Citrus Sinensis ID: 043209

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHcccccEEccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHcHHHHHHHcccccccEEEEccccccccccHHHHHHHcccccEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHcHHHHHccccEEEEEcccccccccEEEEEHHHccccEccHHHHHHHHHHHHHccccccccccEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHcccccEHHcccccHHHHHHHHHcHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHcccEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
MGSEKCAIANDITeligntpmvyLNNIVDGCKARIAAKLEmmepcssvkDRIAFSMIKDaeekglitpgktvliectsgntgigMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNkiptsfnphqfknpanpkthyettgpeiwegtrgqVDIFVSgigtggtvsgvgnflkkknpeikvygvepaesailnggka
Flexible Loop (DISEMBL)
MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAeekglitpgkTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPtsfnphqfknpanPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKnpeikvygvepaesailnggka
Low Complexity Region (SEG)
MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFvsgigtggtvsgvgNFLKKKNPEIKVYGVEPAESAILNGGKA
Disordered region (IsUnstruct)
*****CAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFN*************YETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGV*************
Disordered Region (DISOPRED)
******A***DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG***
Disordered Region (DISEMBL)
MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA
Disordered Region (DISPRO)
****KCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q9XEA8	325	Cysteine synthase OS=Oryz	yes	no	0.995	0.676	0.686	3e-79
Q43317	325	Cysteine synthase OS=Citr	N/A	no	0.995	0.676	0.672	8e-77
Q00834	325	Cysteine synthase OS=Spin	N/A	no	0.995	0.676	0.663	3e-76
Q9XEA6	321	Cysteine synthase OS=Oryz	no	no	0.963	0.663	0.685	4e-76
P47999	392	Cysteine synthase, chloro	no	no	0.990	0.558	0.662	2e-75
P38076	325	Cysteine synthase OS=Trit	N/A	no	0.968	0.658	0.677	2e-75
F4K5T2	323	Bifunctional cystathionin	no	no	0.981	0.671	0.658	4e-75
O23733	322	Cysteine synthase OS=Bras	N/A	no	0.963	0.661	0.671	5e-75
P31300	374	Cysteine synthase, chloro	N/A	no	0.963	0.569	0.680	6e-75
O81154	325	Cysteine synthase OS=Sola	N/A	no	0.995	0.676	0.65	8e-75

>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1

 Score =  294 bits (752), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 151/220 (68%), Positives = 185/220 (84%)

Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           M     +IA+D+T LIGNTP+VYLN +VDGC+A+IAAKLE+MEPCSSVKDRI +SMI DA
Sbjct: 1   MAESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDA 60

Query: 61  EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           EEKGLITPGK+VLIE TSGNTGIG+A  AAAKGYKLIL MPA MS+E+RIIL+A+GA+L+
Sbjct: 61  EEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELV 120

Query: 121 LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFV 180
           LT+  +G+    +  +EL  K+P S+   QF+NPANPK HYETTGPEIW+ T G+VDI V
Sbjct: 121 LTDPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILV 180

Query: 181 SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           SGIGTGGTV+G G +LK++NPEIK+YGVEP ESAIL+GG+
Sbjct: 181 SGIGTGGTVTGTGKYLKEQNPEIKIYGVEPTESAILSGGR 220

Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 4EC: 7

>sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=1 SV=1

 Score =  286 bits (732), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 148/220 (67%), Positives = 178/220 (80%)

Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           M   K  IA D+TELIGNTP+VYLN +VDGC AR+AAKLEMMEPCSSVKDRI +SMI DA
Sbjct: 1   MADAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDA 60

Query: 61  EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           E KGLITPG++VLIE TSGNTGIG+A  AAAKGY+LI+ MPA MSLE+R IL+A+GA+L+
Sbjct: 61  ENKGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELV 120

Query: 121 LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFV 180
           LT+   G+    +  EE+  K P S+   QF+NPANPK HYETTGPEIW G+ G++D  V
Sbjct: 121 LTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALV 180

Query: 181 SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           SGIGTGGTV+G G +LK++NP IK+YGVEP ESAIL+GGK
Sbjct: 181 SGIGTGGTVTGAGKYLKEQNPNIKLYGVEPVESAILSGGK 220

Produces L-cysteine from O-acetyl-L-serine and hydrogen sulfide. Can also use pyrazole and 3,4-dihydroxypyridine instead of the hydrogen sulfide to produce two plant specific non-protein amino acids beta-pyrazolylalanine and L-mimosine.

Citrullus lanatus (taxid: 3654)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1

 Score =  284 bits (727), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 146/220 (66%), Positives = 180/220 (81%)

Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           M  EK  IA D+TELIG TP+VYLN + DGC AR+AAKLE MEPCSSVKDRI FSMI DA
Sbjct: 1   MVEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDA 60

Query: 61  EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           E+ GLITPG++VLIE TSGNTGIG+A  AAAKGYKLI+ MPA MSLE+R IL+A+GA+LI
Sbjct: 61  EKSGLITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELI 120

Query: 121 LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFV 180
           LT+   G+    +  EE+ +K P S+   QF+NPANPK HYETTGPEIW+GT G++DIFV
Sbjct: 121 LTDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFV 180

Query: 181 SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           SGIGTGGT++G G +LK++NP++K+ G+EP ESA+L+GGK
Sbjct: 181 SGIGTGGTITGAGKYLKEQNPDVKLIGLEPVESAVLSGGK 220

Spinacia oleracea (taxid: 3562)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2

 Score =  284 bits (726), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 146/213 (68%), Positives = 177/213 (83%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+TELIGNTP+VYLN + DGC  R+AAKLE MEPCSSVKDRI +SMI DAEEKGLIT
Sbjct: 5   IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PGK+VLIE TSGNTGIG+A  AAAKGY+L+L MPA MS+E+RIIL+A+GA+LILT+  +G
Sbjct: 65  PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 124

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187
           +    +  EEL  K   SF   QF+NPANPK HYETTGPEIW+GT G+VD  VSGIGTGG
Sbjct: 125 MKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGG 184

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           T++G G +L+++NP+IK+YGVEP ESA+L+GGK
Sbjct: 185 TITGAGRYLREQNPDIKIYGVEPVESAVLSGGK 217

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P47999|CYSKP_ARATH Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2

 Score =  281 bits (720), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/219 (66%), Positives = 177/219 (80%)

Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G E   IA++  +LIG TPMVYLNN+V GC A +AAKLE+MEPC SVKDRI +SMI DAE
Sbjct: 69  GVEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAE 128

Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           EKGLITPGK+VL+E TSGNTGIG+A  AA+KGYKLIL MPA MSLE+R++L+A+GA+L+L
Sbjct: 129 EKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVL 188

Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVS 181
           T    G+    +  EE+L K P S+   QF NPANPK HYETTGPEIWE TRG++DI V+
Sbjct: 189 TEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVA 248

Query: 182 GIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GIGTGGT++GVG F+K++ PE+KV GVEP ESAIL+GGK
Sbjct: 249 GIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSGGK 287

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1

 Score =  281 bits (719), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/214 (67%), Positives = 175/214 (81%)

Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           AIA D+TELIGNTP+VYLN + DGC  R+AAKLE MEPCSSVKDRI +SMI DAEEKG I
Sbjct: 8   AIAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFI 67

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
            PGK+VLIE TSGNTGIG+A  AAAKGY+L+L MPA MS+E+RIIL+A+GA+LILT+  +
Sbjct: 68  VPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLL 127

Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTG 186
           G+    +  EEL  K P S+   QF+N ANPK HYETTGPEIW+GT G++D  VSGIGTG
Sbjct: 128 GMKGAVQKAEELAAKTPNSYILQQFENAANPKIHYETTGPEIWKGTGGKIDGLVSGIGTG 187

Query: 187 GTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GT++G G +L+++NP IK+YGVEP ESAILNGGK
Sbjct: 188 GTITGTGKYLQEQNPNIKLYGVEPTESAILNGGK 221

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|F4K5T2|CGL_ARATH Bifunctional cystathionine gamma-lyase/cysteine synthase OS=Arabidopsis thaliana GN=DES1 PE=1 SV=1

 Score =  280 bits (717), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 143/217 (65%), Positives = 178/217 (82%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           ++  I ND+TELIGNTPMVYLN IVDGC ARIAAKLEMMEPCSS+KDRIA+SMIKDAE+K
Sbjct: 3   DRVLIKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGK+ LIE T GNTGIG+A   A++GYK+IL+MP+ MSLE+RIIL+A GA++ LT+
Sbjct: 63  GLITPGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTD 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
             +GI  +    +E+L+K P  + PHQF NP NP+ HY TTGPEIW  + G+VDI V+G+
Sbjct: 123 ISIGIKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAGV 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GTGGTV+G G FLK+KN +IKV  VEP+ESA+L+GGK
Sbjct: 183 GTGGTVTGTGKFLKEKNKDIKVCVVEPSESAVLSGGK 219

Involved in maintaining Cys homeostasis through the desulfuration of L-cysteine. Probably unable to interact with SAT and to form the decameric Cys synthase complex (CSC) and is therefore not an enzymatically true OASTL protein.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

>sp|O23733|CYSK1_BRAJU Cysteine synthase OS=Brassica juncea PE=2 SV=1

 Score =  280 bits (716), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 143/213 (67%), Positives = 175/213 (82%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+TELIGNTP+VYLNN+ +GC  R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI 
Sbjct: 5   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGLIK 64

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MPA MS+E+RIIL A+G +L+LT+   G
Sbjct: 65  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSVERRIILLAFGVELVLTDPAKG 124

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187
           +       EE+L K P  +   QF+NPANPK HYETTGPEIW+GT G++D FVSGIGTGG
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTDGKIDGFVSGIGTGG 184

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           T++G G +LK++NP +K+YGVEP ESAIL+GGK
Sbjct: 185 TITGAGKYLKEQNPNVKLYGVEPIESAILSGGK 217

Brassica juncea (taxid: 3707)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1

 Score =  280 bits (716), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 145/213 (68%), Positives = 174/213 (81%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+T+LIGNTPMVYLN IV GC A IAAKLE+MEPC SVKDRI FSMI DAEEKGLI+
Sbjct: 67  IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLIS 126

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PGKTVL+E TSGNTGIG+A  AA++GYKLIL MPA MSLE+R+IL+A+GA+L+LT+   G
Sbjct: 127 PGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKG 186

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187
           +       EE+LN  P ++   QF NPANPK HYETTGPEIWE T+G++DI V+GIGTGG
Sbjct: 187 MKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGG 246

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           T+SG G +LK+KNP IK+ GVEP ES +L+GGK
Sbjct: 247 TISGTGRYLKEKNPNIKIIGVEPTESNVLSGGK 279

Capsicum annuum (taxid: 4072)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2 SV=1

 Score =  280 bits (715), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 143/220 (65%), Positives = 177/220 (80%)

Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           M  EK  IA D+TELIGNTP+VYLNN+VDGC AR+AAKLE MEPCSSVKDRI +SMI DA
Sbjct: 1   MAGEKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDA 60

Query: 61  EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           EEKGLI PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MP+ MSLE+RIIL+ + ++L+
Sbjct: 61  EEKGLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELV 120

Query: 121 LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFV 180
           LT+   G+       EE+  K P S+   QF+NPANPK HYETTGPEIW+G+ G+VD   
Sbjct: 121 LTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALA 180

Query: 181 SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           SGIGTGGT++G G +L+++NP +K+YGVEP ESAIL+GGK
Sbjct: 181 SGIGTGGTITGSGKYLREQNPNVKLYGVEPVESAILSGGK 220

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
359487832	342	PREDICTED: cysteine synthase [Vitis vini	0.981	0.634	0.741	6e-84
359487834	323	PREDICTED: cysteine synthase-like [Vitis	0.977	0.668	0.731	2e-80
255542384	256	cysteine synthase, putative [Ricinus com	0.981	0.847	0.718	2e-80
356500108	394	PREDICTED: cysteine synthase, chloroplas	0.986	0.553	0.655	2e-80
356500110	384	PREDICTED: cysteine synthase, chloroplas	0.986	0.567	0.655	3e-80
297808839	324	cysteine synthase [Arabidopsis lyrata su	0.981	0.669	0.658	4e-80
359487838	323	PREDICTED: cysteine synthase-like [Vitis	0.977	0.668	0.726	5e-80
147835129	323	hypothetical protein VITISV_031201 [Viti	0.977	0.668	0.726	6e-80
225451235	325	PREDICTED: cysteine synthase isoform 2 [	0.995	0.676	0.709	8e-80
363814498	324	uncharacterized protein LOC100775420 [Gl	0.995	0.679	0.65	1e-79

>gi|359487832|ref|XP_002275688.2| PREDICTED: cysteine synthase [Vitis vinifera] gi|298204914|emb|CBI34221.3| unnamed protein product [Vitis vinifera]

 Score =  315 bits (808), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 161/217 (74%), Positives = 184/217 (84%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           +K AIA DITELIG TPMVYLN IVDGC ARIAAKLEMMEPCSSVKDRI +SMIKDAE+K
Sbjct: 3   DKSAIAKDITELIGKTPMVYLNKIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIKDAEDK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGKTVLIE TSGNTGIG+A  AA KGYKL++VMPA  SLE+RIIL+A+GA+LI+T+
Sbjct: 63  GLITPGKTVLIEPTSGNTGIGLAFIAAVKGYKLVIVMPASFSLERRIILRAFGAELIITD 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
              G  E+ R +EELL KIP  +   QF+NPANP+ HYETTGPEIWEG+ G+VD  VSGI
Sbjct: 123 PAKGFKEQLRRIEELLKKIPNGYVLQQFENPANPRIHYETTGPEIWEGSGGKVDALVSGI 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GTGGT SG G FLK+KNPEIKVYGVEP ESA+L+GG+
Sbjct: 183 GTGGTASGAGKFLKEKNPEIKVYGVEPVESAVLSGGE 219

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487834|ref|XP_003633659.1| PREDICTED: cysteine synthase-like [Vitis vinifera] gi|298204916|emb|CBI34223.3| unnamed protein product [Vitis vinifera]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 158/216 (73%), Positives = 185/216 (85%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           EKCAIA D+TELIGNTPMVYLNN+VDGC A IAAKLEMMEPCSSVKDRI +SMI DAEEK
Sbjct: 3   EKCAIAKDVTELIGNTPMVYLNNVVDGCVAHIAAKLEMMEPCSSVKDRIGYSMINDAEEK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGKTVLIE TSGNTGIG+A  AAAKGYKLILVMP+ ++LE+++++ A+GA+L LT+
Sbjct: 63  GLITPGKTVLIEPTSGNTGIGLAFIAAAKGYKLILVMPSVVTLERKMVVLAFGAELYLTD 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
              GI   F   EE+L   P  +  +QF+NPANPK HYETTGPEIW+GT G+VDI V+GI
Sbjct: 123 IAKGIQGVFDKAEEILQNTPNGYILNQFENPANPKIHYETTGPEIWKGTGGKVDILVAGI 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219
           GTGGTV+G G+FLK+KNPEIKVYG+EPAESA+LNGG
Sbjct: 183 GTGGTVTGAGHFLKEKNPEIKVYGIEPAESAVLNGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542384|ref|XP_002512255.1| cysteine synthase, putative [Ricinus communis] gi|223548216|gb|EEF49707.1| cysteine synthase, putative [Ricinus communis]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/217 (71%), Positives = 183/217 (84%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           +KCAI  D+TELIGNTPMVYLNNI++GC  RIAAKLE MEPC SVKDRIA+SMIKDAEEK
Sbjct: 3   DKCAIKKDVTELIGNTPMVYLNNILEGCDVRIAAKLENMEPCYSVKDRIAYSMIKDAEEK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGKTVL+E TSGNTGI MA  AAAKGYK+I+VMPAF SLE+RI+L+A+GA+L LT+
Sbjct: 63  GLITPGKTVLVEVTSGNTGIAMASIAAAKGYKIIIVMPAFKSLERRIVLRAFGAELHLTD 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
              G DE  +  EE++   P  +  HQF+NPANPK HYETTGPEIW+ + G+VD  V+GI
Sbjct: 123 PNKGYDEILKKAEEIVKNTPNGYMLHQFENPANPKIHYETTGPEIWKDSGGKVDALVAGI 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GTGGTV+G G FLK+KNP+IKVYGVEPAESA+LNGGK
Sbjct: 183 GTGGTVTGAGKFLKEKNPDIKVYGVEPAESAVLNGGK 219

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500108|ref|XP_003518876.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like isoform 1 [Glycine max]

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/218 (65%), Positives = 177/218 (81%)

Query: 3   SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
           +E   IA+D+T+LIG TPMVYLNNIV G  A IAAKLE+MEPC SVKDRI FSMI DAE+
Sbjct: 72  TEGLNIADDVTQLIGKTPMVYLNNIVKGSVANIAAKLEIMEPCCSVKDRIGFSMINDAEQ 131

