/1126 (85%), Gaps = 51/1126 (4%)

Query: 1    MEEEDALELLQRYRRDRRILLDFILSGSLIKKVIMPPGAITLDDVDLDQVSVDYVLGCAK 60
            MEEE+A+ELLQRYRRDRR+LLD+ILSGSLIKKV+MPPGA++LDDVDLDQVSVDYVL C+K
Sbjct: 1    MEEENAVELLQRYRRDRRVLLDYILSGSLIKKVLMPPGAVSLDDVDLDQVSVDYVLSCSK 60

Query: 61   KGGMLELSEAIRDFHDHTDLPQMNNGGSADEFFLVTNPQSSGSPPRRAPPPITV------ 114
            KG M+ELSEAIR++HD T+ P MNN GSA+EFFLVTNP+SSGSPP+RAPPPI        
Sbjct: 61   KGAMVELSEAIREYHDSTEFPNMNNTGSANEFFLVTNPESSGSPPKRAPPPIPASAPSSI 120

Query: 115  --LTPPPVPV----------TVPPPAFAPSPIVSAASRSESFNSTQERELTVDDIEDFED 162
              LTP P PV          T P P  A SPI+S+ S+S S NST++REL++DDI+  + 
Sbjct: 121  PILTPSPAPVLASSPISDLETSPIPPLAASPIMSSVSKSVSLNSTRDRELSIDDIDIDDL 180

Query: 163  DDDIEEINSH--QVSRRRLNDASDLVVKLPSFTTGITDDDLRETAYEVLLACAGAAGGLI 220
            ++D +       ++SRR+ NDA+DLV+ LPSF TGIT+DDLRETAYEVLLA AGA+GGLI
Sbjct: 181  EEDDDVDEVDSLRMSRRKPNDAADLVLGLPSFATGITEDDLRETAYEVLLASAGASGGLI 240

Query: 221  VPSKEKRKDKKSRLMKKLGRSKNDNVVNQSQRAPGLVGLLETMRVQMEISEAMDIRTRQG 280
            VPSKEK+KD+KS+LM+KLGRSK+++V  QSQRAPGLVGLLE MRVQME+SEAMDIRTRQG
Sbjct: 241  VPSKEKKKDRKSKLMRKLGRSKSEHVKVQSQRAPGLVGLLEAMRVQMEVSEAMDIRTRQG 300

Query: 281  LLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGF 340
            LLNAL GKVGKRMDTLLIPLELLCCISRTEFSDK   +      LNMLEEGLINHP VGF
Sbjct: 301  LLNALVGKVGKRMDTLLIPLELLCCISRTEFSDKKAYIRWQKRQLNMLEEGLINHPAVGF 360

Query: 341  GESGRRVNELSILLAKIEESESLPSSTGELQRTECLRSLREIAIPLAERPARGDLTGEVC 400
            GESGR+ +EL ILLAKIEESESLP STG LQRTECLRSLREIAIPLAERPARGDLTGEVC
Sbjct: 361  GESGRKASELRILLAKIEESESLPPSTGGLQRTECLRSLREIAIPLAERPARGDLTGEVC 420

Query: 401  HWADGYHLNVRLYEKLLLSVFDVLDEGKLTEEVEEILELLKSTWRVLGITETMHYTCYAL 460
            HWADGYHLNVRLYEKLLLSVFD+LDEGKLTEEVEEILELLKSTWRVLGI ET+HYTCYA 
Sbjct: 421  HWADGYHLNVRLYEKLLLSVFDILDEGKLTEEVEEILELLKSTWRVLGINETIHYTCYAW 480

Query: 461  VLFRQYVITSEQGMLQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEGGSQSFSFLRS 520
            VLFRQ+VITSE GML+HAI+QLKKIPLKEQRGPQERLHLKSL SK+E E G +  +FL S
Sbjct: 481  VLFRQFVITSEHGMLRHAIEQLKKIPLKEQRGPQERLHLKSLQSKIEGENGFRDINFLHS 540

Query: 521  FLLPIQKWADKQLGDYHLHFAECPVMMENVVSVAMLARRLLLEEP------EMVVDKSEI 574
            FL PI+KWADKQLGDYHLHFA+  VMME +V+VAM++RRLLLEEP       +V D+ +I
Sbjct: 541  FLSPIKKWADKQLGDYHLHFAQGSVMMEEIVAVAMISRRLLLEEPVGAIESTLVTDQEQI 600

Query: 575  -------------------------HEHPLALLAEETKKLLKRDSSIFMPILSKRHPQAT 609
                                     HEHPLALLAEETKKLL + ++++MP+LS+R+PQAT
Sbjct: 601  EAYVSSSTKHAFARILQVVETLDTTHEHPLALLAEETKKLLNKATALYMPVLSRRNPQAT 660

Query: 610  IVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAAVYC 669
             V+ASLLH+LYGNKLKPF DGAEHLTEDV SVFPAADSLEQ II++IT++CEE TA  YC
Sbjct: 661  FVAASLLHRLYGNKLKPFLDGAEHLTEDVVSVFPAADSLEQCIIAVITTSCEEGTADAYC 720

