Citrus Sinensis ID: 043004

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNGGQMNLKDKDS
Secondary Structure (PSIPRED)
cHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccEEEEccccccccccEHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MMQNIKYWlsehptvvnfrwnnaqswgSTWSFLFAAISTYVVAATFLHVFLNlvlprnrriplgpipaiHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLlcfplgtrpsgrvFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFwtaiglpsacfpfvVNCQVVLLVCNLICHFGVLLLHVLkggcngigaWTFNSVLNAVILLLFMNFYVKMYLRNkkigdassaaeqsnggqmnlkdkds
Flexible Loop (DISEMBL)
MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGdassaaeqsnggqmnlkdkds
Low Complexity Region (SEG)
MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFvvncqvvllvcnlICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNGGQMNLKDKDS
Disordered region (IsUnstruct)
****IKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNK************************
Disordered Region (DISOPRED)
*MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYV*******************************
Disordered Region (DISEMBL)
MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGD********************
Disordered Region (DISPRO)
MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRN*************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNGGQMNLKDKDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	295	2.2.26 [Sep-21-2011]
Q86JM5	296	Putative elongation of fa	no	no	0.667	0.665	0.234	4e-08
Q9UTF7	334	Putative elongation of fa	yes	no	0.522	0.461	0.273	3e-06
P25358	347	Elongation of fatty acids	yes	no	0.528	0.449	0.279	3e-06
Q54CJ4	271	Elongation of fatty acids	no	no	0.816	0.889	0.239	5e-06
Q54TC9	268	Elongation of fatty acids	no	no	0.833	0.917	0.217	7e-06
Q9JLJ4	292	Elongation of very long c	yes	no	0.871	0.880	0.235	9e-05
P39540	310	Elongation of fatty acids	no	no	0.505	0.480	0.248	0.0001
Q555E8	251	Putative elongation of fa	no	no	0.494	0.581	0.233	0.0007

>sp|Q86JM5|Y2012_DICDI Putative elongation of fatty acids protein DDB_G0272012 OS=Dictyostelium discoideum GN=DDB_G0272012 PE=3 SV=1

 Score = 58.9 bits (141), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 16/213 (7%)

Query: 10  SEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR-IPLGPIPA 68
           SE    VNF++    +  S +  L + IS Y+V      +F    L RNR+   L  +  
Sbjct: 31  SELFDPVNFKFKFGTTPFSQFQILPSVISLYLVI-----IFSIKFLMRNRKPFSLKYVSI 85

Query: 69  IHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWS 128
           +H+  + + S+V  VGIL              +R       + +C  +     G  ++WS
Sbjct: 86  LHNAILCIWSLVMCVGILYEVI----------KRITAEGPLFTVCETVSGFDKGPAYYWS 135

Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
           Y+FY+S+F  LL T   +LK + L F  +++  +++ + + ++    + Q+  + L T +
Sbjct: 136 YIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCIVVWLCWYFMYSGWNLQLWVVFLNTFV 195

Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVC 221
           +  +Y + F T  G       ++   Q++  +C
Sbjct: 196 HVFMYYFYFQTGRGKTVWWKKYITMIQIIQFIC 228

Could be implicated in synthesis of very long chain fatty acids.
Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8

>sp|Q9UTF7|ELOH1_SCHPO Putative elongation of fatty acids protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B2.03c PE=1 SV=1

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 14/168 (8%)

Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
           Y+ YL+++L L+ T F  LK + L F   ++  +   + F  L    S Q   I L   +
Sbjct: 138 YLNYLTKYLELMDTVFLFLKKKPLAFLHCYHHGITALLCFTQLLGRTSVQWGVIGLNLYV 197

Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLI-CHFGVL----------LLHVLKG 237
           + ++Y Y F  A G       +V   Q++  V +LI C+FG            L HV  G
Sbjct: 198 HVIMYSYYFLAACGRRVWWKQWVTRVQIIQFVLDLILCYFGTYSHIAFRYFPWLPHV--G 255

Query: 238 GCNG-IGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSN 284
            C+G + A  F   + +  L LF+ FY+  Y++     +   AA +++
Sbjct: 256 DCSGSLFAAFFGCGVLSSYLFLFIGFYINTYIKRGAKKNQRKAAGKAD 303

Could be implicated in synthesis of very long chain fatty acids.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|P25358|ELO2_YEAST Elongation of fatty acids protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN1 PE=1 SV=1

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 12/168 (7%)

Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
           Y+ Y+ +F+  + TFF +LKH+KLTF   ++      + +  L  + S   V I L   +
Sbjct: 151 YMNYIVKFIEFIDTFFLVLKHKKLTFLHTYHHGATALLCYTQLMGTTSISWVPISLNLGV 210

Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNL-ICHFGV------LLLHVLK--GGC 239
           + V+Y Y F  A G+      +V   Q++  V ++   +F V      L   +L   G C
Sbjct: 211 HVVMYWYYFLAARGIRVWWKEWVTRFQIIQFVLDIGFIYFAVYQKAVHLYFPILPHCGDC 270

Query: 240 NGIGAWTF-NSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNGG 286
            G    TF    + +  L+LF++FY+ +Y R  K    S   ++++GG
Sbjct: 271 VGSTTATFAGCAIISSYLVLFISFYINVYKR--KGTKTSRVVKRAHGG 316

Involved in synthesis of 1,3-beta-glucan. Could be a subunit of 1,3-beta-glucan synthase. Could be also a component of the membrane bound fatty acid elongation systems that produce the 26-carbon very long chain fatty acids that are precursors for ceramide and sphingolipids. Appears to be involved in the elongation of fatty acids up to 24 carbons. Appears to have the highest affinity for substrates with chain length less than 22 carbons.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q54CJ4|ELOA_DICDI Elongation of fatty acids protein A OS=Dictyostelium discoideum GN=eloA PE=2 SV=1

 Score = 52.0 bits (123), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 26/267 (9%)

Query: 9   LSEHP--TVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPI 66
            S+ P  T+  FRW N  +  S  + LF  + ++   A  L   L + +   + I L   
Sbjct: 12  FSKDPIGTIDRFRWKNEVTPFS--NILFPIVCSFGYLA--LIYGLQIFMKNKKEIKLHGF 67

Query: 67  PAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFF 126
              H+L + L+S++ F+GI++  A          + +       ++C P+    SG V F
Sbjct: 68  AMFHNLFLCLLSLLMFLGIVIPMA----------KYSFPHGLYNIICKPID---SGLVQF 114

Query: 127 WSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTT 186
             Y+FYLS+    + T   +L+ + L F  +++  + + + +  L++    Q V I    
Sbjct: 115 SYYIFYLSKVYEFIDTIIQVLRKKSLLFLHVWHHFITLWLVWANLKYDTGCQWVDISANC 174

Query: 187 LLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNG---IG 243
            ++ V+Y Y F T  G+       +  CQ++  + ++  H      +  +G  N     G
Sbjct: 175 FVHIVMYFYYFQTERGINPWWKKHITTCQIIQFIVDMSSHLA-WHFYDTQGNHNSNYCSG 233

Query: 244 AWTFNSVLNAVILL---LFMNFYVKMY 267
            W  ++  + VIL    LF+ F+VK Y
Sbjct: 234 TWATSAFSDFVILSFLGLFIQFFVKAY 260

Fatty acid elongase with strict substrate specificity for monounsaturated fatty acids, in particular 16:1 (delta-9) to produce the unusual 18:1 (delta-11) fatty acid.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q54TC9|SRE1_DICDI Elongation of fatty acids protein sre1 OS=Dictyostelium discoideum GN=sre1 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 119/271 (43%), Gaps = 25/271 (9%)

Query: 17  NFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVF-LNLVLPRNRRIPLGPIPAIHSLAIT 75
           NFRW +  +  S++ F F+    YV     L +F L  ++   + + L     IH++ + 
Sbjct: 17  NFRWESGVTPLSSYVFPFSTSVIYV-----LVIFALQAIMKNKKGMVLKGFSIIHNINLI 71

Query: 76  LISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSR 135
           ++S     G++ +   +  E           AF  L+C        GR+ FW Y+FYLS+
Sbjct: 72  ILSFSMMSGVMYAAYQQYLEQG---------AFS-LVCEQSSQSVQGRIGFWIYIFYLSK 121

Query: 136 FLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA---ILLTTLLYSVV 192
           +  L+ T    LK + + F  +F+   ++ +++ WL     + V +    L+ + ++ ++
Sbjct: 122 YYELVDTVILALKKKPIIFLHIFHHMAMVPVTWQWLH--DQWLVGSWWCTLVNSFIHVLM 179

Query: 193 YGYRFWTAIGLPSACFPFVVNCQVV-LLVCNLICHFGVLLLHVLKGGCNG-IGAWTFNSV 250
           Y Y   T +G P     ++   Q+V  L    +  +  ++    K  C   +     ++ 
Sbjct: 180 YYYYLQTTLGNPCWFKKYITKAQIVQFLTGTAMVSYWFVIRDSEK--CQAPLSPAIVSNT 237

Query: 251 LNAVILLLFMNFYVKMYLRNKKIGDASSAAE 281
           +N+  ++LF  FY   Y  N +  +  +  E
Sbjct: 238 INSFFIILFGKFYYDSYKSNSRRQEKLNKVE 268

Could be implicated in synthesis of very long chain fatty acids.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9JLJ4|ELOV2_MOUSE Elongation of very long chain fatty acids protein 2 OS=Mus musculus GN=Elovl2 PE=2 SV=1