Query: 63  KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
           +G ITPGK++L+E TSGNTGIG+A  AA++GYKLIL MPA MSLE+R++L+A+GA+L+LT
Sbjct: 132 RGAITPGKSILVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVLLKAFGAELVLT 191

Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSG 182
           +A  G++   +  EE+L   P S+   QF NP+NPK HYETTGPEIWE TRG++DI V+G
Sbjct: 192 DAAKGMNGAVQKAEEILKSTPNSYMLQQFDNPSNPKVHYETTGPEIWEDTRGKIDILVAG 251

Query: 183 IGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           IGTGGTVSG G FLK++NP+I+V GVEP ES IL GGK
Sbjct: 252 IGTGGTVSGAGQFLKQQNPKIQVIGVEPLESNILTGGK 289

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500110|ref|XP_003518877.1| PREDICTED: cysteine synthase, chloroplastic/chromoplastic-like isoform 2 [Glycine max]

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/218 (65%), Positives = 177/218 (81%)

Query: 3   SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
           +E   IA+D+T+LIG TPMVYLNNIV G  A IAAKLE+MEPC SVKDRI FSMI DAE+
Sbjct: 72  TEGLNIADDVTQLIGKTPMVYLNNIVKGSVANIAAKLEIMEPCCSVKDRIGFSMINDAEQ 131

Query: 63  KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
           +G ITPGK++L+E TSGNTGIG+A  AA++GYKLIL MPA MSLE+R++L+A+GA+L+LT
Sbjct: 132 RGAITPGKSILVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVLLKAFGAELVLT 191

Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSG 182
           +A  G++   +  EE+L   P S+   QF NP+NPK HYETTGPEIWE TRG++DI V+G
Sbjct: 192 DAAKGMNGAVQKAEEILKSTPNSYMLQQFDNPSNPKVHYETTGPEIWEDTRGKIDILVAG 251

Query: 183 IGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           IGTGGTVSG G FLK++NP+I+V GVEP ES IL GGK
Sbjct: 252 IGTGGTVSGAGQFLKQQNPKIQVIGVEPLESNILTGGK 289

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808839|ref|XP_002872303.1| cysteine synthase [Arabidopsis lyrata subsp. lyrata] gi|297318140|gb|EFH48562.1| cysteine synthase [Arabidopsis lyrata subsp. lyrata]

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 143/217 (65%), Positives = 178/217 (82%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           ++C+I ND+TELIGNTPMVYLNN+VDGC ARIAAKLEMMEP SSVKDRIA+SMIKDAEEK
Sbjct: 3   DRCSIKNDVTELIGNTPMVYLNNVVDGCVARIAAKLEMMEPFSSVKDRIAYSMIKDAEEK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGK+ LIE T+GNTGIG+AC  AA+GYK+ILVMP+ MSLE+RIIL+A GA+L L+ 
Sbjct: 63  GLITPGKSTLIEPTAGNTGIGLACVGAARGYKVILVMPSTMSLERRIILKALGAELHLSE 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
             +G+       + +L+K P  + P QF+N ANP+ HY+TTGPEIW  + G+VDI V+G+
Sbjct: 123 QRIGLKGMLEKTDAILSKTPGGYIPQQFENAANPEIHYQTTGPEIWRDSAGKVDILVAGV 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GTGGT SGVG FLK++N +IKV  VEP ES +L+GG+
Sbjct: 183 GTGGTASGVGKFLKEQNKDIKVCVVEPEESPVLSGGQ 219

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487838|ref|XP_003633660.1| PREDICTED: cysteine synthase-like [Vitis vinifera] gi|298204917|emb|CBI34224.3| unnamed protein product [Vitis vinifera]

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 157/216 (72%), Positives = 185/216 (85%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           EKCAIA D+TELIGNTPMVYLNN+VDGC A IAAKLEMMEPCSSVKDRI +SMI DAEEK
Sbjct: 3   EKCAIAKDVTELIGNTPMVYLNNVVDGCVAHIAAKLEMMEPCSSVKDRIGYSMINDAEEK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGKTVLIE TSGNTGIG+A  AAAKGYKLILVMP+ ++LE+++++ A+GA+L LT+
Sbjct: 63  GLITPGKTVLIEPTSGNTGIGLAFIAAAKGYKLILVMPSVVTLERKMVVLAFGAELYLTD 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
              GI   F   +E+L   P  +  +QF+NPANPK HYETTGPEIW+GT G+VDI V+GI
Sbjct: 123 IAKGIQGVFDKADEILQNTPNGYILNQFENPANPKIHYETTGPEIWKGTGGKVDILVAGI 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219
           GTGGTV+G G+FLK+KNPEIKVYG+EPAESA+LNGG
Sbjct: 183 GTGGTVTGAGHFLKEKNPEIKVYGIEPAESAVLNGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147835129|emb|CAN76754.1| hypothetical protein VITISV_031201 [Vitis vinifera]

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 157/216 (72%), Positives = 185/216 (85%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           EKCAIA D+TELIGNTPMVYLNN+VDGC A IAAKLEMMEPCSSVKDRI +SMI DAEEK
Sbjct: 3   EKCAIAKDVTELIGNTPMVYLNNVVDGCVAHIAAKLEMMEPCSSVKDRIGYSMINDAEEK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGKTVLIE TSGNTGIG+A  AAAKGYKLILVMP+ ++LE+++++ A+GA+L LT+
Sbjct: 63  GLITPGKTVLIEPTSGNTGIGLAFIAAAKGYKLILVMPSVVTLERKMVVLAFGAELYLTD 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
              GI   F   +E+L   P  +  +QF+NPANPK HYETTGPEIW+GT G+VDI V+GI
Sbjct: 123 IAKGIQGVFDKADEILQNTPNGYILNQFENPANPKIHYETTGPEIWKGTGGKVDILVAGI 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219
           GTGGTV+G G+FLK+KNPEIKVYG+EPAESA+LNGG
Sbjct: 183 GTGGTVTGAGHFLKEKNPEIKVYGIEPAESAVLNGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451235|ref|XP_002275990.1| PREDICTED: cysteine synthase isoform 2 [Vitis vinifera] gi|225451237|ref|XP_002275940.1| PREDICTED: cysteine synthase isoform 1 [Vitis vinifera] gi|359487829|ref|XP_003633658.1| PREDICTED: cysteine synthase [Vitis vinifera] gi|147819267|emb|CAN75607.1| hypothetical protein VITISV_033255 [Vitis vinifera] gi|298204909|emb|CBI34216.3| unnamed protein product [Vitis vinifera]

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 156/220 (70%), Positives = 184/220 (83%)

Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           M  EKC IA D+TELIG TP+VYLNN+VDGC ARIAAKLEMMEPCSSVKDRI +SMI DA
Sbjct: 1   MAEEKCFIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDA 60

Query: 61  EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           EEKGLITPG++VLIE TSGNTGIG+A  AAAKGYKLI+ MPA MSLE+RIIL+A+GA+L+
Sbjct: 61  EEKGLITPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILRAFGAELV 120

Query: 121 LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFV 180
           LT+   G+    +  EE+L K P S+   QF+NPANPK HYETTGPEIW GT G+VD FV
Sbjct: 121 LTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEIWRGTGGKVDAFV 180

Query: 181 SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           SGIGTGGT++G G FLK++N +IK+YGVEP ESA+L+GGK
Sbjct: 181 SGIGTGGTITGAGKFLKEQNSDIKLYGVEPVESAVLSGGK 220

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814498|ref|NP_001242884.1| uncharacterized protein LOC100775420 [Glycine max] gi|255645072|gb|ACU23035.1| unknown [Glycine max]

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 143/220 (65%), Positives = 179/220 (81%)

Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           M   +CAI  D TEL+GNTPMV+LNNIV GC ARIAAKLE M+ C SVKDRIA SMI+DA
Sbjct: 1   MEEPQCAIKKDATELVGNTPMVFLNNIVVGCVARIAAKLEYMQACCSVKDRIALSMIEDA 60

Query: 61  EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           E+KGLITPGKTVL+E TSGNTGIG+A  AA +GYKL + MP+++SLE++IIL+A+GA++ 
Sbjct: 61  EKKGLITPGKTVLVEYTSGNTGIGLAFIAALRGYKLQVTMPSYVSLERKIILRAFGAEVY 120

Query: 121 LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFV 180
           LT+   GID   +  EELL K P SF  +QF+NPANP  HYETTGPEIW  + G++D  V
Sbjct: 121 LTDPAKGIDGVIQKAEELLAKTPDSFMLNQFENPANPNIHYETTGPEIWRDSGGKIDALV 180

Query: 181 SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           +GIGTGG+++G G FL++KNP+IK+YGVEPAESA+LNGG+
Sbjct: 181 AGIGTGGSIAGAGRFLREKNPDIKLYGVEPAESAVLNGGQ 220

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2143814	323	CYSD2 "cysteine synthase D2" [	0.981	0.671	0.622	1.4e-69
TAIR|locus:2114804	324	CYSD1 "cysteine synthase D1" [	0.995	0.679	0.609	4.9e-69
TAIR|locus:2043964	392	OASB "O-acetylserine (thiol) l	0.990	0.558	0.611	8e-69
TAIR|locus:2143754	323	DES1 "L-cysteine desulfhydrase	0.981	0.671	0.612	1.3e-68
TAIR|locus:2130419	322	OASA1 "O-acetylserine (thiol)	0.963	0.661	0.615	9.2e-68
TAIR|locus:2080417	433	OASC "O-acetylserine (thiol) l	0.990	0.505	0.561	1.8e-64
UNIPROTKB|Q1KLZ1	375	CAS2 "L-3-cyanoalanine synthas	0.963	0.568	0.544	1.7e-59
UNIPROTKB|Q1KLZ2	376	CAS1 "L-3-cyanoalanine synthas	0.963	0.566	0.535	2.7e-59
UNIPROTKB|Q43153	368	CYSC "Bifunctional L-3-cyanoal	0.963	0.578	0.539	5.7e-59
UNIPROTKB|Q76MX2	351	PCAS-1 "Bifunctional L-3-cyano	0.959	0.603	0.533	7.3e-59

TAIR|locus:2143814 CYSD2 "cysteine synthase D2" [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 135/217 (62%), Positives = 166/217 (76%)

Query:     4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
             ++C I NDITELIGNTPMVYLNN+VDGC ARIAAKLEMMEPCSSVKDRIA+SMIKDAE+K
Sbjct:     3 DRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDK 62

Query:    64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
             GLITPGK+ LIE T+GNTGIG+AC  AA+GYK+ILVMP+ MSLE+RIIL+A GA+L L++
Sbjct:    63 GLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHLSD 122

Query:   124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXX 183
               +G+       E +L+K P  + P QF+NPANP+ HY TTGPEIW  + G+VDI     
Sbjct:   123 QRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGV 182

Query:   184 XXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                        FLK++N +IKV  VEP ES +L+GG+
Sbjct:   183 GTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQ 219

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IMP

GO:0005739 "mitochondrion" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TAIR|locus:2114804 CYSD1 "cysteine synthase D1" [Arabidopsis thaliana (taxid:3702)]

 Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
 Identities = 134/220 (60%), Positives = 164/220 (74%)

Query:     1 MGSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
             M  ++C+I +D T+LIGNTPMVYLNNIVDGC ARIAAKLEMMEPCSSVK+RIA+ MIKDA
Sbjct:     1 MEEDRCSIKDDATQLIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKERIAYGMIKDA 60

Query:    61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
             E+KGLITPGK+ LIE TSGNTGIG+A   AAKGYK++L MP+ MSLE++IIL A GA++ 
Sbjct:    61 EDKGLITPGKSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVH 120

Query:   121 LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFX 180
             LT+   G+       EE+ +K P S    QFKNP+NP+THY TTGPEIW  + G+VDI  
Sbjct:   121 LTDPSKGVQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILV 180

Query:   181 XXXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                           FLK+KN + KVYGVEP ESA+++GGK
Sbjct:   181 AGVGTGGTLSGSGRFLKEKNKDFKVYGVEPTESAVISGGK 220

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA;IMP

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS;RCA;IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009069 "serine family amino acid metabolic process" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

TAIR|locus:2043964 OASB "O-acetylserine (thiol) lyase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 134/219 (61%), Positives = 163/219 (74%)

Query:     2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
             G E   IA++  +LIG TPMVYLNN+V GC A +AAKLE+MEPC SVKDRI +SMI DAE
Sbjct:    69 GVEGLNIADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAE 128

Query:    62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
             EKGLITPGK+VL+E TSGNTGIG+A  AA+KGYKLIL MPA MSLE+R++L+A+GA+L+L
Sbjct:   129 EKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVL 188

Query:   122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
             T    G+    +  EE+L K P S+   QF NPANPK HYETTGPEIWE TRG++DI   
Sbjct:   189 TEPAKGMTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVA 248

Query:   182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                          F+K++ PE+KV GVEP ESAIL+GGK
Sbjct:   249 GIGTGGTITGVGRFIKERKPELKVIGVEPTESAILSGGK 287

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009536 "plastid" evidence=TAS

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2143754 DES1 "L-cysteine desulfhydrase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 133/217 (61%), Positives = 165/217 (76%)

Query:     4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
             ++  I ND+TELIGNTPMVYLN IVDGC ARIAAKLEMMEPCSS+KDRIA+SMIKDAE+K
Sbjct:     3 DRVLIKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAEDK 62

Query:    64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
             GLITPGK+ LIE T GNTGIG+A   A++GYK+IL+MP+ MSLE+RIIL+A GA++ LT+
Sbjct:    63 GLITPGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLTD 122

Query:   124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXX 183
               +GI  +    +E+L+K P  + PHQF NP NP+ HY TTGPEIW  + G+VDI     
Sbjct:   123 ISIGIKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVAGV 182

Query:   184 XXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                        FLK+KN +IKV  VEP+ESA+L+GGK
Sbjct:   183 GTGGTVTGTGKFLKEKNKDIKVCVVEPSESAVLSGGK 219

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TAIR|locus:2130419 OASA1 "O-acetylserine (thiol) lyase (OAS-TL) isoform A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 131/213 (61%), Positives = 160/213 (75%)

Query:     8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
             IA D+TELIGNTP+VYLNN+ +GC  R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI 
Sbjct:     5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64

Query:    68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
             PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+   G
Sbjct:    65 PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124

Query:   128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
             +       EE+L K P  +   QF+NPANPK HYETTGPEIW+GT G++D F        
Sbjct:   125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184

Query:   188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                    +LK++N  +K+YGVEP ESAIL+GGK
Sbjct:   185 TITGAGKYLKEQNANVKLYGVEPVESAILSGGK 217

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;IGI;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA;TAS

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005829 "cytosol" evidence=ISS;IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA;IMP;IDA

GO:0007568 "aging" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IMP

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2080417 OASC "O-acetylserine (thiol) lyase isoform C" [Arabidopsis thaliana (taxid:3702)]

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 123/219 (56%), Positives = 163/219 (74%)

Query:     2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
             G +   IA+++++LIG TPMVYLN+I  GC A IAAKLE+MEPC SVKDRI +SM+ DAE
Sbjct:   107 GPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAE 166

Query:    62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
             +KG I+PGK+VL+E TSGNTGIG+A  AA++GY+LIL MPA MS+E+R++L+A+GA+L+L
Sbjct:   167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226

Query:   122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
             T+   G+    +  EE+L   P ++   QF NPANPK HYETTGPEIW+ T+G+VDIF  
Sbjct:   227 TDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVA 286

Query:   182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                          F+K+KNP+ +V GVEP ES IL+GGK
Sbjct:   287 GIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK 325

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM;IDA;TAS

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009507 "chloroplast" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0048868 "pollen tube development" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

UNIPROTKB|Q1KLZ1 CAS2 "L-3-cyanoalanine synthase 2, mitochondrial" [Malus x domestica (taxid:3750)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 116/213 (54%), Positives = 146/213 (68%)

Query:     8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
             I   +++LIG TP+VYLN + +GC A IA K EM +P +S+KDR A SMI DAEEKGLIT
Sbjct:    56 IKTQVSQLIGRTPIVYLNKVTEGCGAFIAVKQEMFQPTASIKDRPALSMINDAEEKGLIT 115

Query:    68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
             PG+T LIE TSGN GI MA  AA KGYK++L MP++ SLE+R+ ++ +GA LILT+   G
Sbjct:   116 PGETTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVCMRCFGADLILTDPTKG 175

Query:   128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
             +    +   +LL   P +F   QF NPAN K H+ETTGPEIWE T GQVDIF        
Sbjct:   176 MGGTVKKAYDLLESTPNAFMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGSGG 235

Query:   188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                    +LK KNP +++YGVEPAES +LNGGK
Sbjct:   236 TVSGVGQYLKSKNPNVQIYGVEPAESNVLNGGK 268

