Citrus Sinensis ID: 043178


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
MVNLLASLEKIKEAEILALIVFAIRSNSRRDEELKIGKTKMKSVMVYFLVRAGISYNHLGNNDCMKLSAQPIIPKAASSPAVMYFEPSEHTNRLHSSSHMNSNSISGQI
cHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccHHHHHccccEEEEccccccccEEEccccccccccccc
ccHHHHHHHHHcHHHHHHHHHHHHHHcccccccEcccHHHHHHHHHHHHHHcccEEEEEccHHHHHHccccccccHHccccEEEEccccccccEEcccccccccccccc
MVNLLASLEKIKEAEILALIVFAIRsnsrrdeeLKIGKTKMKSVMVYFLVRAGIsynhlgnndcmklsaqpiipkaasspavmyfepsehtnrlhssshmnsnsisgqi
MVNLLASLEKIKEAEILALIVfairsnsrrdeelkigktkmksVMVYFLVRAGISYNHLGNNDCMKLSAQPIIPKAASSPAVMYFEPSEHtnrlhssshmnsnsisgqi
MVNLLASLEKIKEAEILALIVFAIRSNSRRDEELKIGKTKMKSVMVYFLVRAGISYNHLGNNDCMKLSAQPIIPKAASSPAVMYFEPSEHTNRLhssshmnsnsisGQI
*****ASLEKIKEAEILALIVFAIRSN******LKIGKTKMKSVMVYFLVRAGISYNHLGNNDCMKLSAQPII************************************
***LLA*LEKIKEAEILALIVFAIRSNSR******IGKTKMKSVMVYFLVRAGISYNHLGNNDCMKLSAQPIIPKAASSPAVMYFEPSEHTNRLHSSSHMNSN******
MVNLLASLEKIKEAEILALIVFAIRSNSRRDEELKIGKTKMKSVMVYFLVRAGISYNHLGNNDCMKLSAQPIIPKAASSPAVMYFEPSE********************
*VNLLASLEKIKEAEILALIVFAIRSNSRRDEELKIGKTKMKSVMVYFLVRAGISYNHLGNNDCMKLSAQPIIPKAASSPAVMYFEPSEHTNRLHS*************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVNLLASLEKIKEAEILALIVFAIRSNSRRDEELKIGKTKMKSVMVYFLVRAGISYNHLGNNDCMKLSAQPIIPKAASSPAVMYFEPSEHTNRLHSSSHMNSNSISGQI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query109 2.2.26 [Sep-21-2011]
Q9LW96 510 Inositol-3-phosphate synt N/A no 0.715 0.152 0.422 9e-10
Q40271 512 Inositol-3-phosphate synt N/A no 0.844 0.179 0.374 2e-09
Q9FPK7 510 Inositol-3-phosphate synt N/A no 0.715 0.152 0.422 2e-09
P42803 510 Inositol-3-phosphate synt N/A no 0.715 0.152 0.422 2e-09
Q9FYV1 510 Inositol-3-phosphate synt N/A no 0.715 0.152 0.412 3e-09
O65195 510 Inositol-3-phosphate synt N/A no 0.715 0.152 0.412 4e-09
P42801 511 Inositol-3-phosphate synt yes no 0.715 0.152 0.412 4e-09
Q96348 510 Inositol-3-phosphate synt N/A no 0.715 0.152 0.402 9e-09
Q9LX12 510 Probable inositol 3-phosp no no 0.715 0.152 0.402 1e-08
Q9SSV4 510 Inositol-3-phosphate synt N/A no 0.697 0.149 0.431 1e-08
>sp|Q9LW96|INO1_TOBAC Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 19/97 (19%)

Query: 16  ILALIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLS 68
           +  LI  AI+ N+    ++ K G+TKMKSV+V FLV AGI      SYNHLGNND M LS
Sbjct: 288 VPGLIDLAIKRNTLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLS 347

Query: 69  AQP-----------IIPKAASSPAVMYFEPSEHTNRL 94
           A             ++    SS A++Y EP EH + +
Sbjct: 348 APQTFRSKEISKSNVVDDMVSSNAILY-EPGEHPDHV 383