 Score = 47.8 bits (112), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 44/301 (14%)

Query: 2   MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFL-HVFLNLVLPRNR- 59
           M+ +K + +E    ++  +    S    W  L + + T+++  T+L  ++L     +NR 
Sbjct: 1   MEQLKAFDNEVNAFLDNMFGPRDSRVRGWFLLDSYLPTFILTITYLLSIWLGNKYMKNRP 60

Query: 60  RIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTR 119
            + L  I  +++LAITL+S    V ++LS          SW   +    Q L     G  
Sbjct: 61  ALSLRGILTLYNLAITLLSAYMLVELILS----------SWEGGYNLQCQNLDSAGEGDV 110

Query: 120 PSGRVFFWSYVFYLSRFLHLLRTFFSILKHR--KLTFFQLFNQSMLICM---SFLWLEFS 174
              +V +W   +Y S+ +  L T F +L+ +  ++TF  +++ + +  +      W+   
Sbjct: 111 RVAKVLWW---YYFSKLVEFLDTIFFVLRKKTNQITFLHVYHHASMFNIWWCVLNWIPCG 167

Query: 175 QSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFP----------FVVNCQVVLLVCNLI 224
           QSF      L + ++ ++Y Y      GL  + FP          ++   Q+V  V   I
Sbjct: 168 QSF--FGPTLNSFIHILMYSY-----YGL--SVFPSMHKYLWWKKYLTQAQLVQFVLT-I 217

Query: 225 CHFGVLLLHVLKGGCNGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSN 284
            H    L  V+K      G   F S     +++LF+NFY++ Y R K +       E  N
Sbjct: 218 TH---TLSAVVKPCGFPFGCLIFQSSYMMTLVILFLNFYIQTY-RKKPVKKELQEKEVKN 273

Query: 285 G 285
           G
Sbjct: 274 G 274

Condensing enzyme that catalyzes the synthesis of polyunsaturated very long chain fatty acid (n-6 and n-3 C18-, C20-and C22-PUFA). Essential for the formation of C24:5(n-6) up to C30:5(n-6) PUFAs in testis, these fatty acids being indispensable for normal spermatogenesis and fertility.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|P39540|ELO1_YEAST Elongation of fatty acids protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELO1 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 12/161 (7%)

Query: 129 YVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLL 188
           Y+ Y+++F+    T   +LKHRKLTF   ++      + +  L    +   V + L   +
Sbjct: 145 YLNYMTKFVEFADTVLMVLKHRKLTFLHTYHHGATALLCYNQLVGYTAVTWVPVTLNLAV 204

Query: 189 YSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVL----KGGC----- 239
           + ++Y Y F +A G+      +V   Q+V  + +LI  + VL   ++    K  C     
Sbjct: 205 HVLMYWYYFLSASGIRVWWKAWVTRLQIVQFMLDLIVVYYVLYQKIVAAYFKNACTPQCE 264

Query: 240 NGIGAWTFNSVLNAVI---LLLFMNFYVKMYLRNKKIGDAS 277
           + +G+ T  +   A++   L LF++FY+++Y R    G   
Sbjct: 265 DCLGSMTAIAAGAAILTSYLFLFISFYIEVYKRGSASGKKK 305

May be a membrane bound enzyme involved in the highly specific elongation of saturated 14-carbon fatty acids (14:0) to 16-carbon species (16:0).

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q555E8|Y4669_DICDI Putative elongation of fatty acids protein DDB_G0274669 OS=Dictyostelium discoideum GN=DDB_G0274669 PE=3 SV=1

 Score = 45.1 bits (105), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 21/167 (12%)

Query: 16  VNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR-IPLGPIPAIHSLAI 74
           VN+++N   +  S +  +   +  Y+V      +F    L +NR+   L  I  +H+  +
Sbjct: 37  VNYKFNFGVTPFSQFQIIPIVLVIYLVT-----IFSIKFLMKNRKPFSLKFISILHNAIL 91

Query: 75  TLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLC-FPLGTRPSGRVFFWSYVFYL 133
            + S++  VG+L              +R       + +C  P G    G  ++WSY+FY+
Sbjct: 92  CIWSLIMCVGVLYEII----------KRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYI 141

Query: 134 SRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV 180
           S+F  LL T   +LK + L F  +++     C +  W ++    Q++
Sbjct: 142 SKFYELLDTVIIVLKKKPLIFLHVYHH----CKTVWWKKYITMIQIL 184

Could be implicated in synthesis of very long chain fatty acids.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
224137246	303	predicted protein [Populus trichocarpa]	0.996	0.970	0.737	1e-119
255585130	295	conserved hypothetical protein [Ricinus	0.905	0.905	0.716	1e-111
225458388	301	PREDICTED: elongation of fatty acids pro	0.979	0.960	0.675	1e-106
255538546	302	conserved hypothetical protein [Ricinus	0.918	0.897	0.720	1e-106
224094686	279	predicted protein [Populus trichocarpa]	0.911	0.964	0.685	1e-105
225430858	302	PREDICTED: uncharacterized protein LOC10	0.989	0.966	0.613	1e-104
356540732	323	PREDICTED: elongation of fatty acids pro	0.925	0.845	0.641	1e-101
297839373	281	GNS1/SUR4 membrane family protein [Arabi	0.888	0.932	0.680	1e-100
449448402	316	PREDICTED: uncharacterized protein LOC10	0.915	0.854	0.675	1e-100
15222085	281	GNS1/SUR4 membrane-like protein [Arabido	0.894	0.939	0.686	1e-100

>gi|224137246|ref|XP_002327078.1| predicted protein [Populus trichocarpa] gi|222835393|gb|EEE73828.1| predicted protein [Populus trichocarpa]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/297 (73%), Positives = 259/297 (87%), Gaps = 3/297 (1%)

Query: 1   MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR 60
           ++Q+ KYWLSEHP++VNFRW+  +SWGSTWSFLF+AI+ Y+++A  LH+ ++L+L  NRR
Sbjct: 5   IIQSTKYWLSEHPSIVNFRWSPTESWGSTWSFLFSAITIYLISAVILHLVVSLILRTNRR 64

Query: 61  IPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTT-AFQWLLCFPLGTR 119
           +PLGPIPAIHSLA+ + SVV FVG LLSTAAEIR+T W WRRT TT AFQWLLCFPLGTR
Sbjct: 65  VPLGPIPAIHSLAVAMASVVIFVGTLLSTAAEIRDTRWFWRRTKTTTAFQWLLCFPLGTR 124

Query: 120 PSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQV 179
           PSGRVFFWSY+FYLSRFLHLLRTF ++L+HRKLTFF LFNQS+L+ MSFLWLEFSQSFQV
Sbjct: 125 PSGRVFFWSYIFYLSRFLHLLRTFLTVLEHRKLTFFTLFNQSILLFMSFLWLEFSQSFQV 184

Query: 180 VAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGC 239
           +AILLTTLLYSVVYGYRFWTAIGLPSACFPFVV+CQVVLL CNL+CHFGVL LH+LKGGC
Sbjct: 185 LAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVSCQVVLLGCNLVCHFGVLSLHILKGGC 244

Query: 240 NGIGAWTFNSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNGG-QMNLKDKDS 295
           NGIGAW FNS+LNA+ILLLF+ FY+KMY  NK+ GD+ S  + S+     +L+  DS
Sbjct: 245 NGIGAWGFNSMLNAMILLLFLKFYLKMY-SNKRKGDSLSELKGSSRHLHSSLEKLDS 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585130|ref|XP_002533270.1| conserved hypothetical protein [Ricinus communis] gi|223526895|gb|EEF29102.1| conserved hypothetical protein [Ricinus communis]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/268 (71%), Positives = 232/268 (86%), Gaps = 1/268 (0%)

Query: 1   MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR 60
           M Q++ Y LS HP+++ FRW+++QSWGSTWSFLF++I+ Y+  +  +HVFL+++L R R 
Sbjct: 8   MTQSLTYHLSNHPSIITFRWSHSQSWGSTWSFLFSSITFYLSFSLIMHVFLSIILRRERS 67

Query: 61  IPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRP 120
           +PLGPIPA+HSL ++L+S + F GILLS AAEI+ET W WRR+  T FQWLLCFPLGTRP
Sbjct: 68  VPLGPIPALHSLFMSLLSAIIFSGILLSAAAEIQETKWFWRRS-KTPFQWLLCFPLGTRP 126

Query: 121 SGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV 180
           SGRVFFWSY++Y+SRFLH+LRT F+IL+ RKL+FFQLFN S+L  MSFLWLEFSQSFQV+
Sbjct: 127 SGRVFFWSYIYYVSRFLHMLRTLFTILQQRKLSFFQLFNNSILAFMSFLWLEFSQSFQVL 186

Query: 181 AILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCN 240
           AILL TL+YSVVYGYRFWTAIGLPSACFPFV NCQ+VLL CNL CH GVLLLH++KGGCN
Sbjct: 187 AILLATLVYSVVYGYRFWTAIGLPSACFPFVENCQIVLLGCNLACHVGVLLLHLMKGGCN 246

Query: 241 GIGAWTFNSVLNAVILLLFMNFYVKMYL 268
           GIGAW FNSVLN  ILLLF+NFYVKM+L
Sbjct: 247 GIGAWIFNSVLNGAILLLFLNFYVKMHL 274