GO:0009836 "fruit ripening, climacteric" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

UNIPROTKB|Q1KLZ2 CAS1 "L-3-cyanoalanine synthase 1, mitochondrial" [Malus x domestica (taxid:3750)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 114/213 (53%), Positives = 147/213 (69%)

Query:     8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
             I   +++LIG TP+VYLN + +GC A IA K EM +P +S+KDR A SMI DAEEKGLIT
Sbjct:    55 IKTQVSQLIGRTPIVYLNKVTEGCGAYIAVKQEMFQPTASIKDRPALSMINDAEEKGLIT 114

Query:    68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
             PG+T+LIE TSGN GI MA  AA +GYK++L MP++ SLE+R+ ++ +GA LILT+   G
Sbjct:   115 PGETILIEPTSGNMGISMAFMAAMRGYKMVLTMPSYTSLERRVCMRCFGADLILTDPTKG 174

Query:   128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
             +    +   +LL   P ++   QF NPAN K H+ETTGPEIWE T GQVDIF        
Sbjct:   175 MGGTVKKAYDLLESTPNAYMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGSGG 234

Query:   188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                    +LK KNP +++YGVEPAES +LNGGK
Sbjct:   235 TVSGVGQYLKSKNPNVQIYGVEPAESNVLNGGK 267

GO:0009836 "fruit ripening, climacteric" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

UNIPROTKB|Q43153 CYSC "Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial" [Spinacia oleracea (taxid:3562)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 115/213 (53%), Positives = 153/213 (71%)

Query:     8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
             I  ++++LIG TP+VYL+ I +G  A IA K EMM+P +SVKDR A +MI+DAE+KGLI+
Sbjct:    49 IKTNVSQLIGRTPLVYLSKISEGSGAYIAVKQEMMQPTASVKDRPALAMIEDAEKKGLIS 108

Query:    68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
             PGKTVLIE TSGN GI MA  AA KGYK++L MP++ S+E+R++++A+GA LILT+ + G
Sbjct:   109 PGKTVLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSMERRVVMRAFGADLILTDPDKG 168

Query:   128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
             +    +   +LL+  P  F   QF NPAN + H+ETTGPEIWE T+G+VDIF        
Sbjct:   169 MGGTVKKANQLLDSTPDGFMLQQFNNPANTQVHFETTGPEIWEDTQGKVDIFVMGIGSGG 228

Query:   188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                    +LK +NP +K+YGVEPAES ILNGGK
Sbjct:   229 TVSGVGRYLKSQNPNVKIYGVEPAESNILNGGK 261

GO:0004124 "cysteine synthase activity" evidence=IDA

GO:0006534 "cysteine metabolic process" evidence=IDA

GO:0019499 "cyanide metabolic process" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

UNIPROTKB|Q76MX2 PCAS-1 "Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial" [Solanum tuberosum (taxid:4113)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 113/212 (53%), Positives = 146/212 (68%)

Query:     8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
             I   +++LIG TP+VYLN + +GC A IA K EMM+P SS+KDR AF+MI DAE+KGLIT
Sbjct:    32 IKTQVSQLIGKTPLVYLNKVSEGCGAYIAVKQEMMQPTSSIKDRPAFAMINDAEKKGLIT 91

Query:    68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
             PGKT LIE TSGN GI MA  AA KGYK+IL MP++ SLE+R+ ++A+GA L+ T+   G
Sbjct:    92 PGKTTLIEPTSGNMGISMAFMAAMKGYKMILTMPSYTSLERRVTMRAFGADLVTTDPTKG 151

Query:   128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
             +    +   +LL   P ++   QF NPAN + H+ETTGPEIWE T+G VDIF        
Sbjct:   152 MGGTIKKAYDLLESTPNAYMLQQFSNPANTQAHFETTGPEIWEDTQGNVDIFVMGIGSGG 211

Query:   188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGG 219
                    +LK KNP +K+YG+EP ES +LNGG
Sbjct:   212 TVSGVGQYLKSKNPNVKIYGIEPTESNVLNGG 243

GO:0004124 "cysteine synthase activity" evidence=IDA

GO:0006534 "cysteine metabolic process" evidence=IDA

GO:0019499 "cyanide metabolic process" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P37887	CYSK_BACSU	2, ., 5, ., 1, ., 4, 7	0.5420	0.9547	0.6850	yes	no
O32978	CYSK_MYCLE	2, ., 5, ., 1, ., 4, 7	0.5093	0.9638	0.6870	yes	no
Q7DDL5	CYSK_NEIMB	2, ., 5, ., 1, ., 4, 7	0.5373	0.9592	0.6838	yes	no
Q9XEA8	CYSK2_ORYSJ	2, ., 5, ., 1, ., 4, 7	0.6863	0.9954	0.6769	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00031107001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (323 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00000669001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (403 aa)	•					•	•		0.957
	GSVIVG00024596001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (668 aa)				•		•	•		0.950
	GSVIVG00008446001	SubName- Full=Chromosome undetermined scaffold_1460, whole genome shotgun sequence; (261 aa)	•					•	•		0.945
	GSVIVG00016589001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (290 aa)	•					•	•		0.943
	GSVIVG00011752001	SubName- Full=Chromosome undetermined scaffold_334, whole genome shotgun sequence; (307 aa)	•					•	•		0.935
	GSVIVG00033340001	SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (304 aa)	•					•	•		0.928
	GSVIVG00033361001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (373 aa)			•			•	•	•	0.916
	GSVIVG00033683001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (390 aa)			•			•	•	•	0.905
	GSVIVG00026889001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (371 aa)			•			•	•	•	0.905
	GSVIVG00031101001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (251 aa)			•			•	•	•	0.905

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
PLN02565	322	PLN02565, PLN02565, cysteine synthase	1e-116
PLN00011	323	PLN00011, PLN00011, cysteine synthase	1e-112
TIGR01136	299	TIGR01136, cysKM, cysteine synthase	1e-104
cd01561	291	cd01561, CBS_like, CBS_like: This subgroup include	1e-102
PLN02556	368	PLN02556, PLN02556, cysteine synthase/L-3-cyanoala	1e-101
COG0031	300	COG0031, CysK, Cysteine synthase [Amino acid trans	1e-100
TIGR01139	298	TIGR01139, cysK, cysteine synthase A	8e-98
PLN03013	429	PLN03013, PLN03013, cysteine synthase	6e-95
PRK11761	296	PRK11761, cysM, cysteine synthase B; Provisional	2e-77
PRK10717	330	PRK10717, PRK10717, cysteine synthase A; Provision	2e-75
TIGR01137	454	TIGR01137, cysta_beta, cystathionine beta-synthase	3e-72
TIGR01138	290	TIGR01138, cysM, cysteine synthase B	2e-68
cd00640	244	cd00640, Trp-synth-beta_II, Tryptophan synthase be	7e-59
TIGR03945	304	TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate bio	9e-58
pfam00291	295	pfam00291, PALP, Pyridoxal-phosphate dependent enz	1e-51
PLN02356	423	PLN02356, PLN02356, phosphateglycerate kinase	2e-37
COG1171	347	COG1171, IlvA, Threonine dehydratase [Amino acid t	2e-17
cd01562	304	cd01562, Thr-dehyd, Threonine dehydratase: The fir	8e-17
TIGR01127	380	TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, m	7e-15
TIGR01124	499	TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, b	8e-12
PRK08638	333	PRK08638, PRK08638, threonine dehydratase; Validat	1e-10
PRK06382	406	PRK06382, PRK06382, threonine dehydratase; Provisi	2e-10
PRK12483	521	PRK12483, PRK12483, threonine dehydratase; Reviewe	5e-10
PLN02550	591	PLN02550, PLN02550, threonine dehydratase	6e-09
cd01563	324	cd01563, Thr-synth_1, Threonine synthase is a pyri	7e-09
PRK06721	352	PRK06721, PRK06721, threonine synthase; Reviewed	1e-08
PRK08198	404	PRK08198, PRK08198, threonine dehydratase; Provisi	7e-08
PRK06815	317	PRK06815, PRK06815, hypothetical protein; Provisio	1e-07
PRK09224	504	PRK09224, PRK09224, threonine dehydratase; Reviewe	1e-07
TIGR02079	409	TIGR02079, THD1, threonine dehydratase	4e-07
COG0498	411	COG0498, ThrC, Threonine synthase [Amino acid tran	9e-07
PRK06352	351	PRK06352, PRK06352, threonine synthase; Validated	2e-06
PRK07409	353	PRK07409, PRK07409, threonine synthase; Validated	3e-06
cd06448	316	cd06448, L-Ser-dehyd, Serine dehydratase is a pyri	6e-06
PRK06381	319	PRK06381, PRK06381, threonine synthase; Validated	1e-05
PRK06608	338	PRK06608, PRK06608, threonine dehydratase; Provisi	1e-05
PRK08329	347	PRK08329, PRK08329, threonine synthase; Validated	2e-05
PRK06450	338	PRK06450, PRK06450, threonine synthase; Validated	2e-05
PRK08526	403	PRK08526, PRK08526, threonine dehydratase; Provisi	3e-05
PRK08639	420	PRK08639, PRK08639, threonine dehydratase; Validat	6e-05
TIGR02991	317	TIGR02991, ectoine_eutB, ectoine utilization prote	1e-04
PRK05638	442	PRK05638, PRK05638, threonine synthase; Validated	3e-04
PRK07476	322	PRK07476, eutB, threonine dehydratase; Provisional	3e-04
PRK07048	321	PRK07048, PRK07048, serine/threonine dehydratase;	3e-04
PRK06260	397	PRK06260, PRK06260, threonine synthase; Validated	4e-04
PRK08246	310	PRK08246, PRK08246, threonine dehydratase; Provisi	5e-04
TIGR00260	328	TIGR00260, thrC, threonine synthase	6e-04
PRK07334	403	PRK07334, PRK07334, threonine dehydratase; Provisi	0.001
PRK06110	322	PRK06110, PRK06110, hypothetical protein; Provisio	0.003
PRK08197	394	PRK08197, PRK08197, threonine synthase; Validated	0.003

>gnl|CDD|166206 PLN02565, PLN02565, cysteine synthase

 Score =  334 bits (859), Expect = e-116
 Identities = 153/217 (70%), Positives = 183/217 (84%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           EK +IA D+TELIG TP+VYLNN+VDGC ARIAAKLEMMEPCSSVKDRI +SMI DAEEK
Sbjct: 1   EKSSIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEK 60

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLI PG++VLIE TSGNTGIG+A  AAAKGYKLI+ MPA MSLE+RIIL A+GA+L+LT+
Sbjct: 61  GLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTD 120

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
              G+    +  EE+L K P S+   QF+NPANPK HYETTGPEIW+GT G+VD FVSGI
Sbjct: 121 PAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEIWKGTGGKVDAFVSGI 180

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GTGGT++G G +LK++NP+IK+YGVEP ESA+L+GGK
Sbjct: 181 GTGGTITGAGKYLKEQNPDIKLYGVEPVESAVLSGGK 217

Length = 322

>gnl|CDD|177651 PLN00011, PLN00011, cysteine synthase

 Score =  324 bits (831), Expect = e-112
 Identities = 148/217 (68%), Positives = 181/217 (83%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           ++C I ND+TELIGNTPMVYLNNIVDGC ARIAAKLEMMEPCSSVKDRIA+SMIKDAE+K
Sbjct: 3   DRCLIKNDVTELIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDK 62

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLITPGK+ LIE T+GNTGIG+AC  AA+GYK+ILVMP+ MSLE+RIIL+A GA++ LT+
Sbjct: 63  GLITPGKSTLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTD 122

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
             +G+       EE+L+K P  + P QF+NPANP+ HY TTGPEIW  + G+VDI V+G+
Sbjct: 123 QSIGLKGMLEKAEEILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVAGV 182

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GTGGT +GVG FLK+KN +IKV  VEP ESA+L+GG+
Sbjct: 183 GTGGTATGVGKFLKEKNKDIKVCVVEPVESAVLSGGQ 219

Length = 323

>gnl|CDD|233286 TIGR01136, cysKM, cysteine synthase

 Score =  302 bits (775), Expect = e-104
 Identities = 125/210 (59%), Positives = 156/210 (74%), Gaps = 1/210 (0%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           I ELIGNTP+V LN +  GC AR+ AKLE   P  SVKDRIA SMI+DAE++GL+ PG T
Sbjct: 1   IEELIGNTPLVRLNRLAPGCDARVLAKLEGRNPSGSVKDRIALSMIEDAEKRGLLKPGDT 60

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
            +IE TSGNTGI +A  AAAKGYKLIL MP  MSLE+R +L+AYGA+LILT AE G+   
Sbjct: 61  -IIEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAEEGMKGA 119

Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSG 191
               EEL  +        QF+NPANP+ HY+TTGPEIW  T G++D FV+G+GTGGT++G
Sbjct: 120 IDKAEELAAETNKYVMLDQFENPANPEAHYKTTGPEIWRDTDGRIDHFVAGVGTGGTITG 179

Query: 192 VGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           VG +LK++NP IK+  VEPAES +L+GG+ 
Sbjct: 180 VGRYLKEQNPNIKIVAVEPAESPVLSGGEP 209

This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff [Amino acid biosynthesis, Serine family]. Length = 299

>gnl|CDD|107204 cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase

 Score =  297 bits (763), Expect = e-102
 Identities = 111/207 (53%), Positives = 144/207 (69%), Gaps = 3/207 (1%)

Query: 17  GNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIEC 76
           GNTP+V LN +  G  A I AKLE   P  SVKDRIA  MI+DAE++GL+ PG T+ IE 
Sbjct: 1   GNTPLVRLNRLSPGTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPGTTI-IEP 59

Query: 77  TSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRI-- 134
           TSGNTGIG+A  AAAKGY+ I+VMP  MS EKR +L+A GA++ILT        +  I  
Sbjct: 60  TSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAEADGMKGAIAK 119

Query: 135 VEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGN 194
             EL  + P +F  +QF+NPANP+ HYETT PEIWE   G+VD FV+G+GTGGT++GV  
Sbjct: 120 ARELAAETPNAFWLNQFENPANPEAHYETTAPEIWEQLDGKVDAFVAGVGTGGTITGVAR 179

Query: 195 FLKKKNPEIKVYGVEPAESAILNGGKA 221
           +LK+KNP +++ GV+P  S + +GG  
Sbjct: 180 YLKEKNPNVRIVGVDPVGSVLFSGGPP 206

CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine. Length = 291

>gnl|CDD|178171 PLN02556, PLN02556, cysteine synthase/L-3-cyanoalanine synthase

 Score =  296 bits (759), Expect = e-101
 Identities = 130/213 (61%), Positives = 162/213 (76%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           I  D ++LIG TP+VYLN + +GC A IAAK EM +P SS+KDR A +MI+DAE+K LIT
Sbjct: 49  IKTDASQLIGKTPLVYLNKVTEGCGAYIAAKQEMFQPTSSIKDRPALAMIEDAEKKNLIT 108

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PGKT LIE TSGN GI +A  AA KGYK+IL MP++ SLE+R+ ++A+GA+L+LT+   G
Sbjct: 109 PGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKG 168

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187
           +    +   ELL   P +F   QF NPAN + H+ETTGPEIWE T GQVDIFV GIG+GG
Sbjct: 169 MGGTVKKAYELLESTPDAFMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMGIGSGG 228

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           TVSGVG +LK KNP +K+YGVEPAES +LNGGK
Sbjct: 229 TVSGVGKYLKSKNPNVKIYGVEPAESNVLNGGK 261

Length = 368

>gnl|CDD|223110 COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]

 Score =  292 bits (750), Expect = e-100
 Identities = 112/216 (51%), Positives = 152/216 (70%), Gaps = 3/216 (1%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           I   I +LIGNTP+V LN +  G    I AKLE   P  SVKDRIA  MI+DAE++GL+ 
Sbjct: 1   IYESILDLIGNTPLVRLNRLSPGTGVEIYAKLESFNPGGSVKDRIALYMIEDAEKRGLLK 60

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG T+ +E TSGNTGI +A  AAAKGY+LI+VMP  MS E+R +L+A GA++ILT    G
Sbjct: 61  PGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPG 119

Query: 128 IDEEFR-IVEELLNKIP-TSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185
             +      +EL  +IP  +   +QF+NPANP+ HYETTGPEIW+ T G+VD FV+G+GT
Sbjct: 120 NMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGT 179

Query: 186 GGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           GGT++GV  +LK++NP +++  V+P  S +L+GG+ 
Sbjct: 180 GGTITGVARYLKERNPNVRIVAVDPEGSVLLSGGEG 215