Nicotiana tabacum (taxid: 4097)
EC: 5EC: .EC: 5EC: .EC: 1EC: .EC: 4
>sp|Q40271|INO1_MESCR Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1 Back     alignment and function description
>sp|Q9FPK7|INO1_MAIZE Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2 Back     alignment and function description
>sp|P42803|INO1_SPIPO Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYV1|INO1_SESIN Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1 Back     alignment and function description
>sp|O65195|INO1_HORVU Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|P42801|INO1_ARATH Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3 Back     alignment and function description
>sp|Q96348|INO1_BRANA Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2 Back     alignment and function description
>sp|Q9LX12|INO3_ARATH Probable inositol 3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1 Back     alignment and function description
>sp|Q9SSV4|INO1_NICPA Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query109
409194966 510 L-myo-inositol-1-phosphate synthase [Act 0.844 0.180 0.388 1e-08
125531651 259 hypothetical protein OsI_33265 [Oryza sa 0.715 0.301 0.432 1e-08
189169790 510 myo-inositol-3-phosphate synthase [Vigna 0.715 0.152 0.432 2e-08
449451457 510 PREDICTED: inositol-3-phosphate synthase 0.715 0.152 0.432 2e-08
351767989 510 myo-inositol-1-phosphate synthase [Triti 0.715 0.152 0.422 2e-08
167891900 496 myo-inositol 1-phosphate synthase [Phase 0.715 0.157 0.432 2e-08
227270345 510 myo-inositol 1-phosphate synthase [Phase 0.715 0.152 0.432 2e-08
115481722 509 Os10g0369900 [Oryza sativa Japonica Grou 0.715 0.153 0.432 2e-08
223674132 510 myo-inositol phosphate synthase [Phaseol 0.715 0.152 0.432 3e-08
60417544 510 myo-inositol 1-phosphate synthase [Phase 0.715 0.152 0.422 3e-08
>gi|409194966|gb|AFV31635.1| L-myo-inositol-1-phosphate synthase [Actinidia deliciosa] Back     alignment and taxonomy information
 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 65/139 (46%), Gaps = 47/139 (33%)

Query: 1   MVNLLASLEKIKEAEI---------------------------LALIVFAIRSNSR-RDE 32
           M NL ASLEK  EAEI                             LI  AIR NS    +
Sbjct: 247 MENLFASLEK-NEAEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIRRNSLIGGD 305

Query: 33  ELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSAQP-----------IIPK 75
           + K G+TKMKSV+V FLV AGI      SYNHLGNND M L+A             ++  
Sbjct: 306 DFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLTAPQTFRSKEISKSNVVDD 365

