Citrus Sinensis ID: 042782

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------
MYQTKTKTKVKTKTIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGSRGRRLGSSTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQE
cccccccEEEEEccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccEEccccccHHHHHHHccccccccccEEEEcccHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEEEccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHccccccccccccEEEEEEEEccccccccccccccccccEEEEEEEEccccEEEccccccccHHHHHHcccccEEEEEEEEEEEEEcccEEEEEEEEEcccccHHHHHHHHHHHccccccccccEEEEEEEccccccccccccccccccccccccccccccEEEEEEEEEccccccccccHHHHHHHHHHccccccccEEcccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccccccccccEEEEEccccccccccccccccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHcccccEEccccccccc
ccccccccEEccEHHEHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccccccEEEccHHHHHHHHHHccccccccccEEEccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEEEccccccccccccccccccccccccccEEEccHHHHHHHHHHHHHHcccccccccccEEEEEccEEccccccccccccccccccEEEEEEEEccccEEEEcccccHHHHHHHHccccccEEEEEEEEEcccccHHEEEEEEEEccHHHHHHHHHHHHccccccccccccEEEEEEEEEcccccccccccccccccccHHHHcccccEEEEEEEEEEccccccccccHHHHHHHHccccccccEEEccccHHHHHHHHHHHHHHHHHccccccccccHEEEccHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccEcccHHHEEHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccEEEcccccccc
myqtktktkvkTKTIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVgltmdptellrlgvygqlsvdpfdvqtasldfgmlsraepwavlhpasaddITRVVKAAYeseahgftisarghghsingqaqtsNGVVIQmsgsrgrrlgsstpaalrphvyekeryvdvwGGELWIDVLRSTLehglapkswtdYLYLSVGgtlsnagisgqafhqgpqitnvheldvvtgkgelltcseeqnSGLFHAVLGGLGQFGIITRArislepapkRVRWIRVLYSdfstftrdQEYLISlhelpasqkfdyveGFVIVDEGlinnwrssffsprnpvkitslgtdggvLYCLEITknydestadtTDQEVESLLKKLNFIQssvfttdllyVDFLDRVHKAELKLRskglwevphpwlnlfipksriadfdkgVFKGIlgnktggpiliypmnkhkwdnrssvvtpdedVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKakqylphyttqe
myqtktktkvktktifcVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGsrgrrlgsstpaalrphvyeKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRArislepapkrvRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKlrskglwevphpWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQE
MYQtktktkvktktIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMsgsrgrrlgssTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQE
*********VKTKTIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISA************************************LRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTA****QEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPH*****
**********KTKTIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGSRGRRLGSSTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAK***P******
**********KTKTIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMS***********PAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQE
****KTKTKVKTKTIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGSRGRR******AALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHY****
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYQTKTKTKVKTKTIFCVLCWCCLNYLAIKLAEKELLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGSRGRRLGSSTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query527 2.2.26 [Sep-21-2011]
Q67YU0540 Cytokinin dehydrogenase 5 yes no 0.903 0.881 0.724 0.0
Q5ZAY9534 Cytokinin dehydrogenase 5 yes no 0.901 0.889 0.674 1e-180
Q75K78521 Cytokinin dehydrogenase 9 no no 0.844 0.854 0.555 1e-146
O22213575 Cytokinin dehydrogenase 1 no no 0.848 0.777 0.547 1e-146
Q9LY71533 Cytokinin dehydrogenase 6 no no 0.929 0.919 0.502 1e-140
Q5JLP4529 Cytokinin dehydrogenase 4 no no 0.834 0.831 0.538 1e-140
Q9LTS3523 Cytokinin dehydrogenase 3 no no 0.861 0.868 0.497 1e-131
Q6YW50524 Cytokinin dehydrogenase 7 no no 0.895 0.900 0.494 1e-126
Q6YW51527 Cytokinin dehydrogenase 6 no no 0.895 0.895 0.488 1e-126
Q5Z620550 Cytokinin dehydrogenase 1 no no 0.853 0.818 0.5 1e-122
>sp|Q67YU0|CKX5_ARATH Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana GN=CKX5 PE=2 SV=1 Back     alignment and function desciption
 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/493 (72%), Positives = 406/493 (82%), Gaps = 17/493 (3%)

Query: 40  ASKLLLTFAICRLIVTVGLTMDPTELLRLG---VYGQLSVDPFDVQTASLDFGML-SRAE 95
           +S LLLTFAIC+LI+ VGL + P+ELLR+G   V G  +V P D+ + S DFGML S  E
Sbjct: 7   SSFLLLTFAICKLIIAVGLNVGPSELLRIGAIDVDGHFTVHPSDLASVSSDFGMLKSPEE 66

Query: 96  PWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTS-NGVVIQMSGSRGR 154
           P AVLHP+SA+D+ R+V+ AY S A  F +SARGHGHSINGQA    NGVV++M+     
Sbjct: 67  PLAVLHPSSAEDVARLVRTAYGS-ATAFPVSARGHGHSINGQAAAGRNGVVVEMNHGV-- 123

Query: 155 RLGSSTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSN 214
              + TP   +P V   E YVDVWGGELW+DVL+ TLEHGLAPKSWTDYLYL+VGGTLSN
Sbjct: 124 ---TGTP---KPLVRPDEMYVDVWGGELWVDVLKKTLEHGLAPKSWTDYLYLTVGGTLSN 177

Query: 215 AGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARIS 274
           AGISGQAFH GPQI+NV ELDVVTGKGE++ CSEE+N+ LFH VLGGLGQFGIITRARIS
Sbjct: 178 AGISGQAFHHGPQISNVLELDVVTGKGEVMRCSEEENTRLFHGVLGGLGQFGIITRARIS 237

Query: 275 LEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSS 334
           LEPAP+RVRWIRVLYS F  FT DQEYLIS+H      KFDYVEGFVIVDEGL+NNWRSS
Sbjct: 238 LEPAPQRVRWIRVLYSSFKVFTEDQEYLISMH---GQLKFDYVEGFVIVDEGLVNNWRSS 294

Query: 335 FFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDL 394
           FFSPRNPVKI+S+ ++G VLYCLEITKNY +S ++  DQEVE L+KKLNFI +SVFTTDL
Sbjct: 295 FFSPRNPVKISSVSSNGSVLYCLEITKNYHDSDSEIVDQEVEILMKKLNFIPTSVFTTDL 354

Query: 395 LYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILI 454
            YVDFLDRVHKAELKLRSK LWEVPHPWLNLF+PKSRI+DFDKGVFKGILGNKT GPILI
Sbjct: 355 QYVDFLDRVHKAELKLRSKNLWEVPHPWLNLFVPKSRISDFDKGVFKGILGNKTSGPILI 414

Query: 455 YPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGI 514
           YPMNK KWD RSS VTPDE+VFYLVA LRSAL +GEE Q LEYL  QNR+IL+FC++A I
Sbjct: 415 YPMNKDKWDERSSAVTPDEEVFYLVALLRSALTDGEETQKLEYLKDQNRRILEFCEQAKI 474

Query: 515 KAKQYLPHYTTQE 527
             KQYLPH+ TQE
Sbjct: 475 NVKQYLPHHATQE 487
Catalyzes the oxidation of cytokinins, a family of N(6)-substituted adenine derivatives that are plant hormones, where the substituent is an isopentenyl group.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 5EC: .EC: 9EC: 9EC: .EC: 1EC: 2
>sp|Q5ZAY9|CKX5_ORYSJ Cytokinin dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CKX5 PE=2 SV=1 Back     alignment and function description
>sp|Q75K78|CKX9_ORYSJ Cytokinin dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CKX9 PE=2 SV=1 Back     alignment and function description
>sp|O22213|CKX1_ARATH Cytokinin dehydrogenase 1 OS=Arabidopsis thaliana GN=CKX1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LY71|CKX6_ARATH Cytokinin dehydrogenase 6 OS=Arabidopsis thaliana GN=CKX6 PE=2 SV=2 Back     alignment and function description
>sp|Q5JLP4|CKX4_ORYSJ Cytokinin dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CKX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTS3|CKX3_ARATH Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 Back     alignment and function description
>sp|Q6YW50|CKX7_ORYSJ Cytokinin dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CKX7 PE=3 SV=1 Back     alignment and function description
>sp|Q6YW51|CKX6_ORYSJ Cytokinin dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CKX6 PE=3 SV=1 Back     alignment and function description
>sp|Q5Z620|CKX10_ORYSJ Cytokinin dehydrogenase 10 OS=Oryza sativa subsp. japonica GN=CKX10 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query527
224085728534 cytokinin oxidase [Populus trichocarpa] 0.922 0.910 0.828 0.0
224062075535 cytokinin oxidase [Populus trichocarpa] 0.922 0.908 0.835 0.0
255538770540 gulonolactone oxidase, putative [Ricinus 0.918 0.896 0.820 0.0
302142560579 unnamed protein product [Vitis vinifera] 0.912 0.830 0.814 0.0
225458157524 PREDICTED: cytokinin dehydrogenase 5 [Vi 0.912 0.917 0.814 0.0
383212272524 cytokinin oxidase/dehydrogenase-like [So 0.907 0.912 0.764 0.0
227809538526 cytokinin oxidase/dehydrogenase [Solanum 0.910 0.912 0.774 0.0
441415448531 cytokinin oxidase/dehydrogenase [Torenia 0.910 0.903 0.753 0.0
356509660524 PREDICTED: LOW QUALITY PROTEIN: cytokini 0.893 0.898 0.749 0.0
147858589515 hypothetical protein VITISV_017949 [Viti 0.893 0.914 0.753 0.0
>gi|224085728|ref|XP_002307681.1| cytokinin oxidase [Populus trichocarpa] gi|222857130|gb|EEE94677.1| cytokinin oxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/491 (82%), Positives = 449/491 (91%), Gaps = 5/491 (1%)