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458388|ref|XP_002283511.1| PREDICTED: elongation of fatty acids protein A [Vitis vinifera]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/296 (67%), Positives = 241/296 (81%), Gaps = 7/296 (2%)

Query: 2   MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRI 61
           MQ+IKYWL+EHP +V FRW+++QSWGSTWSFLF +I+ Y+  A FLH+FL L+  R R +
Sbjct: 1   MQSIKYWLAEHPCIVRFRWSHSQSWGSTWSFLFTSIAAYIATAAFLHLFLLLIR-RRRPV 59

Query: 62  PLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPS 121
           PLGPIPA+HSLA+ LISV+ FVGIL S AAEIR+T W WRR+  T  QWL CFPLGTRPS
Sbjct: 60  PLGPIPALHSLAMALISVLIFVGILFSAAAEIRDTRWFWRRS-KTPLQWLFCFPLGTRPS 118

Query: 122 GRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA 181
           GRVFFWSYVFYLSRFLHL RT+  +L+ R+L FFQ+FNQS+L+C S+LWLEFSQSFQV+A
Sbjct: 119 GRVFFWSYVFYLSRFLHLFRTYLKVLRRRRLAFFQVFNQSILLCTSYLWLEFSQSFQVLA 178

Query: 182 ILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNG 241
           IL  TL+YS+VYGYRFWTAIGLPSAC PFVVNCQ++LL CNL+ HFGVL LH LKGGCNG
Sbjct: 179 ILSMTLVYSMVYGYRFWTAIGLPSACPPFVVNCQMILLGCNLVWHFGVLFLHFLKGGCNG 238

Query: 242 IGAWTFNSVLNAVILLLFMNFYVKMYLRNKK----IGDASSAAEQSNGGQMNLKDK 293
           IGA  FNSVLNA ILLLF+NFYVKM+L  ++    +   SS+     G +M ++D+
Sbjct: 239 IGACVFNSVLNAFILLLFLNFYVKMHLSRREDAPLVQPDSSSTRHRTGSEM-MEDQ 293

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538546|ref|XP_002510338.1| conserved hypothetical protein [Ricinus communis] gi|223551039|gb|EEF52525.1| conserved hypothetical protein [Ricinus communis]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/272 (72%), Positives = 229/272 (84%), Gaps = 1/272 (0%)

Query: 2   MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRI 61
           +   K  LSEHP++VNF+W+  ++WGSTWSFLF+AIS Y+++A  LH+ L L L RNRR+
Sbjct: 5   LSTFKTCLSEHPSIVNFQWSITRTWGSTWSFLFSAISIYIISAVTLHLLLYLFLSRNRRV 64

Query: 62  PLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTT-AFQWLLCFPLGTRP 120
            LGP+PAIHSLA+ LIS   F+G+L STAAEIRET W WRRT TT AFQWLLCFPLGTRP
Sbjct: 65  SLGPVPAIHSLAVALISAFIFIGLLFSTAAEIRETRWFWRRTKTTTAFQWLLCFPLGTRP 124

Query: 121 SGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV 180
           +GRVFFWSYVFYLSRF HLLRTFF IL++RKL+FF LFNQS+L+ MSFLWLEFSQSFQV+
Sbjct: 125 TGRVFFWSYVFYLSRFFHLLRTFFIILQYRKLSFFTLFNQSILLLMSFLWLEFSQSFQVL 184

Query: 181 AILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCN 240
           AILLTTLL SVVYGYRFWTA+GLP A F FVVNCQ VLL CN++CHFGVL LH LKGGCN
Sbjct: 185 AILLTTLLNSVVYGYRFWTAMGLPRAHFLFVVNCQFVLLGCNIVCHFGVLFLHFLKGGCN 244

Query: 241 GIGAWTFNSVLNAVILLLFMNFYVKMYLRNKK 272
           G+ AW  NSVLN VIL+LF+ FYVK++L  +K
Sbjct: 245 GMMAWGLNSVLNGVILVLFLRFYVKVHLIKRK 276

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094686|ref|XP_002310199.1| predicted protein [Populus trichocarpa] gi|222853102|gb|EEE90649.1| predicted protein [Populus trichocarpa]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/270 (68%), Positives = 223/270 (82%), Gaps = 1/270 (0%)

Query: 3   QNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIP 62
           Q + Y+LS+HP++V FRW++ QSWGSTWSFL  +I+ Y+     +H+FL + + R R +P
Sbjct: 4   QTLIYYLSQHPSIVTFRWSHIQSWGSTWSFLLTSIAFYLTFCALVHLFLQIFIKRGRTVP 63

Query: 63  LGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSG 122
           LGPIPA +SL + LISVV F GILLSTAAEI+ET W WRR+ T  FQWLLCFPLGTRPSG
Sbjct: 64  LGPIPAAYSLFMALISVVIFSGILLSTAAEIQETRWFWRRSKT-PFQWLLCFPLGTRPSG 122

Query: 123 RVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAI 182
           RVFFWSY++YLSR+LH+ RTFF+IL+ RKL  FQL N S+L  MSFLWLEFSQSFQV+AI
Sbjct: 123 RVFFWSYMYYLSRYLHMFRTFFTILRLRKLVSFQLVNNSILTFMSFLWLEFSQSFQVLAI 182

Query: 183 LLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNGI 242
           L+ TL+YS++YGYRFWTA+GLPSACFPFV+NCQ+VLL CN+ CH GVL LH +KGGCNGI
Sbjct: 183 LIATLVYSIIYGYRFWTAVGLPSACFPFVLNCQIVLLGCNVACHVGVLSLHFMKGGCNGI 242

Query: 243 GAWTFNSVLNAVILLLFMNFYVKMYLRNKK 272
           GAW FNSVLN  IL LF+NFYVKMYL  +K
Sbjct: 243 GAWWFNSVLNGAILFLFLNFYVKMYLGKRK 272

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430858|ref|XP_002274241.1| PREDICTED: uncharacterized protein LOC100246092 [Vitis vinifera]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/300 (61%), Positives = 232/300 (77%), Gaps = 8/300 (2%)

Query: 1   MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR 60
           M+Q + YWLSEHP ++ FRW+  QSWGSTWSFL  +++ Y+  +  LH+ L ++  R R 
Sbjct: 4   MIQRLVYWLSEHPAIIKFRWSPTQSWGSTWSFLLTSMAFYLTLSLVLHLIL-VLFRRRRP 62

Query: 61  IPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRP 120
           +PLGPIPA++SL++ LIS V F G L S AAEIR+T W WRR+ T   QWLLCFPLGTRP
Sbjct: 63  VPLGPIPAVYSLSMALISAVIFTGTLFSAAAEIRDTRWFWRRSKT-PLQWLLCFPLGTRP 121

Query: 121 SGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV 180
           SGR FFWSY +YLSRFLH+ RT+F+IL+HRKL    +FN  ML+CMSFLWLEFSQSFQ+V
Sbjct: 122 SGRAFFWSYAYYLSRFLHMFRTYFTILEHRKLGLLNIFNNLMLLCMSFLWLEFSQSFQLV 181

Query: 181 AILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCN 240
            I+L TL+YSVVYGY+FWTAIGLPS CFPFV++CQ+VLL  N++CH GVLLLH+ KGGCN
Sbjct: 182 EIMLATLVYSVVYGYKFWTAIGLPSTCFPFVLSCQMVLLGSNVLCHVGVLLLHLRKGGCN 241

Query: 241 GIGAWTFNSVLNAVILLLFMNFYV-KMYLRNKKIGDASS-----AAEQSNGGQMNLKDKD 294
           GIGAW FNSVLNA ILLLF+N +V KM+LR +++ D  S     +A +    +  +KDK+
Sbjct: 242 GIGAWIFNSVLNAAILLLFVNSFVRKMHLRRRQVEDDDSVLHSCSASEETKVENRIKDKN 301

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540732|ref|XP_003538839.1| PREDICTED: elongation of fatty acids protein A-like [Glycine max]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 177/276 (64%), Positives = 220/276 (79%), Gaps = 3/276 (1%)

Query: 1   MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR 60
           +M+++ ++LS+HP +V FRW++   WGSTWSFLF++I++YVV + FLH+ L  +L R R 
Sbjct: 16  VMKSLNFYLSDHPAIVTFRWSHDLCWGSTWSFLFSSIASYVVVSIFLHLTLAFLLRRGRP 75

Query: 61  IPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRP 120
           +PLGPIPA+HSL++++IS   F G+L+S AAEI+ET W WRR + T  QWLLCFPLGTRP
Sbjct: 76  VPLGPIPALHSLSMSVISATIFAGLLVSAAAEIKETRWLWRR-YKTPLQWLLCFPLGTRP 134

Query: 121 SGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV 180
           SGRVFFWSYVFYLSRFLH+LRT   +L+ RKL FFQLF  ++   MSFLWLEFSQSFQV+
Sbjct: 135 SGRVFFWSYVFYLSRFLHMLRTVLVVLRRRKLVFFQLFYHAISTFMSFLWLEFSQSFQVL 194

Query: 181 AILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCN 240
           AIL TTL +SV+YGYRFWT++    AC P V+NCQ+ LL CNL+CH  VLLLH L GGCN
Sbjct: 195 AILFTTLAFSVMYGYRFWTSVAARGACLPLVLNCQIALLGCNLVCHVAVLLLHFLTGGCN 254

Query: 241 GIGAWTFNSVLNAVILLLFMNFYVKMYL--RNKKIG 274
           GIGAW FNSVLN  ILLLF+NFYV+MYL  R K+ G
Sbjct: 255 GIGAWVFNSVLNGAILLLFLNFYVRMYLARRRKRKG 290

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839373|ref|XP_002887568.1| GNS1/SUR4 membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297333409|gb|EFH63827.1| GNS1/SUR4 membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/266 (68%), Positives = 215/266 (80%), Gaps = 4/266 (1%)

Query: 4   NIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAAT---FLHVFLNLVLPRNRR 60
            + Y+L+EHPT+VNFRW+  QS+ STWSFLF A+S+YV+AA     L + +  +  R R 
Sbjct: 2   TLNYYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYVIAAVTLHLLLLIILSLCHRRRG 61

Query: 61  IPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRP 120
             LGPIPA+HSL I+++S V FVGILLS AAEIR+T W WRRT TTA QW LCFP+GTR 
Sbjct: 62  FSLGPIPALHSLTISIVSAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGTRA 121

Query: 121 SGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV 180
           SGRVFFWSY FYLSRFLHL RTFFS+++ RKL+FFQL NQS L+C+SFLWLE+SQSFQVV
Sbjct: 122 SGRVFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQSSLLCISFLWLEYSQSFQVV 181

Query: 181 AILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLK-GGC 239
           AILLTT+ Y+VVYGYRFWT IGL  ACFPFVVNCQ +LL C  +CH GVL +H++K GGC
Sbjct: 182 AILLTTVSYAVVYGYRFWTEIGLRGACFPFVVNCQAILLGCMTVCHVGVLCIHLVKRGGC 241

Query: 240 NGIGAWTFNSVLNAVILLLFMNFYVK 265
           NGIGAW FNSVLNAVI LL++ FY K
Sbjct: 242 NGIGAWLFNSVLNAVITLLYLKFYCK 267

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448402|ref|XP_004141955.1| PREDICTED: uncharacterized protein LOC101205262 [Cucumis sativus]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/271 (67%), Positives = 224/271 (82%), Gaps = 1/271 (0%)

Query: 2   MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRI 61
           + +  YWLSEHP++V FRW++  SWGSTWSFLF++I+ Y+  +T LH+FL L+L   R +
Sbjct: 8   INDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAISTALHLFLTLLLRPGRSV 67

Query: 62  PLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPS 121
           PLGPIPAIHSL++ LIS +   GILLS+ AEIR+T W WRR+  T FQWLLCFPLGTRPS
Sbjct: 68  PLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRS-KTPFQWLLCFPLGTRPS 126

Query: 122 GRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA 181
           GRVFFWSY++YLSRF H+ RT F+IL  R+L+FFQLFN S+   MSF+WLEFSQSFQV+A
Sbjct: 127 GRVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFMWLEFSQSFQVLA 186

Query: 182 ILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNG 241
           IL T+++Y+VVYGYRFWTAIGL  ACFPFVVNCQ VLL CNL CH GVLLLH +KGGCNG
Sbjct: 187 ILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFMKGGCNG 246

Query: 242 IGAWTFNSVLNAVILLLFMNFYVKMYLRNKK 272
           IGAW+FNSVLN  ILLLF+NFY+K++L + +
Sbjct: 247 IGAWSFNSVLNGAILLLFLNFYLKIHLGDTE 277

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15222085|ref|NP_177637.1| GNS1/SUR4 membrane-like protein [Arabidopsis thaliana] gi|5882724|gb|AAD55277.1|AC008263_8 F25A4.4 [Arabidopsis thaliana] gi|12323881|gb|AAG51907.1|AC013258_1 hypothetical protein; 39717-38781 [Arabidopsis thaliana] gi|332197539|gb|AEE35660.1| GNS1/SUR4 membrane-like protein [Arabidopsis thaliana]

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/268 (68%), Positives = 216/268 (80%), Gaps = 4/268 (1%)

Query: 2   MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLP---RN 58
           M    Y+L+EHPT+VNFRW+  QS+ STWSFLF A+S+Y++AA  LH+ L + L    R 
Sbjct: 1   MTTFNYYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRR 60

Query: 59  RRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGT 118
           R   LGPIPA+HSL I++IS V FVGILLS AAEIR+T W WRRT TTA QW LCFP+GT
Sbjct: 61  RGFSLGPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGT 120

Query: 119 RPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQ 178
           R SGRVFFWSY FYLSRFLHL RTFFS+++ RKL+FFQL NQS L+C+SFLWLE+SQSFQ
Sbjct: 121 RASGRVFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQSSLLCISFLWLEYSQSFQ 180

Query: 179 VVAILLTTLLYSVVYGYRFWTAIGLPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLK-G 237
           VVAILLTT+ Y+VVYGYRFWT IGL  ACFPFV NCQ +LL C  +CH GVL +H++K G
Sbjct: 181 VVAILLTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRG 240

Query: 238 GCNGIGAWTFNSVLNAVILLLFMNFYVK 265
           GCNGIGAW FNSVLNAVI LL++ FY K
Sbjct: 241 GCNGIGAWLFNSVLNAVITLLYLKFYCK 268

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
TAIR|locus:2027207	281	AT1G75000 "AT1G75000" [Arabido	0.894	0.939	0.664	8.4e-97
TAIR|locus:2115395	289	HOS3-1 "AT4G36830" [Arabidopsi	0.905	0.923	0.605	1.1e-89
TAIR|locus:2081116	278	AT3G06470 "AT3G06470" [Arabido	0.864	0.917	0.319	2.8e-34
TAIR|locus:2081126	298	AT3G06460 "AT3G06460" [Arabido	0.847	0.838	0.345	1.3e-31
DICTYBASE|DDB_G0277569	312	DDB_G0277569 "GNS1/SUR4 family	0.810	0.766	0.267	1.9e-19
DICTYBASE|DDB_G0272012	296	DDB_G0272012 "GNS1/SUR4 family	0.844	0.841	0.250	3.9e-11
DICTYBASE|DDB_G0281821	268	eloB "steroid isomerase" [Dict	0.857	0.944	0.212	5.9e-10
MGI|MGI:1858960	292	Elovl2 "elongation of very lon	0.786	0.794	0.237	5.9e-08
SGD|S000000630	347	FEN1 "Fatty acid elongase, inv	0.905	0.769	0.239	7.9e-07
DICTYBASE|DDB_G0292896	271	eloA "fatty acid elongase ELO"	0.698	0.760	0.241	9.5e-07

TAIR|locus:2027207 AT1G75000 "AT1G75000" [Arabidopsis thaliana (taxid:3702)]

 Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
 Identities = 178/268 (66%), Positives = 209/268 (77%)

Query:     2 MQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLP-RNRR 60
             M    Y+L+EHPT+VNFRW+  QS+ STWSFLF A+S+Y++AA  LH+ L + L   NRR
Sbjct:     1 MTTFNYYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRR 60

Query:    61 --IPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGT 118
                 LGPIPA+HSL I++IS V FVGILLS AAEIR+T W WRRT TTA QW LCFP+GT
Sbjct:    61 RGFSLGPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGT 120

Query:   119 RPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQ 178
             R SGRVFFWSY FYLSRFLHL RTFFS+++ RKL+FFQL NQS L+C+SFLWLE+SQSFQ
Sbjct:   121 RASGRVFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQSSLLCISFLWLEYSQSFQ 180

Query:   179 VVAILLTTLLYSVVYGYRFWTAIGLPSACFPFXXXXXXXXXXXXXICHFGVLLLHVLK-G 237
             VVAILLTT+ Y+VVYGYRFWT IGL  ACFPF             +CH GVL +H++K G
Sbjct:   181 VVAILLTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRG 240

Query:   238 GCNGIGAWTFNSVLNAVILLLFMNFYVK 265
             GCNGIGAW FNSVLNAVI LL++ FY K
Sbjct:   241 GCNGIGAWLFNSVLNAVITLLYLKFYCK 268

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

TAIR|locus:2115395 HOS3-1 "AT4G36830" [Arabidopsis thaliana (taxid:3702)]

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 163/269 (60%), Positives = 202/269 (75%)

Query:     1 MMQNIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR 60
             ++ +I Y+LSEHP +V FRW+N+QSWGSTWSFLF +IS Y+  ++ LH+ L+ V   NR 
Sbjct:     5 LINSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRRSNRS 64

Query:    61 IPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHT-TAFQWLLCFPLGTR 119
             +PLG IP IHSL ++++S   F GILLS AAEIR+T W WRR+ T T  QWLLCFPLGTR
Sbjct:    65 VPLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTR 124

Query:   120 PSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQV 179
             PSGRVFFWSYVFYL+RFLH+ RT F++L+ R+L   QLF  S++   SFLWLEFSQS+Q+
Sbjct:   125 PSGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQI 184

Query:   180 VAILLTTLLYSVVYGYRFWTAIGLPSACFP-FXXXXXXXXXXXXXICHFGVLLLHVLKGG 238
             +AIL TTL+YSVVYGYRFWT  GLP + FP F             + H GVL +H+ KGG
Sbjct:   185 LAILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMHLFKGG 244

Query:   239 CNGIGAWTFNSVLNAVILLLFMNFYVKMY 267
             CNGIGAW  NSVLN  ILLLF+NFYV+M+
Sbjct:   245 CNGIGAWGLNSVLNGAILLLFLNFYVRMH 273

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

TAIR|locus:2081116 AT3G06470 "AT3G06470" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 87/272 (31%), Positives = 139/272 (51%)

Query:     4 NIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPL 63
             ++ YWL  HP + NF W   ++ GST  F+   +S Y+ A   L   ++ +   + RI L
Sbjct:     7 SLTYWLVNHPYISNFTWIEGETLGSTVFFVSVVVSVYLSATFLLRSAIDSLPSLSPRI-L 65

Query:    64 GPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGR 123
              PI A+HSL + L+S+V  VG  LS  +    +    R  H       +CFP+  +P+G 
Sbjct:    66 KPITAVHSLILCLLSLVMAVGCTLSITSSHASSDPMARFLHA------ICFPVDVKPNGP 119

Query:   124 VFFWSYVFYLSRFLHLLRTFFSILKH--RKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA 181
             +FFW+ VFYLS+ L    T   IL    ++L+F  +++ + ++ M +LWL   QS   +A
Sbjct:   120 LFFWAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTRQSMFPIA 179

Query:   182 ILLTTLLYSVVYGYRFWTAIGLPSACFPFXXXXXXXXXXXXXICHFGV----LLLHVLKG 237
             ++  + ++ ++YGY F  A+G      P              +  FG+    L  H+   
Sbjct:   180 LVTNSTVHVIMYGYYFLCAVGSR----PKWKRLVTDCQIVQFVFSFGLSGWMLREHLFGS 235

Query:   238 GCNGIGAWTFNSVLNAVILLLFMNFYVKMYLR 269
             GC GI  W FN+  NA +L LF NF+ K Y++
Sbjct:   236 GCTGIWGWCFNAAFNASLLALFSNFHSKNYVK 267

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:2081126 AT3G06460 "AT3G06460" [Arabidopsis thaliana (taxid:3702)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 93/269 (34%), Positives = 135/269 (50%)

Query:     5 IKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPR-NRRIPL 63
             + YWL  HP + NF W   ++ GST  F+F  +S Y+ +ATFL  +    LP    RI L
Sbjct:     8 LTYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYL-SATFLLRYTVDSLPTLGPRI-L 65

Query:    64 GPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGR 123
              PI A+HSL + L+S+   VG  LS    I  +    R      F   +CFPL  +P G 
Sbjct:    66 KPITAVHSLILFLLSLTMAVGCTLSL---ISSSDPKAR-----LFD-AVCFPLDVKPKGP 116

Query:   124 VFFWSYVFYLSRFLHLLRTFFSILKH--RKLTFFQLFNQSMLICMSFLWLEFSQSFQVVA 181
             +FFW+ VFYLS+ L  + T   IL    ++L+F  +++ + ++ + +LWL   QS   V 
Sbjct:   117 LFFWAQVFYLSKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYLWLRTRQSMFPVG 176

Query:   182 ILLTTLLYSVVYGYRFWTAIGL-PSACFPFXXXXXXXXXXXXXICHFGVLLLHVLKGGCN 240
             ++L + ++ ++YGY F  AIG  P                   +    +L  H    GC 
Sbjct:   177 LVLNSTVHVIMYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAWMLPEHYFGSGCA 236

Query:   241 GIGAWT--FNSVLNAVILLLFMNFYVKMY 267
             GI  WT  FN V  A +L LF NF+ K Y
Sbjct:   237 GI--WTVYFNGVFTASLLALFYNFHSKNY 263

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

DICTYBASE|DDB_G0277569 DDB_G0277569 "GNS1/SUR4 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 70/262 (26%), Positives = 122/262 (46%)

Query:    31 SFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTA 90
             +F+F +I  Y++    + V  N++  +  R  LG I  IH+L + + S V   G  LS  
Sbjct:    63 NFIFMSIFLYLLTVLSIKVLFNVLNIKGWR--LGMISGIHNLILCVWSFVMCAG--LSYD 118

Query:    91 AEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHR 150
               +  TS      H      L C P     +GR+F+W Y++++S+F   + T   +LK R
Sbjct:   119 LLLLFTS----SEH--GINALFCSPESNPLTGRIFYWHYLYFISKFYEFIDTLIIVLKRR 172

Query:   151 KLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACF-- 208
             +L F  +++ ++++ + + WL    ++  V +   TL++  +Y Y F T+I  PS     
Sbjct:   173 ELIFLHIWHHAIVVLIVWTWLP-GVAYASVGMFANTLVHVFMYYYYFRTSIN-PSVRIWW 230

Query:   209 -PFXXXXXXXXXXXXXICHFGVLL----LHVLKG----GCNGIGAWTFNSVLNAVILLLF 259
               +             +     LL    L+   G     C G GA+ F  V N + L+LF
Sbjct:   231 KSYLTSGQLFQFSMSFVLAIPFLLQDISLNQTTGKFNHSCKGWGAFGFTMVNNLIFLILF 290

Query:   260 MNFYVKMYLRNKKIGDASSAAE 281
             +NFY++ Y+  K    + S +E
Sbjct:   291 INFYIQTYVNRKSSTKSKSKSE 312

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0272012 DDB_G0272012 "GNS1/SUR4 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 172 (65.6 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 70/279 (25%), Positives = 120/279 (43%)

Query:     8 WLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRR-IPLGPI 66
             W SE    VNF++    +  S +  L + IS Y+V      +F    L RNR+   L  +
Sbjct:    30 W-SELFDPVNFKFKFGTTPFSQFQILPSVISLYLVI-----IFSIKFLMRNRKPFSLKYV 83

Query:    67 PAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFF 126
               +H+  + + S+V  VGIL              +R       + +C  +     G  ++
Sbjct:    84 SILHNAILCIWSLVMCVGILYEVI----------KRITAEGPLFTVCETVSGFDKGPAYY 133

Query:   127 WSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVVAILLTT 186
             WSY+FY+S+F  LL T   +LK + L F  +++  +++ + + ++    + Q+  + L T
Sbjct:   134 WSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCIVVWLCWYFMYSGWNLQLWVVFLNT 193

Query:   187 LLYSVVYGYRFWTAIGLPSACFPFXXXXXXXXXXXXXICHFGVL-LLHVLKGGCNGIGAW 245
              ++  +Y + F T  G       +             IC  G+  LLH      N    +
Sbjct:   194 FVHVFMYYFYFQTGRGKTV----WWKKYITMIQIIQFIC-LGIAGLLHSAAINLNSSPCF 248

Query:   246 T----FNS--VLNAVILLLFMNFYVKMYLRNKKIGDASS 278
             T    F S  ++N   L LF  F+VK Y  NK    +S+
Sbjct:   249 THYPAFISAYLINFSFLFLFSQFFVKSY-SNKPTSSSST 286

GO:0016021 "integral to membrane" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0281821 eloB "steroid isomerase" [Dictyostelium discoideum (taxid:44689)]

 Score = 161 (61.7 bits), Expect = 5.9e-10, P = 5.9e-10
 Identities = 59/277 (21%), Positives = 115/277 (41%)

Query:     2 MQNIK-YWLSEHPTVVNFRWNNAQSWGSTWSFLFAAISTYVVAATFLHVF-LNLVLPRNR 59
             M  +K Y ++      NFRW +  +  S++ F F+    YV+      +F L  ++   +
Sbjct:     1 MDIVKNYLIAFDQYTANFRWESGVTPLSSYVFPFSTSVIYVLV-----IFALQAIMKNKK 55

Query:    60 RIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTR 119
              + L     IH++ + ++S     G++ +   +  E           AF  L+C      
Sbjct:    56 GMVLKGFSIIHNINLIILSFSMMSGVMYAAYQQYLEQG---------AFS-LVCEQSSQS 105

Query:   120 PSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSF-Q 178
               GR+ FW Y+FYLS++  L+ T    LK + + F  +F+   ++ +++ WL        
Sbjct:   106 VQGRIGFWIYIFYLSKYYELVDTVILALKKKPIIFLHIFHHMAMVPVTWQWLHDQWLVGS 165

Query:   179 VVAILLTTLLYSVVYGYRFWTAIGLPSACFPFXXXXXXXXXXXXXICHFGVLLLHVLKGG 238
                 L+ + ++ ++Y Y   T +G P  C+ F                  V    V++  
Sbjct:   166 WWCTLVNSFIHVLMYYYYLQTTLGNP--CW-FKKYITKAQIVQFLTGTAMVSYWFVIRDS 222

Query:   239 --CNG-IGAWTFNSVLNAVILLLFMNFYVKMYLRNKK 272
               C   +     ++ +N+  ++LF  FY   Y  N +
Sbjct:   223 EKCQAPLSPAIVSNTINSFFIILFGKFYYDSYKSNSR 259

GO:0016021 "integral to membrane" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

MGI|MGI:1858960 Elovl2 "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2" [Mus musculus (taxid:10090)]

 Score = 146 (56.5 bits), Expect = 5.9e-08, P = 5.9e-08
 Identities = 64/270 (23%), Positives = 114/270 (42%)

Query:    30 WSFLFAAISTYVVAATFL-HVFLNLVLPRNR-RIPLGPIPAIHSLAITLISVVTFVGILL 87
             W  L + + T+++  T+L  ++L     +NR  + L  I  +++LAITL+S    V ++L
Sbjct:    29 WFLLDSYLPTFILTITYLLSIWLGNKYMKNRPALSLRGILTLYNLAITLLSAYMLVELIL 88

Query:    88 STAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSIL 147
             S          SW   +    Q L     G     +V +W   +Y S+ +  L T F +L
Sbjct:    89 S----------SWEGGYNLQCQNLDSAGEGDVRVAKVLWW---YYFSKLVEFLDTIFFVL 135

Query:   148 KHR--KLTFFQLFNQSMLI----CMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAI 201
             + +  ++TF  +++ + +     C+   W+   QSF      L + ++ ++Y Y      
Sbjct:   136 RKKTNQITFLHVYHHASMFNIWWCV-LNWIPCGQSF--FGPTLNSFIHILMYSY-----Y 187

Query:   202 GLPSACFPFXXXXX--XXXXXXXXICHFGVLLLHVLKG---GCN-GIGAWTFNSVLNAVI 255
             GL  + FP                +  F + + H L      C    G   F S     +
Sbjct:   188 GL--SVFPSMHKYLWWKKYLTQAQLVQFVLTITHTLSAVVKPCGFPFGCLIFQSSYMMTL 245

Query:   256 LLLFMNFYVKMYLRNKKIGDASSAAEQSNG 285
             ++LF+NFY++ Y R K +       E  NG
Sbjct:   246 VILFLNFYIQTY-RKKPVKKELQEKEVKNG 274

GO:0000038 "very long-chain fatty acid metabolic process" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0009922 "fatty acid elongase activity" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IDA

GO:0034626 "fatty acid elongation, polyunsaturated fatty acid" evidence=ISO;IMP;IDA

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=ISO;IMP;IDA

SGD|S000000630 FEN1 "Fatty acid elongase, involved in sphingolipid biosynthesis" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 138 (53.6 bits), Expect = 7.9e-07, P = 7.9e-07
 Identities = 72/301 (23%), Positives = 126/301 (41%)

Query:     4 NIKYWLSEHPTVVNFRWNNAQSWGSTWSFLFAAI--ST-----YVVAATFLHVFLN-LVL 55
             NI  W  EH   V  R  N +   S + F+   +  ST     Y + A ++ +F    +L
Sbjct:    32 NISLW--EHFDDVVTRVTNGRFVPSEFQFIAGELPLSTLPPVLYAITAYYVIIFGGRFLL 89

Query:    56 PRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQWLLCFP 115
              +++   L  +  +H+L +T +S+ T + +++     I          H   F   +C  
Sbjct:    90 SKSKPFKLNGLFQLHNLVLTSLSL-TLLLLMVEQLVPIIVQ-------HGLYFA--IC-N 138

Query:   116 LGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQ 175
             +G      V  + Y+ Y+ +F+  + TFF +LKH+KLTF   ++      + +  L  + 
Sbjct:   139 IGAWTQPLVTLY-YMNYIVKFIEFIDTFFLVLKHKKLTFLHTYHHGATALLCYTQLMGTT 197

Query:   176 SFQVVAILLTTLLYSVVYGYRFWTAIGLPS------ACFPFXXXXXXXXXXXXXICHFGV 229
             S   V I L   ++ V+Y Y F  A G+          F               +    V
Sbjct:   198 SISWVPISLNLGVHVVMYWYYFLAARGIRVWWKEWVTRFQIIQFVLDIGFIYFAVYQKAV 257

Query:   230 -LLLHVLK--GGCNGIGAWTF-NSVLNAVILLLFMNFYVKMYLRNKKIGDASSAAEQSNG 285
              L   +L   G C G    TF    + +  L+LF++FY+ +Y R  K    S   ++++G
Sbjct:   258 HLYFPILPHCGDCVGSTTATFAGCAIISSYLVLFISFYINVYKR--KGTKTSRVVKRAHG 315

Query:   286 G 286
             G
Sbjct:   316 G 316

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0030497 "fatty acid elongation" evidence=IMP

GO:0016740 "transferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0016020 "membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0009922 "fatty acid elongase activity" evidence=IMP

GO:0016192 "vesicle-mediated transport" evidence=IMP

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IMP

DICTYBASE|DDB_G0292896 eloA "fatty acid elongase ELO" [Dictyostelium discoideum (taxid:44689)]

 Score = 135 (52.6 bits), Expect = 9.5e-07, P = 9.5e-07
 Identities = 56/232 (24%), Positives = 99/232 (42%)

Query:    51 LNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHTTAFQW 110
             L + +   + I L      H+L + L+S++ F+GI++  A       +S+   H      
Sbjct:    52 LQIFMKNKKEIKLHGFAMFHNLFLCLLSLLMFLGIVIPMA------KYSF--PH--GLYN 101

Query:   111 LLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLW 170
             ++C P+    SG V F  Y+FYLS+    + T   +L+ + L F  +++  + + + +  
Sbjct:   102 IICKPID---SGLVQFSYYIFYLSKVYEFIDTIIQVLRKKSLLFLHVWHHFITLWLVWAN 158

Query:   171 LEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPSACFPFXXXXXXXXXXXXXICHFGV- 229
             L++    Q V I     ++ V+Y Y F T  G+     P+             I      
Sbjct:   159 LKYDTGCQWVDISANCFVHIVMYFYYFQTERGIN----PWWKKHITTCQIIQFIVDMSSH 214

Query:   230 LLLHVL--KGGCNG---IGAWTFNSVLNAVILL---LFMNFYVKMYLRNKKI 273
             L  H    +G  N     G W  ++  + VIL    LF+ F+VK Y +   I
Sbjct:   215 LAWHFYDTQGNHNSNYCSGTWATSAFSDFVILSFLGLFIQFFVKAYKKKSSI 266

GO:0034625 "fatty acid elongation, monounsaturated fatty acid" evidence=IDA

GO:0009922 "fatty acid elongase activity" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.40.454.1 hypothetical protein (277 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	295
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	2e-30
PTZ00251	272	PTZ00251, PTZ00251, fatty acid elongase; Provision	4e-04

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score =  114 bits (287), Expect = 2e-30
 Identities = 70/254 (27%), Positives = 107/254 (42%), Gaps = 25/254 (9%)

Query: 28  STWSFLFAAISTYVVAATFLHVFLNLVLPRNRR-IPLGPIPAIHSLAITLISVVTFVGIL 86
           S+   +   I  Y+V        +     RNR+   L  +  +H+L + L+S+  F G+L
Sbjct: 4   SSPWPVILIIVLYLVFVFLGPKIM-----RNRKPFDLKRLLIVHNLFLVLLSLYGFYGLL 58

Query: 87  LSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSI 146
                               A      F  G    G V FW ++F LS+FL LL T F +
Sbjct: 59  AGAGWGRG---------LYLALCVCYSFDPGAIRMGLVGFWYWLF-LSKFLELLDTVFLV 108

Query: 147 L--KHRKLTFFQLFNQS-MLICMSFLWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIG- 202
           L  K R+L+F  +++ + ML+                  LL + ++ ++Y Y F  A+G 
Sbjct: 109 LRKKQRQLSFLHVYHHATMLLYSWLGLKYGPGGHFWFIALLNSFVHVIMYFYYFLAALGA 168

Query: 203 --LPSACFPFVVNCQVVLLVCNLICHFGVLLLHVLKGGCNG--IGAWTFNSVLNAVILLL 258
             LP     ++   Q++  V  L  H G  L +  KGGC G    A     V     L L
Sbjct: 169 RGLPVWWKKYITQLQIIQFVLGLA-HVGYALYNYTKGGCGGPFPKAVRLGLVYYVSYLFL 227

Query: 259 FMNFYVKMYLRNKK 272
           F+NFY+K Y + KK
Sbjct: 228 FLNFYIKSYKKPKK 241

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

>gnl|CDD|140278 PTZ00251, PTZ00251, fatty acid elongase; Provisional

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 12/162 (7%)

Query: 121 SGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQ--SFQ 178
           +G+V     +F +S+      TFF I+  +KL F   F+   +    + W+ + Q  S  
Sbjct: 108 TGKVGVAMGLFSISKVPEFGDTFFLIMGGKKLPFLSWFHHVTIFL--YAWMSYQQGSSIW 165

Query: 179 VVAILLTTLLYSVVYGYRFWTAIGLPSACFPF---VVNCQVVLLVCNLICHFGVLLLHVL 235
           + A  +   ++S++Y Y   +  G      PF   +   Q+  +V  L     V++  + 
Sbjct: 166 ICAAAMNYFVHSIMYFYFALSEAGFKKLVKPFAMYITLLQITQMVGGLFVSGYVIVQKLT 225

Query: 236 KG---GCNGIGAWTFNSVLNAVI--LLLFMNFYVKMYLRNKK 272
           KG   GC+G    T    L   I    LF   +VK Y+  +K
Sbjct: 226 KGDPKGCSGTTMATARGQLMIYIFNFYLFSEMFVKGYVLPRK 267

Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
PTZ00251	272	fatty acid elongase; Provisional	100.0
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	100.0
KOG3071	274	consensus Fatty acyl-CoA elongase/Polyunsaturated	100.0
KOG3072	282	consensus Long chain fatty acid elongase [Lipid tr	100.0

>PTZ00251 fatty acid elongase; Provisional

Probab=100.00  E-value=1e-67  Score=487.32  Aligned_cols=254  Identities=17%  Similarity=0.251  Sum_probs=212.5

Q ss_pred             CCCcccccccCcCCCC-CChHHHHHHHHHHHHHHhhhhhhhccccCCCCCCC-CCChhHHHHHHHHHHHHHHHHHHHHHH
Q 043004           12 HPTVVNFRWNNAQSWG-STWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIP-LGPIPAIHSLAITLISVVTFVGILLST   89 (295)
Q Consensus        12 ~~~~~~F~~~~~~~~m-~~~~~~~~i~~~Yl~~V~~l~~~~~~~M~~Rkp~~-Lk~~l~~~N~~l~~~S~~~~~~~~~~~   89 (295)
                      +-.+.+|+-++.++|+ +||++++.++++|+++|+.++..|+..||+|||++ ||+++++||++|+++|+++++++++..
T Consensus         6 ~~~~~~f~~~~~~~wl~~~~~~~~~i~~~Yl~~V~~Gp~~M~~~~~~Rkp~~~Lr~~l~~yNl~l~v~s~~~~~~~~~~~   85 (272)
T PTZ00251          6 NYGINHYDGHAVQKWLASNVDICVYIAAAYLTFVFKGPQLVDAIFHGNPPVPLIKKCWALWNIGLSVFSMYGVYRVVPPL   85 (272)
T ss_pred             ccccccCCcHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhhccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567899988888887 99999999999999999954444433345799999 999999999999999999999998776


Q ss_pred             HHhhhhccccccccccCCceeeccCCCCCC-CCccchhhHHHHHHHhhhhhhhhHHHHhccCceeeEEEeccchhhhhhh
Q 043004           90 AAEIRETSWSWRRTHTTAFQWLLCFPLGTR-PSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSF  168 (295)
Q Consensus        90 ~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~-~~~~~~~~~~lf~lSK~~El~DTvf~VLrK~~lsFLHvYHH~~~~~~~w  168 (295)
                      +....          +.|+.+..|+..+++ .++++++|+|+|++||++||+||+|+||||||+||||||||++|++++|
T Consensus        86 ~~~~~----------~~g~~~~~C~~~~~~~~~~~~~~~~~~f~lsK~~El~DTvF~VLRKKqvsFLHvYHH~~~~~~~w  155 (272)
T PTZ00251         86 LNNLR----------KYGLHDTLCTFREDEFYTGKVGVAMGLFSISKVPEFGDTFFLIMGGKKLPFLSWFHHVTIFLYAW  155 (272)
T ss_pred             HHHHH----------hcCcceeeecCCCCcchhHHHHHHHHHHHHHHHHHHHhHhhhhhcCCCchHHHHHHHHHHHHHHH
Confidence            54321          257778889865544 3578999999999999999999999999999999999999999999999


Q ss_pred             eeeeeccchhHHHHHHhhHHHHhhhhhHHHhhcCCCC---cccccchhhhhHHHHHHHHHHhhhhhhhc---cCCCCCch
Q 043004          169 LWLEFSQSFQVVAILLTTLLYSVVYGYRFWTAIGLPS---ACFPFVVNCQVVLLVCNLICHFGVLLLHV---LKGGCNGI  242 (295)
Q Consensus       169 ~~~~~~~~~~~~~~~~Ns~VH~iMY~YY~lsa~g~~~---~wk~~IT~lQivQFv~~~~~~~~~~~~~~---~~~~C~~~  242 (295)
                      ..+..+.+...+++++|++||++||+||+++|+|+|+   ||||+||.+||+||+++++++.+.++...   .+++|+++
T Consensus       156 ~~~~~g~~~~~~~~~lNs~VH~iMY~YY~lsa~g~~~~~~~~kk~IT~lQi~Qfv~~~~~~~~~~~~~~~~~~~~~C~~~  235 (272)
T PTZ00251        156 MSYQQGSSIWICAAAMNYFVHSIMYFYFALSEAGFKKLVKPFAMYITLLQITQMVGGLFVSGYVIVQKLTKGDPKGCSGT  235 (272)
T ss_pred             HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCc
Confidence            9886555555567999999999999999999999983   48999999999999999999888876421   13479986


Q ss_pred             H-HHHHH-HHHHHHHHHHHHHHHHHHcccCCCCCC
Q 043004          243 G-AWTFN-SVLNAVILLLFMNFYVKMYLRNKKIGD  275 (295)
Q Consensus       243 ~-~~~~~-~~~~~s~l~LF~~Fy~k~Y~~k~~~~~  275 (295)
                      . ..... .++++||++||+|||+|+|.+|+++++
T Consensus       236 ~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~~~~~~~  270 (272)
T PTZ00251        236 TMATARGQLMIYIFNFYLFSEMFVKGYVLPRKAKA  270 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            5 44444 448899999999999999988755543

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=100.00  E-value=1.3e-66  Score=475.95  Aligned_cols=236  Identities=22%  Similarity=0.414  Sum_probs=205.3

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhhhhhccccCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Q 043004           26 WGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEIRETSWSWRRTHT  105 (295)
Q Consensus        26 ~m~~~~~~~~i~~~Yl~~V~~l~~~~~~~M~~Rkp~~Lk~~l~~~N~~l~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (295)
                      +++||++++.++++|+++|+.+++.    ||+|||++||+++.+||++|+++|++++++++++......          +
T Consensus         2 l~~~~~~~~~~~~~Yl~~V~~g~~~----m~~Rkp~~Lk~~~~~~N~~l~~~S~~~~~~~~~~~~~~~~----------~   67 (250)
T PF01151_consen    2 LMSNPWFPILIVVLYLLFVFLGPRF----MKNRKPFNLKTLIIVYNLFLVVFSAYMFYGILPALFSSLF----------K   67 (250)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH----HhhCCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------h
Confidence            3599999999999999999765544    8999999999999999999999999999999986554321          2


Q ss_pred             CCceeeccC----CCCCCCCccchhhHHHHHHHhhhhhhhhHHHHhccCceeeEEEeccchhhhhhheeeeeccchhHH-
Q 043004          106 TAFQWLLCF----PLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEFSQSFQVV-  180 (295)
Q Consensus       106 ~g~~~~~C~----~~~~~~~~~~~~~~~lf~lSK~~El~DTvf~VLrK~~lsFLHvYHH~~~~~~~w~~~~~~~~~~~~-  180 (295)
                      +|+.+..|+    +++....+++++|.|+|++||++|++||+|+||||||+||||||||++|++++|..++..++++.+ 
T Consensus        68 ~g~~~~~C~~~~~~~~~~~~~~~~~~~~~fylSK~~EllDTvflvLrkK~lsfLHvYHH~~~~~~~w~~~~~~~~~~~~~  147 (250)
T PF01151_consen   68 GGLYSSFCQPVDFDPDSYSSGRVGFWYWLFYLSKYYELLDTVFLVLRKKQLSFLHVYHHASTLLYCWISYKYGPGGQIWF  147 (250)
T ss_pred             cccccccccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHhhhhhhhhhhhheeeeccccchhH
Confidence            588888994    333445678999999999999999999999999999999999999999999999999999666655 


Q ss_pred             HHHHhhHHHHhhhhhHHHhhcCCC---CcccccchhhhhHHHHHHHHHHhhhhhhhcc-CCCC---CchH-HHHHHHHHH
Q 043004          181 AILLTTLLYSVVYGYRFWTAIGLP---SACFPFVVNCQVVLLVCNLICHFGVLLLHVL-KGGC---NGIG-AWTFNSVLN  252 (295)
Q Consensus       181 ~~~~Ns~VH~iMY~YY~lsa~g~~---~~wk~~IT~lQivQFv~~~~~~~~~~~~~~~-~~~C---~~~~-~~~~~~~~~  252 (295)
                      ++++|++||++||+||+++|+|.|   +||||+||.+||+||+++++++.++++.+.. +.+|   ++|. ....+.+++
T Consensus       148 ~~~~N~~VH~iMY~YY~l~a~g~~~~~~~~k~~IT~~Qi~QF~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~  227 (250)
T PF01151_consen  148 IAALNSFVHVIMYSYYFLSALGIRKVPRWWKKYITSLQIVQFVIGIVHTVYALYYYFFPGGDCDTSGYPKFNAILGLVYY  227 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHhHHhhhhhHHHHHHHHHHhheeccCCCCCCcchhHHHHHHHHHHHH
Confidence            779999999999999999999998   4799999999999999999999988876443 3689   5654 455566699


Q ss_pred             HHHHHHHHHHHHHHcccCCCCCC
Q 043004          253 AVILLLFMNFYVKMYLRNKKIGD  275 (295)
Q Consensus       253 ~s~l~LF~~Fy~k~Y~~k~~~~~  275 (295)
                      +|+++||.|||+|+|.+|++|||
T Consensus       228 ~s~l~LF~~Fy~~~Y~~~~~~k~  250 (250)
T PF01151_consen  228 VSYLYLFINFYIKSYIKKKKKKK  250 (250)
T ss_pred             HHHHHHHHHHHHHHhCcCCCCCC
Confidence            99999999999999998877764

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>KOG3071 consensus Fatty acyl-CoA elongase/Polyunsaturated fatty acid specific elongation enzyme [Lipid transport and metabolism]

Probab=100.00  E-value=1.8e-63  Score=455.59  Aligned_cols=254  Identities=31%  Similarity=0.545  Sum_probs=220.8

Q ss_pred             hhhhcCCCcccccccCcC----CCCCChHHHHHHHHHHHHHHhhhhhhhccccCCCCCCCCCChhHHHHHHHHHHHHHHH
Q 043004            7 YWLSEHPTVVNFRWNNAQ----SWGSTWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTF   82 (295)
Q Consensus         7 ~~~~~~~~~~~F~~~~~~----~~m~~~~~~~~i~~~Yl~~V~~l~~~~~~~M~~Rkp~~Lk~~l~~~N~~l~~~S~~~~   82 (295)
                      |+..++|.+.+|+|.+++    +++++++++..++.+|+ +|..+||.   +|+||||++||.++.+||++|++.|++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~v~~~~l~s~~~~~~il~~yl-~v~~~G~~---~m~nrkp~~l~~~~~vyN~~~vl~s~~i~   78 (274)
T KOG3071|consen    3 YPLAEHPLIDNFRWSPDDRVRSPLLSSPWPLLSILLAYL-FVLKLGPK---LMRNRKPLKLRGLSQVYNLGQVLLSAAIF   78 (274)
T ss_pred             chhhhchHHHHhcCCCCccccchhccCcHHHHHHHHHHH-HHHHhcHh---hhccCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            788999999999999886    45799999999999999 77788888   49999999999999999999999999976


Q ss_pred             HHHHHHHHHhhhhccccccccccCCceeeccCCCCCCCCccchhhHHHHHHHhhhhhhhhHHHHhcc--CceeeEEEecc
Q 043004           83 VGILLSTAAEIRETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKH--RKLTFFQLFNQ  160 (295)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~C~~~~~~~~~~~~~~~~lf~lSK~~El~DTvf~VLrK--~~lsFLHvYHH  160 (295)
                      .+........           ...++....|+|.+++.++++.+|+|+||+||+.||+||+|+||||  ||+||||+|||
T Consensus        79 ~~~~~~~~~~-----------~~y~l~c~~~~~~~~~~~~r~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH  147 (274)
T KOG3071|consen   79 LEGELWRWLK-----------TAYNLRCQPCFPSDHEPKLRERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHH  147 (274)
T ss_pred             HHHHHHhhhc-----------cccceEEEecCCCCCCcceeehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEec
Confidence            6555433211           1246677778888888899999999999999999999999999999  99999999999


Q ss_pred             chhhhhhheeeeeccch-hHHHHHHhhHHHHhhhhhHHHhhcCCCC----cccccchhhhhHHHHHHHHHHhhh-hhhhc
Q 043004          161 SMLICMSFLWLEFSQSF-QVVAILLTTLLYSVVYGYRFWTAIGLPS----ACFPFVVNCQVVLLVCNLICHFGV-LLLHV  234 (295)
Q Consensus       161 ~~~~~~~w~~~~~~~~~-~~~~~~~Ns~VH~iMY~YY~lsa~g~~~----~wk~~IT~lQivQFv~~~~~~~~~-~~~~~  234 (295)
                      ++|+..+|.++++.+++ +++.+.+|++||+|||+||+++|+|+++    |||+++|.+|++||++..++..++ ++.  
T Consensus       148 ~~m~~~~~~~l~~~~~g~~~~~~~lNs~VHviMY~YYflsa~G~~v~~~lWWkky~t~vQlvqf~~~~~~~~~~~~~~--  225 (274)
T KOG3071|consen  148 GVMAFLSYLWLKFYGGGHGFFAILLNSFVHVIMYGYYFLSAFGPRVQWYLWWKKYITIVQLVQFLILFVHTLYVHLFK--  225 (274)
T ss_pred             chHHHhhhheeEEeCCceeeeeeehhhhHHHHHHHHHHHHhhCcCccccchHHHHHHHHHHHHHHHHHHHHhheeeec--
Confidence            99999999999998854 5559999999999999999999999996    689999999999999999998887 553  


Q ss_pred             cCCCCCchHH-HHHH-HHHHHHHHHHHHHHHHHHcccCCCCCCcchh
Q 043004          235 LKGGCNGIGA-WTFN-SVLNAVILLLFMNFYVKMYLRNKKIGDASSA  279 (295)
Q Consensus       235 ~~~~C~~~~~-~~~~-~~~~~s~l~LF~~Fy~k~Y~~k~~~~~~~~k  279 (295)
                        ++|..|.+ +++. .+..++|++||+|||+|+|+|+++++.++++
T Consensus       226 --~~c~~~~~~~~~~~~~~~~~~l~LF~nFY~~tY~k~~~~~~~~~~  270 (274)
T KOG3071|consen  226 --PGCCFGIGAWAFNGSVINVSFLLLFSNFYIKTYKKPKKKKAKKKA  270 (274)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhhh
Confidence              68999866 6665 4478899999999999999887666654333

>KOG3072 consensus Long chain fatty acid elongase [Lipid transport and metabolism]

Probab=100.00  E-value=3.3e-62  Score=444.08  Aligned_cols=242  Identities=16%  Similarity=0.259  Sum_probs=217.7

Q ss_pred             cccccccCcCCCC-CChHHHHHHHHHHHHHHhhhhhhhccccCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043004           15 VVNFRWNNAQSWG-STWSFLFAAISTYVVAATFLHVFLNLVLPRNRRIPLGPIPAIHSLAITLISVVTFVGILLSTAAEI   93 (295)
Q Consensus        15 ~~~F~~~~~~~~m-~~~~~~~~i~~~Yl~~V~~l~~~~~~~M~~Rkp~~Lk~~l~~~N~~l~~~S~~~~~~~~~~~~~~~   93 (295)
                      ..+|+.++...+| ++|...+.++++|+++|++++..    |+|||||+|++++.+||.++++||+.+++.+.+..+..+
T Consensus        23 ~~~F~~~~~~~~~~~~~~~si~is~~Y~v~if~~q~f----M~~RkpF~L~~pL~lWn~~La~FSi~g~lr~~~~~~~~~   98 (282)
T KOG3072|consen   23 ETGFDSESVVKFFQEHWPLSIHISIAYLVLIFGGQNF----MKNRKPFQLTKPLNLWNFCLAAFSILGALRTIPEFLAVF   98 (282)
T ss_pred             cCCCchHHHHHHHHhccchhHHHHHHHHHHHHHHHHH----HhcCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3566666667888 88888999999999999998877    899999999999999999999999999999999887664


Q ss_pred             hhccccccccccCCceeeccCCCCCCCCccchhhHHHHHHHhhhhhhhhHHHHhccCceeeEEEeccchhhhhhheeeee
Q 043004           94 RETSWSWRRTHTTAFQWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFSILKHRKLTFFQLFNQSMLICMSFLWLEF  173 (295)
Q Consensus        94 ~~~~~~~~~~~~~g~~~~~C~~~~~~~~~~~~~~~~lf~lSK~~El~DTvf~VLrK~~lsFLHvYHH~~~~~~~w~~~~~  173 (295)
                      +.          +|+..+.|++.+.. .+..++|+|+|.+||..|++||+|+||||||++|||||||+++++++|+++..
T Consensus        99 ~~----------~Gf~~s~C~~~~~~-~~~~~fW~~~fvlSK~~ElgDT~FiVLRKrPliFlHWYHHi~~~iy~~~~y~~  167 (282)
T KOG3072|consen   99 RA----------AGFKGSYCDANNLG-LSVSGFWSWLFVLSKAPELGDTIFIVLRKRPLIFLHWYHHILVLIYAWHSYIE  167 (282)
T ss_pred             Hh----------hhhheeeeecccCC-cchHHHHHHHHHHHhhhhhhceeEEEeccCccEEEechhhheeeeeeeeeccc
Confidence            33          79999999997633 36889999999999999999999999999999999999999999999999999


Q ss_pred             ccchhHHHHHHhhHHHHhhhhhHHHhhcCCCC-cc-cccchhhhhHHHHHHHHHHhhhhhhhccCC-CCCc-hHHHHHHH
Q 043004          174 SQSFQVVAILLTTLLYSVVYGYRFWTAIGLPS-AC-FPFVVNCQVVLLVCNLICHFGVLLLHVLKG-GCNG-IGAWTFNS  249 (295)
Q Consensus       174 ~~~~~~~~~~~Ns~VH~iMY~YY~lsa~g~~~-~w-k~~IT~lQivQFv~~~~~~~~~~~~~~~~~-~C~~-~~~~~~~~  249 (295)
                      ..+.++|++.||.+||++||+||+++|+|+|+ ++ .+.||.+||+||+++...+..+.+.+.+++ .|+. +++..+++
T Consensus       168 ~~a~~rw~i~mNy~vHa~MY~YY~lrsl~ir~Pk~vam~iTtlQi~Qm~i~~~i~~~v~~~~~~~~~~c~~s~~~~~l~~  247 (282)
T KOG3072|consen  168 KVAWGRWFIWMNYLVHAFMYSYYALRSLGIRLPKSVAMAITTLQIVQMVIGCYIGTHVYYVKHTHQLLCQQSYKNLSLCF  247 (282)
T ss_pred             CCcCceEEEEEehhHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHheeeEEEEEEecCCeeeeeeccchhhHH
Confidence            99999999999999999999999999999995 44 899999999999999998887766554433 3997 57888888


Q ss_pred             HHHHHHHHHHHHHHHHHcccCC
Q 043004          250 VLNAVILLLFMNFYVKMYLRNK  271 (295)
Q Consensus       250 ~~~~s~l~LF~~Fy~k~Y~~k~  271 (295)
                      ++|++|++||+|||.++|++|.
T Consensus       248 ~my~syfvLf~~Ff~~aYi~~g  269 (282)
T KOG3072|consen  248 LMYISYFVLFANFFYQAYIKKG  269 (282)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00