Query: 76  AASSPAVMYFEPSEHTNRL 94
             SS A++Y EP EH + +
Sbjct: 366 MVSSNAILY-EPGEHPDHV 383




Source: Actinidia deliciosa

Species: Actinidia deliciosa

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125531651|gb|EAY78216.1| hypothetical protein OsI_33265 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|189169790|gb|ABW99093.2| myo-inositol-3-phosphate synthase [Vigna radiata] Back     alignment and taxonomy information
>gi|449451457|ref|XP_004143478.1| PREDICTED: inositol-3-phosphate synthase-like [Cucumis sativus] gi|449504829|ref|XP_004162306.1| PREDICTED: inositol-3-phosphate synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|351767989|gb|AEQ61648.1| myo-inositol-1-phosphate synthase [Triticum aestivum] Back     alignment and taxonomy information
>gi|167891900|emb|CAQ03497.1| myo-inositol 1-phosphate synthase [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|227270345|emb|CAX94843.1| myo-inositol 1-phosphate synthase [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|115481722|ref|NP_001064454.1| Os10g0369900 [Oryza sativa Japonica Group] gi|20043019|gb|AAM08827.1|AC113335_7 Putative Myo-inositol-1-phosphate synthase (MI-1-P synthase) [Oryza sativa Japonica Group] gi|31431622|gb|AAP53373.1| Inositol-3-phosphate synthase, putative, expressed [Oryza sativa Japonica Group] gi|113639063|dbj|BAF26368.1| Os10g0369900 [Oryza sativa Japonica Group] gi|125531652|gb|EAY78217.1| hypothetical protein OsI_33266 [Oryza sativa Indica Group] gi|125574563|gb|EAZ15847.1| hypothetical protein OsJ_31267 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|223674132|gb|ACN12926.1| myo-inositol phosphate synthase [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|60417544|emb|CAH68559.2| myo-inositol 1-phosphate synthase [Phaseolus vulgaris] gi|70720795|emb|CAJ15162.1| myo inositol 1-phosphate synthase [Phaseolus vulgaris] gi|152205693|emb|CAO78895.1| myoinositol 1-phosphate synthase [Phaseolus vulgaris] gi|152205695|emb|CAO78896.1| myoinositol 1-phosphate synthase [Phaseolus vulgaris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query109
TAIR|locus:2060364 510 MIPS2 "myo-inositol-1-phosphat 0.697 0.149 0.451 6.6e-10
TAIR|locus:2135297 511 MIPS1 "D-myo-Inositol 3-Phosph 0.697 0.148 0.462 4.6e-08
TAIR|locus:2184153 510 MIPS3 "myo-inositol-1-phosphat 0.697 0.149 0.440 2e-07
ASPGD|ASPL0000068586382 AN7625 [Emericella nidulans (t 0.357 0.102 0.555 6.9e-06
UNIPROTKB|Q2NL29 557 ISYNA1 "Inositol-3-phosphate s 0.541 0.105 0.426 9.5e-06
DICTYBASE|DDB_G0285505 511 ino1 "inositol-3-phosphate syn 0.477 0.101 0.491 1.1e-05
SGD|S000003689 533 INO1 "Inositol-3-phosphate syn 0.348 0.071 0.590 1.1e-05
UNIPROTKB|E2RJW5 612 ISYNA1 "Uncharacterized protei 0.366 0.065 0.521 1.8e-05
FB|FBgn0025885 565 Inos "Inos" [Drosophila melano 0.559 0.107 0.471 2e-05
UNIPROTKB|G4N0E3 552 MGG_13185 "Inositol-3-phosphat 0.348 0.068 0.545 5.3e-05
TAIR|locus:2060364 MIPS2 "myo-inositol-1-phosphate synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 129 (50.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
 Identities = 42/93 (45%), Positives = 49/93 (52%)

Query:    19 LIVFAIRSNSR-RDEELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA-Q 70
             LI  AI  N     ++ K G+TKMKSV+V FLV AGI      SYNHLGNND M LSA Q
Sbjct:   291 LIELAISKNCLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQ 350

Query:    71 PIIPKAASSPAVM---------YFEPSEHTNRL 94
                 K  S   V+          FEP EH + +
Sbjct:   351 TFRSKEISKSNVVDDMVASNGILFEPGEHPDHV 383


GO:0000166 "nucleotide binding" evidence=IEA
GO:0004512 "inositol-3-phosphate synthase activity" evidence=IEA;IGI;ISS
GO:0005737 "cytoplasm" evidence=ISM;IDA
GO:0006021 "inositol biosynthetic process" evidence=IEA;ISS
GO:0008654 "phospholipid biosynthetic process" evidence=IEA;ISS
GO:0009733 "response to auxin stimulus" evidence=TAS
GO:0016036 "cellular response to phosphate starvation" evidence=TAS
GO:0009408 "response to heat" evidence=IEP
GO:0009644 "response to high light intensity" evidence=IEP
GO:0042542 "response to hydrogen peroxide" evidence=IEP
GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA;IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0051607 "defense response to virus" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0009793 "embryo development ending in seed dormancy" evidence=IGI
GO:0015996 "chlorophyll catabolic process" evidence=RCA
TAIR|locus:2135297 MIPS1 "D-myo-Inositol 3-Phosphate Synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184153 MIPS3 "myo-inositol-1-phosphate synthase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000068586 AN7625 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q2NL29 ISYNA1 "Inositol-3-phosphate synthase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285505 ino1 "inositol-3-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000003689 INO1 "Inositol-3-phosphate synthase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|E2RJW5 ISYNA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0025885 Inos "Inos" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|G4N0E3 MGG_13185 "Inositol-3-phosphate synthase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query109
PLN02438 510 PLN02438, PLN02438, inositol-3-phosphate synthase 7e-15
pfam07994389 pfam07994, NAD_binding_5, Myo-inositol-1-phosphate 2e-06
pfam01658108 pfam01658, Inos-1-P_synth, Myo-inositol-1-phosphat 2e-05
>gnl|CDD|178057 PLN02438, PLN02438, inositol-3-phosphate synthase Back     alignment and domain information
 Score = 68.6 bits (168), Expect = 7e-15
 Identities = 54/134 (40%), Positives = 64/134 (47%), Gaps = 45/134 (33%)