Query: 39  MASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWA 98
           MA+KLLLTFAICRLIVTVGLT+DP+ELLRLGV GQLSVDPFDV+TASLDFG++SR+EP A
Sbjct: 1   MATKLLLTFAICRLIVTVGLTVDPSELLRLGVDGQLSVDPFDVETASLDFGLISRSEPMA 60

Query: 99  VLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSG-SRGRRLG 157
           VLHP SADDI R+V+AAY S + GFT+SARGHGHSINGQAQTSNGVVI+M+G SRG RLG
Sbjct: 61  VLHPGSADDIARLVQAAYLS-SQGFTVSARGHGHSINGQAQTSNGVVIEMNGGSRGSRLG 119

Query: 158 SSTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGI 217
               A  +P V  KE +VDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSN GI
Sbjct: 120 LGNLA--KPQVAVKEMHVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNGGI 177

Query: 218 SGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEP 277
           SGQAF+ GPQI+NV+ELDVVTGKGEL+TCSEE+NS LFHAVLGGLGQFGIITRARI+LEP
Sbjct: 178 SGQAFNHGPQISNVYELDVVTGKGELMTCSEEKNSKLFHAVLGGLGQFGIITRARIALEP 237

Query: 278 APKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSSFFS 337
           AP+RVRWIRVLYS+FSTFT DQEYLIS+H  P++ KFDYVEGFVIVDEGLINNWRSSFFS
Sbjct: 238 APQRVRWIRVLYSNFSTFTGDQEYLISMHGKPSTLKFDYVEGFVIVDEGLINNWRSSFFS 297

Query: 338 PRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYV 397
           PRNPVKI+S+G +GGVLYCLEITKNYDEST DT DQEVE+L+K LNFI S+VFTTDL Y 
Sbjct: 298 PRNPVKISSVGANGGVLYCLEITKNYDESTGDTIDQEVEALMKNLNFIPSTVFTTDLPYT 357

Query: 398 DFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILG-NKTGGPILIYP 456
           DFLDRVH+AELKLR+KGLWEVPHPWLNLF+P+SRIAD D+GVFKGILG NKT GPILIYP
Sbjct: 358 DFLDRVHRAELKLRAKGLWEVPHPWLNLFVPRSRIADLDRGVFKGILGNNKTSGPILIYP 417

Query: 457 MNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKA 516
           MNK+KWD RSSVVTPDEDVFYLVA LRSALDNGEE QSLEYL  QNR+IL+FCD+AGIK 
Sbjct: 418 MNKNKWDQRSSVVTPDEDVFYLVALLRSALDNGEETQSLEYLTDQNRKILRFCDDAGIKV 477

Query: 517 KQYLPHYTTQE 527
           KQYLPHYTT+E
Sbjct: 478 KQYLPHYTTRE 488

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224062075|ref|XP_002300742.1| cytokinin oxidase [Populus trichocarpa] gi|222842468|gb|EEE80015.1| cytokinin oxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255538770|ref|XP_002510450.1| gulonolactone oxidase, putative [Ricinus communis] gi|223551151|gb|EEF52637.1| gulonolactone oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|302142560|emb|CBI19763.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225458157|ref|XP_002280797.1| PREDICTED: cytokinin dehydrogenase 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|383212272|dbj|BAM09006.1| cytokinin oxidase/dehydrogenase-like [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|227809538|gb|ACP40988.1| cytokinin oxidase/dehydrogenase [Solanum tuberosum] Back     alignment and taxonomy information
>gi|441415448|dbj|BAM74648.1| cytokinin oxidase/dehydrogenase [Torenia fournieri] Back     alignment and taxonomy information
>gi|356509660|ref|XP_003523564.1| PREDICTED: LOW QUALITY PROTEIN: cytokinin dehydrogenase 5-like [Glycine max] Back     alignment and taxonomy information
>gi|147858589|emb|CAN81010.1| hypothetical protein VITISV_017949 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query527
TAIR|locus:2018437540 CKX5 "cytokinin oxidase 5" [Ar 0.903 0.881 0.724 2.3e-188
UNIPROTKB|Q5ZAY9534 CKX5 "Cytokinin dehydrogenase 0.908 0.897 0.670 1.5e-170
TAIR|locus:2062714575 CKX1 "cytokinin oxidase/dehydr 0.848 0.777 0.549 7.1e-132
UNIPROTKB|Q5JLP4529 CKX4 "Cytokinin dehydrogenase 0.899 0.896 0.518 1.7e-130
TAIR|locus:2087423533 CKX6 "cytokinin oxidase/dehydr 0.927 0.917 0.501 3.2e-129
TAIR|locus:2164615523 CKX3 "cytokinin oxidase 3" [Ar 0.905 0.912 0.476 8.5e-120
TAIR|locus:2134423524 CKX4 "cytokinin oxidase 4" [Ar 0.823 0.828 0.483 3.3e-111
TAIR|locus:2050349501 CKX2 "cytokinin oxidase 2" [Ar 0.815 0.858 0.467 1.3e-107
UNIPROTKB|Q4ADV8565 CKX2 "Cytokinin dehydrogenase 0.518 0.483 0.477 2.5e-104
TAIR|locus:1005716173524 CKX7 "cytokinin oxidase 7" [Ar 0.851 0.856 0.468 2.5e-104
TAIR|locus:2018437 CKX5 "cytokinin oxidase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1826 (647.8 bits), Expect = 2.3e-188, P = 2.3e-188
 Identities = 357/493 (72%), Positives = 404/493 (81%)

Query:    40 ASKLLLTFAICRLIVTVGLTMDPTELLRLG---VYGQLSVDPFDVQTASLDFGML-SRAE 95
             +S LLLTFAIC+LI+ VGL + P+ELLR+G   V G  +V P D+ + S DFGML S  E
Sbjct:     7 SSFLLLTFAICKLIIAVGLNVGPSELLRIGAIDVDGHFTVHPSDLASVSSDFGMLKSPEE 66

Query:    96 PWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTS-NGVVIQMXXXXXX 154
             P AVLHP+SA+D+ R+V+ AY S A  F +SARGHGHSINGQA    NGVV++M      
Sbjct:    67 PLAVLHPSSAEDVARLVRTAYGS-ATAFPVSARGHGHSINGQAAAGRNGVVVEMNHGVTG 125

Query:   155 XXXXXTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSN 214
                  TP   +P V   E YVDVWGGELW+DVL+ TLEHGLAPKSWTDYLYL+VGGTLSN
Sbjct:   126 -----TP---KPLVRPDEMYVDVWGGELWVDVLKKTLEHGLAPKSWTDYLYLTVGGTLSN 177

Query:   215 AGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARIS 274
             AGISGQAFH GPQI+NV ELDVVTGKGE++ CSEE+N+ LFH VLGGLGQFGIITRARIS
Sbjct:   178 AGISGQAFHHGPQISNVLELDVVTGKGEVMRCSEEENTRLFHGVLGGLGQFGIITRARIS 237

Query:   275 LEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDEGLINNWRSS 334
             LEPAP+RVRWIRVLYS F  FT DQEYLIS+H      KFDYVEGFVIVDEGL+NNWRSS
Sbjct:   238 LEPAPQRVRWIRVLYSSFKVFTEDQEYLISMH---GQLKFDYVEGFVIVDEGLVNNWRSS 294

Query:   335 FFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDL 394
             FFSPRNPVKI+S+ ++G VLYCLEITKNY +S ++  DQEVE L+KKLNFI +SVFTTDL
Sbjct:   295 FFSPRNPVKISSVSSNGSVLYCLEITKNYHDSDSEIVDQEVEILMKKLNFIPTSVFTTDL 354

Query:   395 LYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGPILI 454
              YVDFLDRVHKAELKLRSK LWEVPHPWLNLF+PKSRI+DFDKGVFKGILGNKT GPILI
Sbjct:   355 QYVDFLDRVHKAELKLRSKNLWEVPHPWLNLFVPKSRISDFDKGVFKGILGNKTSGPILI 414

Query:   455 YPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGI 514
             YPMNK KWD RSS VTPDE+VFYLVA LRSAL +GEE Q LEYL  QNR+IL+FC++A I
Sbjct:   415 YPMNKDKWDERSSAVTPDEEVFYLVALLRSALTDGEETQKLEYLKDQNRRILEFCEQAKI 474

Query:   515 KAKQYLPHYTTQE 527
               KQYLPH+ TQE
Sbjct:   475 NVKQYLPHHATQE 487
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM;TAS
GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA
GO:0009690 "cytokinin metabolic process" evidence=IEA
GO:0009823 "cytokinin catabolic process" evidence=ISS;TAS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA
GO:0019139 "cytokinin dehydrogenase activity" evidence=IEA;ISS;TAS
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009694 "jasmonic acid metabolic process" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
UNIPROTKB|Q5ZAY9 CKX5 "Cytokinin dehydrogenase 5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2062714 CKX1 "cytokinin oxidase/dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5JLP4 CKX4 "Cytokinin dehydrogenase 4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2087423 CKX6 "cytokinin oxidase/dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164615 CKX3 "cytokinin oxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134423 CKX4 "cytokinin oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050349 CKX2 "cytokinin oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q4ADV8 CKX2 "Cytokinin dehydrogenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:1005716173 CKX7 "cytokinin oxidase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q67YU0CKX5_ARATH1, ., 5, ., 9, 9, ., 1, 20.72410.90320.8814yesno
Q5ZAY9CKX5_ORYSJ1, ., 5, ., 9, 9, ., 1, 20.67470.90130.8895yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.5.99.120.991
3rd Layer1.5.990.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_II000281
cytokinin oxidase (EC-1.5.99.12) (535 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query527
PLN02441525 PLN02441, PLN02441, cytokinin dehydrogenase 0.0
pfam09265280 pfam09265, Cytokin-bind, Cytokinin dehydrogenase 1 1e-148
pfam01565139 pfam01565, FAD_binding_4, FAD binding domain 2e-24
COG0277459 COG0277, GlcD, FAD/FMN-containing dehydrogenases [ 2e-22
TIGR01678438 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxida 9e-08
TIGR01679419 TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase 3e-06
TIGR01676541 TIGR01676, GLDHase, galactonolactone dehydrogenase 8e-04
PRK11230499 PRK11230, PRK11230, glycolate oxidase subunit GlcD 0.001
COG0812291 COG0812, MurB, UDP-N-acetylmuramate dehydrogenase 0.001
TIGR01677557 TIGR01677, pln_FAD_oxido, plant-specific FAD-depen 0.002
>gnl|CDD|215242 PLN02441, PLN02441, cytokinin dehydrogenase Back     alignment and domain information 
 Score =  874 bits (2260), Expect = 0.0
 Identities = 325/497 (65%), Positives = 378/497 (76%), Gaps = 15/497 (3%)

Query: 34  KELLSMASKLLLTFAICRLIVTVGLTMDPTELLR--LGVYGQLSVDPFDVQTASLDFGML 91
            + L ++ +LLL   +  L  +VGL   P+ LL   L + G LS DP    +AS DFG L
Sbjct: 1   AKSLMLSLRLLLILFLSSLTSSVGLCSSPSSLLPKLLSLDGHLSFDPVSTASASKDFGNL 60

Query: 92  SRAEPWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGS 151
             + P AVL+P+S +DI  +V+AAY   +   T++ARGHGHS+NGQAQ   GVV+ M   
Sbjct: 61  VHSLPAAVLYPSSVEDIASLVRAAY-GSSSPLTVAARGHGHSLNGQAQAPGGVVVDM--- 116

Query: 152 RGRRLGSSTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGT 211
             R L           V     YVDV GGELWIDVL++TL+HGLAP+SWTDYLYL+VGGT
Sbjct: 117 --RSLRGGVRGPPVIVVSGDGPYVDVSGGELWIDVLKATLKHGLAPRSWTDYLYLTVGGT 174

Query: 212 LSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRA 271
           LSNAGISGQAF  GPQI+NV ELDVVTGKGE++TCS  QNS LF AVLGGLGQFGIITRA
Sbjct: 175 LSNAGISGQAFRHGPQISNVLELDVVTGKGEVVTCSPTQNSDLFFAVLGGLGQFGIITRA 234

Query: 272 RISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVD-EGLINN 330
           RI+LEPAPKRVRWIRVLYSDFSTFTRDQE LIS    P    FDYVEGFVIV+  GLINN
Sbjct: 235 RIALEPAPKRVRWIRVLYSDFSTFTRDQERLISR---PPENSFDYVEGFVIVNRNGLINN 291

Query: 331 WRSSFFSPRNPVKITSLGTDGGVLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVF 390
           WRSSFFSP +PV+ +SL +DGGVLYCLE+ K YDE T+DT DQEVESLLK+L+FI   +F
Sbjct: 292 WRSSFFSPSDPVRASSLPSDGGVLYCLEVAKYYDEDTSDTVDQEVESLLKRLSFIPGLLF 351

Query: 391 TTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGG 450
           TTD+ YVDFLDRVH  ELKLRSKGLWEVPHPWLNLF+PKSRIADFD GVFKGIL + T G
Sbjct: 352 TTDVSYVDFLDRVHVEELKLRSKGLWEVPHPWLNLFVPKSRIADFDDGVFKGILLDGTNG 411

Query: 451 PILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCD 510
           PIL+YP+N+ KWDNR+S V PDED+FYLVA LRSAL        LE+L  QN++IL+FC+
Sbjct: 412 PILVYPLNRSKWDNRTSAVIPDEDIFYLVALLRSALP---SGDDLEHLLAQNKEILRFCE 468

Query: 511 EAGIKAKQYLPHYTTQE 527
           +AGI  KQYLPHYTTQE
Sbjct: 469 KAGIGVKQYLPHYTTQE 485

Length = 525
>gnl|CDD|204184 pfam09265, Cytokin-bind, Cytokinin dehydrogenase 1, FAD and cytokinin binding Back     alignment and domain information
>gnl|CDD|216574 pfam01565, FAD_binding_4, FAD binding domain Back     alignment and domain information
>gnl|CDD|223354 COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|233525 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxidases Back     alignment and domain information
>gnl|CDD|130740 TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase Back     alignment and domain information
>gnl|CDD|130737 TIGR01676, GLDHase, galactonolactone dehydrogenase Back     alignment and domain information
>gnl|CDD|183043 PRK11230, PRK11230, glycolate oxidase subunit GlcD; Provisional Back     alignment and domain information
>gnl|CDD|223882 COG0812, MurB, UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|233524 TIGR01677, pln_FAD_oxido, plant-specific FAD-dependent oxidoreductase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 527
PLN02441525 cytokinin dehydrogenase 100.0
KOG1231505 consensus Proteins containing the FAD binding doma 100.0
PRK11230499 glycolate oxidase subunit GlcD; Provisional 100.0
PLN02805555 D-lactate dehydrogenase [cytochrome] 100.0
KOG1232511 consensus Proteins containing the FAD binding doma 100.0
TIGR00387413 glcD glycolate oxidase, subunit GlcD. This protein 100.0
PF09265281 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and c 100.0
COG0277459 GlcD FAD/FMN-containing dehydrogenases [Energy pro 100.0
PRK11183564 D-lactate dehydrogenase; Provisional 100.0
TIGR01676541 GLDHase galactonolactone dehydrogenase. This model 100.0
TIGR01678438 FAD_lactone_ox sugar 1,4-lactone oxidases. This mo 100.0
TIGR01679419 bact_FAD_ox FAD-linked oxidoreductase. This model 100.0
TIGR01677557 pln_FAD_oxido plant-specific FAD-dependent oxidore 100.0
PRK11282352 glcE glycolate oxidase FAD binding subunit; Provis 99.98
PLN02465573 L-galactono-1,4-lactone dehydrogenase 99.97
KOG1233613 consensus Alkyl-dihydroxyacetonephosphate synthase 99.95
PF01565139 FAD_binding_4: FAD binding domain This is only a s 99.94
KOG4730518 consensus D-arabinono-1, 4-lactone oxidase [Defens 99.91
PRK13905298 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.9
PRK12436305 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.88
PRK13906307 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.86
PRK14652302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.85
TIGR00179284 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.82
PRK13903363 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.79
PRK14649295 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.76
PRK14653297 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.72
COG0812291 MurB UDP-N-acetylmuramate dehydrogenase [Cell enve 99.66
PRK14650302 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.65
PRK00046334 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.64
KOG1262543 consensus FAD-binding protein DIMINUTO [General fu 99.6
PRK14648354 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.59
PRK14651273 UDP-N-acetylenolpyruvoylglucosamine reductase; Pro 99.42
PF02913248 FAD-oxidase_C: FAD linked oxidases, C-terminal dom 99.19
PRK13904257 murB UDP-N-acetylenolpyruvoylglucosamine reductase 99.07
PF00941171 FAD_binding_5: FAD binding domain in molybdopterin 96.89
PRK09799258 putative oxidoreductase; Provisional 96.7
TIGR02963467 xanthine_xdhA xanthine dehydrogenase, small subuni 96.69
TIGR03312257 Se_sel_red_FAD probable selenate reductase, FAD-bi 96.44
PRK09971291 xanthine dehydrogenase subunit XdhB; Provisional 95.49
TIGR03199264 pucC xanthine dehydrogenase C subunit. This gene h 95.05
TIGR03195321 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta s 95.03
TIGR02969 1330 mam_aldehyde_ox aldehyde oxidase. Members of this 93.27
COG1319284 CoxM Aerobic-type carbon monoxide dehydrogenase, m 92.81
PLN02906 1319 xanthine dehydrogenase 92.81
COG4630493 XdhA Xanthine dehydrogenase, iron-sulfur cluster a 92.3
PLN00192 1344 aldehyde oxidase 92.1
>PLN02441 cytokinin dehydrogenase Back     alignment and domain information 
Probab=100.00  E-value=2.9e-88  Score=728.22  Aligned_cols=480  Identities=68%  Similarity=1.089  Sum_probs=441.1

Q ss_pred             hhHHHHHHHHHHHHhhhccccCCCCChHHHHccC--CCCcEEcChhhHHHhhhccCCCCCCCccEEEEcCCHHHHHHHHH
Q 042782           36 LLSMASKLLLTFAICRLIVTVGLTMDPTELLRLG--VYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVK  113 (527)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v~~d~~~~~~~~~d~~~~~~~~P~~Vv~P~s~~dV~~iv~  113 (527)
                      ...+++++++++++++++...+.+.....+....  +.+.+.+|+.++..|++||++.++..|.+|++|+|++||+++|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~s~d~g~~~~~~P~aVv~P~S~eDVa~iVr   82 (525)
T PLN02441          3 SLMLSLRLLLILFLSSLTSSVGLCSSPSSLLPKLLSLDGHLSFDPVSTASASKDFGNLVHSLPAAVLYPSSVEDIASLVR   82 (525)
T ss_pred             chHHHHHHHHHHHHHHhhhccCcccCcccccccccccCceEEeCHHHHHHHhcCcccccCCCCCEEEeCCCHHHHHHHHH
Confidence            3455688999999999999888876666443333  48999999999999999999999999999999999999999999


Q ss_pred             HHHhcCcCCceEEEEcCCCCCCCCCcCCCcEEEEcCCCCCCCCCCCCCCCcceEEeCCCcEEEEeCCccHHHHHHHHHhC
Q 042782          114 AAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGSRGRRLGSSTPAALRPHVYEKERYVDVWGGELWIDVLRSTLEH  193 (527)
Q Consensus       114 ~a~~~~~~~i~v~~rG~G~s~~g~~~~~~gvvIdl~~mn~~~~~~~~~~~~ii~id~~~~~v~V~aGv~~~~l~~~l~~~  193 (527)
                      +|++ +.++++|++||+|||+.|++.+.+|++|||++||++  +.++   .+++++.+..+|+|+||++|.++++++.++
T Consensus        83 ~A~~-~~~~~~V~~rGgGHS~~G~a~~~~GivIdms~Ln~i--~~~~---~ii~vd~~~~~VtV~aG~~~~dv~~~l~~~  156 (525)
T PLN02441         83 AAYG-SSSPLTVAARGHGHSLNGQAQAPGGVVVDMRSLRGG--VRGP---PVIVVSGDGPYVDVSGGELWIDVLKATLKH  156 (525)
T ss_pred             HHhh-ccCCceEEEECCCcCCCCCccCCCeEEEECCCCCCc--CccC---ceEEEcCCCCEEEEcCCCCHHHHHHHHHHC
Confidence            9973 227999999999999999999878999999999981  1110   136788888999999999999999999999


Q ss_pred             CCCCCCcCCCccccccccccCCcccCCccccCCccCcEeEEEEEeCCCcEEEcCCCCCcchhhhhhcCCCCeEEEEeEEE
Q 042782          194 GLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARI  273 (527)
Q Consensus       194 Gl~p~~~~~~~~~TVGG~ia~~g~G~~s~~~G~~~d~V~~levV~~~G~v~~~~~~~~~dL~~~~~Gs~G~lGIIt~atl  273 (527)
                      |++|++++++..+||||+++|+|+|+++++||.+.|||+++|||+++|++++|++.+|+||||+++||+|+|||||++||
T Consensus       157 GlaP~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~Vl~leVVtadGevv~~s~~~n~DLF~Av~GglG~fGIIT~atl  236 (525)
T PLN02441        157 GLAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLELDVVTGKGEVVTCSPTQNSDLFFAVLGGLGQFGIITRARI  236 (525)
T ss_pred             CCccCCccccCceEEeEEcCCCCccccccccCcHHHhEEEEEEEeCCceEEEeCCCCChhHHHhhccCCCCcEEEEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCCceEEEEEEEeCCHHHHHHHHHHHHHcCCCCCCchhhhcccchhcc-hhhhhhccccccCCCCCcccccCCCCCc
Q 042782          274 SLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVD-EGLINNWRSSFFSPRNPVKITSLGTDGG  352 (527)
Q Consensus       274 ~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~p~~~e~ld~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~  352 (527)
                      |++|+|+.++|+.+.|.++++++++++.+++.   ..+..+||+|++.+.+ .+.++.|++++|.++++.+...++++++
T Consensus       237 rL~Pap~~v~~~~~~y~~~~~~~~d~~~li~~---~~~~~~d~veg~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (525)
T PLN02441        237 ALEPAPKRVRWIRVLYSDFSTFTRDQERLISR---PPENSFDYVEGFVIVNRNGLINNWRSSFFSPSDPVRASSLPSDGG  313 (525)
T ss_pred             EEEecCCceEEEEEEcCCHHHHHHHHHHHHhc---CCCCCcceEeEEEEeCCCCceeeeecccCCccccchhhccccCCc
Confidence            99999999999999999999999999999872   2445799999999987 4788899998999999988888888889


Q ss_pred             eEEEEEEeecCCCCChhhHHHHHHHHHHHhhhcCCceeeccchhhhhhhhhhhcccHHHHhhhhcCCCcceecccCcccH
Q 042782          353 VLYCLEITKNYDESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRI  432 (527)
Q Consensus       353 ~~llle~~~~~~~~~~~~~~~~~~~ll~~l~~~~g~~~~~d~~~~~~~~~v~~~~~~~~~~~lW~~r~~~~dv~VP~s~l  432 (527)
                      ++||||+++||++.+++.++++++.+++.|++.++..+..|++|.+|++|++..+..+++.++|++||||+|++||.|+|
T Consensus       314 ~~y~le~~~~~~~~~~~~~~~~~~~ll~~L~~~~~~~~~~d~~y~~fl~rv~~~e~~lr~~G~W~~phPWlnlfvp~s~i  393 (525)
T PLN02441        314 VLYCLEVAKYYDEDTSDTVDQEVESLLKRLSFIPGLLFTTDVSYVDFLDRVHVEELKLRSKGLWEVPHPWLNLFVPKSRI  393 (525)
T ss_pred             eEEEEEEEEeeCCCCccchhhHHHHHHhhcCCCCCCceecccCHHHHHHhhhhHHHHHhhcCCcCCCCchhheeCcHHHH
Confidence            99999999999988888999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCccCCCceEEeeCCCcccccccccCCChhhHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHHHHHc
Q 042782          433 ADFDKGVFKGILGNKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEA  512 (527)
Q Consensus       433 ~~~~~~v~~~l~gh~g~G~ih~~p~~~~~~~~~~~~~~p~~~v~~~v~~l~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~  512 (527)
                      .+|.+++++.|+.+..+|++++||+++.+|+.+++.++|+|++||+|+.|++++|+   ++++++|++||++|+++|+++
T Consensus       394 ~~f~~~v~~~i~~~~~~G~~liyP~~~~~~~~~~s~~~P~~~~~y~v~~l~~~~p~---~~~~~~~~~~n~~i~~~~~~~  470 (525)
T PLN02441        394 ADFDDGVFKGILLDGTNGPILVYPLNRSKWDNRTSAVIPDEDIFYLVALLRSALPS---GDDLEHLLAQNKEILRFCEKA  470 (525)
T ss_pred             HHHHHHHHhhcccccCCCeEEEEecccccCCCCCccccCCCCeEEEEEEcCCCCCC---cccHHHHHHHHHHHHHHHHHc
Confidence            99999999999987777999999999999999999999999999999999999983   447999999999999999999


Q ss_pred             CCCceeeCCCCCCCC
Q 042782          513 GIKAKQYLPHYTTQE  527 (527)
Q Consensus       513 ~~~~k~yl~~~~~~~  527 (527)
                      |+|+|||||||+|++
T Consensus       471 g~~~k~Yl~~~~~~~  485 (525)
T PLN02441        471 GIGVKQYLPHYTTQE  485 (525)
T ss_pred             CCceEEcCCCCCCHH
Confidence            999999999999875

>KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>PRK11230 glycolate oxidase subunit GlcD; Provisional Back     alignment and domain information
>PLN02805 D-lactate dehydrogenase [cytochrome] Back     alignment and domain information
>KOG1232 consensus Proteins containing the FAD binding domain [Energy production and conversion] Back     alignment and domain information
>TIGR00387 glcD glycolate oxidase, subunit GlcD Back     alignment and domain information
>PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold Back     alignment and domain information
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>PRK11183 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01676 GLDHase galactonolactone dehydrogenase Back     alignment and domain information
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases Back     alignment and domain information
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase Back     alignment and domain information
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase Back     alignment and domain information
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional Back     alignment and domain information
>PLN02465 L-galactono-1,4-lactone dehydrogenase Back     alignment and domain information
>KOG1233 consensus Alkyl-dihydroxyacetonephosphate synthase [General function prediction only] Back     alignment and domain information
>PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms] Back     alignment and domain information
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase Back     alignment and domain information
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>KOG1262 consensus FAD-binding protein DIMINUTO [General function prediction only] Back     alignment and domain information
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional Back     alignment and domain information
>PF00941 FAD_binding_5: FAD binding domain in molybdopterin dehydrogenase; InterPro: IPR002346 Oxidoreductases, that also bind molybdopterin, have essentially no similarity outside this common domain Back     alignment and domain information
>PRK09799 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR02963 xanthine_xdhA xanthine dehydrogenase, small subunit Back     alignment and domain information
>TIGR03312 Se_sel_red_FAD probable selenate reductase, FAD-binding subunit Back     alignment and domain information
>PRK09971 xanthine dehydrogenase subunit XdhB; Provisional Back     alignment and domain information
>TIGR03199 pucC xanthine dehydrogenase C subunit Back     alignment and domain information
>TIGR03195 4hydrxCoA_B 4-hydroxybenzoyl-CoA reductase, beta subunit Back     alignment and domain information
>TIGR02969 mam_aldehyde_ox aldehyde oxidase Back     alignment and domain information
>COG1319 CoxM Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion] Back     alignment and domain information
>PLN02906 xanthine dehydrogenase Back     alignment and domain information
>COG4630 XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN00192 aldehyde oxidase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query527
3s1d_A516 Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-123
1w1o_A534 Native Cytokinin Dehydrogenase Length = 534 1e-122
2qkn_A516 Crystal Structure Of Maize Cytokinin OxidaseDEHYDRO 1e-122
3s1f_A516 Asp169glu Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-122
2qpm_A516 Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-122
3s1e_A516 Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROG 1e-121
2exr_A524 X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE ( 1e-110
4aut_A468 Crystal Structure Of The Tuberculosis Drug Target D 3e-09
2bvf_A459 Crystal Structure Of 6-Hydoxy-D-Nicotine Oxidase Fr 7e-08
4g3t_A403 Mycobacterium Smegmatis Dpre1 - Hexagonal Crystal F 2e-05
4fdn_A481 Mycobacterium Tuberculosis Dpre1 In Complex With Ct 9e-05
2vfr_A422 Alditol Oxidase From Streptomyces Coelicolor A3(2): 9e-05
>pdb|3S1D|A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine Length = 516 Back     alignment and structure 
Iteration: 1

 Score =  437 bits (1125), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/475 (47%), Positives = 304/475 (64%), Gaps = 19/475 (4%)
Query: 62  PTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKAAYESEAH 121
           P  L  L + G+L  D      AS DFG ++ A P AVL+P+S  D+  ++ AA  +   
Sbjct: 17  PASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGW 76
Query: 122 GFTISARGHGHSINGQAQTSNGVVIQMXXXXXXXXXXXTPAALRPHVYEKERYVDVWGGE 181
            +TI+ RG GHS+ GQA    GVV+ M             A  R +V    RYVD  G +
Sbjct: 77  PYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAA------APPRINVSADGRYVDAGGEQ 130
Query: 182 LWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKG 241
           +WIDVLR++L  G+AP+SWTDYLYL+VGGTLSNAGISGQAF  GPQI+NV E+DV+TG G
Sbjct: 131 VWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHG 190
Query: 242 ELLTCSEEQNSGLFHAVLGGLGQFGIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEY 301
           E++TCS++ N+ LF AVLGGLGQFG+ITRARI++EPAP R RW+R++Y+DF+ F+ DQE 
Sbjct: 191 EMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQER 250
Query: 302 LISLHELPASQKF---DYVEGFVIVDEGLINNW-RSSFFSPRNPVKITSLG--TDGGVLY 355
           L +         F    YVEG V V++ L  +   + FF+  +  +I +L    +   +Y
Sbjct: 251 LTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVY 310
Query: 356 CLEITKNYDE--STADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSK 413
            +E T NYD   + A   DQE+ S+L  L++++   F  D+ Y  FLDRVH +E+ L   
Sbjct: 311 SIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGSEVALNKL 370
Query: 414 GLWEVPHPWLNLFIPKSRIADFDKGVFKGIL-GNKTGGPILIYPMNKHKWDNRSSVVTPD 472
           GLW VPHPWLN+F+P+SRIADFD+GVFKGIL G    GP+++YP+NK  WD+  S  TP 
Sbjct: 371 GLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPS 430
Query: 473 EDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCDEAGIKAKQYLPHYTTQE 527
           EDVFY V+ L S++        L  L  QNR+IL+FCD AGI+ K YL  +T + 
Sbjct: 431 EDVFYAVSLLFSSV----APNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRS 481
>pdb|1W1O|A Chain A, Native Cytokinin Dehydrogenase Length = 534 Back     alignment and structure
>pdb|2QKN|A Chain A, Crystal Structure Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Phenylurea Inhibitor Cppu Length = 516 Back     alignment and structure
>pdb|3S1F|A Chain A, Asp169glu Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine Length = 516 Back     alignment and structure
>pdb|2QPM|A Chain A, Leu492ala Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Benzylurea Inhibitor Cpbu Length = 516 Back     alignment and structure
>pdb|3S1E|A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine Length = 516 Back     alignment and structure
>pdb|2EXR|A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX) FROM Arabidopsis Thaliana At5g21482 Length = 524 Back     alignment and structure
>pdb|4AUT|A Chain A, Crystal Structure Of The Tuberculosis Drug Target Decaprenyl-Phosphoryl-Beta-D-Ribofuranose-2- Oxidoreductase (Dpre1) From Mycobacterium Smegmatis Length = 468 Back     alignment and structure
>pdb|2BVF|A Chain A, Crystal Structure Of 6-Hydoxy-D-Nicotine Oxidase From Arthrobacter Nicotinovorans. Crystal Form 3 (P1) Length = 459 Back     alignment and structure
>pdb|4G3T|A Chain A, Mycobacterium Smegmatis Dpre1 - Hexagonal Crystal Form Length = 403 Back     alignment and structure
>pdb|4FDN|A Chain A, Mycobacterium Tuberculosis Dpre1 In Complex With Ct325 - Hexagonal Crystal Form Length = 481 Back     alignment and structure
>pdb|2VFR|A Chain A, Alditol Oxidase From Streptomyces Coelicolor A3(2): Native Enzyme Length = 422 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query527
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 1e-162
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 1e-161
4feh_A481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 2e-34
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 4e-29
2bvf_A459 6-hydroxy-D-nicotine oxidase; autoflavinylation, e 5e-29
2i0k_A561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 4e-22
3js8_A540 Cholesterol oxidase; cholsterol, organic solvent s 4e-21
3rja_A473 Carbohydrate oxidase; protein-substrate analogue c 6e-21
1zr6_A503 Glucooligosaccharide oxidase; alpha + beta, flavoe 2e-20
3vte_A518 Tetrahydrocannabinolic acid synthase; BI-covalent 2e-18
3fw9_A495 Reticuline oxidase; BI-covalent flavinylation, N-g 7e-18
2ipi_A521 Aclacinomycin oxidoreductase (aknox); anthracyclin 3e-16
2y3s_A530 TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto 2e-15
3pop_A501 GILR oxidase; FAD binding protein, gilvocarcin, gi 2e-14
2wdx_A523 Putative hexose oxidase; oxidoreductase-antibiotic 1e-13
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 8e-10
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 4e-05
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 2e-04
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Length = 524 Back     alignment and structure
 Score =  470 bits (1211), Expect = e-162
 Identities = 220/497 (44%), Positives = 300/497 (60%), Gaps = 16/497 (3%)