Length = 300

>gnl|CDD|233288 TIGR01139, cysK, cysteine synthase A

 Score =  286 bits (733), Expect = 8e-98
 Identities = 118/211 (55%), Positives = 153/211 (72%), Gaps = 3/211 (1%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           I+ELIGNTP+V LN I +GC A +  KLE   P  SVKDRIA +MI DAE++GL+ PGKT
Sbjct: 1   ISELIGNTPLVRLNRI-EGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGKT 59

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
            ++E TSGNTGI +A  AAA+GYKLIL MP  MS+E+R +L+AYGA+L+LT    G+   
Sbjct: 60  -IVEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGA 118

Query: 132 FRIVEELLNKIPTSFN-PHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVS 190
               EE+    P S+    QF+NPANP+ H +TTGPEIW  T G++D FV+G+GTGGT++
Sbjct: 119 IAKAEEIAASTPNSYFMLQQFENPANPEIHRKTTGPEIWRDTDGKLDAFVAGVGTGGTIT 178

Query: 191 GVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           GVG  LK++ P IK+  VEPAES +L+GGK 
Sbjct: 179 GVGEVLKEQKPNIKIVAVEPAESPVLSGGKP 209

This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate [Amino acid biosynthesis, Serine family]. Length = 298

>gnl|CDD|178587 PLN03013, PLN03013, cysteine synthase

 Score =  283 bits (725), Expect = 6e-95
 Identities = 134/219 (61%), Positives = 177/219 (80%)

Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G +   IA+++++LIG TPMVYLN+I  GC A IAAKLE+MEPC SVKDRI +SM+ DAE
Sbjct: 107 GPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAE 166

Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           +KG I+PGK+VL+E TSGNTGIG+A  AA++GY+LIL MPA MS+E+R++L+A+GA+L+L
Sbjct: 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226

Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVS 181
           T+   G+    +  EE+L   P ++   QF NPANPK HYETTGPEIW+ T+G+VDIFV+
Sbjct: 227 TDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVA 286

Query: 182 GIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           GIGTGGT++GVG F+K+KNP+ +V GVEP ES IL+GGK
Sbjct: 287 GIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK 325

Length = 429

>gnl|CDD|236972 PRK11761, cysM, cysteine synthase B; Provisional

 Score =  234 bits (599), Expect = 2e-77
 Identities = 100/213 (46%), Positives = 132/213 (61%), Gaps = 19/213 (8%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           + + IGNTP+V L  +       I AKLE   P  SVKDR A SMI  AE++G I PG T
Sbjct: 6   LEDTIGNTPLVKLQRLPPDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPGDT 65

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI--- 128
            LIE TSGNTGI +A  AA KGY++ L+MP  MS E+R  ++AYGA+LIL   E G+   
Sbjct: 66  -LIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGA 124

Query: 129 -DEEFRIVEE----LLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
            D   ++  E    +L+         QF NP NP  HYETTGPEIW  T G++  FVS +
Sbjct: 125 RDLALQMQAEGEGKVLD---------QFANPDNPLAHYETTGPEIWRQTEGRITHFVSSM 175

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAE-SAI 215
           GT GT+ GV  +LK++NP +++ G++P E S+I
Sbjct: 176 GTTGTIMGVSRYLKEQNPAVQIVGLQPEEGSSI 208

Length = 296

>gnl|CDD|182672 PRK10717, PRK10717, cysteine synthase A; Provisional

 Score =  230 bits (589), Expect = 2e-75
 Identities = 102/221 (46%), Positives = 142/221 (64%), Gaps = 16/221 (7%)

Query: 8   IANDITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
           I  D+++ IGNTP++ LN   +  GC   I  K E + P  SVKDR A ++I DAE++GL
Sbjct: 3   IFEDVSDTIGNTPLIRLNRASEATGC--EILGKAEFLNPGGSVKDRAALNIIWDAEKRGL 60

Query: 66  ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
           + PG T+ +E T+GNTGIG+A  AAA+GYK ++VMP   S EK+ +L+A GA+L+L  A 
Sbjct: 61  LKPGGTI-VEGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119

Query: 126 MGIDEE------FRIVEELLNKIPTSF---NPHQFKNPANPKTHYETTGPEIWEGTRGQV 176
              +         R+ EEL+   P      N  QF NPAN + HYETTGPEIWE T G+V
Sbjct: 120 PYANPNNYVKGAGRLAEELVASEPNGAIWAN--QFDNPANREAHYETTGPEIWEQTDGKV 177

Query: 177 DIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217
           D FV  +GTGGT++GV  +LK+ NP++K+   +P  SA+ +
Sbjct: 178 DGFVCAVGTGGTLAGVSRYLKETNPKVKIVLADPTGSALYS 218

Length = 330

>gnl|CDD|233287 TIGR01137, cysta_beta, cystathionine beta-synthase

 Score =  225 bits (576), Expect = 3e-72
 Identities = 99/216 (45%), Positives = 139/216 (64%), Gaps = 5/216 (2%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           I ++I +LIGNTP+V LN +  G K  + AK E   P  SVKDRIA  MI+DAE  G + 
Sbjct: 1   IRDNIIDLIGNTPLVRLNKVSKGIKCELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLK 60

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG T +IE TSGNTGIG+A  AA KGYK I+V+P  MS EK  +L+A GA+++ T     
Sbjct: 61  PGDT-IIEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTAAA 119

Query: 128 IDE---EFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIG 184
            D       + + L+ +IP +    Q+ NP+NP  HY+ TGPEI E   G++D+FV+G G
Sbjct: 120 FDSPESHIGVAKRLVREIPGAHILDQYNNPSNPLAHYDGTGPEILEQCEGKLDMFVAGAG 179

Query: 185 TGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           TGGT++G+  +LK+ NP+ ++ G +P E +IL   +
Sbjct: 180 TGGTITGIARYLKESNPKCRIVGADP-EGSILAQPE 214

Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven [Amino acid biosynthesis, Serine family]. Length = 454

>gnl|CDD|130208 TIGR01138, cysM, cysteine synthase B

 Score =  211 bits (538), Expect = 2e-68
 Identities = 95/207 (45%), Positives = 132/207 (63%), Gaps = 2/207 (0%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           I + +GNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE++G I PG  
Sbjct: 2   IEQTVGNTPLVRLQRMGPENGSEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGD- 60

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
           VLIE TSGNTGI +A  AA KGY++ L+MP  MS E++  ++AYGA+LIL   E G++  
Sbjct: 61  VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTKEEGMEGA 120

Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSG 191
             +  EL N+        QF NP NP  HY +TGPEIW+ T G++  FVS +GT GT+ G
Sbjct: 121 RDLALELANRGEGKL-LDQFNNPDNPYAHYTSTGPEIWQQTGGRITHFVSSMGTTGTIMG 179

Query: 192 VGNFLKKKNPEIKVYGVEPAESAILNG 218
           V  FLK++NP +++ G++P E + + G
Sbjct: 180 VSRFLKEQNPPVQIVGLQPEEGSSIPG 206

CysM differs from CysK in that it can also use thiosulfate instead of sulfide, to produce cysteine thiosulfonate instead of cysteine. Alternate name: O-acetylserine (thiol)-lyase [Amino acid biosynthesis, Serine family]. Length = 290

>gnl|CDD|107202 cd00640, Trp-synth-beta_II, Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions

 Score =  185 bits (472), Expect = 7e-59
 Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 6/193 (3%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTS 78
           TP+V L  +     A I  KLE + P  S KDR A ++I  AEE+G +   K V+IE T 
Sbjct: 1   TPLVRLKRLSKLGGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKL--PKGVIIESTG 58

Query: 79  GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEEL 138
           GNTGI +A  AA  G K  +VMP   S EK   ++A GA+++L   +   D+   + +EL
Sbjct: 59  GNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDF--DDAIALAKEL 116

Query: 139 LNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQ-VDIFVSGIGTGGTVSGVGNFLK 197
             + P ++  +QF NPAN      T G EI E   GQ  D  V  +G GG ++G+   LK
Sbjct: 117 AEEDPGAYYVNQFDNPANIAGQG-TIGLEILEQLGGQKPDAVVVPVGGGGNIAGIARALK 175

Query: 198 KKNPEIKVYGVEP 210
           +  P +KV GVEP
Sbjct: 176 ELLPNVKVIGVEP 188

This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine. Length = 244

>gnl|CDD|234409 TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate biosynthesis protein SbnA

 Score =  184 bits (469), Expect = 9e-58
 Identities = 81/217 (37%), Positives = 114/217 (52%), Gaps = 13/217 (5%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           I  LIGNTP+V L  +      R+ AKLE   P  S+KDR A  +++ A ++G ITPG T
Sbjct: 1   ILSLIGNTPLVKLERLFPDAPFRLFAKLEGFNPGGSIKDRPALYILEAAIKRGRITPG-T 59

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA--EMGID 129
            +IE +SGN GI +A   A KG + I V+   +S +   +L+AYGA++       E G  
Sbjct: 60  TIIESSSGNLGIALAMICAYKGLRFICVVDPNISPQNLKLLRAYGAEVEKVTEPDETG-- 117

Query: 130 EEF-----RIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIG 184
             +       V ELL  IP ++ P+Q+ NP NP+ HY  TG EI       +D    G+ 
Sbjct: 118 -GYLGTRIARVRELLASIPDAYWPNQYANPDNPRAHYHGTGREIAR-AFPPLDYLFVGVS 175

Query: 185 TGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           T GT+ G    L+++ P  KV  V+   S I  GG  
Sbjct: 176 TTGTLMGCSRRLRERGPNTKVIAVDAVGSVIF-GGPP 211

Members of this family include SbnA, a protein of the staphyloferrin B biosynthesis operon of Staphylococcus aureus. SbnA and SbnB together appear to synthesize 2,3-diaminopropionate, a precursor of certain siderophores and other secondary metabolites. SbnA is a pyridoxal phosphate-dependent enzyme [Cellular processes, Biosynthesis of natural products]. Length = 304

>gnl|CDD|215840 pfam00291, PALP, Pyridoxal-phosphate dependent enzyme

 Score =  168 bits (428), Expect = 1e-51
 Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 13/209 (6%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           I+  IG TP+V L + + G   R+  KLE + P  S KDR A  ++  A E+G       
Sbjct: 1   ISLGIGPTPLVRLPSPLLGA--RVYLKLESLNPTGSFKDRGAAYLLLRALERG------A 52

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
            ++E +SGNTG  +A  AA  G K+ +V+P   S  K ++++A GA++IL  +E   D+ 
Sbjct: 53  TVVEASSGNTGRALAAAAARLGLKVTIVVPEGASPGKLLLMRALGAEVILVVSEGDYDDA 112

Query: 132 FRIVEELLNKIPTSFNP---HQFKNPANPKTHYETTGPEIWEGT-RGQVDIFVSGIGTGG 187
             + EE    +     P    Q+ NP N    Y+T G EI E   +G  D  V  +G GG
Sbjct: 113 LELAEEAAELLAAYDGPIPLGQYNNP-NVIAGYKTIGLEILEQLGQGDPDAVVVPVGGGG 171

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAIL 216
             +G+   LK+  P I+V GVEP  +  L
Sbjct: 172 LAAGIARGLKELGPGIRVIGVEPEGAPAL 200

Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4. Length = 295

>gnl|CDD|215204 PLN02356, PLN02356, phosphateglycerate kinase

 Score =  134 bits (338), Expect = 2e-37
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 46/251 (18%)

Query: 10  NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
           N + + IGNTP++ +N++ +     I  K E + P  SVKDR+A  +I++A E G + PG
Sbjct: 45  NGLIDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQLFPG 104

Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL---------- 119
             V+ E ++G+T I +A  A A G K  +V+P  +++EK  IL+A GA +          
Sbjct: 105 G-VVTEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRPVSITH 163

Query: 120 -------------------------ILTNAEMGIDEEFRIVEELLNKIPTSFNPH----- 149
                                      T+          I EE   K  + F+       
Sbjct: 164 KDHYVNIARRRALEANELASKRRKGSETDGIHLEKTNGCISEE--EKENSLFSSSCTGGF 221

Query: 150 ---QFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVY 206
              QF+N AN + HYE TGPEIWE T+G +D FV+  GTGGT++GV  FL++KNP IK +
Sbjct: 222 FADQFENLANFRAHYEGTGPEIWEQTQGNLDAFVAAAGTGGTLAGVSRFLQEKNPNIKCF 281

Query: 207 GVEPAESAILN 217
            ++P  S + N
Sbjct: 282 LIDPPGSGLFN 292

Length = 423

>gnl|CDD|224092 COG1171, IlvA, Threonine dehydratase [Amino acid transport and metabolism]

 Score = 78.8 bits (195), Expect = 2e-17
 Identities = 62/207 (29%), Positives = 92/207 (44%), Gaps = 29/207 (14%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTS 78
           TP+    ++ +   A I  K E ++P  S K R A++ +    E+     G   +I  ++
Sbjct: 26  TPLQRSPSLSERLGAEIYLKRENLQPVGSFKIRGAYNKLSSLSEEEERAAG---VIAASA 82

Query: 79  GNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEE 137
           GN   G+A +AA + G K  +VMP      K    + YGA++IL       D+ +   EE
Sbjct: 83  GNHAQGVA-YAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGDNF--DDAYAAAEE 139

Query: 138 L-----LNKIPTSFNPH----QFKNPANPKTHYETTGPEIWEGTRGQVD-IFVSGIGTGG 187
           L     L  +P   +P     Q            T   EI E      D +FV  +G GG
Sbjct: 140 LAEEEGLTFVPPFDDPDVIAGQ-----------GTIALEILEQLPDLPDAVFVP-VGGGG 187

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESA 214
            +SG+   LK  +PEIKV GVEP  + 
Sbjct: 188 LISGIATALKALSPEIKVIGVEPEGAP 214

Length = 347

>gnl|CDD|107205 cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen

 Score = 76.8 bits (190), Expect = 8e-17
 Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 37/210 (17%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI----KDAEEKGLITPGKTVLI 74
           TP++    + +   A +  K E ++   S K R A++ +    ++   KG++        
Sbjct: 18  TPLLTSPTLSELLGAEVYLKCENLQKTGSFKIRGAYNKLLSLSEEERAKGVVA------- 70

Query: 75  ECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
             ++GN   G+A +AA   G    +VMP      K    +AYGA+++L       DE   
Sbjct: 71  -ASAGNHAQGVA-YAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE--DFDEAEA 126

Query: 134 IVEELLNK-----IPTSFNPH----QFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIG 184
              EL  +     I    +P     Q            T G EI E       +FV  +G
Sbjct: 127 KARELAEEEGLTFIHPFDDPDVIAGQ-----------GTIGLEILEQVPDLDAVFVP-VG 174

Query: 185 TGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
            GG ++G+   +K  +P  KV GVEP  + 
Sbjct: 175 GGGLIAGIATAVKALSPNTKVIGVEPEGAP 204

Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions. Length = 304

>gnl|CDD|130197 TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, medium form

 Score = 72.1 bits (177), Expect = 7e-15
 Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTS 78
           TP++Y   + D   + +  KLE ++   S K R A + I +  E       +  ++  ++
Sbjct: 1   TPLIYSTTLSDITGSEVYLKLENLQKTGSFKIRGALNKIANLSEDQ----RQRGVVAASA 56

Query: 79  GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEEL 138
           GN   G+A  A   G K ++VMP      K    ++YGA++IL   +   DE +     L
Sbjct: 57  GNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDD--YDEAYAFATSL 114

Query: 139 LNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKK 198
             +    F  H F +         T G EI E     VD  +  +G GG +SGV +  K+
Sbjct: 115 AEEEGRVF-VHPFDDE-FVMAGQGTIGLEIME-DIPDVDTVIVPVGGGGLISGVASAAKQ 171

Query: 199 KNPEIKVYGVE----PAESAILNGGKA 221
            NP +KV GVE    P+    L  GK 
Sbjct: 172 INPNVKVIGVEAEGAPSMYESLREGKI 198

A form of threonine dehydratase with two copies of the C-terminal domain pfam00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes [Amino acid biosynthesis, Pyruvate family]. Length = 380

>gnl|CDD|130194 TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, biosynthetic, long form

 Score = 63.6 bits (155), Expect = 8e-12
 Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 24/206 (11%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI----KDAEEKGLITPGKTVLI 74
           TP+     + +    RI  K E ++P  S K R A++ +     + + +G+I        
Sbjct: 18  TPLQKAAKLSERLGNRILIKREDLQPVFSFKLRGAYNKMAQLSPEQKARGVIA------- 70

Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRI 134
             ++GN   G+A  AA  G K ++VMP      K   ++ +G +++L  A     +   I
Sbjct: 71  -ASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGANFDDAKAKAI 129

Query: 135 VEELLNKIPTSFNPHQFKNP---ANPKTHYETTGPEIWEGTRGQVD-IFVSGIGTGGTVS 190
             EL  +   +F  H F +P   A   T       EI       +D +FV  +G GG  +
Sbjct: 130 --ELSQEKGLTF-IHPFDDPLVIAGQGT----LALEILRQVANPLDAVFVP-VGGGGLAA 181