Query: 670  RKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVYRIV 729
            RKL  YQIE+ISGTLV+RW+N+QL R+L WVERAIQQERWDPISPQQRHA+SIVEVYRIV
Sbjct: 721  RKLTQYQIETISGTLVMRWVNAQLARVLGWVERAIQQERWDPISPQQRHANSIVEVYRIV 780

Query: 730  EETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKE 789
            EETVDQFFAL+VPMRS EL++LFRGIDNAFQVYA+HV DKL SKEDL+PP P+LTRY+KE
Sbjct: 781  EETVDQFFALKVPMRSAELSSLFRGIDNAFQVYASHVVDKLASKEDLIPPVPILTRYKKE 840

Query: 790  AGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLEDSILERWTR 849
            AGIKAFVKKE++DPR+ +ERRSSEIN+ TT  LCVQLNTL+YAISQLNKLEDSI ERWTR
Sbjct: 841  AGIKAFVKKELMDPRLPDERRSSEINVQTTPTLCVQLNTLYYAISQLNKLEDSIWERWTR 900

Query: 850  KKPHENFLKKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKIIFWDLREPFIDNL 909
            KKP E  +K+  +EKS+S  + DTFDGSRKDINAAIDRICE+TGTK+IFWDLREPFIDNL
Sbjct: 901  KKPQERSIKRSTDEKSRSSMQKDTFDGSRKDINAAIDRICEYTGTKVIFWDLREPFIDNL 960

Query: 910  YKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRV 969
            YKP+V+ SRLE+++EPLD+ L++LCD+IVEPLRDR+VTGLLQA+LDGLLRV+L+GGP RV
Sbjct: 961  YKPNVTHSRLEAIVEPLDMVLNQLCDIIVEPLRDRIVTGLLQAALDGLLRVILDGGPSRV 1020

Query: 970  FFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELIDDLRSG 1029
            FFPSDAK LEEDLE+LKEFFISGGDGLPRGVVENQVAR RH +KLH YETRELI+DL+S 
Sbjct: 1021 FFPSDAKLLEEDLEVLKEFFISGGDGLPRGVVENQVARVRHKIKLHSYETRELIEDLKSA 1080

Query: 1030 SSQDMLGTRGKLGADSETLLRILCHRSDSEASHFLKKQYKIPKSSS 1075
            S  +M G R  LGAD+ TLLRILCHRSDSEASHFLKKQ+KIP+S++
Sbjct: 1081 SGSEMQGGRSNLGADTNTLLRILCHRSDSEASHFLKKQFKIPRSAA 1126

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|296087847\|emb\|CBI35103.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255543923\|ref\|XP_002513024.1\| conserved hypothetical protein [Ricinus communis] gi\|223548035\|gb\|EEF49527.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|449449256\|ref\|XP_004142381.1\| PREDICTED: uncharacterized protein LOC101216236 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356548839\|ref\|XP_003542806.1\| PREDICTED: uncharacterized protein LOC100813299 [Glycine max]	Back alignment and taxonomy information

>gi\|357515289\|ref\|XP_003627933.1\| hypothetical protein MTR_8g040190 [Medicago truncatula] gi\|355521955\|gb\|AET02409.1\| hypothetical protein MTR_8g040190 [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356556786\|ref\|XP_003546703.1\| PREDICTED: uncharacterized protein LOC100780877 isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|356556784\|ref\|XP_003546702.1\| PREDICTED: uncharacterized protein LOC100780877 isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|297810809\|ref\|XP_002873288.1\| hypothetical protein ARALYDRAFT_487516 [Arabidopsis lyrata subsp. lyrata] gi\|297319125\|gb\|EFH49547.1\| hypothetical protein ARALYDRAFT_487516 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|22326641\|ref\|NP_196314.2\| uncharacterized protein [Arabidopsis thaliana] gi\|19699369\|gb\|AAL91294.1\| AT5g06970/MOJ9_14 [Arabidopsis thaliana] gi\|27363442\|gb\|AAO11640.1\| At5g06970/MOJ9_14 [Arabidopsis thaliana] gi\|332003708\|gb\|AED91091.1\| uncharacterized protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1075
TAIR\|locus:2169424		1101	AT5G06970 "AT5G06970" [Arabido	0.489	0.477	0.699	0.0
TAIR\|locus:2139707		1117	AT4G11670 "AT4G11670" [Arabido	0.429	0.413	0.347	8.1e-115
TAIR\|locus:2043515		987	AT2G25800 "AT2G25800" [Arabido	0.434	0.473	0.314	5.7e-97
TAIR\|locus:2061619		952	AT2G20010 "AT2G20010" [Arabido	0.433	0.489	0.325	3.7e-92
TAIR\|locus:2050997		1039	AT2G33420 "AT2G33420" [Arabido	0.438	0.453	0.269	4.8e-82
TAIR\|locus:2018339		1035	AT1G04470 "AT1G04470" [Arabido	0.439	0.456	0.284	2.2e-81
ASPGD\|ASPL0000033995		1343	AN9079 [Emericella nidulans (t	0.149	0.119	0.254	2.1e-05

TAIR\|locus:2169424 AT5G06970 "AT5G06970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1896 (672.5 bits), Expect = 0., Sum P(3) = 0.
 Identities = 370/529 (69%), Positives = 436/529 (82%)

