Citrus Sinensis ID: 043069

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
HQLIHITLTSLRCSVAILFGNTSHITMSWRGEIETNPHFRPPPNQLERQHSPLPILGAATTTPWYQDHQDQYTQPPRSPVPRAKKQKQRQDRRYWPLGAWSMTPMDQEVRPQPPGGQQQPHGPDQATEPQWKPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR
Secondary Structure (PSIPRED)
ccEEEEEEEEEEEEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEcccccEEEEEEEEEEEEEcccccEEEEEEEEEEEEEccccEEEEEEEcEEEEEEEccEEEEEccccccEEccccEEEEEEEEEEcEEEccHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccccEEEcccEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEcccEEEEEEEcccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccccEEEEEEEEEEEEccccEEEEEEEEEEEEEEEccEEEEccccccccccccccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEcccccccc
Coil and Loop (DISEMBL)
HQLIHITLTSLRCSVAILFgntshitmswrgeietnphfrpppnqlerqhsplpilgaatttpwyqdhqdqytqpprspvprakkqkqrqdrrywplgawsmtpmdqevrpqppggqqqphgpdqatepqwkpqpqwsqatqpkhhgqphgpeaaipplhqdqyhqrnsqgfCAIFWIVIILGGIVVLIVYLLfrphnprfdvssvsLNAAYLDVGVLLNADLNvlanftnpnkkvkvdFSYVVLDLYYgktliasqyvepfsaarrTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCtivlsgppsgvlraskcrtkr
Flexible Loop (DISEMBL)
hqlihitlTSLRCSVAILFGNTSHITMSWRGEIETNPHFRPPPNQLERQHSPLPILGAATTTPWYQDHQDqytqpprspvprakkqkqrqdrrywplgawsmtpMDQEVRPQPPGGQQQPHGPDQATEPQWKPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLanftnpnkkvkvDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKkeidsnavMFQVKGVFRARSDLGTFLRYSYWLYSHCTivlsgppsgvlraskcrtkr
Low Complexity Region (SEG)
HQLIHITLTSLRCSVAILFGNTSHITMSWRGEIETNPHFRPPPNQLERQHSPLPILGAATTTPWYQDHQDQYTQPPRSPVPRAkkqkqrqdrrYWPLGAWSMTPMDQEVRpqppggqqqphgpdqATEPQWKPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFCAIFWiviilggivvlivyllFRPHNPRFDVSSVSLNAAYldvgvllnadlnvlanFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR
Disordered region (IsUnstruct)
**LIHITLTSLRCSVAILFGNTSHITMSWRGEI************************AATTTPWY****************************YWPLGAW********************************************************************SQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSG***************
Disordered Region (DISOPRED)
*QLIHITLTSLRCSVAILFGNTSHITMSWRGEIETN************************************************************************************************************************PPLHQDQYHQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVL**SKCR***
Disordered Region (DISEMBL)
HQLIHITLTSLRCSVAILFGNTSHITMSWRGEIETNPHFRPPPNQLERQHSPLPILGAATTTPWYQD************************RRYWPLGAWSMTPMDQ*******************************************GPEAAIPPLHQDQYHQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSG***********
Disordered Region (DISPRO)
HQLIHITLTSLRCSVAILFGNTSHITMSWRGEIETNPHFRP*****************************************************************************************************************AIPPLH**QYHQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPS*V*R********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
HQLIHITLTSLRCSVAILFGNTSHITMSWRGEIETNPHFRPPPNQLERQHSPLPILGAATTTPWYQDHQDQYTQPPRSPVPRAKKQKQRQDRRYWPLGAWSMTPMDQEVRPQPPGGQQQPHGPDQATEPQWKPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
224110850	387	predicted protein [Populus trichocarpa]	0.908	0.819	0.445	1e-72
255578373	389	conserved hypothetical protein [Ricinus	0.618	0.555	0.552	8e-72
225424623	182	PREDICTED: uncharacterized protein LOC10	0.510	0.978	0.657	3e-65
449435420	353	PREDICTED: uncharacterized protein LOC10	0.507	0.501	0.604	1e-63
449494966	353	PREDICTED: uncharacterized LOC101215018	0.507	0.501	0.604	1e-63
356528436	342	PREDICTED: uncharacterized protein LOC10	0.650	0.663	0.520	3e-57
356511065	347	PREDICTED: uncharacterized protein LOC10	0.510	0.512	0.634	2e-56
297818168	357	hypothetical protein ARALYDRAFT_484398 [	0.616	0.602	0.481	2e-51
15231546	356	uncharacterized protein [Arabidopsis tha	0.613	0.601	0.493	6e-51
116830529	357	unknown [Arabidopsis thaliana]	0.613	0.599	0.493	6e-51

>gi|224110850|ref|XP_002315657.1| predicted protein [Populus trichocarpa] gi|222864697|gb|EEF01828.1| predicted protein [Populus trichocarpa]

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 175/393 (44%), Positives = 218/393 (55%), Gaps = 76/393 (19%)

Query: 27  MSWRGEIETNPHF-RPPPNQLERQHSPLPILGAATTTPWYQDHQDQYTQPPRSPVP---R 82
           MSW    ETNPHF + P  Q E Q S  P      ++      QDQ  QPP+ P+    R
Sbjct: 1   MSW--HPETNPHFIKTPLQQREGQPSQTPPSHGEPSS----GRQDQQNQPPQGPLVTRLR 54

Query: 83  AKKQKQRQD-------------RRYWPLGAW--------SMTPM-DQEVRPQP---PGGQ 117
           +K Q  +++             R  W + A         S  P+ D +V+  P   P  Q
Sbjct: 55  SKGQGSKKNGARVVKTEHEGQLRSPWIIPAQQHPGHHPDSHFPLHDNQVQSPPTQTPQHQ 114

Query: 118 QQPHGPDQATEPQWKPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQ------------YH 165
             PH P      Q    P   +   P+ HG  H  E  +PP + DQ            + 
Sbjct: 115 DHPHFPSHNVTFQSPWVPPLPRGPHPQPHGPKHDSEPHVPPRNHDQDRGPSPRVTLPQHQ 174