Query: 191 GVGNFLKKKNPEIKVYGVEPAESAIL 216
           GV   +K+  PEIKV GVEP +S  +
Sbjct: 182 GVAALIKQLMPEIKVIGVEPTDSDCM 207

This model describes a form of threonine ammonia-lyase, a pyridoxal-phosphate dependent enzyme, with two copies of the threonine dehydratase C-terminal domain (pfam00585). Members with known function participate in isoleucine biosynthesis and are inhibited by isoleucine. Alternate name: threonine deaminase, threonine dehydratase. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain [Amino acid biosynthesis, Pyruvate family]. Length = 499

>gnl|CDD|236317 PRK08638, PRK08638, threonine dehydratase; Validated

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 23/205 (11%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAF---SMIKDAE-EKGLIT 67
           +   I  TP+   N + + CK  I  KLE M+   S K R AF   S + DAE  KG++ 
Sbjct: 21  LAGRIRKTPLPRSNYLSERCKGEIFLKLENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVA 80

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
                   C++GN   G+A   A  G    +VMP      K      YGA+++L      
Sbjct: 81  --------CSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNF- 131

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPAN-PK--THYETTGPEIWEGTRGQVDIFVSGIG 184
            ++    VEE++ +   +F P     P + PK      T G EI E     VD  +  IG
Sbjct: 132 -NDTIAKVEEIVEEEGRTFIP-----PYDDPKVIAGQGTIGLEILEDLW-DVDTVIVPIG 184

Query: 185 TGGTVSGVGNFLKKKNPEIKVYGVE 209
            GG ++G+   LK  NP I + GV+
Sbjct: 185 GGGLIAGIAVALKSINPTIHIIGVQ 209

Length = 333

>gnl|CDD|180550 PRK06382, PRK06382, threonine dehydratase; Provisional

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 17/202 (8%)

Query: 16  IGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIA---FSMIKDAEEK-GLITPGKT 71
           +  TP+++     D     I  KLE  +   S K R A   FS + + E + G+IT    
Sbjct: 23  LNRTPLIHSTTFGDEYGGDIYFKLENFQKTGSFKSRGAVFKFSKLSEDELRNGVIT---- 78

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
                ++GN   G+A  A+  G    +VMP +   +K   ++AYGA +ILT  +   DE 
Sbjct: 79  ----ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDY--DEA 132

Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSG 191
            R  +++      +F   +  N     +   T G EI E     +D  +  +G GG +SG
Sbjct: 133 HRYADKIAMDENRTFI--EAFNDRWVISGQGTIGLEIME-DLPDLDQIIVPVGGGGLISG 189

Query: 192 VGNFLKKKNPEIKVYGVEPAES 213
           +    K  NP +K+ G+E   S
Sbjct: 190 IALAAKHINPNVKIIGIESELS 211

Length = 406

>gnl|CDD|237111 PRK12483, PRK12483, threonine dehydratase; Reviewed

 Score = 58.3 bits (141), Expect = 5e-10
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 18/188 (9%)

Query: 34  RIAAKLEMMEPCSSVKDRIAFSMIK----DAEEKGLITPGKTVLIECTSGNTGIGMACFA 89
           ++  K E ++P  S K R A++ +     +   +G+IT         ++GN   G+A  A
Sbjct: 53  QVLLKREDLQPVFSFKIRGAYNKMARLPAEQLARGVIT--------ASAGNHAQGVALAA 104

Query: 90  AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPH 149
           A  G K ++VMP      K   ++A+G +++L        +      +L  +   +F   
Sbjct: 105 ARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESF--PDALAHALKLAEEEGLTF-VP 161

Query: 150 QFKNPANPKTHYETTGPEIWEGTRGQVD-IFVSGIGTGGTVSGVGNFLKKKNPEIKVYGV 208
            F +P +      T   EI     G +D IFV  +G GG ++G+  ++K   PEIKV GV
Sbjct: 162 PFDDP-DVIAGQGTVAMEILRQHPGPLDAIFVP-VGGGGLIAGIAAYVKYVRPEIKVIGV 219

Query: 209 EPAESAIL 216
           EP +S  L
Sbjct: 220 EPDDSNCL 227

Length = 521

>gnl|CDD|178165 PLN02550, PLN02550, threonine dehydratase

 Score = 54.9 bits (132), Expect = 6e-09
 Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 24/203 (11%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI----KDAEEKGLITPGKTVLI 74
           +P+     + +    ++  K E ++P  S K R A++M+    K+  +KG+I        
Sbjct: 110 SPLQLAKKLSERLGVKVLLKREDLQPVFSFKLRGAYNMMAKLPKEQLDKGVI-------- 161

Query: 75  ECTS-GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL---TNAEMGIDE 130
            C+S GN   G+A  A   G   ++ MP      K   ++  GA ++L   +  E     
Sbjct: 162 -CSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQAYA 220

Query: 131 EFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVS 190
           + R +EE    IP   +P              T G EI    +G +      +G GG ++
Sbjct: 221 KQRALEEGRTFIPPFDHPDVIAGQG-------TVGMEIVRQHQGPLHAIFVPVGGGGLIA 273

Query: 191 GVGNFLKKKNPEIKVYGVEPAES 213
           G+  ++K+  PE+K+ GVEP+++
Sbjct: 274 GIAAYVKRVRPEVKIIGVEPSDA 296

Length = 591

>gnl|CDD|107206 cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate

 Score = 54.5 bits (132), Expect = 7e-09
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 22/183 (12%)

Query: 17  GNTPMVYLNNIVDGCKA-RIAAKLEMMEPCSSVKDR---IAFSMIKDAEEKGLITPGKTV 72
           GNTP+V    + +      +  K E + P  S KDR   +A S  K+   K +       
Sbjct: 21  GNTPLVRAPRLGERLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELGVKAVACA---- 76

Query: 73  LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEF 132
               ++GNT   +A +AA  G K ++ +PA  +L K     AYGA ++        D+  
Sbjct: 77  ----STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG--NFDDAL 130

Query: 133 RIVEELLNKIPTSFNPHQFKNPANPKTH--YETTGPEIWEGTRGQV-DIFVSGIGTGGTV 189
           R+V EL  +     +     N  NP      +T   EI E    +V D  V  +G GG +
Sbjct: 131 RLVRELAEENWIYLS-----NSLNPYRLEGQKTIAFEIAEQLGWEVPDYVVVPVGNGGNI 185

Query: 190 SGV 192
           + +
Sbjct: 186 TAI 188

It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants. Length = 324

>gnl|CDD|136018 PRK06721, PRK06721, threonine synthase; Reviewed

 Score = 53.9 bits (129), Expect = 1e-08
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 27/220 (12%)

Query: 11  DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK 70
           D++ + GNTP++ L NI      ++  K E   P  S KDR     +  A+E+     G 
Sbjct: 21  DVSLMEGNTPLIPLLNISKQLGIQLYGKYEGANPTGSFKDRGMVMAVAKAKEE-----GS 75

Query: 71  TVLIECTSGNTGIGMACFAAAKGYKLILVMP-AFMSLEKRIILQAYGAQLILTNAEMGID 129
             +I  ++GNT    A +AA  G K I+V+P   ++  K     AYGA++I  + E   D
Sbjct: 76  EAIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEII--SIEGNFD 133

Query: 130 EEFRIVEELLNKIP----TSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185
           +  + V  +  + P     S NP++ +         +T   EI +  +   D+    +G 
Sbjct: 134 DALKAVRNIAAEEPITLVNSVNPYRIEGQ-------KTAAFEICDQLQRAPDVLAIPVGN 186

Query: 186 GGTVS----GVGNFLKK---KNPEIKVYGVEPAESAILNG 218
            G ++    G   + K+   K P I  +  E A +AI+ G
Sbjct: 187 AGNITAYWKGFCEYEKEKGYKKPRIHGFEAEGA-AAIVKG 225

Length = 352

>gnl|CDD|236182 PRK08198, PRK08198, threonine dehydratase; Provisional

 Score = 51.7 bits (125), Expect = 7e-08
 Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 31/207 (14%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAF----SMIKDAEEKGLITPGKTVLI 74
           TP+ Y   + +   A +  K E ++   S K R A+    S+ ++   +G++        
Sbjct: 23  TPLEYSRTLSELTGAEVYLKCENLQRTGSFKIRGAYNKIASLSEEERARGVVA------- 75

Query: 75  ECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
             ++GN   G+A +AA+  G K  +VMP    L K    ++YGA+++L       DE   
Sbjct: 76  -ASAGNHAQGVA-YAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGD--VYDEALA 131

Query: 134 IVEELLNKIPTSFNPHQFKNPANPKTHYE------TTGPEIWEGTRGQVDIFVSGIGTGG 187
             +EL  +   +F  H F          +      T G EI E     VD  V  IG GG
Sbjct: 132 KAQELAEETGATF-VHPFD-------DPDVIAGQGTIGLEILEDL-PDVDTVVVPIGGGG 182

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESA 214
            +SGV   +K   PE++V GV+   + 
Sbjct: 183 LISGVATAVKALRPEVRVIGVQAEGAP 209

Length = 404

>gnl|CDD|180709 PRK06815, PRK06815, hypothetical protein; Provisional

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 27/195 (13%)

Query: 30  GCKARIAAKLEMMEPCSSVKDRIAFSMIK----DAEEKGLITPGKTVLIECTSGNTGIGM 85
           GC+  +  K E ++   S K R A + ++       ++G+IT         +SGN G G+
Sbjct: 34  GCEVYL--KCEHLQHTGSFKFRGASNKLRLLNEAQRQQGVIT--------ASSGNHGQGV 83

Query: 86  ACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNKIPT 144
           A  A   G  + +  P   S  K   ++A GA++ L   +    +   R   E   K+  
Sbjct: 84  ALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDALNAELAARRAAEQQGKV-- 141

Query: 145 SFNPHQFKNPAN-PKT--HYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP 201
                 + +P N P+      T G E+ E       +FV+ +G GG +SG+  +LK  +P
Sbjct: 142 ------YISPYNDPQVIAGQGTIGMELVEQQPDLDAVFVA-VGGGGLISGIATYLKTLSP 194

Query: 202 EIKVYGVEPAESAIL 216
           + ++ G  PA S  L
Sbjct: 195 KTEIIGCWPANSPSL 209

Length = 317

>gnl|CDD|236417 PRK09224, PRK09224, threonine dehydratase; Reviewed

 Score = 50.9 bits (123), Expect = 1e-07
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 26/207 (12%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI----KDAEEKGLITPGKTVLI 74
           TP+     +      ++  K E ++P  S K R A++ +    ++   +G+IT       
Sbjct: 21  TPLEKAPKLSARLGNQVLLKREDLQPVFSFKLRGAYNKMAQLTEEQLARGVIT------- 73

Query: 75  ECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
             ++GN   G+A  +AA+ G K ++VMP      K   ++A+G +++L       DE + 
Sbjct: 74  -ASAGNHAQGVA-LSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGD--SFDEAYA 129

Query: 134 IVEELLNKIPTSFNPHQFKNP---ANPKTHYETTGPEIWEGTRGQVD-IFVSGIGTGGTV 189
              EL  +   +F  H F +P   A   T       EI +     +D +FV  +G GG +
Sbjct: 130 HAIELAEEEGLTF-IHPFDDPDVIAGQGT----IAMEILQQHPHPLDAVFVP-VGGGGLI 183

Query: 190 SGVGNFLKKKNPEIKVYGVEPAESAIL 216
           +GV  ++K+  PEIKV GVEP +SA L
Sbjct: 184 AGVAAYIKQLRPEIKVIGVEPEDSACL 210

Length = 504

>gnl|CDD|233712 TIGR02079, THD1, threonine dehydratase

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 11/203 (5%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           + E++ +TP+     + +   A I  K E ++P  S K R A++ +K   +  L      
Sbjct: 10  LKEVVPHTPLQLNERLSEKYGANIYLKREDLQPVRSYKIRGAYNFLKQLSDAQL----AK 65

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQ---LILTNAEMGI 128
            ++  ++GN   G A      G    + MPA    +K   ++ +G +   +IL       
Sbjct: 66  GVVCASAGNHAQGFAYACRHLGVHGTVFMPATTPKQKIDRVKIFGGEFIEIILVGDTF-- 123

Query: 129 DEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGT 188
           D+      E +     +F P  F +P   +    T   EI +    + D  V  +G GG 
Sbjct: 124 DQCAAAAREHVEDHGGTFIP-PFDDPRIIEGQ-GTVAAEILDQLPEKPDYVVVPVGGGGL 181

Query: 189 VSGVGNFLKKKNPEIKVYGVEPA 211
           +SG+  +L   +P+ K+ GVEP 
Sbjct: 182 ISGLTTYLAGTSPKTKIIGVEPE 204

This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been charcterized (TIGR01124 and TIGR01127). Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway [Amino acid biosynthesis, Pyruvate family]. Length = 409

>gnl|CDD|223572 COG0498, ThrC, Threonine synthase [Amino acid transport and metabolism]

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 19/133 (14%)

Query: 17  GNTPMVYLNNIVDG---CKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVL 73
           G TP+     +          +  K     P  S KDR    ++  A+E G     KT+ 
Sbjct: 75  GGTPLYKAPALAAPLGVLNDNLYVKELGHNPTGSFKDRGMTVLVSLAKELG----AKTI- 129

Query: 74  IECTSGNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQLILTNAEMGIDEEF 132
           +  +SGNTG   A +AA  G K+ ++ P   +S  K   +   GA +I       +D  F
Sbjct: 130 LCASSGNTGASAAAYAARAGLKVFVLYPKGKVSPGKLAQMLTLGAHVI------AVDGNF 183

Query: 133 ----RIVEELLNK 141
                +V+E  N+
Sbjct: 184 DDAQELVKEAANR 196

Length = 411

>gnl|CDD|180539 PRK06352, PRK06352, threonine synthase; Validated

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 19/180 (10%)

Query: 17  GNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIEC 76
           GNTP++ L N+       +  K E + P  S KDR     +  A+E+     G   +I  
Sbjct: 27  GNTPLIPLPNLSKELGVTLYGKYEGLNPTGSFKDRGMVMAVAKAKEE-----GAEAVICA 81

Query: 77  TSGNTGIGMACFAAAKGYKLILVMP-AFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIV 135
           ++GNT    A +A   G K  +V+P   ++L K      YGA +I  + +   DE  + V
Sbjct: 82  STGNTSAAAAAYATRAGLKAYIVIPEGKVALGKLAQAVMYGADII--SIQGNFDEALKSV 139

Query: 136 EELLNK----IPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSG 191
            EL       +  S NP++ +         +T   EI E      D+    +G  G +S 
Sbjct: 140 RELAETEAVTLVNSVNPYRLEGQ-------KTAAFEICEQLGSAPDVLAIPVGNAGNISA 192

Length = 351

>gnl|CDD|236013 PRK07409, PRK07409, threonine synthase; Validated

 Score = 46.7 bits (112), Expect = 3e-06
 Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 20/147 (13%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           +T   GNTP++   N+ +     +  K E + P  S KDR     +  A+E+G     K 
Sbjct: 25  VTLGEGNTPLIPAPNLSELLGVEVYVKYEGLNPTGSFKDRGMTMAVTKAKEEG----AKA 80

Query: 72  VLIECTS-GNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQA--YGAQLILTNAEMG 127
           V+  C S GNT    A +AA  G K  +++P   ++L K  + QA  YGA++I      G
Sbjct: 81  VI--CASTGNTSASAAAYAARAGLKAFVLIPEGKIALGK--LAQAVMYGAEII---QIDG 133

Query: 128 -IDEEFRIVEELLNKIP----TSFNPH 149
             D+   IV EL  K P     S NP+
Sbjct: 134 NFDDALEIVRELAEKYPVTLVNSVNPY 160

Length = 353

>gnl|CDD|107209 cd06448, L-Ser-dehyd, Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 37/203 (18%)

Query: 33  ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAK 92
             +  KLE ++P  S K R    + + + ++GL       ++  + GN G  +A   AA+
Sbjct: 16  CNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGL--NECVHVVCSSGGNAG--LAAAYAAR 71

Query: 93  GYKL--ILVMPAFMSLEKRII--LQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNP 148
              +   +V+P   S + R++  L+  GA +++       + +  + EEL    P     
Sbjct: 72  KLGVPCTIVVPE--STKPRVVEKLRDEGATVVVHGKVWW-EADNYLREELAENDPGPVYV 128

Query: 149 HQFKNPANPKTHYETTGPEIWEG-------------TRGQVDIFVSGIGTGGTVSGVGNF 195
           H F +P             IWEG             ++ +VD  V  +G GG ++G+   
Sbjct: 129 HPFDDP------------LIWEGHSSMVDEIAQQLQSQEKVDAIVCSVGGGGLLNGIVQG 176

Query: 196 LKKKNP-EIKVYGVEPAESAILN 217
           L++    +I V  VE   +  LN
Sbjct: 177 LERNGWGDIPVVAVETEGAHSLN 199

Length = 316

>gnl|CDD|235789 PRK06381, PRK06381, threonine synthase; Validated

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 34  RIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL--ITPGKTVLIECTSGNTGIGMACFAAA 91
           +I  K E   P  + KDRIA + ++ A   G   IT G       T GN G  +A FA  
Sbjct: 32  KIYLKFEGANPTGTQKDRIAEAHVRRAMRLGYSGITVG-------TCGNYGASIAYFARL 84

Query: 92  KGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
            G K ++ +P   S  +   ++ YGA++I  +
Sbjct: 85  YGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVD 116

Length = 319

>gnl|CDD|235842 PRK06608, PRK06608, threonine dehydratase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 27/213 (12%)

Query: 10  NDITELIGNTPMVY---LNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           N I + +  TP+V+   LN ++      I  K+E ++   + K R   + + + +E+G +
Sbjct: 15  NRIKQYLHLTPIVHSESLNEMLG---HEIFFKVESLQKTGAFKVRGVLNHLLELKEQGKL 71

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
            P K V    ++GN G  +A  +   G K  + +P   S  K+     YG ++ILTN   
Sbjct: 72  -PDKIV--AYSTGNHGQAVAYASKLFGIKTRIYLPLNTSKVKQQAALYYGGEVILTNTRQ 128

Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNP---ANPKTHYETTGPEIWEGTRGQVD-IFVSG 182
             +E+ +  EE        +  H   +    A   T       E  +      D IF S 
Sbjct: 129 EAEEKAKEDEE-----QGFYYIHPSDSDSTIAGAGTLCY----EALQQLGFSPDAIFAS- 178

Query: 183 IGTGGTVSGVGNFLKKK--NPEIKVYGVEPAES 213
            G GG +S  G +L K+  +P   + G EP  +
Sbjct: 179 CGGGGLIS--GTYLAKELISPTSLLIGSEPLNA 209

Length = 338

>gnl|CDD|236244 PRK08329, PRK08329, threonine synthase; Validated

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 6/95 (6%)

Query: 38  KLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLI 97
           KL+ ++P  S KDR  +  +   +E+G+      V+I+ +SGN  + +A ++ ++G K+ 
Sbjct: 77  KLDYLQPTGSFKDRGTYVTVAKLKEEGI----NEVVID-SSGNAALSLALYSLSEGIKVH 131

Query: 98  LVMPAFMSLEKRIILQAYGAQL-ILTNAEMGIDEE 131
           + +    S EK  +L   GA+L  +    M + EE
Sbjct: 132 VFVSYNASKEKISLLSRLGAELHFVEGDRMEVHEE 166

Length = 347

>gnl|CDD|180565 PRK06450, PRK06450, threonine synthase; Validated

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 13/104 (12%)

Query: 17  GNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIEC 76
           G TP++   NI          KL+ + P  S KDR + ++I    EKG+       + E 
Sbjct: 57  GRTPLIKKGNI--------WFKLDFLNPTGSYKDRGSVTLISYLAEKGI-----KQISED 103

Query: 77  TSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           +SGN G  +A + AA G ++ + +P   S  K   +++YGA+++
Sbjct: 104 SSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQIESYGAEVV 147

Length = 338

>gnl|CDD|181457 PRK08526, PRK08526, threonine dehydratase; Provisional

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 29/207 (14%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAF----SMIKDAEEKGLIT 67
           I+  +  TP  Y   +     A +  K E ++   + K R A+    ++ ++ ++ G+I 
Sbjct: 14  ISGFVNKTPFAYAPFLSKISGAEVYLKKENLQITGAYKIRGAYNKIANLSEEQKQHGVIA 73

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
                    ++GN   G+A  A   G K ++VMP    L K    +A GA++IL      
Sbjct: 74  --------ASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNY- 124

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE------TTGPEIWEGTRGQVDIFVS 181
            DE +             +         +P    E      T   E+ +     +D+ V 
Sbjct: 125 -DEAY--------AFALEYAKENNLTFIHPFEDEEVMAGQGTIALEMLDEIS-DLDMVVV 174

Query: 182 GIGTGGTVSGVGNFLKKKNPEIKVYGV 208
            +G GG +SG+ +  K+ NP IK+ GV
Sbjct: 175 PVGGGGLISGIASAAKQINPNIKIIGV 201

Length = 403

>gnl|CDD|236318 PRK08639, PRK08639, threonine dehydratase; Validated

 Score = 42.9 bits (102), Expect = 6e-05
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 163 TTGPEIWE--GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPA 211
           T   EI E     G  D     +G GG +SGV  +LK+++P+ K+ GVEPA
Sbjct: 165 TVAVEILEQLEKEGSPDYVFVPVGGGGLISGVTTYLKERSPKTKIIGVEPA 215

Length = 420

>gnl|CDD|132036 TIGR02991, ectoine_eutB, ectoine utilization protein EutB

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 15/199 (7%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK--DAEEKGLITPGKTVLIEC 76
           TP+V   ++ + C   +  KLE  +   S K R A + +      ++         ++  
Sbjct: 20  TPLVESPSLSELCGVPVHLKLEHRQTTGSFKLRGATNAVLSLSDTQRAA------GVVAA 73

Query: 77  TSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL-ILTNAEMGIDEEFRIV 135
           ++GN G  +A  AA +G +  + M   +   K   ++  GA++ I+  ++    EE   V
Sbjct: 74  STGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQDDAQEE---V 130

Query: 136 EELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNF 195
           E L+     +  P  F +P        T G E+ E       + V   G GG  SGV   
Sbjct: 131 ERLVADRGLTMLP-PFDHPDIVAGQ-GTLGLEVVEQMPDLATVLVPLSG-GGLASGVAMA 187

Query: 196 LKKKNPEIKVYGVEPAESA 214
           +K   P+ +V GV     A
Sbjct: 188 VKAARPDTRVIGVSMERGA 206

Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases. Length = 317

>gnl|CDD|235539 PRK05638, PRK05638, threonine synthase; Validated

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 24/130 (18%)

Query: 17  GNTPMVYLNNIVDGCKARIAAKL--------EMMEPCSSVKDRIAFSMIKDAEEKGLITP 68
           G TP++         +ARI+ KL        E   P  S +DR+A   +        +  
Sbjct: 65  GGTPLI---------RARISEKLGENVYIKDETRNPTGSFRDRLATVAVSYG-----LPY 110

Query: 69  GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI 128
                I  + GN    +A ++A  G +  +V+P  +   K I + A+GA++I       +
Sbjct: 111 AANGFIVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRY--GESV 168

Query: 129 DEEFRIVEEL 138
           DE     EEL
Sbjct: 169 DEAIEYAEEL 178

Length = 442

>gnl|CDD|236025 PRK07476, eutB, threonine dehydratase; Provisional

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 29/200 (14%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIA----FSMIKDAEEKGLITPGKTVLI 74
           TP+V   ++       +  KLE ++P  S K R A     S+      +G++T       
Sbjct: 20  TPLVASASLSARAGVPVWLKLETLQPTGSFKLRGATNALLSLSAQERARGVVT------- 72

Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL-ILTNAEMGIDEEFR 133
             ++GN G  +A  A A G +  + M   +   K   ++A GA++ I+  ++   D+   
Sbjct: 73  -ASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ---DDAQA 128

Query: 134 IVEEL-----LNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGT 188
            VE L     L  +P   +P              T G EI E     V   +  +  GG 
Sbjct: 129 EVERLVREEGLTMVPPFDDPRIIAGQG-------TIGLEILEALP-DVATVLVPLSGGGL 180

Query: 189 VSGVGNFLKKKNPEIKVYGV 208
            SGV   +K   P I+V GV
Sbjct: 181 ASGVAAAVKAIRPAIRVIGV 200

Length = 322

>gnl|CDD|235918 PRK07048, PRK07048, serine/threonine dehydratase; Validated

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 40/138 (28%), Positives = 57/138 (41%), Gaps = 11/138 (7%)

Query: 77  TSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEF--RI 134
           +SGN    +A  A   G    +VMP      K    + YG +++  +      EE   R+
Sbjct: 79  SSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRYTEDREEIGRRL 138

Query: 135 VEEL-LNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG 193
            EE  L  IP   +PH             T   E++E   G +D     +G GG +SG  
Sbjct: 139 AEERGLTLIPPYDHPHVIAGQG-------TAAKELFEEV-GPLDALFVCLGGGGLLSGCA 190

Query: 194 NFLKKKNPEIKVYGVEPA 211
              +  +P  KVYGVEP 
Sbjct: 191 LAARALSPGCKVYGVEPE 208

Length = 321

>gnl|CDD|235757 PRK06260, PRK06260, threonine synthase; Validated

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 35/149 (23%)

Query: 17  GNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDR---IAFSMIKDAEEKGLITPGKT 71
           G TP+    N+    G K  +  K E   P  S KDR   +  +    A E G+    KT
Sbjct: 66  GGTPLYRCPNLEKELGVK-ELYVKHEGANPTGSFKDRGMTVGVTK---ALELGV----KT 117

Query: 72  VLIECTS-GNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQA--YGAQLILTNAEMG 127
           V   C S GNT   +A +AA  G K  +++PA  ++L K  + QA  +GA+++  +    
Sbjct: 118 VA--CASTGNTSASLAAYAARAGLKCYVLLPAGKVALGK--LAQALLHGAKVLEVDGNF- 172

Query: 128 IDEEFRIVEEL--------LNKIPTSFNP 148
            D+   +V EL        LN    S NP
Sbjct: 173 -DDALDMVVELAKEGKIYLLN----SINP 196

Length = 397

>gnl|CDD|181319 PRK08246, PRK08246, threonine dehydratase; Provisional

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 51/230 (22%), Positives = 81/230 (35%), Gaps = 53/230 (23%)

Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           A A  I   I  TP++  +       A +  KLE ++   S K R AF+ +  A      
Sbjct: 12  AAAQRIAPHIRRTPVLEAD-GAGFGPAPVWLKLEHLQHTGSFKARGAFNRLLAAPV---- 66

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
            P   V+   + GN G+ +A  AAA G    + +P      K   L+A GA++++  AE 
Sbjct: 67  -PAAGVVA-ASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEY 124

Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG---------PEI--------- 168
               E                                TG         PE+         
Sbjct: 125 ADALEAAQ------------------------AFAAETGALLCHAYDQPEVLAGAGTLGL 160

Query: 169 -WEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217
             E     VD  +  +G GG ++G+  + +      +V  VEP  +  L+
Sbjct: 161 EIEEQAPGVDTVLVAVGGGGLIAGIAAWFE---GRARVVAVEPEGAPTLH 207

Length = 310

>gnl|CDD|232896 TIGR00260, thrC, threonine synthase

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 11/128 (8%)

Query: 17  GNTPMVYLNNIVDGCKA-RIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIE 75
           G TP+     +V       +        P  S KDR     +  A E G  T      + 
Sbjct: 22  GVTPLFRSPALVANVGIKNLYVLELFHNPTLSFKDRGMAVALTKALELGNDT------VL 75

Query: 76  C-TSGNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
           C ++GNTG   A +A   G K++++ PA  +SL K      Y A+++  +     D+  R
Sbjct: 76  CASTGNTGAAAAAYAGKAGVKVVILYPAGKISLGKLAQALGYNAEVVAIDGNF--DDAQR 133

Query: 134 IVEELLNK 141
           +V++L   
Sbjct: 134 LVKQLFGD 141

Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model [Amino acid biosynthesis, Aspartate family]. Length = 328

>gnl|CDD|235994 PRK07334, PRK07334, threonine dehydratase; Provisional

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 17/198 (8%)

Query: 18  NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAF---SMIKDAE-EKGLITPGKTVL 73
            TP V+   +     A +  K E ++  +S K+R A     ++ + E  +G+I       
Sbjct: 23  RTPCVHSRTLSQITGAEVWLKFENLQFTASFKERGALNKLLLLTEEERARGVIA------ 76

Query: 74  IECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
              ++GN   G+A  A   G    +VMP F    K    + +GA+++L      +DE   
Sbjct: 77  --MSAGNHAQGVAYHAQRLGIPATIVMPRFTPTVKVERTRGFGAEVVLHGE--TLDEARA 132

Query: 134 IVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG 193
              EL  +   +F  H + +PA       T   E+ E     +D  V  IG GG +SG+ 
Sbjct: 133 HARELAEEEGLTF-VHPYDDPAVIAGQ-GTVALEMLEDA-PDLDTLVVPIGGGGLISGMA 189

Query: 194 NFLKKKNPEIKVYGVEPA 211
              K   P+I++ GV+  
Sbjct: 190 TAAKALKPDIEIIGVQTE 207

Length = 403

>gnl|CDD|235699 PRK06110, PRK06110, hypothetical protein; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 12/88 (13%)

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           P    +I  T GN G  +A  A   G    +V+P   S+EK   ++A GA+LI    E G
Sbjct: 68  PRVRGVISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELI----EHG 123

Query: 128 ID------EEFRIVEEL-LNKIPTSFNP 148
            D      E  R+  E  L+ +P SF+P
Sbjct: 124 EDFQAAREEAARLAAERGLHMVP-SFHP 150

Length = 322

>gnl|CDD|181283 PRK08197, PRK08197, threonine synthase; Validated

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 11/94 (11%)

Query: 33  ARIAAKLEMMEPCSSVKDR---IAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA 89
            R+  K E + P  S K R   +  S  K+   K L  P        T+GN G   A +A
Sbjct: 95  GRLWVKDEGLNPTGSFKARGLAVGVSRAKELGVKHLAMP--------TNGNAGAAWAAYA 146

Query: 90  AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           A  G +  + MPA      R+     GA+L L +
Sbjct: 147 ARAGIRATIFMPADAPEITRLECALAGAELYLVD 180

Length = 394

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	100.0
PLN03013	429	cysteine synthase	100.0
PLN02565	322	cysteine synthase	100.0
PLN00011	323	cysteine synthase	100.0
PLN02556	368	cysteine synthase/L-3-cyanoalanine synthase	100.0
PRK11761	296	cysM cysteine synthase B; Provisional	100.0
TIGR01138	290	cysM cysteine synthase B. Alternate name: O-acetyl	100.0
TIGR01136	299	cysKM cysteine synthases. This model discriminates	100.0
COG1171	347	IlvA Threonine dehydratase [Amino acid transport a	100.0
TIGR01139	298	cysK cysteine synthase A. This model distinguishes	100.0
PRK07476	322	eutB threonine dehydratase; Provisional	100.0
PRK08526	403	threonine dehydratase; Provisional	100.0
PLN02970	328	serine racemase	100.0
PRK10717	330	cysteine synthase A; Provisional	100.0
PRK08198	404	threonine dehydratase; Provisional	100.0
PRK08638	333	threonine dehydratase; Validated	100.0
KOG1252	362	consensus Cystathionine beta-synthase and related	100.0
PRK06382	406	threonine dehydratase; Provisional	100.0
TIGR02991	317	ectoine_eutB ectoine utilization protein EutB. Mem	100.0
PRK12483	521	threonine dehydratase; Reviewed	100.0
PRK06110	322	hypothetical protein; Provisional	100.0
cd01561	291	CBS_like CBS_like: This subgroup includes Cystathi	100.0
PLN02356	423	phosphateglycerate kinase	100.0
PRK07048	321	serine/threonine dehydratase; Validated	100.0
TIGR02079	409	THD1 threonine dehydratase. This model represents	100.0
PRK07334	403	threonine dehydratase; Provisional	100.0
PRK08639	420	threonine dehydratase; Validated	100.0
cd01562	304	Thr-dehyd Threonine dehydratase: The first step in	100.0
PRK06815	317	hypothetical protein; Provisional	100.0
PRK06608	338	threonine dehydratase; Provisional	100.0
PRK06352	351	threonine synthase; Validated	100.0
TIGR01137	454	cysta_beta cystathionine beta-synthase. Members of	100.0
PLN02550	591	threonine dehydratase	100.0
cd06448	316	L-Ser-dehyd Serine dehydratase is a pyridoxal phos	100.0
cd06447	404	D-Ser-dehyd D-Serine dehydratase is a pyridoxal ph	100.0
TIGR01124	499	ilvA_2Cterm threonine ammonia-lyase, biosynthetic,	100.0
TIGR01127	380	ilvA_1Cterm threonine dehydratase, medium form. A	100.0
PRK08246	310	threonine dehydratase; Provisional	100.0
PRK06381	319	threonine synthase; Validated	100.0
PRK09224	504	threonine dehydratase; Reviewed	100.0
PRK08197	394	threonine synthase; Validated	100.0
KOG1250	457	consensus Threonine/serine dehydratases [Amino aci	100.0
PRK08813	349	threonine dehydratase; Provisional	100.0
PRK02991	441	D-serine dehydratase; Provisional	100.0
PRK07409	353	threonine synthase; Validated	100.0
PRK07591	421	threonine synthase; Validated	100.0
PRK06721	352	threonine synthase; Reviewed	100.0
TIGR02035	431	D_Ser_am_lyase D-serine ammonia-lyase. This family	100.0
PRK06450	338	threonine synthase; Validated	100.0
cd01563	324	Thr-synth_1 Threonine synthase is a pyridoxal phos	100.0
PRK05638	442	threonine synthase; Validated	100.0
PRK06260	397	threonine synthase; Validated	100.0
PLN02569	484	threonine synthase	100.0
cd00640	244	Trp-synth-beta_II Tryptophan synthase beta superfa	100.0
PRK08329	347	threonine synthase; Validated	100.0
PRK08206	399	diaminopropionate ammonia-lyase; Provisional	100.0
KOG1251	323	consensus Serine racemase [Signal transduction mec	100.0
TIGR00260	328	thrC threonine synthase. Involved in threonine bio	100.0
TIGR01747	376	diampropi_NH3ly diaminopropionate ammonia-lyase fa	100.0
KOG1481	391	consensus Cysteine synthase [Amino acid transport	100.0
PRK13028	402	tryptophan synthase subunit beta; Provisional	100.0
TIGR01415	419	trpB_rel pyridoxal-phosphate dependent TrpB-like e	100.0
TIGR03528	396	2_3_DAP_am_ly diaminopropionate ammonia-lyase. Mem	100.0
PRK03910	331	D-cysteine desulfhydrase; Validated	100.0
TIGR01275	311	ACC_deam_rel pyridoxal phosphate-dependent enzymes	100.0
PRK04346	397	tryptophan synthase subunit beta; Validated	100.0
PRK12391	427	tryptophan synthase subunit beta; Reviewed	100.0
PLN02618	410	tryptophan synthase, beta chain	100.0
TIGR00263	385	trpB tryptophan synthase, beta subunit. Tryptophan	100.0
PRK13802	695	bifunctional indole-3-glycerol phosphate synthase/	100.0
cd06446	365	Trp-synth_B Tryptophan synthase-beta: Trptophan sy	100.0
PF00291	306	PALP: Pyridoxal-phosphate dependent enzyme; InterP	100.0
cd06449	307	ACCD Aminocyclopropane-1-carboxylate deaminase (AC	100.0
TIGR01274	337	ACC_deam 1-aminocyclopropane-1-carboxylate deamina	100.0
PRK12390	337	1-aminocyclopropane-1-carboxylate deaminase; Provi	100.0
PRK14045	329	1-aminocyclopropane-1-carboxylate deaminase; Provi	100.0
TIGR03844	398	cysteate_syn cysteate synthase. Members of this fa	100.0
PRK13803	610	bifunctional phosphoribosylanthranilate isomerase/	100.0
COG0498	411	ThrC Threonine synthase [Amino acid transport and	100.0
COG0133	396	TrpB Tryptophan synthase beta chain [Amino acid tr	99.97
COG2515	323	Acd 1-aminocyclopropane-1-carboxylate deaminase [A	99.96
PRK09225	462	threonine synthase; Validated	99.93
cd01560	460	Thr-synth_2 Threonine synthase catalyzes the final	99.93
COG1350	432	Predicted alternative tryptophan synthase beta-sub	99.93
KOG1395	477	consensus Tryptophan synthase beta chain [Amino ac	99.92
COG3048	443	DsdA D-serine dehydratase [Amino acid transport an	99.82
PF03808	172	Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp	93.43
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	92.62
cd06533	171	Glyco_transf_WecG_TagA The glycosyltransferase Wec	91.42
PRK12743	256	oxidoreductase; Provisional	90.86
PF07279	218	DUF1442: Protein of unknown function (DUF1442); In	90.77
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	90.18
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	90.13
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	89.99
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	89.46
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	89.25
COG0800	211	Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Ca	89.1
PRK08226	263	short chain dehydrogenase; Provisional	88.93
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	88.9
PRK08862	227	short chain dehydrogenase; Provisional	88.88
PRK06139	330	short chain dehydrogenase; Provisional	88.52
PRK08628	258	short chain dehydrogenase; Provisional	88.39
TIGR00696	177	wecB_tagA_cpsF bacterial polymer biosynthesis prot	88.11
TIGR01064	473	pyruv_kin pyruvate kinase. This enzyme is a homote	87.92
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	87.91
PRK07478	254	short chain dehydrogenase; Provisional	87.86
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	87.62
PRK08643	256	acetoin reductase; Validated	87.58
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	87.47
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	87.26
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	86.3
PRK07523	255	gluconate 5-dehydrogenase; Provisional	86.16
PRK05866	293	short chain dehydrogenase; Provisional	85.97
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	85.54
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	85.36
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	85.28
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	85.23
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	85.17
PRK15408	336	autoinducer 2-binding protein lsrB; Provisional	85.06
PRK06194	287	hypothetical protein; Provisional	84.85
PF00764	388	Arginosuc_synth: Arginosuccinate synthase; InterPr	84.65
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	84.56
PRK03562	621	glutathione-regulated potassium-efflux system prot	84.39
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	84.11
PRK12938	246	acetyacetyl-CoA reductase; Provisional	84.08
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	83.87
PRK07791	286	short chain dehydrogenase; Provisional	83.79
PRK08278	273	short chain dehydrogenase; Provisional	83.75
PRK05993	277	short chain dehydrogenase; Provisional	83.44
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	83.26
PRK03659	601	glutathione-regulated potassium-efflux system prot	83.23
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	83.13
PRK08303	305	short chain dehydrogenase; Provisional	83.09
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	83.08
TIGR00670	301	asp_carb_tr aspartate carbamoyltransferase. Ornith	82.59
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	82.54
PRK06181	263	short chain dehydrogenase; Provisional	82.54
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	82.51
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	82.3
PRK05854	313	short chain dehydrogenase; Provisional	82.18
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	81.84
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	81.76
PRK06182	273	short chain dehydrogenase; Validated	81.74
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	81.58
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	81.46
PRK06701	290	short chain dehydrogenase; Provisional	81.36
PRK08703	239	short chain dehydrogenase; Provisional	81.22
PRK07806	248	short chain dehydrogenase; Provisional	81.08
PRK10669	558	putative cation:proton antiport protein; Provision	81.04
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	80.95
PRK07774	250	short chain dehydrogenase; Provisional	80.67
PRK07062	265	short chain dehydrogenase; Provisional	80.29
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	80.12

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.2e-56  Score=369.18  Aligned_cols=210  Identities=53%  Similarity=0.894  Sum_probs=199.6

Q ss_pred             hHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF   88 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~   88 (221)
                      ++.+.+.+++|||++++++....+++||+|+|++||+||.|||.|++|+.+|+++|.+.||.+ ||++||||+|.+||++
T Consensus         2 ~~~~~~~iG~TPlvrL~~~~~~~~~~i~~KlE~~NP~gSvKDR~A~~mI~~Ae~~G~l~pG~t-IVE~TSGNTGI~LA~v   80 (300)
T COG0031           2 YESILDLIGNTPLVRLNRLSPGTGVEIYAKLESFNPGGSVKDRIALYMIEDAEKRGLLKPGGT-IVEATSGNTGIALAMV   80 (300)
T ss_pred             ccchHHHhCCCCcEeecccCCCCCceEEEEhhhcCCCCchhHHHHHHHHHHHHHcCCCCCCCE-EEEcCCChHHHHHHHH
Confidence            456788899999999999988888999999999999999999999999999999999999974 9999999999999999


Q ss_pred             HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHhhCCC-eeecCCCCCCccHHHHHhhHHH
Q 043209           89 AAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG-IDEEFRIVEELLNKIPT-SFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~-~~~~~~~a~~~~~~~~~-~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      |+.+|+++++|||++.+.++++.|+++||+|+.++...+ +..+.+++++++++.|+ .+|++||+||+|+++||.++++
T Consensus        81 aa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~aH~~tT~~  160 (300)
T COG0031          81 AAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHYETTGP  160 (300)
T ss_pred             HHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCCceEchhhcCCCccHHHHHhhhHH
Confidence            999999999999999999999999999999999998444 78899999999999988 7888899999999999999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      ||++|+++.+|++|+++|||||++|++++||+.+|++|+++|||++|+.+++|
T Consensus       161 EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G  213 (300)
T COG0031         161 EIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAVDPEGSVLLSGG  213 (300)
T ss_pred             HHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEECCCCCcccCCC
Confidence            99999988899999999999999999999999999999999999999999866

>PLN03013 cysteine synthase

Probab=100.00  E-value=5.3e-55  Score=382.33  Aligned_cols=214  Identities=62%  Similarity=1.094  Sum_probs=201.2

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      ++++++.+.+++|||++++.+++..+++||+|+|++|||||||||+|.+++..+++.|.+.+|..+||++|+||||.|+|
T Consensus       112 ~~~~~i~~~iG~TPLv~l~~l~~~~g~~Iy~KlE~lNPtGSfKdR~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA  191 (429)
T PLN03013        112 NIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLA  191 (429)
T ss_pred             HHHHHHHhcCCCCCeEECcccccccCCeEEEEeccCCCccccHHHHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHH
Confidence            36788999999999999999988778899999999999999999999999999999999889866799999999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++|+.+|++++||||+.++..|++.++.+||+|+.+++..+++++++.+++++++.++++|++||+|+.++++||.|+|+
T Consensus       192 ~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~~~~g~~~~~qy~Np~n~~ah~~ttg~  271 (429)
T PLN03013        192 FIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGP  271 (429)
T ss_pred             HHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhhcCCeEeCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987655678899999998887689999999999999889999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      ||++|+++++|+||+|+||||+++|++++||+.+|++|||||||++|+.+.+|.
T Consensus       272 EI~eq~~~~~D~vV~~vGtGGtisGiar~lKe~~P~vkVigVep~gs~~l~~g~  325 (429)
T PLN03013        272 EIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK  325 (429)
T ss_pred             HHHHhcCCCCCEEEEeCCccHHHHHHHHHHHhhCCCCEEEEEEeCCCchhhCCC
Confidence            999999778999999999999999999999999999999999999999886654

>PLN02565 cysteine synthase

Probab=100.00  E-value=1.1e-54  Score=372.34  Aligned_cols=214  Identities=71%  Similarity=1.153  Sum_probs=198.3

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      ..++.++..+++|||++++.++...+.+||+|+|++|||||||||+|.+++..+.+.|.+.+|.+.||++|+||||.|+|
T Consensus         4 ~~~~~~~~~ig~TPLv~l~~l~~~~~~~i~~K~E~~nPtGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA   83 (322)
T PLN02565          4 SIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLA   83 (322)
T ss_pred             hhhhhHHHHhCCCceEEccccCCCCCceEEEEecccCCccchHHHHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHH
Confidence            45677899999999999988776667899999999999999999999999999999998888867799999999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++|+.+|++|+||||++++..|++.++.+||+|+.+++..+++++.+.+++++++.++.+|++||+|+.|+.+||.|+|+
T Consensus        84 ~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~q~~n~~n~~~~~~t~a~  163 (322)
T PLN02565         84 FMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGP  163 (322)
T ss_pred             HHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCCCcEeecccCCHhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987645678889999998876678999999999998889999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      ||++|+++++|+||+|+|+||+++|++.+||+.+|++|||+|||++|+++.+|.
T Consensus       164 Ei~~q~~~~~d~vv~~vG~GG~l~Gi~~~lk~~~p~~kvi~Vep~~s~~~~~g~  217 (322)
T PLN02565        164 EIWKGTGGKVDAFVSGIGTGGTITGAGKYLKEQNPDIKLYGVEPVESAVLSGGK  217 (322)
T ss_pred             HHHHhcCCCCCEEEEcCCchHHHHHHHHHHHHhCCCCEEEEEecCCCccccCCC
Confidence            999999767999999999999999999999999999999999999999987654

>PLN00011 cysteine synthase

Probab=100.00  E-value=1.4e-53  Score=366.14  Aligned_cols=219  Identities=68%  Similarity=1.124  Sum_probs=202.4

Q ss_pred             CccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChH
Q 043209            2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNT   81 (221)
Q Consensus         2 ~~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~   81 (221)
                      |++.+..++.+...+++|||+++++++...|.+||+|+|++|||||||||++++++..++++|.+.|+.++||++|+|||
T Consensus         1 ~~~~~~~~~~~~~~~g~TPl~~l~~l~~~~g~~i~~K~E~~nPtGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~aSsGN~   80 (323)
T PLN00011          1 MEDRCLIKNDVTELIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKSTLIEATAGNT   80 (323)
T ss_pred             CcchhhHHhhHHHHhCCCceEEccccCCCCCceEEEEecccCCccccchHHHHHHHHHHHHcCCCCCCCcEEEEeCCChH
Confidence            67888899999999999999999998876678999999999999999999999999999999998888667999999999


Q ss_pred             HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209           82 GIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHY  161 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  161 (221)
                      |+|+|++|+.+|++|+||||..++..|++.++.+||+|+.++.+.+.+++++.+++++++.++++|++||+|+.++..||
T Consensus        81 g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~n~~~~~  160 (323)
T PLN00011         81 GIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQSIGLKGMLEKAEEILSKTPGGYIPQQFENPANPEIHY  160 (323)
T ss_pred             HHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCeEEeccccCCccHHHHH
Confidence            99999999999999999999999999999999999999999876444567788888888766789999999999988799


Q ss_pred             hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      .++++||++|+.+++|+||+|+|+|||++|++.+||+.+|++|||||||++++++.++.
T Consensus       161 ~t~~~EI~~q~~~~~D~iv~~vGtGGt~aGi~~~lk~~~~~~kvigVe~~~~~~~~~~~  219 (323)
T PLN00011        161 RTTGPEIWRDSAGKVDILVAGVGTGGTATGVGKFLKEKNKDIKVCVVEPVESAVLSGGQ  219 (323)
T ss_pred             HHHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHhhCCCCEEEEEecCCCcccCCCC
Confidence            99999999999668999999999999999999999999999999999999999887653

>PLN02556 cysteine synthase/L-3-cyanoalanine synthase

Probab=100.00  E-value=1e-53  Score=371.47  Aligned_cols=214  Identities=61%  Similarity=1.009  Sum_probs=199.9

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      ++.+++...+++|||+++++++...|++||+|+|++||+||||||++++++.+++++|.+.||.++||++|+||||+|+|
T Consensus        48 ~~~~~v~~~ig~TPl~~l~~l~~~~g~~I~~KlE~~nPtGS~KdR~A~~~l~~a~~~G~i~pG~~~vV~aSsGN~G~alA  127 (368)
T PLN02556         48 KIKTDASQLIGKTPLVYLNKVTEGCGAYIAAKQEMFQPTSSIKDRPALAMIEDAEKKNLITPGKTTLIEPTSGNMGISLA  127 (368)
T ss_pred             hhhhhHHHhcCCCccEEccccccccCCEEEEEecccCCccchHHHHHHHHHHHHHHcCCcCCCCCEEEEeCCchHHHHHH
Confidence            35678899999999999999988788999999999999999999999999999999999999987899999999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++|+.+|++|+||||+.++..|++.++.+||+|+.+++..++..+++.+++++++.++++|++||+|+.++++||.++++
T Consensus       128 ~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~~~~~~q~~np~~~~~g~~ttg~  207 (368)
T PLN02556        128 FMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLESTPDAFMLQQFSNPANTQVHFETTGP  207 (368)
T ss_pred             HHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHHhcCCCCccCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999986544567888898888887789999999999999789999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      ||++|+.+.+|+||+|+|||||++|++.+||+.+|++|||||||++++.+.+|.
T Consensus       208 EI~eq~~~~~D~vV~~vGtGGt~aGv~~~lk~~~p~~kVigVep~~~~~~~~g~  261 (368)
T PLN02556        208 EIWEDTLGQVDIFVMGIGSGGTVSGVGKYLKSKNPNVKIYGVEPAESNVLNGGK  261 (368)
T ss_pred             HHHHhcCCCCCEEEEcCCcchHHHHHHHHHHHhCCCCEEEEEeeCCCccccCCC
Confidence            999998668999999999999999999999999999999999999998887664

>PRK11761 cysM cysteine synthase B; Provisional

Probab=100.00  E-value=1.6e-53  Score=361.59  Aligned_cols=209  Identities=45%  Similarity=0.733  Sum_probs=194.4

