Citrus Sinensis ID: 042702

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
Protein Sequence
YDLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQASALLYFFPGFLEVLPLNRIE
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHcccHHHHHHcccccccHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcHccHHHHHHHccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccEEccccccc
Coil and Loop (DISEMBL)
YDLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNrqadigpdcchtidIITRNCWLAMLTSlgftaeegnilrgycdassapslgGLAVIYQASALLyffpgflevlplnrie
Flexible Loop (DISEMBL)
ydlatrlevrgdltECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQASALLYFFPGFLEVLPLNRIE
Low Complexity Region (SEG)
YDLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQASALLYFFPGFLEVLPLNRIE
Disordered region (IsUnstruct)
******LEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQASALLYFFPGFLEVLPL****
Disordered Region (DISOPRED)
**********GD*TECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGY***************YQASALLYFFPGFLEVLPLNR**
Disordered Region (DISEMBL)
YDLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQASALLYFFPGFLEVLPLNRIE
Disordered Region (DISPRO)
YDLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQASALLYFFPGFLEVLPLNR**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
YDLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQASALLYFFPGFLEVLPLNRIE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	115	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.721	0.653	0.588	2e-24
Q9SJ24	125	Egg cell-secreted protein	no	no	0.678	0.624	0.569	6e-22
Q9SJ23	125	Egg cell-secreted protein	no	no	0.721	0.664	0.540	2e-21
Q9SRD8	158	Egg cell-secreted protein	no	no	0.739	0.537	0.470	1e-18
Q9FGG1	155	Egg cell-secreted protein	no	no	0.669	0.496	0.435	1e-14

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 7/90 (7%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL+  G L ECWN L +LKSC+NEIV+FFLN +  +G  CC ++DIIT NCW AML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 62  TSLGFTAEEGNILRGYC------DASSAPS 85
           TSLGFT EE N+LRG+C      D+S APS
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 61/79 (77%), Gaps = 1/79 (1%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL   G L ECWN L +LKSC+NEIV+FFLN +  +G DCC  +++IT +CW AML
Sbjct: 33  NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91

Query: 62  TSLGFTAEEGNILRGYCDA 80
           TSLGFT++E N+LRG+C +
Sbjct: 92  TSLGFTSDETNVLRGFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 4/87 (4%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL   G L +CW+ L +LKSC+NEIV+FFLN +  +G  CC+ +D+IT +CW AML
Sbjct: 33  NIAARL-TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91

Query: 62  TSLGFTAEEGNILRGYCDASSAPSLGG 88
           TSLGFT EE N+LRG+C    +P+ GG
Sbjct: 92  TSLGFTLEETNVLRGFCQ---SPNSGG 115

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 57/85 (67%)

Query: 3   LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLT 62
           L  RL++  D   CW+ LM+L+ CS E+++FFLN +  IGP CC  I  I R CW  M+ 
Sbjct: 44  LVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIG 103

Query: 63  SLGFTAEEGNILRGYCDASSAPSLG 87
            LGFTA+EG++L+GYCD + + + G
Sbjct: 104 VLGFTAQEGDMLQGYCDGNDSDNNG 128

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 8/85 (9%)

Query: 3   LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNR--------QADIGPDCCHTIDIITR 54
           +AT     G+L +CWN  ++LKSC++EIV FFL++        +  I  DCC  I ++ +
Sbjct: 40  MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99

Query: 55  NCWLAMLTSLGFTAEEGNILRGYCD 79
           +CW  M TSLG T  EGN LR YC+
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCE 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
296082551	135	unnamed protein product [Vitis vinifera]	0.686	0.585	0.784	1e-30
359482498	128	PREDICTED: uncharacterized protein LOC10	0.808	0.726	0.645	2e-30
224060465	146	predicted protein [Populus trichocarpa]	0.730	0.575	0.682	1e-27
255578404	136	conserved hypothetical protein [Ricinus	0.730	0.617	0.616	3e-24
116830619	128	unknown [Arabidopsis thaliana]	0.721	0.648	0.588	7e-23
15235039	127	uncharacterized protein [Arabidopsis tha	0.721	0.653	0.588	7e-23
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.669	0.606	0.628	4e-22
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.721	0.664	0.540	1e-20
255578398	135	conserved hypothetical protein [Ricinus	0.660	0.562	0.628	2e-20
116830473	126	unknown [Arabidopsis thaliana]	0.678	0.619	0.569	3e-20

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 67/79 (84%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           DL  RLE  G L ECWN L++LKSC+NEI++FFLN QADIGPDCC  IDIITRNCW  ML
Sbjct: 36  DLVARLETSGGLVECWNALVELKSCTNEIILFFLNGQADIGPDCCGAIDIITRNCWPTML 95

Query: 62  TSLGFTAEEGNILRGYCDA 80
           TSLGFTAEEGNILRGYCDA
Sbjct: 96  TSLGFTAEEGNILRGYCDA 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 71/93 (76%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           DL TRLE  G L ECWN LM+++ C+NEI++FFLN Q  +GP+CC  I IITRNCW AML
Sbjct: 32  DLTTRLETSGGLVECWNALMEIRQCTNEIILFFLNGQTVLGPECCQAISIITRNCWPAML 91

Query: 62  TSLGFTAEEGNILRGYCDASSAPSLGGLAVIYQ 94
           TSLGFTAEEGNIL+GYC+ASS P       +YQ
Sbjct: 92  TSLGFTAEEGNILQGYCNASSGPPTPASPPLYQ 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 68/85 (80%), Gaps = 1/85 (1%)

Query: 3   LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLT 62
           L+ RLE  G L ECWN L+++KSC+NEIV+FF+  QADIGPDCC  I  IT NCW AM T
Sbjct: 38  LSARLEDEGSLVECWNALVEIKSCTNEIVLFFMTGQADIGPDCCRAIHTITHNCWPAMFT 97

Query: 63  SLGFTAEEGNILRGYCDAS-SAPSL 86
           SLGFT EEGNILRGYCDAS ++PS+
Sbjct: 98  SLGFTDEEGNILRGYCDASPNSPSI 122

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 2/86 (2%)

Query: 2   DLATRLE--VRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLA 59
            L  R+E      L +CWN L+++KSCSNEI++FFLN   DIG DCC +I I T NCW A
Sbjct: 32  SLEARIEGSSSSSLVDCWNALIEIKSCSNEIILFFLNGHTDIGADCCRSIAIFTHNCWPA 91

Query: 60  MLTSLGFTAEEGNILRGYCDASSAPS 85
           MLTS+GFTAEEGNILRGYCD +S+ S
Sbjct: 92  MLTSIGFTAEEGNILRGYCDNASSSS 117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 7/90 (7%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL+  G L ECWN L +LKSC+NEIV+FFLN +  +G  CC ++DIIT NCW AML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 62  TSLGFTAEEGNILRGYC------DASSAPS 85
           TSLGFT EE N+LRG+C      D+S APS
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 53/90 (58%), Positives = 66/90 (73%), Gaps = 7/90 (7%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL+  G L ECWN L +LKSC+NEIV+FFLN +  +G  CC ++DIIT NCW AML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 62  TSLGFTAEEGNILRGYC------DASSAPS 85
           TSLGFT EE N+LRG+C      D+S APS
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score =  108 bits (270), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 1/78 (1%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL+  G L ECWNVL +LKSC+NEIV+FFLN +  +G  CC  +DIIT NCW AML
Sbjct: 35  NIAARLQ-SGGLMECWNVLYELKSCTNEIVLFFLNGETKLGVSCCEAVDIITTNCWPAML 93

Query: 62  TSLGFTAEEGNILRGYCD 79
           TSLGFT EE N+LRG+C 
Sbjct: 94  TSLGFTPEEANVLRGFCQ 111

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 4/87 (4%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL   G L +CW+ L +LKSC+NEIV+FFLN +  +G  CC+ +D+IT +CW AML
Sbjct: 33  NIAARL-TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGSGCCNAVDVITTDCWPAML 91

Query: 62  TSLGFTAEEGNILRGYCDASSAPSLGG 88
           TSLGFT+EE N+LRG+C    +P+ GG
Sbjct: 92  TSLGFTSEETNVLRGFCQ---SPTSGG 115

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578398|ref|XP_002530064.1| conserved hypothetical protein [Ricinus communis] gi|223530417|gb|EEF32304.1| conserved hypothetical protein [Ricinus communis]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 55/78 (70%), Gaps = 2/78 (2%)

Query: 3   LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADI--GPDCCHTIDIITRNCWLAM 60
           L T     G L +CWN LM++KSCSNEI++FFLN Q DI  G DCC  I II  NCW +M
Sbjct: 41  LETSSSSGGGLVDCWNALMEIKSCSNEIILFFLNGQTDITIGADCCSAISIIAHNCWPSM 100

Query: 61  LTSLGFTAEEGNILRGYC 78
           LTSLGFT EE NIL GYC
Sbjct: 101 LTSLGFTVEEVNILNGYC 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830473|gb|ABK28194.1| unknown [Arabidopsis thaliana]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 61/79 (77%), Gaps = 1/79 (1%)

Query: 2   DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
           ++A RL   G L ECWN L +LKSC+NEIV+FFLN +  +G DCC  +++IT +CW AML
Sbjct: 33  NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91

Query: 62  TSLGFTAEEGNILRGYCDA 80
           TSLGFT++E N+LRG+C +
Sbjct: 92  TSLGFTSDETNVLRGFCQS 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	115
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.721	0.653	0.588	2e-24
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.721	0.664	0.551	2.9e-23
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.721	0.664	0.540	3.4e-22
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.739	0.537	0.470	8.3e-19
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.721	0.535	0.417	8.8e-15
TAIR|locus:504955577	119	AT3G48675 "AT3G48675" [Arabido	0.617	0.596	0.315	6.3e-05
TAIR|locus:4010713622	120	AT2G14378 [Arabidopsis thalian	0.4	0.383	0.319	0.00021

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 53/90 (58%), Positives = 66/90 (73%)

Query:     2 DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
             ++A RL+  G L ECWN L +LKSC+NEIV+FFLN +  +G  CC ++DIIT NCW AML
Sbjct:    35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query:    62 TSLGFTAEEGNILRGYC------DASSAPS 85
             TSLGFT EE N+LRG+C      D+S APS
Sbjct:    94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 48/87 (55%), Positives = 65/87 (74%)

Query:     2 DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
             ++A RL   G L ECWN L +LKSC+NEIV+FFLN +  +G DCC  +++IT +CW AML
Sbjct:    33 NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91

Query:    62 TSLGFTAEEGNILRGYCDASSAPSLGG 88
             TSLGFT++E N+LRG+C +   P+ GG
Sbjct:    92 TSLGFTSDETNVLRGFCQS---PNSGG 115

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 47/87 (54%), Positives = 64/87 (73%)

Query:     2 DLATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAML 61
             ++A RL   G L +CW+ L +LKSC+NEIV+FFLN +  +G  CC+ +D+IT +CW AML
Sbjct:    33 NIAARL-TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91

Query:    62 TSLGFTAEEGNILRGYCDASSAPSLGG 88
             TSLGFT EE N+LRG+C +   P+ GG
Sbjct:    92 TSLGFTLEETNVLRGFCQS---PNSGG 115

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 40/85 (47%), Positives = 57/85 (67%)

Query:     3 LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLT 62
             L  RL++  D   CW+ LM+L+ CS E+++FFLN +  IGP CC  I  I R CW  M+ 
Sbjct:    44 LVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIG 103

Query:    63 SLGFTAEEGNILRGYCDASSAPSLG 87
              LGFTA+EG++L+GYCD + + + G
Sbjct:   104 VLGFTAQEGDMLQGYCDGNDSDNNG 128

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 38/91 (41%), Positives = 54/91 (59%)

Query:     3 LATRLEVRGDLTECWNVLMKLKSCSNEIVIFFLNR--------QADIGPDCCHTIDIITR 54
             +AT     G+L +CWN  ++LKSC++EIV FFL++        +  I  DCC  I ++ +
Sbjct:    40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99

Query:    55 NCWLAMLTSLGFTAEEGNILRGYCDASSAPS 85
             +CW  M TSLG T  EGN LR YC+  +  S
Sbjct:   100 DCWSVMFTSLGLTTMEGNNLREYCEFQAEKS 130

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:504955577 AT3G48675 "AT3G48675" [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 24/76 (31%), Positives = 34/76 (44%)

Query:    12 DLTECWNVLMKLKSCSNEIV-IFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAEE 70
             D+ +CW+ L  ++ C  EI    F  + A I   CC T   I  NCW  M     F    
Sbjct:    43 DIIKCWSSLFNVQGCVQEIYKSIFSGQFASIEAPCCKTFSAIDTNCWPHMFPLNPFFPP- 101

Query:    71 GNILRGYCDA-SSAPS 85
               IL+  C+  ++ PS
Sbjct:   102 --ILKNNCERIATTPS 115

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4010713622 AT2G14378 [Arabidopsis thaliana (taxid:3702)]

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query:    12 DLTECWNVLMKLKSCSNEIV-IFFLNRQADIGPDCCHTIDIITRNCW 57
             D+ +CW+ L   + C  E++   F  R  D+G  CC     +  NCW
Sbjct:    46 DVEKCWSSLFNTQGCVFELLKSVFSGRFGDVGVACCKAFSTVDANCW 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.142   0.452    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      115       115   0.00091  102 3  11 22  0.41    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  127 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.04u 0.12s 10.16t   Elapsed:  00:00:00
  Total cpu time:  10.04u 0.12s 10.16t   Elapsed:  00:00:00
  Start:  Fri May 10 20:13:52 2013   End:  Fri May 10 20:13:52 2013

GO:0005576 "extracellular region" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9T039	EC14_ARATH	No assigned EC number	0.5888	0.7217	0.6535	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019340001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (135 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	115
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	1e-14

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 62.9 bits (153), Expect = 1e-14
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 15 ECWN-VLMKLKSCSNEIVIFFLNRQADIGPDCCHTIDIITRNCWLAMLTSLGFTAE-EGN 72
          +CW+   +K+  C +EI       + ++GPDCC  I  I  +CW A+             
Sbjct: 1  KCWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAILKIGDDCWPALFKMFPSLPFFPPK 60

Query: 73 ILRGYCD 79
          +L+ YC 
Sbjct: 61 LLKNYCS 67

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	115
PLN00213	118	predicted protein; Provisional	99.96
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.83

>PLN00213 predicted protein; Provisional

Probab=99.96  E-value=4e-30  Score=188.71  Aligned_cols=73  Identities=22%  Similarity=0.497  Sum_probs=68.0

Q ss_pred             CCcchhHHhcccCcchHHHHHHHHHhCccc-cCcccchHHHHhhhcchhhhhccCCCCcchhhHhhhccccCCCCCchh
Q 042702           11 GDLTECWNVLMKLKSCSNEIVIFFLNRQAD-IGPDCCHTIDIITRNCWLAMLTSLGFTAEEGNILRGYCDASSAPSLGG   88 (115)
Q Consensus        11 ~~~~kCWsSL~~v~gC~~EI~~~flnG~~~-IGp~CCkAI~~I~~~CWP~mfps~pf~p~e~~~LKg~C~~~~~psP~~   88 (115)
                      .|+.||||||++++||+.||++++++||++ ||++|||||++++ +|||+| |++||||+   +||++|++++..+|++
T Consensus        43 pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~~~d-nCwP~~-P~~P~fPp---~LK~~Cs~i~~~~~~~  116 (118)
T PLN00213         43 PDITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFLDAD-NCIPKI-PFIPFFPP---MLKEQCSRVAGATPPI  116 (118)
T ss_pred             ccHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHHhhh-ccccCC-cCCCccch---HHHHHHhcccCCCCCC
Confidence            489999999999999999999999999996 9999999999966 999996 99999999   9999999998766654

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.83  E-value=3.8e-21  Score=125.05  Aligned_cols=64  Identities=30%  Similarity=0.677  Sum_probs=56.6

Q ss_pred             hhHHhcccCcchHHHHHHHHHhCc-cccCcccchHHHHhhhcchhh---hhccCCCCcc--hhhHhhhccc
Q 042702           15 ECWNVLMKLKSCSNEIVIFFLNRQ-ADIGPDCCHTIDIITRNCWLA---MLTSLGFTAE--EGNILRGYCD   79 (115)
Q Consensus        15 kCWsSL~~v~gC~~EI~~~flnG~-~~IGp~CCkAI~~I~~~CWP~---mfps~pf~p~--e~~~LKg~C~   79 (115)
                      |||++++++++|+.||+.+|++|+ ..||++||++|+.++++|||.   ||++.|++++  + +.||++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~~~r-~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKPLLR-DLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccchhH-HHHHhhcC
Confidence            699999999999999999999998 569999999999999999999   5556666555  4 49999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00