Query: 166 QRNSQG-----------------------------FCAIFWIVIILGGIVVLIVYLLFRP 196
           +RN +                              FCAI WIVI LGG++VLIVYL++RP
Sbjct: 175 ERNPRQPPGLVDRPAQFSGLPKPGGTKPLIWLGAVFCAILWIVIFLGGLIVLIVYLVYRP 234

Query: 197 HNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIAS 256
            +PRFDVSS SLN AY+D G LLNADL VLANFTNPNKKV VDFSY+++DLYYG TLIA+
Sbjct: 235 RSPRFDVSSASLNMAYIDAGSLLNADLTVLANFTNPNKKVSVDFSYMIIDLYYGSTLIAT 294

Query: 257 QYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGT 316
           QY+EPFSA R  S   NVH+VTSQVRLP   + +L+++I  N  +F VKGVFR RS LGT
Sbjct: 295 QYIEPFSAERAESRFVNVHMVTSQVRLPVLESARLQEQISKNGAIFDVKGVFRVRSKLGT 354

Query: 317 FLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
            L+YSY LY HCTI+++ PPSGVLRA+KCRTKR
Sbjct: 355 LLKYSYRLYGHCTILVTAPPSGVLRATKCRTKR 387

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578373|ref|XP_002530053.1| conserved hypothetical protein [Ricinus communis] gi|223530469|gb|EEF32353.1| conserved hypothetical protein [Ricinus communis]

 Score =  276 bits (707), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 131/237 (55%), Positives = 173/237 (72%), Gaps = 21/237 (8%)

Query: 134 QPQWSQATQPKHHGQPHGP----EAAIPPLHQDQYHQRNS-----------------QGF 172
           QP  ++ T P+H  + H P    + ++PP HQ+   +++S                   F
Sbjct: 153 QPDSAKVTSPQHQEEDHHPLHPRDPSLPPAHQENCPRQSSGLRTPAPQRTRPITWLAAAF 212

Query: 173 CAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNP 232
           CAIFWIVI LGG++VLIVYL++RP +PRF+VS+VSLNA Y+D G LLNAD+ +LANFTNP
Sbjct: 213 CAIFWIVIFLGGLIVLIVYLVYRPRSPRFEVSNVSLNAVYVDAGSLLNADITLLANFTNP 272

Query: 233 NKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLK 292
           NKKV VDF+++++DLYYG TLIA+QY+E FS AR  S   NVH+VTSQV LP   + QL+
Sbjct: 273 NKKVAVDFNHIIIDLYYGNTLIATQYIESFSTARAQSVFANVHMVTSQVLLPLGESAQLQ 332

Query: 293 KEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
           ++ + N ++F VKGVFR RS+LG+FLRYSY LY HCTI+L+ PPSGVLRA++CRTKR
Sbjct: 333 EQSNKNGIIFNVKGVFRVRSNLGSFLRYSYRLYGHCTIMLTAPPSGVLRATRCRTKR 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424623|ref|XP_002282288.1| PREDICTED: uncharacterized protein LOC100244057, partial [Vitis vinifera]

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 117/178 (65%), Positives = 147/178 (82%)

Query: 172 FCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTN 231
           FC IFW++II+GG+VVLIVY+LFRP +PRFDVSSV+LNAAYLD+G LLNAD+ VLANFTN
Sbjct: 5   FCVIFWVIIIVGGLVVLIVYMLFRPRSPRFDVSSVTLNAAYLDMGYLLNADVTVLANFTN 64

Query: 232 PNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQL 291
           PNKKV VDFSY+V++LYY  TLIAS+ + PFS A R +   +VH+VTSQVRLP   + +L
Sbjct: 65  PNKKVHVDFSYLVVNLYYEDTLIASRAIYPFSVASRQTMFADVHMVTSQVRLPIKDSLKL 124

Query: 292 KKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
            ++I +N + FQ+KG FR RS+LG+FLRYSYWLY  C+IV++ PPSGVL +  CRTKR
Sbjct: 125 SEQIQNNGIEFQLKGYFRTRSNLGSFLRYSYWLYGKCSIVVTAPPSGVLVSRSCRTKR 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435420|ref|XP_004135493.1| PREDICTED: uncharacterized protein LOC101215018 [Cucumis sativus]

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 107/177 (60%), Positives = 148/177 (83%)

Query: 172 FCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTN 231
           FCAIFW+++I+GG+V+LIVYL+FRP +PRFDVS+ +LNAAYLD+G LLNAD+N+LANFTN
Sbjct: 176 FCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVSTANLNAAYLDMGYLLNADVNLLANFTN 235

Query: 232 PNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQL 291
           PNKKV VDFS ++L LYYG TLIA+Q++ PFSA +  S L N+H+V+SQVRLP    ++L
Sbjct: 236 PNKKVSVDFSSMILYLYYGNTLIATQFIAPFSAYKEESMLINIHMVSSQVRLPILERQRL 295

Query: 292 KKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTK 348
           +K+++ + +  ++KG+FRARS+ GT LRYSYW++S+C + + GPP+GVL  S C+TK
Sbjct: 296 QKQLEISGIKLELKGIFRARSNFGTLLRYSYWMHSYCHLFVGGPPTGVLIKSTCKTK 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494966|ref|XP_004159697.1| PREDICTED: uncharacterized LOC101215018 [Cucumis sativus]

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 107/177 (60%), Positives = 148/177 (83%)

Query: 172 FCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTN 231
           FCAIFW+++I+GG+V+LIVYL+FRP +PRFDVS+ +LNAAYLD+G LLNAD+N+LANFTN
Sbjct: 176 FCAIFWVLVIVGGLVILIVYLIFRPKSPRFDVSTANLNAAYLDMGYLLNADVNLLANFTN 235

Query: 232 PNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQL 291
           PNKKV VDFS ++L LYYG TLIA+Q++ PFSA +  S L N+H+V+SQVRLP    ++L
Sbjct: 236 PNKKVSVDFSSMILYLYYGNTLIATQFIAPFSAYKEESMLINIHMVSSQVRLPILERQRL 295

Query: 292 KKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTK 348
           +K+++ + +  ++KG+FRARS+ GT LRYSYW++S+C + + GPP+GVL  S C+TK
Sbjct: 296 QKQLEISGIKLELKGIFRARSNFGTLLRYSYWMHSYCHLFVGGPPTGVLIKSTCKTK 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528436|ref|XP_003532809.1| PREDICTED: uncharacterized protein LOC100819385 [Glycine max]

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/248 (52%), Positives = 172/248 (69%), Gaps = 21/248 (8%)

Query: 121 HGPDQATEPQWKPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYH------------QRN 168
           HG  ++  P+ +P  Q  +  +PK + Q   P A +PP  + Q H            ++ 
Sbjct: 97  HGKQRS--PRRQPTNQGFRPVKPKVNFQEPPPSADVPPEPRQQPHRDPRLSGIKLPKEQK 154

Query: 169 SQ-------GFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNA 221
           SQ         C IFW++II+GG++VLIVYL+FRP +P FDVSSV+LNAAYLD+G LLNA
Sbjct: 155 SQPLTWLGACLCVIFWLIIIIGGLIVLIVYLVFRPQSPHFDVSSVTLNAAYLDLGYLLNA 214

Query: 222 DLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQV 281
           DL +LANFTNPNKKV VDFS V++ LYYG TLIA+QYVEPF+AAR  S    +HLV+SQV
Sbjct: 215 DLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYVEPFNAARLQSRFAYIHLVSSQV 274

Query: 282 RLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLR 341
           +LP   +++L K+++ N V+ +V+GVFRARS LG+ LRYSY LY  C+++L+ PP G+L 
Sbjct: 275 QLPLRESQRLVKQMEGNGVILEVRGVFRARSKLGSILRYSYNLYGRCSVMLTRPPDGILL 334

Query: 342 ASKCRTKR 349
             KCRTKR
Sbjct: 335 KKKCRTKR 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511065|ref|XP_003524252.1| PREDICTED: uncharacterized protein LOC100791466 [Glycine max]

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 113/178 (63%), Positives = 143/178 (80%)

Query: 172 FCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTN 231
            C IFW++II+GG++VLIVY +FRP +P FDVSSV+LNAAYLD+G LLNADL +LANFTN
Sbjct: 170 LCVIFWLIIIIGGLIVLIVYFVFRPQSPHFDVSSVTLNAAYLDLGYLLNADLTMLANFTN 229

Query: 232 PNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQL 291
           PNKKV VDFS V++ LYYG TLIA+QYVEPF AAR  S    +H+V+SQV+LP   +++L
Sbjct: 230 PNKKVHVDFSSVIIYLYYGSTLIATQYVEPFYAARLQSRFAYIHMVSSQVQLPLRESQRL 289

Query: 292 KKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
            K+++ N VM +V+GVFRARS LGT LRYSY LY  C+++L+ PP G+L   KCRTKR
Sbjct: 290 VKQMEGNGVMLEVRGVFRARSKLGTILRYSYNLYGRCSVMLTRPPDGILLKKKCRTKR 347

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297818168|ref|XP_002876967.1| hypothetical protein ARALYDRAFT_484398 [Arabidopsis lyrata subsp. lyrata] gi|297322805|gb|EFH53226.1| hypothetical protein ARALYDRAFT_484398 [Arabidopsis lyrata subsp. lyrata]

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 152/218 (69%), Gaps = 3/218 (1%)

Query: 132 KPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFCAIFWIVIILGGIVVLIVY 191
           KP P W  A  P  H +  G    +PP  +      ++   CAIFW+++ILGG+++LIVY
Sbjct: 143 KPSP-WRTAPTPSPHHR--GGPRLLPPSRETNAMTWSAAFCCAIFWVILILGGLIILIVY 199

Query: 192 LLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGK 251
           L++RP +P  D+S+ +LNAAYLD+G LLN DL +LAN TNP+KK  V+FSYV  +LYY  
Sbjct: 200 LVYRPRSPYMDISAANLNAAYLDMGFLLNGDLTILANVTNPSKKSSVEFSYVTFELYYYN 259

Query: 252 TLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRAR 311
           TLIA+QY+EPF+  ++TS   +VHLV+SQV+L    + +L+++I++  V+  ++G F AR
Sbjct: 260 TLIATQYIEPFNVPKKTSMFASVHLVSSQVQLQPTQSRELQRQIETGPVLLNLRGTFHAR 319

Query: 312 SDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
           S  G   RYSYWL++HC++ L+ PPSG +RA +C TKR
Sbjct: 320 SYFGPLFRYSYWLHTHCSVSLNSPPSGAMRAKRCNTKR 357

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231546|ref|NP_189266.1| uncharacterized protein [Arabidopsis thaliana] gi|9294293|dbj|BAB02195.1| unnamed protein product [Arabidopsis thaliana] gi|91805521|gb|ABE65489.1| unknown [Arabidopsis thaliana] gi|332643627|gb|AEE77148.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 108/219 (49%), Positives = 154/219 (70%), Gaps = 5/219 (2%)

Query: 132 KPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFC-AIFWIVIILGGIVVLIV 190
           KP P W  A  P  H +  GP   +PP  ++      S  FC AIFW+++ILGG+++LIV
Sbjct: 142 KPSP-WRTAPTPSPHHR-RGPR--LPPPSRETNAMTWSAAFCCAIFWVILILGGLIILIV 197

Query: 191 YLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYG 250
           YL++RP +P  D+S+ +LNAAYLD+G LLN DL +LAN TNP+KK  V+FSYV  +LYY 
Sbjct: 198 YLVYRPRSPYVDISAANLNAAYLDMGFLLNGDLTILANVTNPSKKSSVEFSYVTFELYYY 257

Query: 251 KTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRA 310
            TLIA+QY+EPF   ++TS   NVHLV+SQV+L    + +L+++I++  V+  ++G+F A
Sbjct: 258 NTLIATQYIEPFKVPKKTSMFANVHLVSSQVQLQATQSRELQRQIETGPVLLNLRGMFHA 317

Query: 311 RSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
           RS +G   RYSY L++HC++ L+GPP G +RA +C TKR
Sbjct: 318 RSHIGPLFRYSYKLHTHCSVSLNGPPLGAMRARRCNTKR 356

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830529|gb|ABK28222.1| unknown [Arabidopsis thaliana]

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 108/219 (49%), Positives = 154/219 (70%), Gaps = 5/219 (2%)

Query: 132 KPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFC-AIFWIVIILGGIVVLIV 190
           KP P W  A  P  H +  GP   +PP  ++      S  FC AIFW+++ILGG+++LIV
Sbjct: 142 KPSP-WRTAPTPSPHHR-RGPR--LPPPSRETNAMTWSAAFCCAIFWVILILGGLIILIV 197

Query: 191 YLLFRPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYG 250
           YL++RP +P  D+S+ +LNAAYLD+G LLN DL +LAN TNP+KK  V+FSYV  +LYY 
Sbjct: 198 YLVYRPRSPYVDISAANLNAAYLDMGFLLNGDLTILANVTNPSKKSSVEFSYVTFELYYY 257

Query: 251 KTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRA 310
            TLIA+QY+EPF   ++TS   NVHLV+SQV+L    + +L+++I++  V+  ++G+F A
Sbjct: 258 NTLIATQYIEPFKVPKKTSMFANVHLVSSQVQLQATQSRELQRQIETGPVLLNLRGMFHA 317

Query: 311 RSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
           RS +G   RYSY L++HC++ L+GPP G +RA +C TKR
Sbjct: 318 RSHIGPLFRYSYKLHTHCSVSLNGPPLGAMRARRCNTKR 356

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:2031840	317	AT1G13050 "AT1G13050" [Arabido	0.444	0.488	0.419	3.5e-39
TAIR|locus:2131478	268	AT4G26490 "AT4G26490" [Arabido	0.510	0.664	0.290	3.2e-28
TAIR|locus:2161835	283	AT5G56050 "AT5G56050" [Arabido	0.441	0.544	0.329	5.4e-23
TAIR|locus:2161755	119	AT5G56070 "AT5G56070" [Arabido	0.157	0.462	0.285	0.00051

TAIR|locus:2031840 AT1G13050 "AT1G13050" [Arabidopsis thaliana (taxid:3702)]

 Score = 361 (132.1 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
 Identities = 65/155 (41%), Positives = 101/155 (65%)

Query:   195 RPHNPRFDVSSVSLNAAYXXXXXXXXXXXXXXXXFTNPNKKVKVDFSYVVLDLYYGKTLI 254
             RP +P FD+S+ +LN A                 FTNP+KK  VDFSYV+ +LY+  TLI
Sbjct:   163 RPRSPYFDISAATLNTANLDMGYVLNGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLI 222

Query:   255 ASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDL 314
             A++++EPF   +  S  T+ HLV+SQV++    ++ L+ ++ +  V+  ++G F ARS+L
Sbjct:   223 ATEHIEPFIVPKGMSMFTSFHLVSSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNL 282

Query:   315 GTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
             G+ +RYSYWL++ C+I L+ PP+G +RA +C TKR
Sbjct:   283 GSLMRYSYWLHTQCSISLNTPPAGTMRARRCNTKR 317

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006312 "mitotic recombination" evidence=RCA

GO:0009410 "response to xenobiotic stimulus" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0048522 "positive regulation of cellular process" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2131478 AT4G26490 "AT4G26490" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 52/179 (29%), Positives = 95/179 (53%)

Query:   171 GFCAIFWXXXXXXXXXXXXXXXXFRPHNPRFDVSSVSLNAAYXXXXXXXXXXXXXXXXFT 230
             GFC +F                  RP  P FD+ + +L+  Y                FT
Sbjct:    91 GFCFVFSLLLIFFAIATLIVFLAIRPRIPVFDIPNANLHTIYFDTPEFFNGDLSMLVNFT 150

Query:   231 NPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQ 290
             NPNKK++V F  + ++L++   LIA+Q V+PF   +  + L  + L++S V LP     +
Sbjct:   151 NPNKKIEVKFEKLRIELFFFNRLIAAQVVQPFLQKKHETRLEPIRLISSLVGLPVNHAVE 210

Query:   291 LKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
             L++++++N + ++++G F+ ++  G  + YSY L+  C + ++GPP+G+L +  C TK+
Sbjct:   211 LRRQLENNKIEYEIRGTFKVKAHFG-MIHYSYQLHGRCQLQMTGPPTGILISRNCTTKK 268

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2161835 AT5G56050 "AT5G56050" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 51/155 (32%), Positives = 83/155 (53%)

Query:   195 RPHNPRFDVSSVSLNAAYXXXXXXXXXXXXXXXXFTNPNKKVKVDFSYVVLDLYYGKTLI 254
             +P  P FD+S+  LN                   FTNPNKK+ V F  ++++L++  T I
Sbjct:   129 KPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTNPNKKLNVRFENLMVELWFADTKI 188

Query:   255 ASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDL 314
             A+Q V PFS     + L  + L+++ V LP     +L++++ SN + ++++  FR ++  
Sbjct:   189 ATQGVLPFSQRNGKTRLEPIRLISNLVFLPVNHILELRRQVTSNRIAYEIRSNFRVKAIF 248

Query:   315 GTFLRYSYWLYSHCTIVLSGPPSGVLRASKCRTKR 349
             G  + YSY L+  C + LS PP+G L    C TKR
Sbjct:   249 G-MIHYSYMLHGICQLQLSSPPAGGLVYRNCTTKR 282

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2161755 AT5G56070 "AT5G56070" [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00051, P = 0.00051
 Identities = 16/56 (28%), Positives = 34/56 (60%)

Query:   289 EQLKKEIDSNAVMFQVKGVFRARSDLGTFLRYSYWLYSHCTIVLSGPPSGVLRASK 344
             ++ ++++ SN + +++   FR +  +G ++ YSYWL   C + L+ PP+  L + K
Sbjct:    44 QENQRQVTSNMIEYEIISRFRVKVVIG-YINYSYWLKGSCQLQLTSPPADDLLSRK 98


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      349       292   0.00090  115 3  11 22  0.36    34
                                                     33  0.44    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  247 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.90u 0.11s 22.01t   Elapsed:  00:00:01
  Total cpu time:  21.90u 0.11s 22.01t   Elapsed:  00:00:01
  Start:  Tue May 21 04:28:35 2013   End:  Tue May 21 04:28:36 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	349
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	2e-05
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	6e-04
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.003
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.004

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 45.9 bits (109), Expect = 2e-05
 Identities = 26/128 (20%), Positives = 32/128 (25%), Gaps = 15/128 (11%)

Query: 37  PHFRPPPNQLERQHSPLPILGAATTTPWYQDHQDQYTQPPRSPVPRAKKQKQRQDRRYWP 96
           P   PP      Q  P          P       +  QP +     ++   Q       P
Sbjct: 181 PQGMPPRQAAFPQQGPPEQPPG---YPQPPQGHPEQVQPQQFLPAPSQAPAQPPLPPQLP 237

Query: 97  LGAWSMTPMDQEVRPQPPGGQQQPHGPDQATEPQWKPQPQWSQATQPKHHGQPHGPEAAI 156
                         P P    Q P    Q   P  +P  Q  Q  QP+    P       
Sbjct: 238 QQ------------PPPLQQPQFPGLSQQMPPPPPQPPQQQQQPPQPQAQPPPQNQPTPH 285

Query: 157 PPLHQDQY 164
           P L Q Q 
Sbjct: 286 PGLPQGQN 293

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 15/120 (12%)

Query: 160 HQDQYHQRNSQGFCA-IFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYL----- 213
           H  +  +RN    C  I   ++IL   ++++V+ +FR  +P   ++ V++    L     
Sbjct: 27  HLKKTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTT 86

Query: 214 ---DVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSA-ARRTS 269
                 + L AD++V     NPN      +S     +YYG T++      P  A ARRT 
Sbjct: 87  LRPGTNITLIADVSV----KNPN-VASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTM 141

Length = 219

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 6/126 (4%)

Query: 75   PPRSPVPRAKKQKQRQDRRYWPLGAWSMTPMDQEVRPQPPGGQQQPHGPDQATEPQWKPQ 134
            P RSP  +     +   RR     A        E    PP   ++P  P     PQ +PQ
Sbjct: 2867 PSRSPAAKPAAPARPPVRRL----ARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQ 2922

Query: 135  PQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQRNSQGFCAIFWIVIILGGIVVLIVYLLF 194
            P      QP     P  P+  + P            G     W+  ++ G V +  + + 
Sbjct: 2923 PPPPPQPQPPPPPPPR-PQPPLAPTTDPA-GAGEPSGAVPQPWLGALVPGRVAVPRFRVP 2980

Query: 195  RPHNPR 200
            +P   R
Sbjct: 2981 QPAPSR 2986

Length = 3151

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 38.8 bits (90), Expect = 0.004
 Identities = 18/79 (22%), Positives = 25/79 (31%)

Query: 73   TQPPRSPVPRAKKQKQRQDRRYWPLGAWSMTPMDQEVRPQPPGGQQQPHGPDQATEPQWK 132
             +PP   + R    +  +     P              PQP      P  P     P  +
Sbjct: 2879 ARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPR 2938

Query: 133  PQPQWSQATQPKHHGQPHG 151
            PQP  +  T P   G+P G
Sbjct: 2939 PQPPLAPTTDPAGAGEPSG 2957

Length = 3151

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.28
smart00769	100	WHy Water Stress and Hypersensitive response.	98.3
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.59
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	96.52
COG5608	161	LEA14-like dessication related protein [Defense me	96.24
PLN03160	219	uncharacterized protein; Provisional	95.79
KOG3950	292	consensus Gamma/delta sarcoglycan [Cytoskeleton]	80.24

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=6.9e-33  Score=257.71  Aligned_cols=180  Identities=18%  Similarity=0.261  Sum_probs=155.4

Q ss_pred             cccccchhHHHHHHHHHHHHHHHhhheeeecCCCCEEEEEEEEEeeeecCC----CceEeEEEEEEEEEEcCCCeeEEEE
Q 043069          165 HQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPHNPRFDVSSVSLNAAYLDV----GVLLNADLNVLANFTNPNKKVKVDF  240 (349)
Q Consensus       165 ~~r~~~clc~vLlllvlLlGIavLIlwLVlRPk~P~fsV~sasLs~fnvs~----~s~Lna~lsltLtv~NPNkkv~I~Y  240 (349)
                      +++|++||+++++++++++++++.++|++|||++|+|+|++++|++|+++.    ...+|++++++++++|||+ ++|+|
T Consensus        33 r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~Y  111 (219)
T PLN03160         33 RRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFKY  111 (219)
T ss_pred             cccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEEE
Confidence            335666666666666677888888999999999999999999999999865    2467888999999999998 89999


Q ss_pred             cceEEEEEECCEEeeeeccccceecCCCeEEEEEEEEecceecChhhHHHHHhcccCCeEEEEEEEEEEEEEEEeEEEEE
Q 043069          241 SYVVLDLYYGKTLIASQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQVKGVFRARSDLGTFLRY  320 (349)
Q Consensus       241 d~i~a~V~Y~G~~LG~a~vp~F~Qg~rstt~l~v~l~~~~V~L~~~~a~~L~~dl~~G~V~LdV~v~~rvR~kvG~~~s~  320 (349)
                      +++++.++|+|+.+|.+.+|+|+|++++++.+++++......+..  ...|.+|+++|.++|++++++++++++|++.++
T Consensus       112 ~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~--~~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~  189 (219)
T PLN03160        112 SNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS--VPGLLTDISSGLLNMNSYTRIGGKVKILKIIKK  189 (219)
T ss_pred             cCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc--chhHHHHhhCCeEEEEEEEEEEEEEEEEEEEEE
Confidence            999999999999999999999999999999998886544433322  357999999999999999999999999999999


Q ss_pred             EEEEEEEEEEEEeCCCCceEEcccCeeC
Q 043069          321 SYWLYSHCTIVLSGPPSGVLRASKCRTK  348 (349)
Q Consensus       321 ~~~v~V~C~L~V~~p~nGt~~s~~C~~k  348 (349)
                      ++.++++|++.|+. .+.+++++.|+.+
T Consensus       190 ~v~~~v~C~v~V~~-~~~~i~~~~C~~~  216 (219)
T PLN03160        190 HVVVKMNCTMTVNI-TSQAIQGQKCKRH  216 (219)
T ss_pred             EEEEEEEeEEEEEC-CCCEEeccEeccc
Confidence            99999999999986 6778999999976

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.28  E-value=1.4e-11  Score=98.61  Aligned_cols=97  Identities=22%  Similarity=0.307  Sum_probs=72.9

Q ss_pred             EEEEEcCCCeeEEEEcceEEEEEECCEEee-eeccccceecCCCeEEEEEEEEecceecChhhHHHHHhcccCCeEEEEE
Q 043069          226 LANFTNPNKKVKVDFSYVVLDLYYGKTLIA-SQYVEPFSAARRTSWLTNVHLVTSQVRLPFAATEQLKKEIDSNAVMFQV  304 (349)
Q Consensus       226 tLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG-~a~vp~F~Qg~rstt~l~v~l~~~~V~L~~~~a~~L~~dl~~G~V~LdV  304 (349)
                      +|+++|||. ++++|+++++.++|+|..|| ....++|.|++++++.+.+.+..+...+    ...+.+++ +|...+++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-ccccceEE
Confidence            578999999 99999999999999999999 7789999999999998888776555432    55666666 66777888


Q ss_pred             EEEEEEEEEE-eEE--EEEEEEEEEEE
Q 043069          305 KGVFRARSDL-GTF--LRYSYWLYSHC  328 (349)
Q Consensus       305 ~v~~rvR~kv-G~~--~s~~~~v~V~C  328 (349)
                      .+++++++++ +..  .+.+++++..|
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~~  101 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCEC  101 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeEC
Confidence            8888888884 433  34455555554

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.30  E-value=1e-05  Score=66.29  Aligned_cols=88  Identities=15%  Similarity=0.188  Sum_probs=67.1

Q ss_pred             cCCCceEeEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEeeeeccc-cceecCCCeEEEEEEEEecceecChhhHHHH
Q 043069          213 LDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVE-PFSAARRTSWLTNVHLVTSQVRLPFAATEQL  291 (349)
Q Consensus       213 vs~~s~Lna~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~vp-~F~Qg~rstt~l~v~l~~~~V~L~~~~a~~L  291 (349)
                      ....+.++..+.+.+.+.|||. +.+.|+.++..++|+|..+|.+..+ ++..++++++.+.+.+..+ .    .....+
T Consensus         7 ~~~~~~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~-~----~~~~~~   80 (100)
T smart00769        7 WGPVSGLEIEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN-L----FLAEAL   80 (100)
T ss_pred             eccccceEEEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee-h----hHhHHH
Confidence            3334567899999999999998 9999999999999999999999985 7999999988887776552 2    234455


Q ss_pred             HhcccCCe-EEEEEEE
Q 043069          292 KKEIDSNA-VMFQVKG  306 (349)
Q Consensus       292 ~~dl~~G~-V~LdV~v  306 (349)
                      ..++.+|. +++.+++
T Consensus        81 ~~~l~~~~~~~y~l~g   96 (100)
T smart00769       81 IWHIANGEEIPYRLDG   96 (100)
T ss_pred             HHhhccCCCccEEEEE
Confidence            56665553 4444433

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.59  E-value=0.0053  Score=58.45  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=59.1

Q ss_pred             CCCCEEEEEEEEEeeeecCC-CceEeEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEeeeeccccc-eecCCCeEEEE
Q 043069          196 PHNPRFDVSSVSLNAAYLDV-GVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPF-SAARRTSWLTN  273 (349)
Q Consensus       196 Pk~P~fsV~sasLs~fnvs~-~s~Lna~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~vp~F-~Qg~rstt~l~  273 (349)
                      ||.-.++-+++......++. ...+..++.-.|.++|+|. +.|.-.++++.+.|....+|.+..... ..++++.+.+.
T Consensus        98 PRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~  176 (238)
T PF07092_consen   98 PRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNF-YPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVN  176 (238)
T ss_pred             CcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCE-EEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEE
Confidence            77655554444433333333 2467888888999999997 999999999999999999999877655 45777776666


Q ss_pred             EEE
Q 043069          274 VHL  276 (349)
Q Consensus       274 v~l  276 (349)
                      +++
T Consensus       177 ~tV  179 (238)
T PF07092_consen  177 YTV  179 (238)
T ss_pred             EEe
Confidence            654

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=96.52  E-value=0.022  Score=57.54  Aligned_cols=55  Identities=20%  Similarity=0.257  Sum_probs=38.9

Q ss_pred             CCCEEEEEEEEEeeeecCCCceEeEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEee
Q 043069          197 HNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIA  255 (349)
Q Consensus       197 k~P~fsV~sasLs~fnvs~~s~Lna~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG  255 (349)
                      .+|--.|+-+.+++.-.+   .-..-|+|+|.+.|||- +.|..+++++.|+=+..-+|
T Consensus       327 tKpL~~v~v~~I~NVlaS---~qELmfdl~V~A~NPn~-~~V~I~d~dldIFAKS~yvg  381 (387)
T PF12751_consen  327 TKPLTDVQVVSIQNVLAS---EQELMFDLTVEAFNPNW-FTVTIDDMDLDIFAKSRYVG  381 (387)
T ss_pred             CcccccceEEEeeeeeec---cceEEEeeEEEEECCCe-EEEEeccceeeeEecCCccC
Confidence            345555666666664333   23466788899999997 99999999999986654444

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=96.24  E-value=0.15  Score=45.77  Aligned_cols=93  Identities=11%  Similarity=0.139  Sum_probs=67.5

Q ss_pred             CCCEEEEEEEEEeeeecCCCceEeEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEeeeecc-ccceecCCCeEEEEEE
Q 043069          197 HNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYV-EPFSAARRTSWLTNVH  275 (349)
Q Consensus       197 k~P~fsV~sasLs~fnvs~~s~Lna~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~v-p~F~Qg~rstt~l~v~  275 (349)
                      ++|.+.--.+..-...     .....+-.++.++|||. +.|-...++..++-+|..+|.+.. .++..++++...+.+.
T Consensus        31 ~~p~ve~~ka~wGkvt-----~s~~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~  104 (161)
T COG5608          31 KKPGVESMKAKWGKVT-----NSETEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVP  104 (161)
T ss_pred             CCCCceEEEEEEEEEe-----ccceEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEE
Confidence            4566555555555432     23467888899999998 999999999999999999999864 5688899988888887


Q ss_pred             EEecceecChhhHHHHHhcccCCe
Q 043069          276 LVTSQVRLPFAATEQLKKEIDSNA  299 (349)
Q Consensus       276 l~~~~V~L~~~~a~~L~~dl~~G~  299 (349)
                      +..+.-.+    -+.+...+.+|.
T Consensus       105 l~~d~~~~----ke~w~~hi~ngE  124 (161)
T COG5608         105 LRLDNSKI----KEWWVTHIENGE  124 (161)
T ss_pred             EEEehHHH----HHHHHHHhhccC
Confidence            75554322    344555666654

>PLN03160 uncharacterized protein; Provisional

Probab=95.79  E-value=0.25  Score=46.44  Aligned_cols=104  Identities=11%  Similarity=0.097  Sum_probs=65.1

Q ss_pred             CCcCcccccchhHHHHHHHHHHHHHHHhhheeeecCC--CCEEEEEEEEEee-------eecCCC---ceEeEEEEEEEE
Q 043069          161 QDQYHQRNSQGFCAIFWIVIILGGIVVLIVYLLFRPH--NPRFDVSSVSLNA-------AYLDVG---VLLNADLNVLAN  228 (349)
Q Consensus       161 ~~~~~~r~~~clc~vLlllvlLlGIavLIlwLVlRPk--~P~fsV~sasLs~-------fnvs~~---s~Lna~lsltLt  228 (349)
                      ++++..+||+|+|++++++++++++++++++=.=.|+  .-.++|+++.++.       +|++-.   ..-|.|. +.+.
T Consensus        32 ~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~  110 (219)
T PLN03160         32 RRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFK  110 (219)
T ss_pred             ccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEE
Confidence            4555569999999999888888888888777677774  4567777766542       232210   1123444 3454


Q ss_pred             EEcCCCeeEEEEcceEEEEEECCEEeeeeccccceecCCCeEE
Q 043069          229 FTNPNKKVKVDFSYVVLDLYYGKTLIASQYVEPFSAARRTSWL  271 (349)
Q Consensus       229 v~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~vp~F~Qg~rstt~  271 (349)
                      ..  |..+.++|+...+.-    ..+..+.++++.+..-+.+.
T Consensus       111 Y~--~~~~~v~Y~g~~vG~----a~~p~g~~~ar~T~~l~~tv  147 (219)
T PLN03160        111 YS--NTTTTIYYGGTVVGE----ARTPPGKAKARRTMRMNVTV  147 (219)
T ss_pred             Ec--CeEEEEEECCEEEEE----EEcCCcccCCCCeEEEEEEE
Confidence            44  344889998854433    34555666666665555553

>KOG3950 consensus Gamma/delta sarcoglycan [Cytoskeleton]

Probab=80.24  E-value=11  Score=36.47  Aligned_cols=23  Identities=39%  Similarity=0.450  Sum_probs=18.1

Q ss_pred             eEeEEEEEEEEEEcCCCeeEEEE
Q 043069          218 LLNADLNVLANFTNPNKKVKVDF  240 (349)
Q Consensus       218 ~Lna~lsltLtv~NPNkkv~I~Y  240 (349)
                      .+...=+++++++|||.++.-.+
T Consensus       105 ~~~S~rnvtvnarn~~g~v~~~l  127 (292)
T KOG3950|consen  105 YLQSARNVTVNARNPNGKVTGQL  127 (292)
T ss_pred             EEEeccCeeEEccCCCCceeeeE
Confidence            56777789999999999765444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	3e-04

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.7 bits (97), Expect = 3e-04
 Identities = 23/123 (18%), Positives = 31/123 (25%), Gaps = 8/123 (6%)

Query: 48  RQHSPLPILGAATTTPWYQDHQDQYTQPPRSPVPRAKKQKQRQDRRYWPLGAWSMTPMDQ 107
           ++  P   L         Q  Q     PP+ P        Q        +      P   
Sbjct: 6   KRVYPQAQLQYGQNATPLQ--QPAQFMPPQDPAAAGMSYGQM------GMPPQGAVPSMG 57

Query: 108 EVRPQPPGGQQQPHGPDQATEPQWKPQPQWSQATQPKHHGQPHGPEAAIPPLHQDQYHQR 167
           + +   P  +Q     DQAT               P  + QP  P     PL Q Q    
Sbjct: 58  QQQFLTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMA 117

Query: 168 NSQ 170
              
Sbjct: 118 APA 120

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
1yyc_A	174	LEA protein, putative late embryogenesis abundant	97.96
1xo8_A	151	AT1G01470; structural genomics, protein structure	97.66
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	97.61

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=97.96  E-value=8.9e-05  Score=66.11  Aligned_cols=102  Identities=17%  Similarity=0.168  Sum_probs=79.2

Q ss_pred             CCCEEEEEEEEEeeeecCCCceEeEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEeeeeccc-cceecCCCeEEEEEE
Q 043069          197 HNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVE-PFSAARRTSWLTNVH  275 (349)
Q Consensus       197 k~P~fsV~sasLs~fnvs~~s~Lna~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~vp-~F~Qg~rstt~l~v~  275 (349)
                      +.|+++|.++++..++..     .+.+.+.|+++|||. +.|.+..++..+.-+|..|+++..+ ++..++.+++.+.+.
T Consensus        43 ~~PeV~v~~v~~~~~~l~-----~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vp  116 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD-----GVDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVP  116 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS-----SEEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc-----eEEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEE
Confidence            789999999999987554     378899999999998 9999999999999999999999877 578899999998887


Q ss_pred             EEecceecChhhHHHHHhccc-CCeEEEEEEEEEE
Q 043069          276 LVTSQVRLPFAATEQLKKEID-SNAVMFQVKGVFR  309 (349)
Q Consensus       276 l~~~~V~L~~~~a~~L~~dl~-~G~V~LdV~v~~r  309 (349)
                      +....     .....+.+++. .+.++..+++...
T Consensus       117 v~v~~-----~~l~~~~~~l~~~~~i~Y~L~g~L~  146 (174)
T 1yyc_A          117 VKVAY-----SIAVSLMKDMCTDWDIDYQLDIGLT  146 (174)
T ss_dssp             EEESH-----HHHHHTCCCCCSSEEECEEEEEEEE
T ss_pred             EEEEH-----HHHHHHHHhcCCCCccceEEEEEEE
Confidence            64432     22334445553 3456666655443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=97.66  E-value=5.9e-05  Score=65.53  Aligned_cols=102  Identities=12%  Similarity=0.116  Sum_probs=77.0

Q ss_pred             CCCEEEEEEEEEeeeecCCCceEeEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEeeeeccc-cceecCCCeEEEEEE
Q 043069          197 HNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVE-PFSAARRTSWLTNVH  275 (349)
Q Consensus       197 k~P~fsV~sasLs~fnvs~~s~Lna~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~vp-~F~Qg~rstt~l~v~  275 (349)
                      +.|+++|.++++..++.     ....+.+.++++|||. +.+.+..++..+.-+|..|+++..+ ++..++++++.+.+.
T Consensus        20 ~~P~v~v~~v~~~~~~~-----~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vp   93 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR-----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIP   93 (151)
T ss_dssp             CSCCCBCSEEEECCCTT-----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEEC
T ss_pred             CCCEEEEEEeEEeccCc-----ceeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEE
Confidence            57889999988887543     3468899999999998 9999999999999999999999876 688899999988776


Q ss_pred             EEecceecChhhHHHHHhcc-cCCeEEEEEEEEEE
Q 043069          276 LVTSQVRLPFAATEQLKKEI-DSNAVMFQVKGVFR  309 (349)
Q Consensus       276 l~~~~V~L~~~~a~~L~~dl-~~G~V~LdV~v~~r  309 (349)
                      +..+.     .....+.+++ ....++..+++...
T Consensus        94 v~v~~-----~~l~~~~~~l~~~~~i~Y~l~g~l~  123 (151)
T 1xo8_A           94 VVVPY-----SILFNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             CCEEH-----HHHHHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEH-----HHHHHHHHhcccCCcccEEEEEEEE
Confidence            54332     2223333443 34567776666554

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=97.61  E-value=0.00074  Score=57.81  Aligned_cols=65  Identities=15%  Similarity=0.123  Sum_probs=55.7

Q ss_pred             eEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEeeeec-cccceecCCCeEEEEEEEEecceecCh
Q 043069          220 NADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQY-VEPFSAARRTSWLTNVHLVTSQVRLPF  285 (349)
Q Consensus       220 na~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~-vp~F~Qg~rstt~l~v~l~~~~V~L~~  285 (349)
                      .+.|.+.|++.|||. +.+.++.++..|+..|..||.+. ...+..++.+++.+.+.+..+.-.+..
T Consensus        17 ~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~   82 (136)
T 3but_A           17 QTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE   82 (136)
T ss_dssp             EEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred             EEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence            578999999999997 99999999999999999999986 668999999988888877666554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	349
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	97.78

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.78  E-value=9e-06  Score=68.72  Aligned_cols=104  Identities=13%  Similarity=0.141  Sum_probs=76.7

Q ss_pred             cCCCCEEEEEEEEEeeeecCCCceEeEEEEEEEEEEcCCCeeEEEEcceEEEEEECCEEeeeeccc-cceecCCCeEEEE
Q 043069          195 RPHNPRFDVSSVSLNAAYLDVGVLLNADLNVLANFTNPNKKVKVDFSYVVLDLYYGKTLIASQYVE-PFSAARRTSWLTN  273 (349)
Q Consensus       195 RPk~P~fsV~sasLs~fnvs~~s~Lna~lsltLtv~NPNkkv~I~Yd~i~a~V~Y~G~~LG~a~vp-~F~Qg~rstt~l~  273 (349)
                      +=+.|++++.++++.++..+     .+++.+.+++.|||. +++..+.++..++.+|..++++..+ ++..++++++.+.
T Consensus        18 ~~~kPev~l~~v~i~~v~~~-----~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~   91 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD-----SVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALD   91 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT-----EECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEE
T ss_pred             CCCCCeEEEEEEEeeecccc-----eEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEE
Confidence            34579999999999886543     477899999999998 9999999999999999999998766 6788999999887


Q ss_pred             EEEEecceecChhhHHHHHhccc-CCeEEEEEEEEEE
Q 043069          274 VHLVTSQVRLPFAATEQLKKEID-SNAVMFQVKGVFR  309 (349)
Q Consensus       274 v~l~~~~V~L~~~~a~~L~~dl~-~G~V~LdV~v~~r  309 (349)
                      +.+...-     .....+.+++. .+.++.++++...
T Consensus        92 vpv~v~~-----~~l~~~~~~i~~~~~i~Y~l~g~l~  123 (151)
T d1xo8a_          92 IPVVVPY-----SILFNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             ECCCEEH-----HHHHHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEEEH-----HHHHHHHHhhccCCCccEEEEEEEE
Confidence            7653322     22233444443 3456665554444