Query: 1   MVNLLASLEKIKEAEI-------LA--------------------LIVFAIRSNSR-RDE 32
           M NLLAS+EK  EAEI       LA                    +I  A++ NS    +
Sbjct: 247 MENLLASIEK-DEAEISPSTLYALACILEGVPFINGSPQNTFVPGVIELAVKKNSLIGGD 305

Query: 33  ELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA-QPIIPKAASSPAV--- 82
           + K G+TKMKSV+V FLV AGI      SYNHLGNND M LSA Q    K  S   V   
Sbjct: 306 DFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDD 365

Query: 83  ------MYFEPSEH 90
                 + +EP EH
Sbjct: 366 MVASNSILYEPGEH 379


Length = 510

>gnl|CDD|219688 pfam07994, NAD_binding_5, Myo-inositol-1-phosphate synthase Back     alignment and domain information
>gnl|CDD|145021 pfam01658, Inos-1-P_synth, Myo-inositol-1-phosphate synthase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 109
KOG0693 512 consensus Myo-inositol-1-phosphate synthase [Lipid 100.0
PLN02438 510 inositol-3-phosphate synthase 100.0
TIGR03450351 mycothiol_INO1 inositol 1-phosphate synthase, Acti 99.86
PF01658112 Inos-1-P_synth: Myo-inositol-1-phosphate synthase; 99.78
COG1260362 INO1 Myo-inositol-1-phosphate synthase [Lipid meta 99.62
PF07994295 NAD_binding_5: Myo-inositol-1-phosphate synthase; 98.55
>KOG0693 consensus Myo-inositol-1-phosphate synthase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=4.5e-45  Score=309.37  Aligned_cols=99  Identities=47%  Similarity=0.646  Sum_probs=94.5

Q ss_pred             ChhHHHHHHhcCCCccchHHHHHHH---------------------------hcc-ccCCCCCccccchhhhhHHHHHHh
Q 043178            1 MVNLLASLEKIKEAEILALIVFAIR---------------------------SNS-RRDEELKIGKTKMKSVMVYFLVRA   52 (109)
Q Consensus         1 ~~nl~~al~~~n~~eIsPStlyA~A---------------------------~~v-i~G~DfKtGQTk~KSvL~~~l~~~   52 (109)
                      ||||+++|+. ||.|||||||||+|                           ++| |+|||||+|||||||||||||+++
T Consensus       247 ~enl~~si~~-~~~EisPStifA~AsilEg~~yiNGSPQNTfVPGlielA~~~~vfigGDDfKSGQTK~KSvlvdFLVga  325 (512)
T KOG0693|consen  247 AENLLESIEK-DESEISPSTIFAIASILEGCPYINGSPQNTFVPGLIELAERHNVFIGGDDFKSGQTKMKSVLVDFLVGA  325 (512)
T ss_pred             HHHHHHHHhc-CccccChHHHHHHHHHHcCCCcccCCCccccchhHHHHHHHhCceeccccccccchhHHHHHHHHHhcc
Confidence            5899999999 99999999999999                           889 999999999999999999999999


Q ss_pred             cc------cceecCCCCcccccCC-CCccccccC----------CceeeeCCCCCCceEEEeeecc
Q 043178           53 GI------SYNHLGNNDCMKLSAQ-PIIPKAASS----------PAVMYFEPSEHTNRLHSSSHMN  101 (109)
Q Consensus        53 Gl------SyNhLGNnDG~nLs~p-~f~sKei~~----------~~illy~~~~~pDh~V~i~~~~  101 (109)
                      ||      ||||||||||+|||+| |||||||+|          |.| ||+|+|||||||+|.|+-
T Consensus       326 GiKp~SIvSYNHLGNNDG~NLSap~qFRSKEISKSnVvDDmv~SN~i-Ly~pge~pDH~vVIKYvp  390 (512)
T KOG0693|consen  326 GIKPTSIVSYNHLGNNDGMNLSAPQQFRSKEISKSNVVDDMVASNGI-LYEPGEHPDHCVVIKYVP  390 (512)
T ss_pred             CCCceeEeeeccccCCCcccccchhhhhhhhcchhhhhHHHHhcCCc-ccCCCCCCCeEEEEEecc
Confidence            99      9999999999999999 999999955          456 999999999999999985



>PLN02438 inositol-3-phosphate synthase Back     alignment and domain information
>TIGR03450 mycothiol_INO1 inositol 1-phosphate synthase, Actinobacterial type Back     alignment and domain information
>PF01658 Inos-1-P_synth: Myo-inositol-1-phosphate synthase; InterPro: IPR013021 This is a region of myo-inositol-1-phosphate synthases that is related to the glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Back     alignment and domain information
>COG1260 INO1 Myo-inositol-1-phosphate synthase [Lipid metabolism] Back     alignment and domain information
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query109
1jkf_A 533 Holo 1l-Myo-Inositol-1-Phosphate Synthase Length = 2e-07
1la2_A 533 Structural Analysis Of Saccharomyces Cerevisiae Myo 8e-07
1vko_A 537 Crystal Structure Of Inositol-3-Phosphate Synthase 1e-05
>pdb|1JKF|A Chain A, Holo 1l-Myo-Inositol-1-Phosphate Synthase Length = 533 Back     alignment and structure

Iteration: 1

Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 6/44 (13%) Query: 32 EELKIGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69 ++LK G+TK+KSV+ FLV AGI SYNHLGNND LSA Sbjct: 319 DDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSA 362
>pdb|1LA2|A Chain A, Structural Analysis Of Saccharomyces Cerevisiae Myo- Inositol Phosphate Synthase Length = 533 Back     alignment and structure
>pdb|1VKO|A Chain A, Crystal Structure Of Inositol-3-Phosphate Synthase (Ce21227) From Caenorhabditis Elegans At 2.30 A Resolution Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query109
1vko_A 537 Inositol-3-phosphate synthase; CE21227, structural 100.0
1p1j_A 533 Inositol-3-phosphate synthase; 1L-MYO-inositol 1-p 100.0
3qvs_A392 MIPS, MYO-inositol-1-phosphate synthase (INO1); NA 100.0
1vjp_A394 MYO-inositol-1-phosphate synthase-related protein; 99.97
3cin_A394 MYO-inositol-1-phosphate synthase-related protein; 99.96
1gr0_A367 Inositol-3-phosphate synthase; isomerase, oxidored 99.93
>1vko_A Inositol-3-phosphate synthase; CE21227, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD; 2.30A {Caenorhabditis elegans} SCOP: c.2.1.3 d.81.1.3 Back     alignment and structure
Probab=100.00  E-value=1.2e-36  Score=261.41  Aligned_cols=100  Identities=31%  Similarity=0.457  Sum_probs=94.4

Q ss_pred             ChhHHHHHHhcCCCccchHHHHHHH---------------------------hcc-ccCCCCCccccchhhhhHHHHHHh
Q 043178            1 MVNLLASLEKIKEAEILALIVFAIR---------------------------SNS-RRDEELKIGKTKMKSVMVYFLVRA   52 (109)
Q Consensus         1 ~~nl~~al~~~n~~eIsPStlyA~A---------------------------~~v-i~G~DfKtGQTk~KSvL~~~l~~~   52 (109)
                      +++|++||++ |++||+||++||+|                           +++ |+|||||||||+|||+|||||+.|
T Consensus       265 ~~~L~~ai~~-~~~eisaS~~YA~AAl~aG~~FIN~sP~~~~~P~~~elae~~gvpI~GDD~KSGqT~lksvLa~~l~~R  343 (537)
T 1vko_A          265 ADEIMESIRV-NEDEVSPSNIFAVASILEGAHYINGSPQNTLVPGLIELAERHKVFVGGDDFKSGQTKFKSAFVDFLVSS  343 (537)
T ss_dssp             HHHHHHHHHT-TCSSCCHHHHHHHHHHHTTCEEEECSSSCCCCHHHHHHHHHHTCCEECSCBCCSHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhc-CCccCChHHHHHHHHHhcCCceeecCCcccCCHHHHHHHHHhCCceeccccccCCchhHHHHHHHHHHc
Confidence            3799999999 99999999999999                           889 999999999999999999999999


Q ss_pred             cc------cceecCCCCcccccCC-CCccccccCCcee---------eeCCCCCCceEEEeeecc
Q 043178           53 GI------SYNHLGNNDCMKLSAQ-PIIPKAASSPAVM---------YFEPSEHTNRLHSSSHMN  101 (109)
Q Consensus        53 Gl------SyNhLGNnDG~nLs~p-~f~sKei~~~~il---------ly~~~~~pDh~V~i~~~~  101 (109)
                      ||      |||||||+||+||++| +|+|||++|.+++         ||+|+++|||+|+|+|+-
T Consensus       344 Glkv~~~~s~NilGN~Dg~NL~~p~~~~SKeiSKs~vV~dil~~~~~lY~~G~~~dh~V~IdYVP  408 (537)
T 1vko_A          344 GMKPESIVSYNHLGNNDGKNLSEARQFRSKEISKSSVVDDMVKSNQILFPDAKNPDYCVVIKYVP  408 (537)
T ss_dssp             TCEEEEEEEEEEECSHHHHHTTSHHHHHHHHHHHHTTTHHHHHHCTTTCTTCCCCEEEECCEECG
T ss_pred             CCceeEEEEEEeccCcchhhhCCHhhhhhhhhHHHHHHHHHhccCcccccCCCCCCCceEEeecC
Confidence            99      9999999999999999 9999999777544         799999999999999974



>1p1j_A Inositol-3-phosphate synthase; 1L-MYO-inositol 1-phosphate, NADH, isomerase, rossmann fold; HET: NAI; 1.70A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.3 PDB: 1jkf_A* 1la2_A* 1p1f_A 1jki_A* 1p1i_A* 1p1h_A* 1p1k_A* 1rm0_A* Back     alignment and structure
>3qvs_A MIPS, MYO-inositol-1-phosphate synthase (INO1); NAD binding rossmann fold, L-MYO-inositol 1-phosphate syntha isomerase; HET: NAD PG4; 1.70A {Archaeoglobus fulgidus} PDB: 1u1i_A* 3qvt_A* 3qvw_A* 3qvx_A* 3qw2_A* Back     alignment and structure
>1vjp_A MYO-inositol-1-phosphate synthase-related protein; TM1419, structural genomics, JCSG, PSI, protein structure initiative; HET: NAD; 1.70A {Thermotoga maritima} PDB: 3cin_A* Back     alignment and structure
>3cin_A MYO-inositol-1-phosphate synthase-related protein; structura genomics, joint center for structural genomics, JCSG; HET: NAD; 1.70A {Thermotoga maritima MSB8} Back     alignment and structure
>1gr0_A Inositol-3-phosphate synthase; isomerase, oxidoreductase, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: NAD; 1.95A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 109
d1p1ja2115 d.81.1.3 (A:323-437) Myo-inositol 1-phosphate synt 4e-05
d1vkoa2114 d.81.1.3 (A:315-428) Myo-inositol 1-phosphate synt 5e-05
d1gr0a2111 d.81.1.3 (A:201-311) Myo-inositol 1-phosphate synt 0.001
d1vjpa2107 d.81.1.3 (A:210-316) Hypothetical protein TM1419 { 0.002
d1u1ia2105 d.81.1.3 (A:228-332) Myo-inositol 1-phosphate synt 0.003
>d1p1ja2 d.81.1.3 (A:323-437) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 115 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: Myo-inositol 1-phosphate synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 Score = 37.5 bits (87), Expect = 4e-05
 Identities = 24/39 (61%), Positives = 27/39 (69%), Gaps = 6/39 (15%)

Query: 37 GKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSA 69
          G+TK+KSV+  FLV AGI      SYNHLGNND   LSA
Sbjct: 2  GQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSA 40


>d1vkoa2 d.81.1.3 (A:315-428) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} Length = 114 Back     information, alignment and structure
>d1gr0a2 d.81.1.3 (A:201-311) Myo-inositol 1-phosphate synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 111 Back     information, alignment and structure
>d1vjpa2 d.81.1.3 (A:210-316) Hypothetical protein TM1419 {Thermotoga maritima [TaxId: 2336]} Length = 107 Back     information, alignment and structure
>d1u1ia2 d.81.1.3 (A:228-332) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]} Length = 105 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query109
d1vkoa2114 Myo-inositol 1-phosphate synthase {Caenorhabditis 99.89
d1p1ja2115 Myo-inositol 1-phosphate synthase {Baker's yeast ( 99.88
d1u1ia2105 Myo-inositol 1-phosphate synthase {Archaeoglobus f 99.83
d1vjpa2107 Hypothetical protein TM1419 {Thermotoga maritima [ 99.78
d1gr0a2111 Myo-inositol 1-phosphate synthase {Mycobacterium t 99.77
d1p1ja1410 Myo-inositol 1-phosphate synthase {Baker's yeast ( 99.71
d1u1ia1287 Myo-inositol 1-phosphate synthase {Archaeoglobus f 99.59
d1vjpa1275 Hypothetical protein TM1419 {Thermotoga maritima [ 99.53
d1vkoa1397 Myo-inositol 1-phosphate synthase {Caenorhabditis 99.17
>d1vkoa2 d.81.1.3 (A:315-428) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Dihydrodipicolinate reductase-like
domain: Myo-inositol 1-phosphate synthase
species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.89  E-value=1.4e-25  Score=159.16  Aligned_cols=66  Identities=38%  Similarity=0.525  Sum_probs=61.9

Q ss_pred             ccccchhhhhHHHHHHhcc------cceecCCCCcccccCC-CCccccccCCcee---------eeCCCCCCceEEEeee
Q 043178           36 IGKTKMKSVMVYFLVRAGI------SYNHLGNNDCMKLSAQ-PIIPKAASSPAVM---------YFEPSEHTNRLHSSSH   99 (109)
Q Consensus        36 tGQTk~KSvL~~~l~~~Gl------SyNhLGNnDG~nLs~p-~f~sKei~~~~il---------ly~~~~~pDh~V~i~~   99 (109)
                      ||||+|||+|||||+.|||      |||||||+||+||++| +|+||+++|.+++         ||+++++|||+|+|+|
T Consensus         1 tGqT~~k~~La~~~~~Rglkv~~~~~~NilGN~Dg~nL~~~~~~~sK~~SK~~~v~~il~~~~~ly~~~~~~~h~~~i~Y   80 (114)
T d1vkoa2           1 SGQTKFKSAFVDFLVSSGMKPESIVSYNHLGNNDGKNLSEARQFRSKEISKSSVVDDMVKSNQILFPDAKNPDYCVVIKY   80 (114)
T ss_dssp             CSHHHHHHHHHHHHHHTTCEEEEEEEEEEECSHHHHHTTSHHHHHHHHHHHHTTTHHHHHHCTTTCTTCCCCEEEECCEE
T ss_pred             CCcchHHHHHHHHHHHcCCcceEEEEEeecCCccchhhCCHHHhhhhHHHHHHHHHHHHccccccccCCCCCceEeeeee
Confidence            7999999999999999999      9999999999999999 9999999887664         6888999999999999


Q ss_pred             cc
Q 043178          100 MN  101 (109)
Q Consensus       100 ~~  101 (109)
                      .-
T Consensus        81 vp   82 (114)
T d1vkoa2          81 VP   82 (114)
T ss_dssp             CG
T ss_pred             cC
Confidence            75



>d1p1ja2 d.81.1.3 (A:323-437) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u1ia2 d.81.1.3 (A:228-332) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1vjpa2 d.81.1.3 (A:210-316) Hypothetical protein TM1419 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gr0a2 d.81.1.3 (A:201-311) Myo-inositol 1-phosphate synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u1ia1 c.2.1.3 (A:1-227,A:333-392) Myo-inositol 1-phosphate synthase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1vjpa1 c.2.1.3 (A:0-209,A:317-381) Hypothetical protein TM1419 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vkoa1 c.2.1.3 (A:11-314,A:429-521) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure