Citrus Sinensis ID: 042911

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470
MARFHSHPPPTLSISPFFLLCLSSTYHDDFSITDCDSNLFPQDYSPPPPPVSCTDDLDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQGIEGGSGGHGGRGACCLVDESKLPEDVWGGDAYSWSSCRSLGVMGVEEGPPARSSTMVVVAAVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG
cccccccccccEEEcccEEEEEccccccccEEEccccccccccccccccccccccccccccccccEEEEEEEEEEcccEEEEEEcEEEEccccEEEcccccEEEEEEEEEEEEEccccEEEEEEEEEEEEcEEEEcccEEEcccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHEEEEccEEEEEccccEEEEEEcEEEEEEEEEEcccEEEEccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHcHHHHHHHcccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEccccccccHHHHHHHcccccccccccccccccccccc
cccEEcccccEEEEEcEEEEEEcccccccEEEEEcccccccccccccccccccHHHccccccccEEEEEEEEEEEcccEEEEEcEEEEEcccEEEEEccccEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEccccEEEEccccccccccccccccccccccccccccccEEEEcccccccccccccEEEHHHcccccccccccccccccccccccccEHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccEEEEccccccEEEEEEEEHcEEEEEEcccEEEEcccccccccccccccccccHHHHHEEEEHHEEEEEcccccEEEccccHHcHcHHHHHcccccccccEEcccccccccccHHHHcccEEEEEEEHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHccEEEEEEcEEccccEEcHHH
marfhshppptlsispFFLLCLsstyhddfsitdcdsnlfpqdyspppppvsctddldgigtldstCQIVSdlnlrrdvyisgkgnfeiltgvkfncpvsgcsiAVNISGNFSLAVNSSIVSGTFELVAQNAsflngsavnttglagdpppqtsgtpqgieggsgghggrgacclvdesklpedvwggdayswsscrslgvmgveegpparsSTMVVVAAVESrwtlegggfhlshfeetKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSnanlgvhgeglpnllgpgdgiEAQRLVLSLFYSIhvrpgsvlcgplenattdahtkayceiqdcpvellhspedcnmnsslsftpqicrvedivvdgpvegsVVRFRRARTisrtiyipqptwgnhpkvftlaglsvksyryydpatrglnfhg
marfhshppptlSISPFFLLCLSSTYHDDFSITDCDSNLFPQDYSPPPPPVSCTDDLDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQGIEGGSGGHGGRGACCLVDESKLPEDVWGGDAYSWSSCRSLGVMGVEEGPPARSSTMVVVAAVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIvvdgpvegsvvrfrrartisrtiyipqptwgnhpkVFTLAGLSVKSYRYYDPATRGLNFHG
MARFHSHPPPTLSISPFFLLCLSSTYHDDFSITDCDSNLFPQDYSpppppVSCTDDLDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQgieggsgghggrgACCLVDESKLPEDVWGGDAYSWSSCRSLGVMGVEEGPPARSSTMVVVAAVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG
************SISPFFLLCLSSTYHDDFSITDCDSNL*****************LDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAV*****************************RGACCLVDESKLPEDVWGGDAYSWSSCRSLGVMGVE*******STMVVVAAVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPAT*******
*******PPPTLSISPFFLLCLSSTYHDDFSITDCDSNLFPQD*S**********DLDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTG***********************GGR*ACC*********DVWGGDAYSWSSCRSL********************AVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG
*********PTLSISPFFLLCLSSTYHDDFSITDCDSNLFPQDYSPPPPPVSCTDDLDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQGIEGGSGGHGGRGACCLVDESKLPEDVWGGDAYSWSSCRSLGVMGVEE*********VVVAAVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG
**RFHSHPPPTLSISPFFLLCLSSTYHDDFSITDCDSNLFPQDYSPPPPPVSCTDDLDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQGIEGGSGGHGGRGACCLVDESKLPEDVWGGDAYSWSSCRSLGVMGV*********TMVVVAAVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MARFHSHPPPTLSISPFFLLCLSSTYHDDFSITDCDSNLFPQDYSPPPPPVSCTDDLDGIGTLDSTCQIVSDLNLRRDVYISGKGNFEILTGVKFNCPVSGCSIAVNISGNFSLAVNSSIVSGTFELVAQNASFLNGSAVNTTGLAGDPPPQTSGTPQGIEGGSGGHGGRGACCLVDESKLPEDVWGGDAYSWSSCRSLGVMGVEEGPPARSSTMVVVAAVESRWTLEGGGFHLSHFEETKTIAMLGVIFAGTYSHLLNSIEFCKIVYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEGLPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHTKAYCEIQDCPVELLHSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query470 2.2.26 [Sep-21-2011]
P37833 407 Aspartate aminotransferas no no 0.087 0.100 0.902 4e-17
P46644 449 Aspartate aminotransferas no no 0.089 0.093 0.833 5e-16
P28734 405 Aspartate aminotransferas N/A no 0.085 0.098 0.825 4e-15
P46645 405 Aspartate aminotransferas no no 0.106 0.123 0.66 9e-14
P28011 418 Aspartate aminotransferas N/A no 0.089 0.100 0.738 7e-13
P46646 403 Aspartate aminotransferas no no 0.082 0.096 0.692 4e-12
O94320 437 Aspartate aminotransferas yes no 0.089 0.096 0.690 2e-11
Q28F67 427 Aspartate aminotransferas yes no 0.165 0.182 0.402 3e-09
P12344 430 Aspartate aminotransferas yes no 0.104 0.113 0.489 1e-08
P00505 430 Aspartate aminotransferas yes no 0.163 0.179 0.363 1e-08
>sp|P37833|AATC_ORYSJ Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1 Back     alignment and function desciption
 Score = 89.7 bits (221), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 37/41 (90%), Positives = 40/41 (97%)

Query: 430 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
           RTIYIPQPTWGNHPKVFTLAGL+V+SYRYYDPATRGL+F G
Sbjct: 127 RTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQG 167
Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 1
>sp|P46644|AAT3_ARATH Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1 Back     alignment and function description
>sp|P28734|AATC_DAUCA Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1 Back     alignment and function description
>sp|P46645|AAT2_ARATH Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2 Back     alignment and function description
>sp|P28011|AAT1_MEDSA Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2 Back     alignment and function description
>sp|P46646|AAT4_ARATH Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2 Back     alignment and function description
>sp|O94320|AATM_SCHPO Aspartate aminotransferase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC725.01 PE=3 SV=1 Back     alignment and function description
>sp|Q28F67|AATM_XENTR Aspartate aminotransferase, mitochondrial OS=Xenopus tropicalis GN=got2 PE=2 SV=1 Back     alignment and function description
>sp|P12344|AATM_BOVIN Aspartate aminotransferase, mitochondrial OS=Bos taurus GN=GOT2 PE=1 SV=2 Back     alignment and function description
>sp|P00505|AATM_HUMAN Aspartate aminotransferase, mitochondrial OS=Homo sapiens GN=GOT2 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query470
296081597 1439 unnamed protein product [Vitis vinifera] 0.346 0.113 0.792 7e-67
359475929 1416 PREDICTED: uncharacterized protein LOC10 0.346 0.115 0.792 7e-67
255550884 1426 conserved hypothetical protein [Ricinus 0.346 0.114 0.780 2e-65
356510059 1447 PREDICTED: uncharacterized protein LOC10 0.346 0.112 0.786 7e-65
356515645 1417 PREDICTED: uncharacterized protein LOC10 0.346 0.115 0.786 1e-64
357466721 850 hypothetical protein MTR_3g110460 [Medic 0.346 0.191 0.780 4e-64
449461397 1448 PREDICTED: uncharacterized protein LOC10 0.346 0.112 0.731 1e-61
449507269 1417 PREDICTED: uncharacterized LOC101205923 0.346 0.115 0.731 1e-61
224088972 1412 predicted protein [Populus trichocarpa] 0.346 0.115 0.731 2e-61
255546253 1195 conserved hypothetical protein [Ricinus 0.4 0.157 0.626 9e-60
>gi|296081597|emb|CBI20602.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 130/164 (79%), Positives = 145/164 (88%), Gaps = 1/164 (0%)

Query: 267 VYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEG 326
           VYGAL ++VK+FLMWNSK+L+DGGGDA VATSLLEASNL+VLK+ S+IHSNANLGVHG+G
Sbjct: 421 VYGALRMSVKMFLMWNSKLLIDGGGDANVATSLLEASNLVVLKESSVIHSNANLGVHGQG 480

Query: 327 LPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHT-KAYCEIQDCPVELL 385
           L NL GPGD IEAQRLVLSLFYSIHV PGSVL GPLENATTDA T + YCE+QDCP ELL
Sbjct: 481 LLNLSGPGDWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDAVTPRLYCELQDCPTELL 540

Query: 386 HSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTIS 429
           H PEDCN+NSSLSFT QICRVEDI V G ++GSVV F RARTI+
Sbjct: 541 HPPEDCNVNSSLSFTLQICRVEDITVQGLIKGSVVHFHRARTIA 584

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359475929|ref|XP_002278525.2| PREDICTED: uncharacterized protein LOC100243932 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550884|ref|XP_002516490.1| conserved hypothetical protein [Ricinus communis] gi|223544310|gb|EEF45831.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356510059|ref|XP_003523758.1| PREDICTED: uncharacterized protein LOC100783686 [Glycine max] Back     alignment and taxonomy information
>gi|356515645|ref|XP_003526509.1| PREDICTED: uncharacterized protein LOC100804207 [Glycine max] Back     alignment and taxonomy information
>gi|357466721|ref|XP_003603645.1| hypothetical protein MTR_3g110460 [Medicago truncatula] gi|355492693|gb|AES73896.1| hypothetical protein MTR_3g110460 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449461397|ref|XP_004148428.1| PREDICTED: uncharacterized protein LOC101205923 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449507269|ref|XP_004162983.1| PREDICTED: uncharacterized LOC101205923 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224088972|ref|XP_002308587.1| predicted protein [Populus trichocarpa] gi|222854563|gb|EEE92110.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255546253|ref|XP_002514186.1| conserved hypothetical protein [Ricinus communis] gi|223546642|gb|EEF48140.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query470
TAIR|locus:2123762 1432 AT4G32920 "AT4G32920" [Arabido 0.344 0.113 0.662 3.1e-98
UNIPROTKB|P37833 407 LOC_Os01g55540 "Aspartate amin 0.087 0.100 0.902 1.5e-14
TAIR|locus:2144226 449 ASP3 "aspartate aminotransfera 0.087 0.091 0.853 9.3e-14
UNIPROTKB|P28734 405 P28734 "Aspartate aminotransfe 0.085 0.098 0.825 5.7e-13
TAIR|locus:2180826 405 ASP2 "aspartate aminotransfera 0.082 0.096 0.820 2.2e-11
TAIR|locus:2026262 405 ASP4 "aspartate aminotransfera 0.082 0.096 0.692 8.2e-10
POMBASE|SPBC725.01 437 SPBC725.01 "aspartate aminotra 0.089 0.096 0.690 1.3e-09
ZFIN|ZDB-GENE-030131-7917 428 got2b "glutamic-oxaloacetic tr 0.1 0.109 0.531 2e-08
UNIPROTKB|Q28F67 427 got2 "Aspartate aminotransfera 0.089 0.098 0.595 2e-07
DICTYBASE|DDB_G0268664 426 aatA "aspartate transaminase" 0.140 0.154 0.462 3.3e-07
TAIR|locus:2123762 AT4G32920 "AT4G32920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 549 (198.3 bits), Expect = 3.1e-98, Sum P(2) = 3.1e-98
 Identities = 108/163 (66%), Positives = 130/163 (79%)

Query:   267 VYGALCITVKIFLMWNSKMLVDGGGDATVATSLLEASNLIVLKKFSIIHSNANLGVHGEG 326
             VYGAL +TVK+FLM  S+M +DGGG   + TS+LE SNL+VLK+ S+I SN NLGVHG+G
Sbjct:   420 VYGALRMTVKVFLMLKSRMFIDGGGVTILGTSMLEISNLLVLKESSVIQSNGNLGVHGQG 479

Query:   327 LPNLLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENATTDAHT-KAYCEIQDCPVELL 385
             L NL G GD IEAQRL+LSLFYSI V  G+VL GPL+NA+T   T K YC+ QDCPVELL
Sbjct:   480 LLNLTGTGDTIEAQRLILSLFYSIQVGAGAVLRGPLQNASTGGLTPKLYCQRQDCPVELL 539

Query:   386 HSPEDCNMNSSLSFTPQICRVEDIVVDGPVEGSVVRFRRARTI 428
             H PEDCN+NSSL FT QICRVEDI V+G ++GSV++F  ART+
Sbjct:   540 HPPEDCNVNSSLPFTLQICRVEDITVEGLIKGSVIQFHLARTV 582
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0006486 "protein glycosylation" evidence=RCA
UNIPROTKB|P37833 LOC_Os01g55540 "Aspartate aminotransferase, cytoplasmic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2144226 ASP3 "aspartate aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P28734 P28734 "Aspartate aminotransferase, cytoplasmic" [Daucus carota (taxid:4039)] Back     alignment and assigned GO terms
TAIR|locus:2180826 ASP2 "aspartate aminotransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026262 ASP4 "aspartate aminotransferase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPBC725.01 SPBC725.01 "aspartate aminotransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7917 got2b "glutamic-oxaloacetic transaminase 2b, mitochondrial (aspartate aminotransferase 2)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q28F67 got2 "Aspartate aminotransferase, mitochondrial" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268664 aatA "aspartate transaminase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
PLN02397 423 PLN02397, PLN02397, aspartate transaminase 2e-19
PRK09257 396 PRK09257, PRK09257, aromatic amino acid aminotrans 2e-13
PTZ00376 404 PTZ00376, PTZ00376, aspartate aminotransferase; Pr 4e-13
COG1448 396 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr 3e-11
pfam00155 357 pfam00155, Aminotran_1_2, Aminotransferase class I 1e-05
>gnl|CDD|215222 PLN02397, PLN02397, aspartate transaminase Back     alignment and domain information 
 Score = 90.0 bits (224), Expect = 2e-19
 Identities = 27/41 (65%), Positives = 32/41 (78%)

Query: 430 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
            TIYIP PTWGNH  +F  AG+ V++YRYYDP TRGL+F G
Sbjct: 143 STIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDG 183

Length = 423
>gnl|CDD|181731 PRK09257, PRK09257, aromatic amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|240390 PTZ00376, PTZ00376, aspartate aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 470
KOG1411 427 consensus Aspartate aminotransferase/Glutamic oxal 99.96
KOG1412 410 consensus Aspartate aminotransferase/Glutamic oxal 99.95
COG1448 396 TyrB Aspartate/tyrosine/aromatic aminotransferase 99.93
PLN02397 423 aspartate transaminase 97.92
PTZ00376 404 aspartate aminotransferase; Provisional 96.86
PRK09257 396 aromatic amino acid aminotransferase; Provisional 96.82
PRK08637 388 hypothetical protein; Provisional 90.61
PLN00143 409 tyrosine/nicotianamine aminotransferase; Provision 81.9
KOG09211282 consensus Dosage compensation complex, subunit MLE 81.36
KOG09211282 consensus Dosage compensation complex, subunit MLE 80.96
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=99.96  E-value=8.9e-31  Score=264.80  Aligned_cols=138  Identities=28%  Similarity=0.449  Sum_probs=125.3

Q ss_pred             ccCCCChhhhhhccccccccccccCCCccccccccc-ccC-CCCeeeeccCcccCccC-------------CCCCCCCCC
Q 042911          330 LLGPGDGIEAQRLVLSLFYSIHVRPGSVLCGPLENA-TTD-AHTKAYCEIQDCPVELL-------------HSPEDCNMN  394 (470)
Q Consensus       330 l~g~Gd~i~aqr~tlSlF~dVp~gP~D~L~~~L~ka-~~D-~p~KVnLgiGaYRdEel-------------~i~eDpsLN  394 (470)
                      -..++.+..+...+.|||.+||+|||||+- .++++ ++| +|+|+|||+|+||||+.             |+.. .++|
T Consensus        11 ~~~~~~~a~~~~~~~s~~s~V~maPpDpIL-GVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~-~~ld   88 (427)
T KOG1411|consen   11 AHRLGLAAAASARASSWWSHVEMAPPDPIL-GVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLAS-LSLD   88 (427)
T ss_pred             hcccchhhhhcccccchhhcCCCCCCCCcc-cHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhh-hccc
Confidence            345777788889999999999999999533 89999 999 99999999999999943             4444 7899


Q ss_pred             Cee-------eeE-----EEeeccceeeccCceeh------------HHHHHHhhccCCCeEEecCCCCCChHHHHhhcC
Q 042911          395 SSL-------SFT-----PQICRVEDIVVDGPVEG------------SVVRFRRARTISRTIYIPQPTWGNHPKVFTLAG  450 (470)
Q Consensus       395 hEY-------sFt-----LlfG~ds~aI~eGRV~g------------gA~FLsR~~tVTVtVyIsdPTW~NH~~IFq~AG  450 (470)
                      +||       +|.     |+||+++++|+++|+.+            +|+||+|+.+ .++||||+|||.||..||+++|
T Consensus        89 KEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~-~~~I~ip~PTWgNh~~if~~ag  167 (427)
T KOG1411|consen   89 KEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYP-SRDIYIPDPTWGNHKNIFKDAG  167 (427)
T ss_pred             chhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhcc-ccceeecCCcccccCccccccC
Confidence            999       777     99999999999999988            5999999999 9999999999999999999999


Q ss_pred             CeeeeeecccCCCCCccCCC
Q 042911          451 LSVKSYRYYDPATRGLNFHG  470 (470)
Q Consensus       451 f~V~eYpYyD~~T~~LDfdg  470 (470)
                      ++++.|+|||++|+++||++
T Consensus       168 ~~~~~yrYyd~~t~gld~~g  187 (427)
T KOG1411|consen  168 LPVKFYRYYDPKTRGLDFKG  187 (427)
T ss_pred             cceeeeeeccccccccchHH
Confidence            99999999999999999975

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism] Back     alignment and domain information
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02397 aspartate transaminase Back     alignment and domain information
>PTZ00376 aspartate aminotransferase; Provisional Back     alignment and domain information
>PRK09257 aromatic amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK08637 hypothetical protein; Provisional Back     alignment and domain information
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional Back     alignment and domain information
>KOG0921 consensus Dosage compensation complex, subunit MLE [Transcription] Back     alignment and domain information
>KOG0921 consensus Dosage compensation complex, subunit MLE [Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
7aat_A 401 X-Ray Structure Refinement And Comparison Of Three 1e-09
1aka_A 401 Structural Basis For The Catalytic Activity Of Aspa 2e-09
3pd6_A 401 Crystal Structure Of Mouse Mitochondrial Aspartate 3e-09
3hlm_A 401 Crystal Structure Of Mouse Mitochondrial Aspartate 4e-09
1ay4_A 394 Aromatic Amino Acid Aminotransferase Without Substr 3e-06
1ajs_A 412 Refinement And Comparison Of The Crystal Structures 9e-06
1ajr_A 412 Refinement And Comparison Of The Crystal Structures 9e-06
3ii0_A 422 Crystal Structure Of Human Glutamate Oxaloacetate T 1e-05
2cst_A 411 Crystal Structure Of The Closed Form Of Chicken Cyt 1e-05
1aat_A 411 Oxoglutarate-Induced Conformational Changes In Cyto 1e-05
4f5i_A 406 Substrate Specificity Conversion Of E. Coli Pyridox 2e-05
4f5k_A 406 Substrate Specificity Conversion Of Aspartate Amino 2e-05
4f4e_A 420 Crystal Structure Of Aromatic-Amino-Acid Aminotrans 3e-05
4eff_A 420 Crystal Structure Of Aromatic-Amino-Acid Aminotrans 3e-05
1czc_A 396 Aspartate Aminotransferase Mutant Atb17139S142N WIT 3e-05
4f5g_A 406 Rational Design And Directed Evolution Of E. Coli A 6e-05
4f5f_A 406 Structure Of Aspartate Aminotransferase Conversion 6e-05
4f5j_A 406 Rational Design And Directed Evolution For Conversi 6e-05
4f5h_A 406 Intercoversion Of Substrate Specificity: E. Coli As 6e-05
1ahy_A 396 Aspartate Aminotransferase Hexamutant Length = 396 6e-05
1tog_A 396 Hydrocinnamic Acid-Bound Structure Of Srhept + A293 6e-05
1toj_A 396 Hydrocinnamic Acid-Bound Structure Of Srhept Mutant 7e-05
1toe_A 396 Unliganded Structure Of Hexamutant + A293d Mutant O 7e-05
4eu1_A 409 Structure Of A Mitochondrial Aspartate Aminotransfe 8e-05
4f5m_A 406 Wild-type E. Coli Aspartate Aminotransferase: A Tem 8e-05
1g7x_A 396 Aspartate Aminotransferase Active Site Mutant N194a 9e-05
1asf_A 396 The Structural Basis For The Reduced Activity Of Th 9e-05
3aat_A 396 Activity And Structure Of The Active-Site Mutants R 9e-05
1b4x_A 396 Aspartate Aminotransferase From E. Coli, C191s Muta 9e-05
1bqa_A 396 Aspartate Aminotransferase P195a Mutant Length = 39 9e-05
2q7w_A 396 Structural Studies Reveals The Inactivation Of E. C 9e-05
1aam_A 396 The Structural Basis For The Altered Substrate Spec 9e-05
1g7w_A 396 Aspartate Aminotransferase Active Site Mutant N194a 9e-05
3zzj_A 396 Structure Of An Engineered Aspartate Aminotransfera 9e-05
2d5y_A 396 Aspartate Aminotransferase Mutant Mc With Isovaleri 9e-05
1g4x_A 396 Aspartate Aminotransferase Active Site Mutant N194a 9e-05
1arh_A 396 Aspartate Aminotransferase, Y225rR386A MUTANT Lengt 9e-05
1aia_A 396 Structural Basis For The Catalytic Activity Of Aspa 9e-05
1qit_A 396 Aspartate Aminotransferase From Escherichia Coli, C 9e-05
1asl_A 396 Crystal Structures Of Escherichia Coli Aspartate Am 9e-05
1qis_A 396 Aspartate Aminotransferase From Escherichia Coli, C 1e-04
2aat_A 396 2.8-Angstroms-Resolution Crystal Structure Of An Ac 1e-04
2d61_A 396 Aspartate Aminotransferase Mutant Ma With Maleic Ac 1e-04
1ix8_A 396 Aspartate Aminotransferase Active Site Mutant V39fN 1e-04
1qir_A 396 Aspartate Aminotransferase From Escherichia Coli, C 1e-04
1g4v_A 396 Aspartate Aminotransferase Active Site Mutant N194a 1e-04
1ix6_A 396 Aspartate Aminotransferase Active Site Mutant V39f 1e-04
1asb_A 396 The Structural Basis For The Reduced Activity Of Th 1e-04
3fsl_A 397 Crystal Structure Of Tyrosine Aminotransferase Trip 3e-04
3tat_A 397 Tyrosine Aminotransferase From E. Coli Length = 397 3e-04
1yoo_A 396 Aspartate Aminotransferase Mutant Atb17 With Isoval 4e-04
1bqd_A 396 Aspartate Aminotransferase P138aP195A DOUBLE MUTANT 7e-04
4h51_A 420 Crystal Structure Of A Putative Aspartate Aminotran 8e-04
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms Of Mitochondrial Aspartate Aminotransferase Length = 401 Back     alignment and structure 
Iteration: 1

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
            +R    SR +Y+P+P+WGNH  +F  AGL +++YRYYDP T  L+F G
Sbjct: 116 LQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTG 164
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate Aminotransferase K258h Lacking Its Pyridoxal-5'-Phosphate-Binding Lysine Residue Length = 401 Back     alignment and structure
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate Aminotransferase, A Newly Identified Kynurenine Aminotransferase-Iv Length = 401 Back     alignment and structure
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate AminotransferaseKYNURENINE AMINOTRANSFERASE IV Length = 401 Back     alignment and structure
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate Length = 394 Back     alignment and structure
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig Cytosolic Aspartate Aminotransferase And Its Complex With 2-Methylaspartate Length = 412 Back     alignment and structure
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig Cytosolic Aspartate Aminotransferase And Its Complex With 2-Methylaspartate Length = 412 Back     alignment and structure
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate Transaminase 1 (Got1) Length = 422 Back     alignment and structure
>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic Aspartate Aminotransferase At 1.9 Angstroms Resolution Length = 411 Back     alignment and structure
>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic Aspartate Aminotransferase Length = 411 Back     alignment and structure
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli Pyridoxal-5'-phosphate Dependent Aspartate Aminotransferase To Tyrosine Aminotransferase: Chimera P4. Length = 406 Back     alignment and structure
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate Aminotransferase To Tyrosine Aminotransferase By The Janus Algorithm: Chimera P6. Length = 406 Back     alignment and structure
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase From Burkholderia Pseudomallei Covalently Bound To Pyridoxal Phosphate Length = 420 Back     alignment and structure
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase From Burkholderia Pseudomallei Length = 420 Back     alignment and structure
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH GLUTARIC ACID Length = 396 Back     alignment and structure
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate Aminotransferase To Tyrosine Aminotransferase: Mutant P2. Length = 406 Back     alignment and structure
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To Tyrosine Aminotransferase: Chimera P1. Length = 406 Back     alignment and structure
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of Substrate Specificity From E.coli Aspartate Aminotransferase To Tyrosine Aminotransferase: Mutant P5. Length = 406 Back     alignment and structure
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate Aminotransferase To Tyrosine Aminotransferase: Chimera P3. Length = 406 Back     alignment and structure
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant Length = 396 Back     alignment and structure
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d Mutant Of E. Coli Aspartate Aminotransferase Length = 396 Back     alignment and structure
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E. Coli Aspartate Aminotransferase Length = 396 Back     alignment and structure
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E. Coli Aspartate Aminotransferase Length = 396 Back     alignment and structure
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase From Trypanosoma Brucei Length = 409 Back     alignment and structure
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template For The Interconversion Of Substrate Specificity And Activity To Tyrosine Aminotransferase By The Janus Algorithm. Length = 406 Back     alignment and structure
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292LR386L Length = 396 Back     alignment and structure
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate Aminotransferase Length = 396 Back     alignment and structure
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y And R386f Of Escherichia Coli Aspartate Aminotransferase Length = 396 Back     alignment and structure
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation, With Bound Maleate Length = 396 Back     alignment and structure
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant Length = 396 Back     alignment and structure
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli L-Aspartate Aminotransferase (S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta) Via Two Mechanisms At Ph 6.0 Length = 396 Back     alignment and structure
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity Of The R292d Active Site Mutant Of Aspartate Aminotransferase From E. Coli Length = 396 Back     alignment and structure
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L Length = 396 Back     alignment and structure
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase Length = 396 Back     alignment and structure
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid Length = 396 Back     alignment and structure
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L Length = 396 Back     alignment and structure
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT Length = 396 Back     alignment and structure
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate Aminotransferase K258h Lacking The Pyridoxal-5'-Phosphate Binding Lysine Residue Length = 396 Back     alignment and structure
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w Mutation, With Bound Maleate Length = 396 Back     alignment and structure
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate Aminotransferase In Two Conformations: Comparison Of An Unliganded Open And Two Liganded Closed Forms Length = 396 Back     alignment and structure
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f Mutation, With Bound Maleate Length = 396 Back     alignment and structure
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An Active-Site Mutant Of Aspartate Aminotransferase From Escherichia Coli Length = 396 Back     alignment and structure
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid Length = 396 Back     alignment and structure
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A Length = 396 Back     alignment and structure
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y Mutation, With Bound Maleate Length = 396 Back     alignment and structure
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f Length = 396 Back     alignment and structure
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Length = 396 Back     alignment and structure
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The D223a(D222a) Active Site Mutant Of E. Coli Aspartate Aminotransferase Length = 396 Back     alignment and structure
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple Mutant (P181q, R183g,A321k) From Escherichia Coli At 2.35 A Resolution Length = 397 Back     alignment and structure
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli Length = 397 Back     alignment and structure
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric Acid Length = 396 Back     alignment and structure
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT Length = 396 Back     alignment and structure
>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase From Leishmania Major Friedlin Length = 420 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
7aat_A 401 Aspartate aminotransferase; transferase(aminotrans 6e-17
3k7y_A 405 Aspartate aminotransferase; aminotrans pyridoxal p 8e-17
4eu1_A 409 Mitochondrial aspartate aminotransferase; ssgcid, 1e-16
2ay1_A 394 Aroat, aromatic amino acid aminotransferase; HET: 2e-16
2q7w_A 396 Aspartate aminotransferase; mechanism-based inhibi 3e-16
4f4e_A 420 Aromatic-amino-acid aminotransferase; ssgcid, stru 4e-16
3fsl_A 397 Aromatic-amino-acid aminotransferase; tyrosine ami 4e-16
1yaa_A 412 Aspartate aminotransferase; HET: PLP; 2.05A {Sacch 8e-16
1ajs_A 412 Aspartate aminotransferase; PIG, in the presence o 9e-15
3rq1_A 418 Aminotransferase class I and II; structural genomi 1e-13
3t18_A 413 Aminotransferase class I and II; PSI-biology, MCSG 1e-12
3meb_A 448 Aspartate aminotransferase; pyridoxal PHOS transfe 6e-11
2x5f_A 430 Aspartate_tyrosine_phenylalanine pyridoxal-5' phos 8e-09
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Length = 401 Back     alignment and structure
 Score = 81.5 bits (202), Expect = 6e-17
 Identities = 24/49 (48%), Positives = 34/49 (69%)

Query: 422 FRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFHG 470
            +R    SR +Y+P+P+WGNH  +F  AGL +++YRYYDP T  L+F G
Sbjct: 116 LQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTG 164
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} Length = 405 Back     alignment and structure
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Length = 409 Back     alignment and structure
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Length = 394 Back     alignment and structure
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Length = 396 Back     alignment and structure
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Length = 420 Back     alignment and structure
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} PDB: 3tat_A* Length = 397 Back     alignment and structure
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Length = 412 Back     alignment and structure
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Length = 412 Back     alignment and structure
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula} Length = 418 Back     alignment and structure
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Length = 448 Back     alignment and structure
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query470
4h51_A 420 Aspartate aminotransferase; ssgcid, structural gen 99.72
3meb_A 448 Aspartate aminotransferase; pyridoxal PHOS transfe 98.88
3k7y_A 405 Aspartate aminotransferase; aminotrans pyridoxal p 98.75
4f4e_A 420 Aromatic-amino-acid aminotransferase; ssgcid, stru 97.82
7aat_A 401 Aspartate aminotransferase; transferase(aminotrans 97.75
4eu1_A 409 Mitochondrial aspartate aminotransferase; ssgcid, 97.42
3dyd_A 427 Tyrosine aminotransferase; PLP, SGC, structural ge 96.81
3fsl_A 397 Aromatic-amino-acid aminotransferase; tyrosine ami 96.05
1yaa_A 412 Aspartate aminotransferase; HET: PLP; 2.05A {Sacch 93.99
1ajs_A 412 Aspartate aminotransferase; PIG, in the presence o 88.57
2ay1_A 394 Aroat, aromatic amino acid aminotransferase; HET: 86.42
2q7w_A 396 Aspartate aminotransferase; mechanism-based inhibi 83.8
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major} Back     alignment and structure
Probab=99.72  E-value=1.5e-19  Score=183.61  Aligned_cols=132  Identities=25%  Similarity=0.326  Sum_probs=103.0

Q ss_pred             hhhhhhccccccccccccCCCccccccccc-ccC-CCCeeeeccCcccCccCCCCC------------CCCCCCee----
Q 042911          336 GIEAQRLVLSLFYSIHVRPGSVLCGPLENA-TTD-AHTKAYCEIQDCPVELLHSPE------------DCNMNSSL----  397 (470)
Q Consensus       336 ~i~aqr~tlSlF~dVp~gP~D~L~~~L~ka-~~D-~p~KVnLgiGaYRdEel~i~e------------DpsLNhEY----  397 (470)
                      +-.|.|.+.|.|.+||.+|+||+. .|.++ ++| +| ||||++|+||||..++|.            |...+|+|    
T Consensus        10 ~~~~~m~~~~~~~~v~~~p~d~i~-~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~   87 (420)
T 4h51_A           10 STQAAMTTAERWQKIQAQAPDVIF-DLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPIS   87 (420)
T ss_dssp             -----CCHHHHHHTCCCCCCCHHH-HHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTT
T ss_pred             cccchhhhhHHHhCCCCCCCChHH-HHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcC
Confidence            345778999999999999999543 68888 889 87 999999999999877772            66789999    


Q ss_pred             ---eeE-----EEeeccc---------eeeccCceehHHHHHHhhcc-CCCeEEecCCCCCChHHHHhhcCCe-eeeeec
Q 042911          398 ---SFT-----PQICRVE---------DIVVDGPVEGSVVRFRRART-ISRTIYIPQPTWGNHPKVFTLAGLS-VKSYRY  458 (470)
Q Consensus       398 ---sFt-----LlfG~ds---------~aI~eGRV~ggA~FLsR~~t-VTVtVyIsdPTW~NH~~IFq~AGf~-V~eYpY  458 (470)
                         +|+     ++||++.         ++..+|.++.++.||.+++. ...+||||+|+|+||..||+.+|++ |+.|+|
T Consensus        88 G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~  167 (420)
T 4h51_A           88 GYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAY  167 (420)
T ss_dssp             CCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEEC
T ss_pred             ChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecc
Confidence               677     6677642         33344444446888888763 3568999999999999999999997 899999


Q ss_pred             ccCCCCCccCC
Q 042911          459 YDPATRGLNFH  469 (470)
Q Consensus       459 yD~~T~~LDfd  469 (470)
                      |++++..+||+
T Consensus       168 ~~~~~~~~d~~  178 (420)
T 4h51_A          168 YDPKTVSLNFE  178 (420)
T ss_dssp             EEGGGTEECHH
T ss_pred             ccccccCCCHH
Confidence            99999988875
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia} Back     alignment and structure
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0 Back     alignment and structure
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A* Back     alignment and structure
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A* Back     alignment and structure
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei} Back     alignment and structure
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Back     alignment and structure
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A* Back     alignment and structure
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1 Back     alignment and structure
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A* Back     alignment and structure
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A* Back     alignment and structure
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query470
d7aata_ 401 Aspartate aminotransferase, AAT {Chicken (Gallus g 99.35
d1yaaa_ 412 Aspartate aminotransferase, AAT {Baker's yeast (Sa 99.31
d1ajsa_ 412 Aspartate aminotransferase, AAT {Pig (Sus scrofa), 99.28
d3tata_ 397 Aromatic aminoacid aminotransferase, AroAT {Escher 99.17
d2q7wa1 396 Aspartate aminotransferase, AAT {Escherichia coli 99.14
d2ay1a_ 394 Aromatic aminoacid aminotransferase, AroAT {Paraco 99.08
>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.35  E-value=6.8e-14  Score=135.33  Aligned_cols=124  Identities=26%  Similarity=0.445  Sum_probs=93.2

Q ss_pred             ccccccccccCCCccccccccc-ccC-CCCeeeeccCcccCccCCCCC------------CCCCCCee-------eeE--
Q 042911          344 LSLFYSIHVRPGSVLCGPLENA-TTD-AHTKAYCEIQDCPVELLHSPE------------DCNMNSSL-------SFT--  400 (470)
Q Consensus       344 lSlF~dVp~gP~D~L~~~L~ka-~~D-~p~KVnLgiGaYRdEel~i~e------------DpsLNhEY-------sFt--  400 (470)
                      +|+|.+||++|+||+. .|.+. ++| +|+||||++|+||||..+++-            +...+|+|       +|+  
T Consensus         1 ~~~~~~~~~~p~d~i~-~~~~~~~~d~~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~a   79 (401)
T d7aata_           1 SSWWSHVEMGPPDPIL-GVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRA   79 (401)
T ss_dssp             CCSSTTCCCCCCCHHH-HHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred             CCccccCCCCCCChHH-HHHHHHhCCCCCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Confidence            5999999999999755 45565 899 999999999999999666551            22457888       566  


Q ss_pred             ---EEeeccceeeccCceeh-------H-----HHHHHhhccCCCeEEecCCCCCChHHHHhhcCCeeeeeecccCCCCC
Q 042911          401 ---PQICRVEDIVVDGPVEG-------S-----VVRFRRARTISRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG  465 (470)
Q Consensus       401 ---LlfG~ds~aI~eGRV~g-------g-----A~FLsR~~tVTVtVyIsdPTW~NH~~IFq~AGf~V~eYpYyD~~T~~  465 (470)
                         +++++......+.++..       +     ..+++.+...-.+|+|++|+|++|..+++.+|.++.+|++++.....
T Consensus        80 ia~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~  159 (401)
T d7aata_          80 SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS  159 (401)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTE
T ss_pred             HHHHHhccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEecccccccc
Confidence               55666554444444432       1     22233445556799999999999999999999999999999887666


Q ss_pred             ccC
Q 042911          466 LNF  468 (470)
Q Consensus       466 LDf  468 (470)
                      +|+
T Consensus       160 ~~~  162 (401)
T d7aata_         160 LDF  162 (401)
T ss_dssp             ECH
T ss_pred             ccH
Confidence            654
>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Back     information, alignment and structure
>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Back     information, alignment and structure
>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure