Citrus Sinensis ID: 043071
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 194 | ||||||
| 255542524 | 232 | conserved hypothetical protein [Ricinus | 0.850 | 0.711 | 0.488 | 6e-40 | |
| 224125366 | 200 | predicted protein [Populus trichocarpa] | 0.798 | 0.775 | 0.524 | 1e-38 | |
| 414881788 | 252 | TPA: hypothetical protein ZEAMMB73_81764 | 0.845 | 0.650 | 0.421 | 4e-31 | |
| 242053571 | 253 | hypothetical protein SORBIDRAFT_03g02742 | 0.871 | 0.667 | 0.410 | 1e-30 | |
| 15240911 | 191 | uncharacterized protein [Arabidopsis tha | 0.721 | 0.732 | 0.470 | 1e-29 | |
| 116830645 | 192 | unknown [Arabidopsis thaliana] | 0.721 | 0.729 | 0.470 | 1e-29 | |
| 413946882 | 227 | hypothetical protein ZEAMMB73_395130 [Ze | 0.860 | 0.735 | 0.422 | 5e-29 | |
| 297812985 | 191 | hypothetical protein ARALYDRAFT_910848 [ | 0.711 | 0.722 | 0.458 | 1e-27 | |
| 115471671 | 262 | Os07g0407900 [Oryza sativa Japonica Grou | 0.835 | 0.618 | 0.407 | 1e-27 | |
| 115436700 | 240 | Os01g0389700 [Oryza sativa Japonica Grou | 0.819 | 0.662 | 0.409 | 1e-26 |
| >gi|255542524|ref|XP_002512325.1| conserved hypothetical protein [Ricinus communis] gi|223548286|gb|EEF49777.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 118/176 (67%), Gaps = 11/176 (6%)
Query: 8 PKAVAKLNCPSAANLANLLPTGTVLAYQALMPSLSNNGTCLAAHKYLSIVALAGCSIVCF 67
P K +AANLANLLPTGTVLA++AL+PS SN+G C AA++YL++ + CS+VCF
Sbjct: 34 PMGRGKTLASTAANLANLLPTGTVLAFEALVPSFSNDGECFAANRYLTLGVIICCSLVCF 93
Query: 68 LSSFTDSYYSSKGKLYYGIATTTGLHIFNKKDSEDEGEKADNNIEDGDKGTEKEGVCLDT 127
LSSFTDS+ GK+YYGIAT GL++FN D D E+ KG +K
Sbjct: 94 LSSFTDSFVGHDGKIYYGIATFKGLYVFNDCDCSDGCG------EEEIKGNKKT-----N 142
Query: 128 YKIRWIDFVHAFTSLLVFLVFATTNSDARRCFFPHPGPNTNVLLMHLPILVGVLQA 183
Y+I IDF+HAF+SL+VFLVFA ++S+ + CFF GPN ++M+LP+ +G+ +
Sbjct: 143 YRITLIDFIHAFSSLIVFLVFAISSSNVQECFFSKAGPNEKQIIMNLPLGIGLFSS 198
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224125366|ref|XP_002319568.1| predicted protein [Populus trichocarpa] gi|222857944|gb|EEE95491.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|414881788|tpg|DAA58919.1| TPA: hypothetical protein ZEAMMB73_817646 [Zea mays] | Back alignment and taxonomy information |
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| >gi|242053571|ref|XP_002455931.1| hypothetical protein SORBIDRAFT_03g027420 [Sorghum bicolor] gi|241927906|gb|EES01051.1| hypothetical protein SORBIDRAFT_03g027420 [Sorghum bicolor] | Back alignment and taxonomy information |
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| >gi|15240911|ref|NP_198089.1| uncharacterized protein [Arabidopsis thaliana] gi|91805667|gb|ABE65562.1| hypothetical protein At5g27370 [Arabidopsis thaliana] gi|332006294|gb|AED93677.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|116830645|gb|ABK28280.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|413946882|gb|AFW79531.1| hypothetical protein ZEAMMB73_395130 [Zea mays] | Back alignment and taxonomy information |
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| >gi|297812985|ref|XP_002874376.1| hypothetical protein ARALYDRAFT_910848 [Arabidopsis lyrata subsp. lyrata] gi|297320213|gb|EFH50635.1| hypothetical protein ARALYDRAFT_910848 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|115471671|ref|NP_001059434.1| Os07g0407900 [Oryza sativa Japonica Group] gi|50510212|dbj|BAD31380.1| unknown protein [Oryza sativa Japonica Group] gi|113610970|dbj|BAF21348.1| Os07g0407900 [Oryza sativa Japonica Group] gi|125599914|gb|EAZ39490.1| hypothetical protein OsJ_23923 [Oryza sativa Japonica Group] gi|215766327|dbj|BAG98555.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|115436700|ref|NP_001043108.1| Os01g0389700 [Oryza sativa Japonica Group] gi|55297216|dbj|BAD68980.1| unknown protein [Oryza sativa Japonica Group] gi|113532639|dbj|BAF05022.1| Os01g0389700 [Oryza sativa Japonica Group] gi|125570498|gb|EAZ12013.1| hypothetical protein OsJ_01895 [Oryza sativa Japonica Group] gi|215766178|dbj|BAG98406.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 194 | ||||||
| TAIR|locus:2146380 | 191 | AT5G27370 "AT5G27370" [Arabido | 0.721 | 0.732 | 0.424 | 1.1e-25 | |
| TAIR|locus:2135952 | 213 | AT4G24310 "AT4G24310" [Arabido | 0.489 | 0.446 | 0.442 | 3.9e-24 | |
| TAIR|locus:505006493 | 213 | AT4G18425 "AT4G18425" [Arabido | 0.448 | 0.408 | 0.397 | 1.8e-22 | |
| TAIR|locus:2161393 | 214 | AT5G46090 "AT5G46090" [Arabido | 0.448 | 0.406 | 0.386 | 6e-22 | |
| TAIR|locus:2089865 | 184 | DMP2 "AT3G21550" [Arabidopsis | 0.432 | 0.456 | 0.380 | 4.1e-21 | |
| TAIR|locus:2076894 | 219 | AT3G02430 "AT3G02430" [Arabido | 0.448 | 0.397 | 0.402 | 1.1e-20 | |
| TAIR|locus:2089915 | 207 | DMP1 "AT3G21520" [Arabidopsis | 0.422 | 0.396 | 0.365 | 2.7e-18 | |
| TAIR|locus:1009023066 | 243 | AT1G09157 "AT1G09157" [Arabido | 0.845 | 0.674 | 0.298 | 7.7e-16 | |
| TAIR|locus:2164850 | 244 | DAU2 "AT5G39650" [Arabidopsis | 0.783 | 0.622 | 0.310 | 1.6e-15 | |
| TAIR|locus:504955516 | 165 | DMP7 "AT4G28485" [Arabidopsis | 0.335 | 0.393 | 0.352 | 3.3e-08 |
| TAIR|locus:2146380 AT5G27370 "AT5G27370" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 65/153 (42%), Positives = 85/153 (55%)
Query: 17 PSAANLANLLPTGTVLAYQALMPSLSNNGTC--LAAHKYLSIVALAGCSIVCFLSSFTDX 74
PSA N ANLLPTGT L ++ L+PS SN G C +K L+I ++ C+ CF SSFTD
Sbjct: 10 PSAGNFANLLPTGTALIFETLLPSFSNGGECNNKPVNKLLTITLISFCAAACFFSSFTDS 69
Query: 75 XXXXXXXXXXXIATTTGLHIFNKKDSEDEGEKADNNIEDGDKGTEKEGVCLDTYKIRWID 134
IAT+ GLHI N D DEG ++ + DK + YK+ ++D
Sbjct: 70 YVGQDGRIYYGIATSNGLHILN--DYPDEGYDPESGLT-ADKR--------ERYKLSFVD 118
Query: 135 FVHAFTSLLVFLVFATTNSDARRCFFPHPGPNT 167
FVHAF S++VFL A +SD RRC P N+
Sbjct: 119 FVHAFVSVIVFLALAVESSDFRRCLLPEDDENS 151
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| TAIR|locus:2135952 AT4G24310 "AT4G24310" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:505006493 AT4G18425 "AT4G18425" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2161393 AT5G46090 "AT5G46090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2089865 DMP2 "AT3G21550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2076894 AT3G02430 "AT3G02430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2089915 DMP1 "AT3G21520" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:1009023066 AT1G09157 "AT1G09157" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2164850 DAU2 "AT5G39650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504955516 DMP7 "AT4G28485" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 194 | |||
| pfam05078 | 169 | pfam05078, DUF679, Protein of unknown function (DU | 2e-62 |
| >gnl|CDD|147322 pfam05078, DUF679, Protein of unknown function (DUF679) | Back alignment and domain information |
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Score = 190 bits (485), Expect = 2e-62
Identities = 76/165 (46%), Positives = 102/165 (61%), Gaps = 14/165 (8%)
Query: 17 PSAANLANLLPTGTVLAYQALMPSLSNNGTCLAAHKYLSIVALAGCSIVCFLSSFTDSYY 76
S ANLA LLPTGTVLA+QAL PS +N+G C AA++ L+ +A C+ CF SFTDSY
Sbjct: 2 SSTANLAKLLPTGTVLAFQALSPSFTNHGECDAANRVLTAALVALCAASCFFFSFTDSYV 61
Query: 77 SSKGKLYYGIATTTGLHIFNKKDSEDEGEKADNNIEDGDKGTEKEGVCLDTYKIRWIDFV 136
GK+YYG+AT GL +FN E G G + L Y++R++DFV
Sbjct: 62 GPDGKVYYGVATPRGLWVFNY--------------EGGRGGGDLPQRDLSRYRLRFLDFV 107
Query: 137 HAFTSLLVFLVFATTNSDARRCFFPHPGPNTNVLLMHLPILVGVL 181
HAF S+LVFL A ++++ CF+P PG T +L +LP+ VGV+
Sbjct: 108 HAFFSVLVFLAVALSDANVVSCFYPGPGEETKEVLTNLPLGVGVV 152
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This family contains several uncharacterized plant proteins. Length = 169 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 194 | |||
| PF05078 | 170 | DUF679: Protein of unknown function (DUF679); Inte | 100.0 |
| >PF05078 DUF679: Protein of unknown function (DUF679); InterPro: IPR007770 This family contains uncharacterised plant proteins of unknown function | Back alignment and domain information |
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Probab=100.00 E-value=1.1e-81 Score=521.80 Aligned_cols=166 Identities=48% Similarity=0.798 Sum_probs=157.5
Q ss_pred hhhHHHHhhhCchhHHHHHHhhccccccCCccccchhHHHHHHHHHhhhhhhcccccceeecCCCcEEEEEEeccceeee
Q 043071 16 CPSAANLANLLPTGTVLAYQALMPSLSNNGTCLAAHKYLSIVALAGCSIVCFLSSFTDSYYSSKGKLYYGIATTTGLHIF 95 (194)
Q Consensus 16 lssta~La~LLPTGTvLaFQ~LsP~fTN~G~C~~~nr~Lt~~Ll~~ca~sCff~sFTDS~~~~dGkvyYG~aT~~Gl~~f 95 (194)
|+++|||+||||||||||||+|+|+|||||+|+++|||||++||++||+||||+||||||+|+|||+|||+||+||||+|
T Consensus 1 ls~ta~La~LLPTGTvlaFq~L~P~~Tn~G~C~~~nr~lt~~Ll~lca~sC~f~sFTDS~~~~dGkvyYG~aT~~Gl~~f 80 (170)
T PF05078_consen 1 LSSTANLAKLLPTGTVLAFQILSPSFTNNGECDTANRWLTAALLALCAASCFFFSFTDSFRGSDGKVYYGFATPRGLWVF 80 (170)
T ss_pred CccHHHHHHhCcchHHHHHHHhhhhcccCCccCcchHHHHHHHHHHHHHHHHHeeecceeECCCCCEEEEEEEcccceec
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccccccccCCCCCCCCCCCCCCCcccccceeeehhhhHHHHHHHHHHHHhccCCCceeeCCCCCCCHHHHHHHhh
Q 043071 96 NKKDSEDEGEKADNNIEDGDKGTEKEGVCLDTYKIRWIDFVHAFTSLLVFLVFATTNSDARRCFFPHPGPNTNVLLMHLP 175 (194)
Q Consensus 96 ~~~~~~~~~e~~~~~~~~g~~~~~~~~~~~~~yrLr~~DfvHA~lS~~VF~avAl~D~~v~~CffP~~~~~~~ell~~lP 175 (194)
|.+++++ ++.+.++++++||||||+|||||++|++||++||++|+|||+||||.+++++||+|+++|
T Consensus 81 ~~~~~~~-------------g~~~~~~~~~~~yrlr~~DfvHA~lS~~VF~aval~d~~v~~Cf~P~~~~~~~~~l~~lP 147 (170)
T PF05078_consen 81 NYPGPEE-------------GGGELKPRDLSKYRLRFIDFVHAFLSVVVFLAVALSDQNVVSCFFPSPSSETKEVLMNLP 147 (170)
T ss_pred CCCCccc-------------cccCCCccccccceEehhhhhHHHHHHHHHHHhheeCCCcceecCCCCchhHHHHHHHhH
Confidence 9875532 123456789999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhheeeecccCCC
Q 043071 176 ILVGVLQASYSCFSPLIGE 194 (194)
Q Consensus 176 l~vG~l~S~vF~iFPt~~~ 194 (194)
++||++||+|||+|||+|.
T Consensus 148 ~~vG~~~S~vF~~FPt~R~ 166 (170)
T PF05078_consen 148 LGVGVLCSMVFMIFPTTRH 166 (170)
T ss_pred HHHHHhHeeEEEECCCCCC
Confidence 9999999999999999984
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00