Query: 36  LLSMASKLLLTFAICRLIVTVGLTMDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAE 95
           +  +    L   A      T            L + G++         A  DFG ++  +
Sbjct: 2   IAYIEPYFLENDAEAASAATAAGKSTDGVSESLNIQGEILCGGAAADIAGRDFGGMNCVK 61

Query: 96  PWAVLHPASADDITRVVKAAYESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGSRGRR 155
           P AV+ P   +DI   VKAA    +   T++ARG+GHSINGQA    G+V+ MS      
Sbjct: 62  PLAVVRPVGPEDIAGAVKAA--LRSDKLTVAARGNGHSINGQAMAEGGLVVDMS-----T 114

Query: 156 LGSSTPAALRPHVYEKERYVDVWGGELWIDVLRSTL-EHGLAPKSWTDYLYLSVGGTLSN 214
              +          +   +VDV GG LW DVL+  + E+GLAP+SWTDYL L+VGGTLSN
Sbjct: 115 TAENHFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSN 174

Query: 215 AGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQFGIITRARIS 274
           AG+SGQAF  GPQ +NV ELDVVTG G+++TCSE +NS LF +VLGGLGQFGIITRAR+ 
Sbjct: 175 AGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQFGIITRARVL 234

Query: 275 LEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDE-GLINNWRS 333
           L+PAP  VRWIRV+Y++F  FT+D E+L+S         FDYVEGFV V+    +N W +
Sbjct: 235 LQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQ---KNESSFDYVEGFVFVNGADPVNGWPT 291

Query: 334 SFFSPRNPVKITSL-GTDGGVLYCLEITKNY-DESTADTTDQEVESLLKKLNFIQSSVFT 391
               P +    T L  + G VLYCLE+  +Y D  +  T D+ VE L+ +L F +   F 
Sbjct: 292 VPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGRLRFNEGLRFE 351

Query: 392 TDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGILGNKTGGP 451
            DL YVDFL RV ++E   +  G WE PHPWLNLF+ K  I DF++ VFK ++ N   GP
Sbjct: 352 VDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNRTVFKELVKNGVNGP 411

Query: 452 ILIYPMNKHKWDNRSSVVTPDE-DVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFCD 510
           +L+YP+ + +WD+R+SVV P+E ++FY+VA LR       ++ S+E +  QN++I+ +C 
Sbjct: 412 MLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFV-PPCAKVSSVEKMVAQNQEIVHWCV 470

Query: 511 EAGIKAKQYLPHYTTQE 527
           + GI  K YLPHY +QE
Sbjct: 471 KNGIDYKLYLPHYKSQE 487
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Length = 534 Back     alignment and structure
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* Length = 481 Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Length = 422 Back     alignment and structure
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Length = 459 Back     alignment and structure
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Length = 561 Back     alignment and structure
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Length = 540 Back     alignment and structure
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Length = 473 Back     alignment and structure
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Length = 503 Back     alignment and structure
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Length = 518 Back     alignment and structure
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 3fw8_A* 3fw7_A* 3fwa_A* Length = 495 Back     alignment and structure
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Length = 521 Back     alignment and structure
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Length = 530 Back     alignment and structure
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Length = 501 Back     alignment and structure
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Length = 523 Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Length = 560 Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Length = 476 Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Length = 520 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query527
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 100.0
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 100.0
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 100.0
4bby_A658 Alkyldihydroxyacetonephosphate synthase, peroxiso; 100.0
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 100.0
1f0x_A571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 100.0
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 100.0
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 100.0
2bvf_A459 6-hydroxy-D-nicotine oxidase; autoflavinylation, e 100.0
3tsh_A500 Pollen allergen PHL P 4; flavoprotein, BI-covalent 100.0
3rja_A473 Carbohydrate oxidase; protein-substrate analogue c 100.0
4feh_A481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 100.0
1zr6_A503 Glucooligosaccharide oxidase; alpha + beta, flavoe 100.0
3fw9_A495 Reticuline oxidase; BI-covalent flavinylation, N-g 100.0
3vte_A518 Tetrahydrocannabinolic acid synthase; BI-covalent 100.0
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 99.98
3pop_A501 GILR oxidase; FAD binding protein, gilvocarcin, gi 99.97
2y3s_A530 TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto 99.97
2wdx_A523 Putative hexose oxidase; oxidoreductase-antibiotic 99.97
2ipi_A521 Aclacinomycin oxidoreductase (aknox); anthracyclin 99.97
1hsk_A326 UDP-N-acetylenolpyruvoylglucosamine reductase; pep 99.96
2i0k_A561 Oxidoreductase; MIX alpha beta, covalent FAD, flav 99.96
3js8_A540 Cholesterol oxidase; cholsterol, organic solvent s 99.96
3tx1_A322 UDP-N-acetylenolpyruvoylglucosamine reductase; str 99.94
3i99_A357 UDP-N-acetylenolpyruvoylglucosamine reductase; str 99.9
1uxy_A340 MURB, uridine diphospho-N-acetylenolpyruvylglucosa 99.9
2gqt_A268 UDP-N-acetylenolpyruvylglucosamine reductase; pept 99.86
2yvs_A219 Glycolate oxidase subunit GLCE; oxidoreductase; 2. 99.81
1ffv_C287 CUTM, flavoprotein of carbon monoxide dehydrogenas 98.41
1n62_C288 Carbon monoxide dehydrogenase medium chain; CODH, 97.73
2w3s_A462 Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2 97.63
3nvz_B305 Xanthine dehydrogenase/oxidase; hydroxylase, homod 97.24
1t3q_C288 Quinoline 2-oxidoreductase medium subunit; QOR, mo 96.71
3hrd_C296 Nicotinate dehydrogenase FAD-subunit; selenium lig 96.7
1rm6_B324 4-hydroxybenzoyl-COA reductase beta subunit; xanth 93.35
3unc_A 1332 Xanthine dehydrogenase/oxidase; oxidoreductase; HE 93.16
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Back     alignment and structure
Probab=100.00  E-value=9.9e-64  Score=545.48  Aligned_cols=459  Identities=46%  Similarity=0.807  Sum_probs=372.2

Q ss_pred             HHHHHHHhhhccccCCC--------CChHHHHccCCCCcEEcChhhHHHhhhccCCCCCCCccEEEEcCCHHHHHHHHHH
Q 042782           43 LLLTFAICRLIVTVGLT--------MDPTELLRLGVYGQLSVDPFDVQTASLDFGMLSRAEPWAVLHPASADDITRVVKA  114 (527)
Q Consensus        43 ~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~v~~d~~~~~~~~~d~~~~~~~~P~~Vv~P~s~~dV~~iv~~  114 (527)
                      ++.-.|+.+.....+..        ..+++|+   ++++|.+|+..+..|++||+..+...|.+|++|+|++||+++|++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~v~~d~~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~   80 (524)
T 2exr_A            4 YIEPYFLENDAEAASAATAAGKSTDGVSESLN---IQGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKA   80 (524)
T ss_dssp             ------------------------------CC---CSSEEECSHHHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHH
T ss_pred             cccchhhcCchhhhhccccccccHHHHHHhcC---CCCeEEeCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHH
Confidence            44455555555433321        3344444   488999999999999999998889999999999999999999999


Q ss_pred             HH-hcCcCCceEEEEcCCCCCCCCCcCCCcEEEEcCCCCCCCCCCCCCCCcceEEeC-----CC--cEEEEeCCccHHHH
Q 042782          115 AY-ESEAHGFTISARGHGHSINGQAQTSNGVVIQMSGSRGRRLGSSTPAALRPHVYE-----KE--RYVDVWGGELWIDV  186 (527)
Q Consensus       115 a~-~~~~~~i~v~~rG~G~s~~g~~~~~~gvvIdl~~mn~~~~~~~~~~~~ii~id~-----~~--~~v~V~aGv~~~~l  186 (527)
                      |+ +   +++||++||||||+.|++.+.+||+|||++||+           | ++++     ++  .+++||||++|.++
T Consensus        81 a~~~---~~~~v~~~GgGts~~g~~~~~~gvvidl~~m~~-----------i-~i~~~~~~~~~~~~~v~v~aGv~~~~l  145 (524)
T 2exr_A           81 ALRS---DKLTVAARGNGHSINGQAMAEGGLVVDMSTTAE-----------N-HFEVGYLSGGDATAFVDVSGGALWEDV  145 (524)
T ss_dssp             HHHS---SSCCEEEESSSCCSSSTTCCTTSEEEEGGGGTT-----------S-CEEEEECCSSSSSEEEEEETTCBHHHH
T ss_pred             HHhh---cCceEEEECCCcCCCCcccCCCEEEEECcCCCC-----------c-EEeecccCCCCCceEEEEeCCcCHHHH
Confidence            99 7   899999999999999998876899999999999           4 6665     45  79999999999998


Q ss_pred             HHHHH-hCCCCCCCcCCCccccccccccCCcccCCccccCCccCcEeEEEEEeCCCcEEEcCCCCCcchhhhhhcCCCCe
Q 042782          187 LRSTL-EHGLAPKSWTDYLYLSVGGTLSNAGISGQAFHQGPQITNVHELDVVTGKGELLTCSEEQNSGLFHAVLGGLGQF  265 (527)
Q Consensus       187 ~~~l~-~~Gl~p~~~~~~~~~TVGG~ia~~g~G~~s~~~G~~~d~V~~levV~~~G~v~~~~~~~~~dL~~~~~Gs~G~l  265 (527)
                      ++++. ++|++|+++++...+||||+++++|+|+++.+||.++|+|++++||++||++++++..+|+||+|+++||+|+|
T Consensus       146 ~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~~~~dL~~~~~Gs~Gtl  225 (524)
T 2exr_A          146 LKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEIENSELFFSVLGGLGQF  225 (524)
T ss_dssp             HHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCTTSS
T ss_pred             HHHHHHHcCCCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCCCChhHHhHhhcCCCcc
Confidence            77666 99999888888888999999999998999999999999999999999999999999888999999999999999


Q ss_pred             EEEEeEEEeeecCCceEEEEEEEeCCHHHHHHHHHHHHHcCCCCCCchhhhcccchhcch-hhhhhccccccCCCCCccc
Q 042782          266 GIITRARISLEPAPKRVRWIRVLYSDFSTFTRDQEYLISLHELPASQKFDYVEGFVIVDE-GLINNWRSSFFSPRNPVKI  344 (527)
Q Consensus       266 GIIt~atl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~p~~~e~ld~~~~~~~-~~~~~~~~~~~~~~~~~~~  344 (527)
                      ||||+++|||+|.|+...++.+.|++++++.+++..+++.+  .. +++|+||++++++. ..++.|++.++........
T Consensus       226 GiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~~--~~-~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (524)
T 2exr_A          226 GIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQK--NE-SSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDP  302 (524)
T ss_dssp             EEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHTSC--TT-SSCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCG
T ss_pred             EEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHHcC--Cc-chhHhhchhhhhcchhhhhhhhhcccccccccch
Confidence            99999999999999999999999999999999999998863  23 58899999988765 4556666553322211122


Q ss_pred             ccCCC-CCceEEEEEEeecC-CCCChhhHHHHHHHHHHHhhhcCCceeeccchhhhhhhhhhhcccHHHHhhhhcCCCcc
Q 042782          345 TSLGT-DGGVLYCLEITKNY-DESTADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPW  422 (527)
Q Consensus       345 ~~l~~-~~~~~llle~~~~~-~~~~~~~~~~~~~~ll~~l~~~~g~~~~~d~~~~~~~~~v~~~~~~~~~~~lW~~r~~~  422 (527)
                      ..+|. ++.+++++|+++|| +++++++++++++.+++.++..++..+..+..|.+|.++....+...++..+|.++++|
T Consensus       303 ~~~p~~~~~~~llve~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~~~  382 (524)
T 2exr_A          303 TRLPQSCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPW  382 (524)
T ss_dssp             GGSCTTCCSEEEEEEEEEEECTTSCHHHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCCCC
T ss_pred             hcCCcccccEEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhCCCeEeecccchhhhhhhhhhHHHHhhhhcccccCCCe
Confidence            34553 35688999988888 77788899999999999998776666666667777765553334567778899999999


Q ss_pred             eecccCcccHHHHHHHHHHhhcCccCCCceE---EeeCCCcccccccccCCCh-hhHHHHHHHhCCCCCCCcchhhHHHH
Q 042782          423 LNLFIPKSRIADFDKGVFKGILGNKTGGPIL---IYPMNKHKWDNRSSVVTPD-EDVFYLVAFLRSALDNGEEMQSLEYL  498 (527)
Q Consensus       423 ~dv~VP~s~l~~~~~~v~~~l~gh~g~G~ih---~~p~~~~~~~~~~~~~~p~-~~v~~~v~~l~~~~~~~~~~~~~~~~  498 (527)
                      .|++||+++|+++++.+++   +|++|||+|   ++|..+++|.++.+.++|+ +++|+.|..++.+.|.+.+ .+++++
T Consensus       383 ~Dv~VP~s~l~~~~~~v~~---~~~gdgn~h~~i~~~~~~~~~~~r~~~~~~~g~~~~~~v~~~~~~~~~~~~-~~~~~~  458 (524)
T 2exr_A          383 LNLFVSKRDIGDFNRTVFK---ELVKNGVNGPMLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFVPPCAKV-SSVEKM  458 (524)
T ss_dssp             EEEEEEHHHHHHHHHHCCC---CCTTTCCSSCEEEEEEEGGGSCTTSSCCCCSSCSEEEEEEECCCCCTTSCH-HHHHHH
T ss_pred             eEEEECHHHHHHHHHHHHH---HHhCCCCcceEEEEeCCchHHHhHHHhhCCCCccEEEEEEEeccCCCcccc-hHHHHH
Confidence            9999999999999988743   677776554   5677778888899999986 7888888888877665433 579999


Q ss_pred             HHHHHHHHHHHHHcCCCceeeCCCCCCC
Q 042782          499 NHQNRQILKFCDEAGIKAKQYLPHYTTQ  526 (527)
Q Consensus       499 ~~~n~~~~~~~~~~~~~~k~yl~~~~~~  526 (527)
                      +++|++|+++|..+|++.|+||+||.++
T Consensus       459 ~~~~~~i~~~~~~~G~~~~~yl~~~~~~  486 (524)
T 2exr_A          459 VAQNQEIVHWCVKNGIDYKLYLPHYKSQ  486 (524)
T ss_dssp             HHHHHHHHHHHHHTTCCEEESSCCCCSH
T ss_pred             HHHHHHHHHHHHHcCCccEEeecCCCCH
Confidence            9999999999999999999999999864
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Back     alignment and structure
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Back     alignment and structure
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Back     alignment and structure
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A* Back     alignment and structure
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Back     alignment and structure
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A Back     alignment and structure
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Back     alignment and structure
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A* Back     alignment and structure
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Back     alignment and structure
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Back     alignment and structure
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Back     alignment and structure
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Back     alignment and structure
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Back     alignment and structure
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1 Back     alignment and structure
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Back     alignment and structure
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Back     alignment and structure
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes} Back     alignment and structure
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae} Back     alignment and structure
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A* Back     alignment and structure
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A* Back     alignment and structure
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus} Back     alignment and structure
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C* Back     alignment and structure
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C* Back     alignment and structure
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A* Back     alignment and structure
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B* Back     alignment and structure
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3 Back     alignment and structure
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri} Back     alignment and structure
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B* Back     alignment and structure
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 527
d1w1oa1289 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {M 1e-123
d1w1oa2206 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Ma 3e-41
d2i0ka2216 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibac 1e-16
d1wvfa2236 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cres 1e-08
d1e8ga2268 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fung 4e-08
d1f0xa2265 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Esche 8e-08
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Length = 289 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Cytokinin dehydrogenase 1
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]

 Score =  360 bits (926), Expect = e-123
 Identities = 112/258 (43%), Positives = 157/258 (60%), Gaps = 13/258 (5%)

Query: 279 PKRVRWIRVLYSDFSTFTRDQEYLISLHE---LPASQKFDYVEGFVIVDEGLINNWRSS- 334
           P R RW+R +Y+DF+ F+ DQE L +        +     YVEG V V++ L  +  ++ 
Sbjct: 1   PARARWVRFVYTDFAAFSADQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTG 60

Query: 335 FFSPRNPVKITSLGT--DGGVLYCLEITKNYDEST--ADTTDQEVESLLKKLNFIQSSVF 390
           FF+  +  +I +L    +   +Y +E T NYD +T  A   DQE+ S+L  L++++   F
Sbjct: 61  FFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAF 120

Query: 391 TTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKSRIADFDKGVFKGIL-GNKTG 449
             D+ Y  FLDRVH  E+ L   GLW VPHPWLN+F+P+SRIADFD+GVFKGIL G    
Sbjct: 121 QRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIV 180

Query: 450 GPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFC 509
           GP+++YP+NK  WD+  S  TP EDVFY V+ L S++        L  L  QNR+IL+FC
Sbjct: 181 GPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSV----APNDLARLQEQNRRILRFC 236

Query: 510 DEAGIKAKQYLPHYTTQE 527
           D AGI+ K YL  +T + 
Sbjct: 237 DLAGIQYKTYLARHTDRS 254
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Length = 216 Back     information, alignment and structure
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Length = 236 Back     information, alignment and structure
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Length = 268 Back     information, alignment and structure
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 265 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query527
d1w1oa1289 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 100.0
d1w1oa2206 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 100.0
d1wvfa2236 Flavoprotein subunit of p-cresol methylhydroxylase 100.0
d1e8ga2268 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 100.0
d1f0xa2265 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.97
d2i0ka2216 Cholesterol oxidase {Brevibacterium sterolicum [Ta 99.97
d1hska1194 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 99.91
d1uxya1198 Uridine diphospho-N-Acetylenolpyruvylglucosamine r 99.85
d1f0xa1294 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.45
d1e8ga1287 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 98.53
d1wvfa1279 Flavoprotein subunit of p-cresol methylhydroxylase 98.23
d1ffvc2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 96.95
d1t3qc2176 Quinoline 2-oxidoreductase medium subunit QorM {Ps 96.62
d1v97a6223 Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [ 96.46
d1n62c2177 Carbon monoxide (CO) dehydrogenase flavoprotein, N 96.41
d1jroa4167 Xanthine dehydrogenase chain A, domain 3 {Rhodobac 96.21
d1rm6b2216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, 96.14
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Cytokinin dehydrogenase 1
domain: Cytokinin dehydrogenase 1
species: Maize (Zea mays) [TaxId: 4577]

Probab=100.00  E-value=1.4e-45  Score=363.00  Aligned_cols=245  Identities=45%  Similarity=0.847  Sum_probs=205.8

Q ss_pred             CceEEEEEEEeCCHHHHHHHHHHHHHcCCC---CCCchhhhcccchhcchhhhhhcc-ccccCCCCCcccccC--CCCCc
Q 042782          279 PKRVRWIRVLYSDFSTFTRDQEYLISLHEL---PASQKFDYVEGFVIVDEGLINNWR-SSFFSPRNPVKITSL--GTDGG  352 (527)
Q Consensus       279 p~~~~~~~~~f~~~~~~~~~~~~l~~~~~~---~~p~~~e~ld~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l--~~~~~  352 (527)
                      |++++|+++.|+|+++|+++++.|++.+..   ..-..+||+||++++++....+|+ +++|.+.+..+...+  ...++
T Consensus         1 P~rvrw~rl~YsDf~~Ft~DQe~LIs~~~~~~~~~~~~fDYVEG~v~~~~~~~~~~~~s~~f~~~~~~~~~~~~~~~~g~   80 (289)
T d1w1oa1           1 PARARWVRFVYTDFAAFSADQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNAT   80 (289)
T ss_dssp             CSEEEEEEEEESCHHHHHHHHHHHHCBC------CBCSCSEEEEEEEEGGGHHHHHHTTSSSCHHHHHHHHHHHHHTTCS
T ss_pred             CCceEEEEEEEccHHHHHHHHHHHhccCccccccccCCcceEEEEEEecCCCccCCcccccCCccccchhhhhccccCCc
Confidence            789999999999999999999999974310   011259999999999885555554 445654333222211  23567


Q ss_pred             eEEEEEEeecCCCCC--hhhHHHHHHHHHHHhhhcCCceeeccchhhhhhhhhhhcccHHHHhhhhcCCCcceecccCcc
Q 042782          353 VLYCLEITKNYDEST--ADTTDQEVESLLKKLNFIQSSVFTTDLLYVDFLDRVHKAELKLRSKGLWEVPHPWLNLFIPKS  430 (527)
Q Consensus       353 ~~llle~~~~~~~~~--~~~~~~~~~~ll~~l~~~~g~~~~~d~~~~~~~~~v~~~~~~~~~~~lW~~r~~~~dv~VP~s  430 (527)
                      ++||||++++|+..+  .+.++++++++++.|++.+|..+..|++|.+|++||+..+..+++.|+|++||||+|++||.|
T Consensus        81 ~lY~LE~ak~yd~~~~~~~~~d~~~~~lL~~L~~~~~~~f~~Dv~Y~dFL~Rv~~~E~~Lrs~GlW~vPHPWlNlfvP~s  160 (289)
T d1w1oa1          81 TVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRS  160 (289)
T ss_dssp             EEEEEEEEEEC-------CHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSSCCCCEEEEEEGG
T ss_pred             eEEEEEEEEEecCCCCccchhhHHHHHHHhhcCCCCCcceeccCCHHHHHHHhhhhHHHHHhcCCCCCCCcceEEecchh
Confidence            999999999998533  467899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhhcC-ccCCCceEEeeCCCcccccccccCCChhhHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 042782          431 RIADFDKGVFKGILG-NKTGGPILIYPMNKHKWDNRSSVVTPDEDVFYLVAFLRSALDNGEEMQSLEYLNHQNRQILKFC  509 (527)
Q Consensus       431 ~l~~~~~~v~~~l~g-h~g~G~ih~~p~~~~~~~~~~~~~~p~~~v~~~v~~l~~~~~~~~~~~~~~~~~~~n~~~~~~~  509 (527)
                      +|.+|++++++.|+. +..+|+|++||+++.+|+.+++++.|+|++||+|+.|+++++    ++++++|++||++|+++|
T Consensus       161 ~I~~F~~~Vf~~il~~~~~~GpiLvYP~~~~kwd~~~s~v~PdeevfylvalL~sa~~----~~~~~~l~~qN~~il~~c  236 (289)
T d1w1oa1         161 RIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVA----PNDLARLQEQNRRILRFC  236 (289)
T ss_dssp             GHHHHHHHHTTTTTTTSCCCSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC-------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccccCCCCeEEEEEccccccCCCccccCCCCCEEEEEEEecCCCC----cchHHHHHHHHHHHHHHH
Confidence            999999999988885 445799999999999999999999999999999999998754    457999999999999999


Q ss_pred             HHcCCCceeeCCCCCCCC
Q 042782          510 DEAGIKAKQYLPHYTTQE  527 (527)
Q Consensus       510 ~~~~~~~k~yl~~~~~~~  527 (527)
                      +++|+++|||||||+|||
T Consensus       237 ~~aG~~~k~yl~~~~t~~  254 (289)
T d1w1oa1         237 DLAGIQYKTYLARHTDRS  254 (289)
T ss_dssp             HHTTCCCEESSCCCSSHH
T ss_pred             HHcCCcceEeCCCCCCHH
Confidence            999999999999999975
>d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ffvc2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]} Back     information, alignment and structure
>d1t3qc2 d.145.1.3 (C:1-176) Quinoline 2-oxidoreductase medium subunit QorM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1v97a6 d.145.1.3 (A:192-414) Xanthine oxidase, domain 3 (?) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1n62c2 d.145.1.3 (C:1-177) Carbon monoxide (CO) dehydrogenase flavoprotein, N-terminal domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]} Back     information, alignment and structure
>d1jroa4 d.145.1.3 (A:179-345) Xanthine dehydrogenase chain A, domain 3 {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1rm6b2 d.145.1.3 (B:1-216) 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain {Thauera aromatica [TaxId: 59405]} Back     information, alignment and structure