Query:   548 ENVVSVAMLARRLLLEEPEMVVDKSEIH-EHPXXXXXXXXXXXXXRDSSIFMPILSKRHP 606
             E + S  + + +       + +D+S+ + EH              +DS+IFMPILS+RHP
Sbjct:   571 EQIESYVLSSIKNTFTRMSLAIDRSDRNNEHHLALLAEETKKLMKKDSTIFMPILSQRHP 630

Query:   607 QATIVSASLLHKLYGNKLKPFSDGAEHLTEDVASVFPAADSLEQYIISLITSTCEEETAA 666
             QA   SASL+HKLYGNKLKPF DGAEHLTED  SVFPAADSLEQY++ L+TS C E+T+ 
Sbjct:   631 QAIAFSASLIHKLYGNKLKPFLDGAEHLTEDAVSVFPAADSLEQYLLELMTSVCGEDTSG 690

Query:   667 VYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQRHASSIVEVY 726
              Y +KL+PY++ES+SGTLVLRWINSQLGRILSWVERA +QE WDPISPQQR+ SSIVEV+
Sbjct:   691 PYFKKLIPYEVESLSGTLVLRWINSQLGRILSWVERAYKQEHWDPISPQQRYGSSIVEVF 750

Query:   727 RIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRY 786
             RIVEETVDQFFAL+VPMRS EL+ALFRGIDNAFQVY NHV +KL SK+DLVPP PVLTRY
Sbjct:   751 RIVEETVDQFFALKVPMRSIELSALFRGIDNAFQVYTNHVMEKLASKDDLVPPVPVLTRY 810

Query:   787 RKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLEDSILER 846
             +KE  IK FVKKE+ D +  +ERRS  I++  TA LCVQLNTLHYA+SQL+KLEDS+  R
Sbjct:   811 KKETAIKVFVKKELFDSKHLDERRSINIDVPATAMLCVQLNTLHYAVSQLSKLEDSMWLR 870

Query:   847 WTRKKPHENF-LKKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKIIFWDLREPF 905
             W  KKP E   ++K + EKSKSF + ++F+GSRKDINAA+DRICEFTGTKIIF DLREPF
Sbjct:   871 WIAKKPREKIVIRKSMVEKSKSFNQKESFEGSRKDINAALDRICEFTGTKIIFCDLREPF 930

Query:   906 IDNLYKPSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGG 965
             I+NLYKP+VS+SRLE LIE LD EL +LC VI+EPLRDR+VT LLQASLDGLLRVLL+GG
Sbjct:   931 IENLYKPNVSQSRLEGLIEALDTELGQLCSVIMEPLRDRIVTSLLQASLDGLLRVLLDGG 990

Query:   966 PFRVFFPSDAKQLEEDLEILKEFFISGGDGLPRGVVENQVARARHVVKLHGYETRELIDD 1025
               RVF PS++K LEED+E+LKEFFISGGDGLPRGVVENQVAR R VVKLHGYETRELIDD
Sbjct:   991 ASRVFHPSESKLLEEDVEVLKEFFISGGDGLPRGVVENQVARVRLVVKLHGYETRELIDD 1050

Query:  1026 LRSGSSQDML-GTRGKLGADSETLLRILCHRSDSEASHFLKKQYKIPKS 1073
             LRS SS +M  G +GKLGAD++TL+R+LCHR+DSEAS FLKKQYKIP+S
Sbjct:  1051 LRSRSSLEMQQGGKGKLGADTQTLVRVLCHRNDSEASQFLKKQYKIPRS 1099

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

TAIR\|locus:2139707 AT4G11670 "AT4G11670" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2043515 AT2G25800 "AT2G25800" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061619 AT2G20010 "AT2G20010" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2050997 AT2G33420 "AT2G33420" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2018339 AT1G04470 "AT1G04470" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000033995 AN9079 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00030886001	SubName- Full=Chromosome undetermined scaffold_53, whole genome shotgun sequence; (1079 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1075
pfam05664		677	pfam05664, DUF810, Protein of unknown function (DU	0.0

>gnl\|CDD\|218680 pfam05664, DUF810, Protein of unknown function (DUF810)	Back alignment and domain information

 Score =  787 bits (2033), Expect = 0.0
 Identities = 316/684 (46%), Positives = 415/684 (60%), Gaps = 44/684 (6%)

Query: 195 GITDDDLRETAYEVLLACAGAAGGLIVPSKEKRKDK-KSRLMKKLGRSKNDNVVNQSQRA 253
           G++DDDLRETAYE+L+A   ++G LI PSKEK+ +K + +    L RSK+ +  +Q QR+
Sbjct: 1   GLSDDDLRETAYEILVAACRSSGPLIYPSKEKKSEKSRVKKALGLKRSKSGSSSSQPQRS 60

Query: 254 PGLVGLLETMRVQMEISEAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSD 313
              V  LE MR+QM ISE MD R R+GLL A  G+VG+R +++++PLELL  +  +EF D
Sbjct: 61  RRPVTQLEIMRIQMRISEQMDSRIRRGLLRAAVGQVGRREESIVLPLELLQQLKASEFPD 120

Query: 314 KNTSLVENWMV--LNMLEEGLINHPVVGFGESGRRVNELSILLAKIEESESLPSSTGELQ 371
                 E W    L +LEEGLI HP V   +S R    L  ++  I+ES+SLP  T   +
Sbjct: 121 PK--EYEAWQKRQLKLLEEGLILHPCVPLDKSNRSAQRLREIIRAIDESDSLPRPTDTNK 178

Query: 372 RTECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLTE 431
           R+E LRSLR + + LA RP+RG +TG+ CHWADGY LN+RLYEKLL +VFD +D+G L E
Sbjct: 179 RSEILRSLRSVVMSLAWRPSRGGMTGDSCHWADGYPLNIRLYEKLLEAVFDQVDDGSLAE 238

Query: 432 EVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKKIPLKEQR 491
           EV+EILELLK TW +LGITET+H  C A  LFRQYV+T E  +L  AI QL ++ L  +R
Sbjct: 239 EVDEILELLKKTWSILGITETIHNVCLAWALFRQYVVTGEPDLLAAAIAQLAEVALDAKR 298

Query: 492 GPQERLHLKSLLSKVEVEGGSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPV-MMENV 550
           G +E L+LKSL   V     +     L S L  I  W++K+L DYH  F E  + +ME++
Sbjct: 299 GTKEALYLKSLARSVT----TIHSPLLASALSSILGWSEKRLLDYHDTFDEGNIGVMEDI 354

Query: 551 VSVAMLARRLLLEEPE---------------------------------MVVDKSEIHEH 577
           VS+A  A R+L E+                                      D +    H
Sbjct: 355 VSIAYSAARILGEDISAELRRARKTCARDRIDEYIRSSLKNAFAKDAKVADGDATTNPLH 414

Query: 578 PLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTED 637
            LA LAEET  L K++   F PIL + HPQA  V+A+ LHK YGN LK F  G   LTED
Sbjct: 415 VLAQLAEETADLAKKELERFSPILKRWHPQAAGVAAATLHKCYGNDLKQFLAGGTELTED 474

Query: 638 VASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRIL 697
              V  AAD LE+ ++ +    C++   AV  R++ PY++ES+ G LV  WIN ++ R+ 
Sbjct: 475 AVEVLWAADKLEKALVQIAAVDCDDGGKAV-IREMEPYEVESVIGNLVKTWINEKIDRLK 533

Query: 698 SWVERAIQQERWDPISPQQRHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDN 757
            WV+RAI+QE W P S  QR+A S VEV RIVEET+D FF L +P   + L AL  GID 
Sbjct: 534 EWVDRAIEQETWKPKSNDQRYAPSAVEVLRIVEETLDGFFGLPIPAHVSLLRALTEGIDA 593

Query: 758 AFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINIL 817
           AFQ Y + V   LGS+EDLVPP P LTR +K +GI    KK+       +ER+S  I+ L
Sbjct: 594 AFQKYTSKVVSSLGSREDLVPPLPPLTRCKKASGIVDLWKKKFKPSSPPDERKSQNIDEL 653

Query: 818 TTAALCVQLNTLHYAISQLNKLED 841
              ALCV+LNTLHY  SQL+ LE 
Sbjct: 654 GVPALCVRLNTLHYLRSQLSSLEK 677

This family consists of several plant proteins of unknown function. Length = 677

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1075
PF05664		677	DUF810: Protein of unknown function (DUF810); Inte	100.0
KOG1011		1283	consensus Neurotransmitter release regulator, UNC-	100.0
KOG1328		1103	consensus Synaptic vesicle protein BAIAP3, involve	99.86
PF10540		137	Membr_traf_MHD: Munc13 (mammalian uncoordinated) h	99.84
PF06046		566	Sec6: Exocyst complex component Sec6; InterPro: IP	98.72
KOG2180		793	consensus Late Golgi protein sorting complex, subu	97.68
PF06292		106	DUF1041: Domain of Unknown Function (DUF1041); Int	97.46
KOG3543		1218	consensus Ca2+-dependent activator protein [Signal	96.76
PF04091		311	Sec15: Exocyst complex subunit Sec15-like ; InterP	96.07
PF04437		494	RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00	95.91
KOG2286		667	consensus Exocyst complex subunit SEC6 [Intracellu	95.69
COG5173		742	SEC6 Exocyst complex subunit SEC6 [Intracellular t	94.59

>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function	Back alignment and domain information

Probab=100.00  E-value=3.2e-188  Score=1666.43  Aligned_cols=639  Identities=46%  Similarity=0.736  Sum_probs=605.9

Q ss_pred             CCChhHHHHHHHHHHHHHhhccCCccccccchhhhhhhHHHHhhcCCCCC----CCcccCCCCCCcccHHHHHHHhhhhh
Q 042701          195 GITDDDLRETAYEVLLACAGAAGGLIVPSKEKRKDKKSRLMKKLGRSKND----NVVNQSQRAPGLVGLLETMRVQMEIS  270 (1075)
Q Consensus       195 ~ls~ddlRetAYEi~~a~~~~sg~~~~~~~~~~~~~~s~~k~~lg~~~~~----~~~~~~~~~~~~~~~~e~mR~qm~vs  270 (1075)
                      ||||||||||||||||||||+||+.+++..++++++ ||+|++||+|+++    .++|+++|+|  +|++|+||+||+||
T Consensus         1 ~ls~~dlRetAYEi~~a~~~~s~~~~~~~~~~~~~~-s~~k~~lgl~~~~~~~~~~~~~~~~~~--~~~~e~~r~qm~vs   77 (677)
T PF05664_consen    1 GLSDDDLRETAYEILLASCRSSGGLIYFSQSKKKEK-SRVKKALGLKSSKSGSSVSSPGRPRRP--MTSAEIMRVQMRVS   77 (677)
T ss_pred             CCCHHHHHHHHHHHHHHHHhccCCCccCccccccch-hHHHHHhcCCCCCCCCCCCCCCCCCCc--chHHHHHHHHhccc
Confidence            799999999999999999999988888765544433 9999999998776    4467777787  99999999999999


Q ss_pred             hhhhHHHHHHHHHHhhhhhccccccccccHhhhhcCCCCCCCChhhhHHHHHHHHHHHHhhhhcCCccccCCCChhhHHH
Q 042701          271 EAMDIRTRQGLLNALTGKVGKRMDTLLIPLELLCCISRTEFSDKNTSLVENWMVLNMLEEGLINHPVVGFGESGRRVNEL  350 (1075)
Q Consensus       271 e~~d~r~R~~l~~~~~gq~g~r~~~~~lpLeLL~~~~~sdF~d~~ey~~Wq~rql~~LE~gLl~hp~~~~~~~~~~~~~l  350 (1075)
                      ||+|+||||+|||+++||+|||+|+++|||||||++|+|||+|++||++|||||||+||||||+||++|+|++|.+|++|
T Consensus        78 e~~d~r~r~~l~~~~~~~~g~r~e~~~lpLeLl~~~~~sdF~d~~ey~~WqkRql~~Le~gL~~hp~~~l~~s~~~a~~l  157 (677)
T PF05664_consen   78 EQMDARIRRALLRAAAGQVGRRAESIVLPLELLQQLKPSDFSDEKEYEQWQKRQLKVLEAGLLNHPSVPLDKSNASAQRL  157 (677)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccHHHHhhCCHhhCCCHHHHHHHHHHHHHHHHHHHHhCcCCCccccchhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhccCCCCCccccchhHHHHHHHHHHhhhhcCCCCCCCCCCcccccCCCcccHHHHHHHHhhhccccCCccch
Q 042701          351 SILLAKIEESESLPSSTGELQRTECLRSLREIAIPLAERPARGDLTGEVCHWADGYHLNVRLYEKLLLSVFDVLDEGKLT  430 (1075)
Q Consensus       351 r~~~~~~~~~~~~~~~~~~~~~~e~m~~l~~~~~~La~r~~~~~~~~e~chWadgyplNv~LY~~LL~~~FD~~de~~v~  430 (1075)
                      |++|++|++.+.++..++.++|+|+||+||++|++|||||++++.++|+||||||||||+||||+||++|||++|||+|+
T Consensus       158 r~~~~~~~~~~~~~~~~~~~~~se~~~~l~~~~~~La~r~~~~~~~~e~chWadgyplN~~LYe~LL~~~FD~~de~~vi  237 (677)
T PF05664_consen  158 RQIIAKIREDEAEDKPIDTGKNSESMRALRSAVISLAWRPSRDGSSGETCHWADGYPLNVRLYEKLLFSVFDILDEGQVI  237 (677)
T ss_pred             HHHHHhcccccccCCcCccccccHHHHHHHHHHHHHhcCCCCCCCCCcccccccCCCccHHHHHHHHHHHhcccccchHH
Confidence            99999888877755544445559999999999999999988888999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccccccchhHHHHHHHHHhhhhhhccCchhHHHHHHHHhhhccccccCCccchhhhhhhhhhhhhcC
Q 042701          431 EEVEEILELLKSTWRVLGITETMHYTCYALVLFRQYVITSEQGMLQHAIDQLKKIPLKEQRGPQERLHLKSLLSKVEVEG  510 (1075)
Q Consensus       431 eEvdElleliK~TW~~LGI~q~~Hn~cf~WvLF~qyv~Tge~~Ll~~a~~~l~~v~~~~~~~~~~~~y~k~l~~~~~~~~  510 (1075)
                      |||||+||+||+||++||||||+||+|||||||||||+|||++||+||++||++|++|+++.++|++|+|+|+|+.    
T Consensus       238 dE~dEvlellK~tW~~LGIt~~lHn~cf~WVlF~qyv~tge~~LL~~a~~~L~ev~~d~~~~~~~~~y~~sl~~~~----  313 (677)
T PF05664_consen  238 DEVDEVLELLKKTWSILGITQTLHNVCFAWVLFRQYVATGEPDLLKAAIQQLQEVAKDAKRATKDPLYLKSLRCSV----  313 (677)
T ss_pred             hhHHHHHHHHHHHhHHhCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccccccchhhhhhhhccc----
Confidence            9999999999999999999999999999999999999999999999999999999999998899999999999998    


Q ss_pred             CCcchHHHHHHHHhHHHHHHHhhhhhhhhccCCcc-hhhHHHHHHHHHHHHhccCcccc---------------ccc---
Q 042701          511 GSQSFSFLRSFLLPIQKWADKQLGDYHLHFAECPV-MMENVVSVAMLARRLLLEEPEMV---------------VDK---  571 (1075)
Q Consensus       511 ~~~~~~lL~s~L~si~~W~ekrL~dYH~~F~~~~~-~me~l~sl~~~~~kil~ed~~~~---------------yi~---  571 (1075)
                      ++.++++|+|+|++|++|++|||+|||+||++|+. .||++++|++.++||++||+++.               ||+   
T Consensus       314 ~~~~l~ll~s~L~si~~W~ekrL~dYH~~f~~~~~~~me~llsl~~~a~~il~ed~~~~~~~~~~~~~~~~ie~YIrsSi  393 (677)
T PF05664_consen  314 ETSDLSLLSSVLSSIQGWAEKRLLDYHDHFSEGNIGVMEGLLSLAVSAAKILGEDVSREYRRKRSKVARSRIESYIRSSI  393 (677)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHHHhhchhHHHHhhhccchHHHHHHHHHHHH
Confidence            77899999999999999999999999999999998 59999999999999999987521               777   


Q ss_pred             ---------------CCCCchHHHHHHHHHHHHHHhhcccCcccccccCCchhHHHHHHHHHHHHhhHHHHHHhhhccCh
Q 042701          572 ---------------SEIHEHPLALLAEETKKLLKRDSSIFMPILSKRHPQATIVSASLLHKLYGNKLKPFSDGAEHLTE  636 (1075)
Q Consensus       572 ---------------~~~~~~~L~~LA~di~~La~~Ek~~fSPiL~~whp~a~~VAA~tLh~~yg~dLK~~L~~v~~lt~  636 (1075)
                                     +.++.|+|++||+||++||++|+++|||+|++|||+|++|||++||+|||++||+||+++++||+
T Consensus       394 ~~Af~~~~~~~~~~~~~~~~~~L~~LA~ei~~la~~e~~~FsPiLk~whP~a~~VAa~~LH~~Yg~~Lk~~L~~~~~LT~  473 (677)
T PF05664_consen  394 KAAFARMASSVDSRSDSEPSHVLAQLAKEIKELAKKEKEVFSPILKRWHPNAAGVAAATLHSCYGNELKQFLSGVTHLTP  473 (677)
T ss_pred             HHHHHhhhhhhhhcccccchHHHHHHHHHHHHHHHHhHHhcCchhcccCchHHHHHHHHHHHHHHHHHHHHHcccccCCH
Confidence                           24888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhccCchhHHHHHHHHHhhhhcccchhhhhhccCCCccchhhHHHHHHHHHHHhhhhHHHHHHHHHhcCccccCCCCC
Q 042701          637 DVASVFPAADSLEQYIISLITSTCEEETAAVYCRKLMPYQIESISGTLVLRWINSQLGRILSWVERAIQQERWDPISPQQ  716 (1075)
Q Consensus       637 d~~~vl~aAD~LEk~L~ql~~sv~~~dg~k~~vr~~~PfelE~~f~~~V~~Wi~e~~~k~~ewV~rAie~E~WeP~S~~e  716 (1075)
                      ++++||++||+|||+|+||. ++++|||||+++++|+||++|+++.+||++||+++.+++.+||+||+++|+|+|.++++
T Consensus       474 d~v~VL~aA~~LEk~Lvq~~-~~~~edggk~~~rem~Py~vE~~i~~lv~~Wi~~~~~~l~ewv~ra~~qE~W~P~S~~e  552 (677)
T PF05664_consen  474 DVVEVLQAADKLEKALVQMV-SVDCEDGGKSLIREMPPYEVESLISNLVKRWIQEQLERLNEWVDRAIKQEKWNPRSKEE  552 (677)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HhhccccccccccCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCCCCC
Confidence            99999999999999999998 77889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhhhhhhhH
Q 042701          717 RHASSIVEVYRIVEETVDQFFALQVPMRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFV  796 (1075)
Q Consensus       717 ~hSsSVVDIFrii~Etld~ff~L~wp~~~~lat~L~kgI~~~lq~Y~~~V~~~~g~ke~~iP~~P~LTR~~kes~~~~~~  796 (1075)
                      +||+|||||||||+||+|+||+|+||++..++++|++||+++|++||++|+++||++++|+|++|+||||+++++|+++|
T Consensus       553 ~hs~SvVEvfri~~eTvd~ff~L~~~~~~~~l~~L~~gld~~lq~Y~~~v~~~~gsk~~liP~~P~LTR~~~~sk~~~~~  632 (677)
T PF05664_consen  553 RHSPSVVEVFRIFNETVDQFFQLPWPMHADFLQALSKGLDKALQRYCEKVEQSCGSKQSLIPPLPPLTRCKKDSKFKKLW  632 (677)
T ss_pred             CCcchHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCchhhhhhhhhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhccCCCcchhhccccccccccccchhhhccHHHHHHHHHHHHH
Q 042701          797 KKEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLED  841 (1075)
Q Consensus       797 KKa~~e~~~p~e~~~~~~~~~f~p~lCVrLNNLeyi~~qLd~LEk  841 (1075)
                      ||+..++..+.++...+.+++|+|++|||||||||+++||++|||
T Consensus       633 Kk~~~~~~~~~~~~~~~~~~~~~~~lcVrLNtL~yil~qL~~LEK  677 (677)
T PF05664_consen  633 KKKWKSSTNPDERFSSKINSQFTPRLCVRLNTLEYILSQLDKLEK  677 (677)
T ss_pred             HHHhcCccccccccccCcccCccCceeeeecHHHHHHHHHHhhcC
Confidence            999877776776666666789999999999999999999999986

>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]	Back alignment and domain information

>PF10540 Membr_traf_MHD: Munc13 (mammalian uncoordinated) homology domain; InterPro: IPR019558 Mammalian uncoordinated homology 13 (Munc13) proteins constitute a family of three highly homologous molecules (Munc13-1, Munc13-2 and Munc13-3) with homology to Caenorhabditis elegans unc-13p	Back alignment and domain information

>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex	Back alignment and domain information

>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06292 DUF1041: Domain of Unknown Function (DUF1041); InterPro: IPR010439 This entry represents Calcium-dependent secretion activators that are involved in the exocytosis of vesicles filled with neurotransmitters and neuropeptides	Back alignment and domain information

>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]	Back alignment and domain information

>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane	Back alignment and domain information

>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases	Back alignment and domain information

>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1075
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	3e-32
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-14
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-13

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus} Length = 341	Back alignment and structure

 Score =  128 bits (321), Expect = 3e-32
 Identities = 48/349 (13%), Positives = 118/349 (33%), Gaps = 37/349 (10%)

Query: 684  LVLRWINSQLGRILSWVERAIQQERW---DPISPQQRHASSIVEVYRIVEETVDQFFALQ 740
             V++W++        ++  A+++++       S     + S+V+V+  + ++ +    L+
Sbjct: 14   FVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLE 73

Query: 741  VP---MRSTELNALFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVK 797
             P   +    +    + I N    YA+ V+    S       +           ++  ++
Sbjct: 74   CPDPQIVGHYMRRFAKTISNVLLQYADIVSKDFASYCSKEKEKVPCILMNNTQQLRVQLE 133

Query: 798  KEILDPRMSEERRSSEINILTTAALCVQLNTLHYAISQLNKLEDSILERWTRKKPHENFL 857
            K      M E     E++   +  L      L+  + +L+ +  +  +    +       
Sbjct: 134  K------MFEAMGGKELDAEASGTLKELQVKLNNVLDELSHVFATSFQPHIEECV-RQMG 186

Query: 858  KKLVEEKSKSFTKNDTFDGSRKDINAAIDRICEFTGTKIIFWDLREPFIDNLYKPSVSKS 917
              L + K              +D +  +  I +   + +        F     K      
Sbjct: 187  DILSQVKGTGNVPASACSSVAQDADNVLQPIMDLLDSNL------TLFAKICEK------ 234

Query: 918  RLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVLLNGGPFRVFFPSDAKQ 977
                    L   L +L  +++  +   +V     +     L+  +     +   P     
Sbjct: 235  ------TVLKRVLKELWKLVMNTMERTIVLPPEFSK----LKDHMVREEAKSLTPKQCAV 284

Query: 978  LEEDLEILKEFFISGGDGLPRGVVEN--QVARARHVVKLHGYETRELID 1024
            +E  L+ +K++F +GG GL +  +E    +   R+ + L+   T  LI 
Sbjct: 285  VELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIK 333

PyMOL of 3swh

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		1075
3swh_A		341	MUNC13-1, protein UNC-13 homolog A; alpha helical,	100.0
2fji_1		399	Exocyst complex component SEC6; exocytosis, tandem	98.76
2a2f_X		325	Exocyst complex component SEC15; all helical struc	95.42
3hr0_A		263	COG4; conserved oligomeric golgi complex, intracel	94.6
3fhn_A		706	Protein transport protein TIP20; TIP20P, vesicle t	81.13

>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}	Back alignment and structure

Probab=100.00  E-value=1.4e-46  Score=421.44  Aligned_cols=304  Identities=16%  Similarity=0.272  Sum_probs=223.3

Q ss_pred             chhhHHHHHHHHHHHhhhhHHHHHHHHHhcCccccCC---CCCCCCCcHHHHHHHHHHHHHHHHcCCCCCchHHH---HH
Q 042701          677 IESISGTLVLRWINSQLGRILSWVERAIQQERWDPIS---PQQRHASSIVEVYRIVEETVDQFFALQVPMRSTEL---NA  750 (1075)
Q Consensus       677 lE~~f~~~V~~Wi~e~~~k~~ewV~rAie~E~WeP~S---~~e~hSsSVVDIFrii~Etld~ff~L~wp~~~~la---t~  750 (1075)
                      ++.||.|||++|+++..+++.+||++|++.|+|+|.+   ++.+||+||||+|++|+|+++++.+|+|||+++.+   +.
T Consensus         7 ~~~wF~~~V~~Wl~~~~~k~~~~v~~Ai~~Dk~~~~~~~~~~~~hSsSvvDif~~~~Q~~~~~~~L~WpD~~~~~~f~t~   86 (341)
T 3swh_A            7 YPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPDPQIVGHYMRR   86 (341)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSSSCCSCTHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccCccccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence            5889999999999999999999999999999999975   78899999999999999999999999999999876   99


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhhhhhhhHhhhccCCCcchhhccccccccccccchhhhccHH
Q 042701          751 LFRGIDNAFQVYANHVTDKLGSKEDLVPPEPVLTRYRKEAGIKAFVKKEILDPRMSEERRSSEINILTTAALCVQLNTLH  830 (1075)
Q Consensus       751 L~kgI~~~lq~Y~~~V~~~~g~ke~~iP~~P~LTR~~kes~~~~~~KKa~~e~~~p~e~~~~~~~~~f~p~lCVrLNNLe  830 (1075)
                      |++.|++++..||+.+.++. .           +.|.++                            +...+||.||||+
T Consensus        87 l~~~i~~~~~~Y~~~l~~~~-~-----------~~~~~e----------------------------~~~~~Cv~lNNie  126 (341)
T 3swh_A           87 FAKTISNVLLQYADIVSKDF-A-----------SYCSKE----------------------------KEKVPCILMNNTQ  126 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-H-----------HHCCTT----------------------------SCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH-H-----------hhhhhh----------------------------cccchhhhcccHH
Confidence            99999999999999997632 1           001110                            1224999999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCchhhhhhHHhhhhc--CCCcccchhhh-HHHHHHHHHHHHHHhccceeeeccchhhhh
Q 042701          831 YAISQLNKLEDSILERWTRKKPHENFLKKLVEEKSK--SFTKNDTFDGS-RKDINAAIDRICEFTGTKIIFWDLREPFID  907 (1075)
Q Consensus       831 yi~~qLd~LEk~I~~~~~~~~ss~~~Lsps~~~~~~--~~~ls~~F~~s-r~ai~~aI~ql~e~ia~rvVF~Dlr~~~~d  907 (1075)
                      |+|.+|++|.+.|...-.....+  .+-..++.+.+  .+++...|... +..|..+++||+..+..      +++.  .
T Consensus       127 ~lR~~L~~l~~~l~~~~l~~~~~--~~~~~lq~~l~~vl~~l~~~~~~~~~~~i~~~v~~m~~~l~~------i~~~--~  196 (341)
T 3swh_A          127 QLRVQLEKMFEAMGGKELDAEAS--GTLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQ------VKGT--G  196 (341)
T ss_dssp             HHHHHHHHHHHHTTTTTSCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------CC-----
T ss_pred             HHHHHHHHHHHhcchhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccc--c
Confidence            99999999999985533222211  11122222211  22455666555 67788888998876632      2211  0


Q ss_pred             hcc---C---CccchhhHHHhhHhHHhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh------------cCCCCCCc
Q 042701          908 NLY---K---PSVSKSRLESLIEPLDVELSKLCDVIVEPLRDRVVTGLLQASLDGLLRVL------------LNGGPFRV  969 (1075)
Q Consensus       908 ~LY---~---g~Va~sRI~PlL~~Ld~~L~~l~s~l~d~vr~rVvkeL~KAs~e~~l~VL------------LaGGpsR~  969 (1075)
                      ++-   .   ....+++|+|||+|||++|.+++++|++++++||+++||++++++|+.++            ++||+.|.
T Consensus       197 ~~~~~~~~~~~~~~~~ai~PLm~yLd~~L~~l~~~L~~~~f~rvL~~lW~~~l~~l~~~i~lP~~~~~~~~~~~~~~~r~  276 (341)
T 3swh_A          197 NVPASACSSVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVREEAKS  276 (341)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSSCC--------
T ss_pred             cCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhhHhhhcccccCC
Confidence            000   0   12247899999999999999999999999999999999999999999987            68999999


Q ss_pred             cChhhHHHHHHHHHHHHHhhhcCCCCCcHHHHHH--HHHHHHHHHhhcccchHHHHHHHHhcc
Q 042701          970 FFPSDAKQLEEDLEILKEFFISGGDGLPRGVVEN--QVARARHVVKLHGYETRELIDDLRSGS 1030 (1075)
Q Consensus       970 Fs~~D~~ilEeDL~~LKdfF~A~GeGLp~e~Vek--~~~~l~~VL~Ly~q~Td~LIe~f~~~~ 1030 (1075)
                      |++++|++++++|+.|++||||||+|||.+++|+  ++++++++|+||+++|++||++|....
T Consensus       277 ~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~~~~  339 (341)
T 3swh_A          277 LTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFVQTQ  339 (341)
T ss_dssp             --CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHTCHHHHHHHHHHHHC---------------
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCCCCCHHHHccChhHHHHHHHHHHhcCCHHHHHHHHHhcc
Confidence            9999999999999999999999999999999997  499999999999999999999997653

PyMOL of 3swh

>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}	Back alignment and structure

>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}	Back alignment and structure

>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}	Back alignment and structure

>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00