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +++++...+++|||+++++|+...|++||+|+|++|||||||||++.+++.+++++|.+.++. +||++|+||||.|+|+
T Consensus         2 ~~~~i~~~~g~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~~~~a~~~g~~~~g~-~vv~aSsGN~g~alA~   80 (296)
T PRK11761          2 AYPTLEDTIGNTPLVKLQRLPPDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPGD-TLIEATSGNTGIALAM   80 (296)
T ss_pred             ccccHHHhcCCCceEeccccccCCCCEEEEEEcccCCCCCchhHHHHHHHHHHHHcCCCCCCC-EEEEeCCChHHHHHHH
Confidence            467788899999999999998888899999999999999999999999999999999877774 4999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE  167 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  167 (221)
                      +|+.+|++|+||||+..+..|++.++.+||+|+.++...+++++.+.+++++++. +++|++||+|+.++..||.|+++|
T Consensus        81 ~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~~~~t~~~E  159 (296)
T PRK11761         81 IAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGARDLALQMQAEG-EGKVLDQFANPDNPLAHYETTGPE  159 (296)
T ss_pred             HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHhcc-CCEecCCCCChhhHHHHhhchHHH
Confidence            9999999999999999999999999999999999997545888888999998886 789999999999988789999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      |++|+++.+|+||+|+|+||+++|++.+||+.+|++|||||||++++++.|
T Consensus       160 i~eq~~~~~d~iv~~vG~Gg~~~Gi~~~lk~~~~~~kvigVep~~~~~i~g  210 (296)
T PRK11761        160 IWRQTEGRITHFVSSMGTTGTIMGVSRYLKEQNPAVQIVGLQPEEGSSIPG  210 (296)
T ss_pred             HHHhcCCCCCEEEecCCcHHHHHHHHHHHHHhCCCCEEEEEecCCCCcCcC
Confidence            999997679999999999999999999999999999999999999888753

>TIGR01138 cysM cysteine synthase B

Probab=100.00  E-value=2.8e-52  Score=353.19  Aligned_cols=205  Identities=46%  Similarity=0.753  Sum_probs=190.2

Q ss_pred             hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      +...+++|||++++++++..|.+||+|+|++|||||||||++.+++..++++|.+.++. +||++|+||||.|+|++|+.
T Consensus         2 i~~~ig~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~~g~-~vv~aSsGN~g~alA~~a~~   80 (290)
T TIGR01138         2 IEQTVGNTPLVRLQRMGPENGSEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAAL   80 (290)
T ss_pred             hHHhCCCCceEEccccccCCCCeEEEEEccCCCCccHHHHHHHHHHHHHHHcCCCCCCC-EEEEECCChHHHHHHHHHHH
Confidence            45678999999999999888899999999999999999999999999999999877775 49999999999999999999


Q ss_pred             cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209           92 KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEG  171 (221)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  171 (221)
                      +|++|+||+|++.+..|++.++.+||+|+.++.+.+++++.+.+++++++. +.+|++||+|+.++.+||.++++||++|
T Consensus        81 ~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~~~~~~~~~~~t~~~Ei~~q  159 (290)
T TIGR01138        81 KGYRMKLLMPDNMSQERKAAMRAYGAELILVTKEEGMEGARDLALELANRG-EGKLLDQFNNPDNPYAHYTSTGPEIWQQ  159 (290)
T ss_pred             cCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC-CCCCCCccCCcccHHHHhHhHHHHHHHH
Confidence            999999999999999999999999999999987545788889999998887 4568999999999987899999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       172 ~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      +++++|+||+|+||||+++|++.+||+.+|++|||+|||++++.+.+
T Consensus       160 ~~~~~d~iv~~vG~Gg~~~Gv~~~lk~~~~~~kvi~Vep~~~~~~~g  206 (290)
T TIGR01138       160 TGGRITHFVSSMGTTGTIMGVSRFLKEQNPPVQIVGLQPEEGSSIPG  206 (290)
T ss_pred             cCCCCCEEEECCCchHHHHHHHHHHHHhCCCCEEEEEeCCCCCCccC
Confidence            97689999999999999999999999999999999999999887754

Alternate name: O-acetylserine (thiol)-lyase

>TIGR01136 cysKM cysteine synthases

Probab=100.00  E-value=7.6e-52  Score=352.21  Aligned_cols=206  Identities=60%  Similarity=0.974  Sum_probs=191.4

Q ss_pred             hcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc
Q 043209           13 TELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAK   92 (221)
Q Consensus        13 ~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~   92 (221)
                      ...+++|||+++++|++..|.+||+|+|++|||||||+|++.+++..++++|.+.++. +|+++|+||||+|+|++|+.+
T Consensus         2 ~~~vg~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g~-~vv~aSsGN~g~alA~~a~~~   80 (299)
T TIGR01136         2 EELIGNTPLVRLNRLAPGCDARVLAKLEGRNPSGSVKDRIALSMIEDAEKRGLLKPGD-TIIEATSGNTGIALAMVAAAK   80 (299)
T ss_pred             ccccCCCceEEccccCCCCCceEEEEEcccCCCCCccHHHHHHHHHHHHHcCCCCCCC-EEEEeCCChHHHHHHHHHHHc
Confidence            4568999999999999888899999999999999999999999999999999777764 499999999999999999999


Q ss_pred             CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhh
Q 043209           93 GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGT  172 (221)
Q Consensus        93 g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~  172 (221)
                      |++|+||||++.+..|++.++.+||+|+.++.+.+++++.+.+++++++.++++++++|+|+.++..||.++++||++|+
T Consensus        81 G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ql  160 (299)
T TIGR01136        81 GYKLILTMPETMSLERRKLLRAYGAELILTPAEEGMKGAIDKAEELAAETNKYVMLDQFENPANPEAHYKTTGPEIWRDT  160 (299)
T ss_pred             CCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHhhCCCeEecCCCCCchhHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999987645788999999998886568899999999987679999999999999


Q ss_pred             CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          173 RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       173 ~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      +++||+||+|+|+||+++|++.+|++.+|.+|||+|||++++++.++
T Consensus       161 ~~~~d~iv~~vG~Gg~~~G~~~~~~~~~~~~~vi~Ve~~~~~~~~~~  207 (299)
T TIGR01136       161 DGRIDHFVAGVGTGGTITGVGRYLKEQNPNIKIVAVEPAESPVLSGG  207 (299)
T ss_pred             CCCCCEEEEcCchhHHHHHHHHHHHHhCCCCEEEEEecCCCccccCC
Confidence            76799999999999999999999999999999999999999998764

This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.

>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-52  Score=355.07  Aligned_cols=208  Identities=28%  Similarity=0.351  Sum_probs=193.5

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      .+..++.++...+.+|||.+++.|++.+|++||+|+|++||+||||.|+|++.+..+.+++..   +..||++|+|||++
T Consensus        11 ~i~~A~~ri~~~~~~TPL~~s~~Ls~~~g~~v~lK~E~lQ~~gSFK~RGA~n~i~~Ls~e~~~---~~gViaaSaGNHaQ   87 (347)
T COG1171          11 DILAAAARLKGVVNPTPLQRSPSLSERLGAEIYLKRENLQPVGSFKIRGAYNKLSSLSEEEER---AAGVIAASAGNHAQ   87 (347)
T ss_pred             HHHHHHHHHhCcccCCCcccchhhHHhhCceEEEeeccCcccccchhhhHHHHHHhcChhhhh---cCceEEecCCcHHH
Confidence            455678899999999999999999999999999999999999999999999999987534221   44599999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      ++|++|+++|++++||||.+++..|++..+.+|++|++++.+  |+++.+.++++++++ |+.|+++||+|+.+. ||+|
T Consensus        88 GvA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~GaeVil~g~~--~dda~~~a~~~a~~~-G~~~i~pfD~p~viA-GQGT  163 (347)
T COG1171          88 GVAYAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGDN--FDDAYAAAEELAEEE-GLTFVPPFDDPDVIA-GQGT  163 (347)
T ss_pred             HHHHHHHHhCCCEEEEecCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHHc-CCEEeCCCCCcceee-cccH
Confidence            999999999999999999999999999999999999999997  999999999999998 999999999999995 9999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      ++.||++|++..+|+||||+|+||+++|++.++|...|++|||||||+++++|..
T Consensus       164 i~lEileq~~~~~d~v~vpvGGGGLisGia~~~k~~~p~~~vIGVEp~~a~~~~~  218 (347)
T COG1171         164 IALEILEQLPDLPDAVFVPVGGGGLISGIATALKALSPEIKVIGVEPEGAPSMYA  218 (347)
T ss_pred             HHHHHHHhccccCCEEEEecCccHHHHHHHHHHHHhCCCCeEEEEeeCCChHHHH
Confidence            9999999996557999999999999999999999999999999999999998753

>TIGR01139 cysK cysteine synthase A

Probab=100.00  E-value=3.1e-51  Score=348.35  Aligned_cols=205  Identities=56%  Similarity=0.943  Sum_probs=187.1

Q ss_pred             hcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc
Q 043209           13 TELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAK   92 (221)
Q Consensus        13 ~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~   92 (221)
                      ...+++|||+++++ ....|.+||+|+|++|||||||||++.+++..++++|.+.+|. +|+++|+||||+|+|++|+++
T Consensus         2 ~~~~g~TPl~~~~~-~~~~g~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~-~vv~aSsGN~g~alA~~a~~~   79 (298)
T TIGR01139         2 SELIGNTPLVRLNR-IEGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPGK-TIVEPTSGNTGIALAMVAAAR   79 (298)
T ss_pred             ccccCCCceEEccc-cCCCCceEEEEEcccCCCCcchHHHHHHHHHHHHHcCCCCCCC-EEEEeCCChhHHHHHHHHHHc
Confidence            45789999999988 4567889999999999999999999999999999999777764 499999999999999999999


Q ss_pred             CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCC-eeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209           93 GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPT-SFNPHQFKNPANPKTHYETTGPEIWEG  171 (221)
Q Consensus        93 g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~n~~~~~~g~~t~~~Ei~~q  171 (221)
                      |++|+||+|++++..+++.++.+||+|+.++.+.+++++.+.+++++++.++ +++++||+|+.++.+||.++++||++|
T Consensus        80 Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  159 (298)
T TIGR01139        80 GYKLILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGAIAKAEEIAASTPNSYFMLQQFENPANPEIHRKTTGPEIWRD  159 (298)
T ss_pred             CCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEcccccCCcccHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999864446788899999888744 558999999998778999999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       172 ~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      ++..||+||+|+|+||+++|++.+|++.+|++|||+|||+++++++++
T Consensus       160 ~~~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~vi~Ve~~~~~~~~~~  207 (298)
T TIGR01139       160 TDGKLDAFVAGVGTGGTITGVGEVLKEQKPNIKIVAVEPAESPVLSGG  207 (298)
T ss_pred             hCCCCCEEEEecchhHhHHHHHHHHHhcCCCCEEEEEecCCCcccCCC
Confidence            976799999999999999999999999999999999999999888754

This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.

>PRK07476 eutB threonine dehydratase; Provisional

Probab=100.00  E-value=1.7e-51  Score=353.21  Aligned_cols=206  Identities=23%  Similarity=0.288  Sum_probs=191.8

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      .+|..++.++...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.+.+.    .++||++|+||||
T Consensus         4 ~~i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~i~~a~~~~~----~~gvv~aSsGN~g   79 (322)
T PRK07476          4 ADIYRARRRIAGRVRRTPLVASASLSARAGVPVWLKLETLQPTGSFKLRGATNALLSLSAQER----ARGVVTASTGNHG   79 (322)
T ss_pred             HHHHHHHHHHhCCCCCCCceechhhHHhhCCeEEEEEccCCCCCCchHHHHHHHHHhhhhhhh----CCeEEEECCChHH
Confidence            356778999999999999999999998889999999999999999999999999999998875    3349999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++|++|+.+++ |+.
T Consensus        80 ~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~n~~~~~-g~~  155 (322)
T PRK07476         80 RALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS--QDDAQAEVERLVREE-GLTMVPPFDDPRIIA-GQG  155 (322)
T ss_pred             HHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcceee-chh
Confidence            9999999999999999999999999999999999999999875  788999999998887 789999999999996 899


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      ++++||++|++ ++|+||+|+|+||+++|++.+||..+|++|||+|||++++++.
T Consensus       156 t~~~Ei~~Q~~-~~d~iv~~vG~GG~~~Gv~~~~k~~~~~~~vigVe~~~~~~~~  209 (322)
T PRK07476        156 TIGLEILEALP-DVATVLVPLSGGGLASGVAAAVKAIRPAIRVIGVSMERGAAMH  209 (322)
T ss_pred             HHHHHHHHhCc-CCCEEEEEcChHHHHHHHHHHHHHhCCCCEEEEEEECCchHHH
Confidence            99999999994 7999999999999999999999999999999999999887653

>PRK08526 threonine dehydratase; Provisional

Probab=100.00  E-value=2.5e-51  Score=360.60  Aligned_cols=206  Identities=25%  Similarity=0.331  Sum_probs=192.4

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      ++|..+++++.+.+++|||+++++|++..|++||+|+|++|||||||+|++.+.+..+.+.+.    .++||++|+||||
T Consensus         5 ~~i~~a~~~i~~~i~~TPl~~~~~Ls~~~g~~iylK~E~lqptGSfK~RgA~n~i~~l~~~~~----~~gVV~aSaGNhg   80 (403)
T PRK08526          5 NKIYQAKQRISGFVNKTPFAYAPFLSKISGAEVYLKKENLQITGAYKIRGAYNKIANLSEEQK----QHGVIAASAGNHA   80 (403)
T ss_pred             HHHHHHHHHHhCcCCCCCccchHHHHHHhCCeEEEEecCCCCCCCCHHHHHHHHHHhccHhhc----CCEEEEECccHHH
Confidence            567788999999999999999999999889999999999999999999999999998876543    3559999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +++|++|+.+|++|+||||..++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.++. ||+
T Consensus        81 ~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~--~~~a~~~a~~~a~~~-g~~~v~p~~~~~~i~-G~g  156 (403)
T PRK08526         81 QGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDN--YDEAYAFALEYAKEN-NLTFIHPFEDEEVMA-GQG  156 (403)
T ss_pred             HHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEeeCCCCCHHHHh-hhH
Confidence            9999999999999999999999999999999999999999864  899999999998887 799999999998875 999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |+|.||++|+ +++|+||+|+|+||+++|++.++|..+|++|||||||+++++|.
T Consensus       157 tia~EI~eq~-~~~D~vvvpvGgGGl~aGia~~~k~~~p~~kvigVep~~~~~~~  210 (403)
T PRK08526        157 TIALEMLDEI-SDLDMVVVPVGGGGLISGIASAAKQINPNIKIIGVGAKGAPAMY  210 (403)
T ss_pred             HHHHHHHHhc-CCCCEEEEecChHHHHHHHHHHHHHhCCCCEEEEEEECCCChHH
Confidence            9999999999 47999999999999999999999999999999999999999873

>PLN02970 serine racemase

Probab=100.00  E-value=4.8e-51  Score=351.07  Aligned_cols=205  Identities=18%  Similarity=0.214  Sum_probs=189.8

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      ++..+++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++..+.+++.    .++||++|+||||.
T Consensus        13 ~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~nptGSfKdRga~~~i~~~~~~~~----~~~vv~aSsGN~g~   88 (328)
T PLN02970         13 SIREARKRIAPFIHRTPVLTSSSLDALAGRSLFFKCECFQKGGAFKFRGACNAIFSLSDDQA----EKGVVTHSSGNHAA   88 (328)
T ss_pred             HHHHHHHHHhCcCCCCCeeechhhHHhhCCeEEEEecCCCCCCCcHHHHHHHHHHHhhHhhc----CCeEEEECCcHHHH
Confidence            45567788999999999999999998888999999999999999999999999999875553    34599999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      |+|++|+.+|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+++ ||.|
T Consensus        89 alA~~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~~--~~~~~~~a~~la~~~-g~~~~~~~~n~~~~~-g~~t  164 (328)
T PLN02970         89 ALALAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEPT--VESREAVAARVQQET-GAVLIHPYNDGRVIS-GQGT  164 (328)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcchhh-ehHH
Confidence            999999999999999999999999999999999999999975  888889999998875 899999999999887 8999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      +++||++|++ .||+||+|+|+||+++|++.+||+.+|++|||+|||++++++.
T Consensus       165 ~g~Ei~~ql~-~~D~vv~~vG~GG~~~Gi~~~lk~~~~~~kvi~Vep~~~~~~~  217 (328)
T PLN02970        165 IALEFLEQVP-ELDVIIVPISGGGLISGIALAAKAIKPSIKIIAAEPKGADDAA  217 (328)
T ss_pred             HHHHHHHhcc-CCCEEEEeeCchHHHHHHHHHHHhcCCCCEEEEEEECCCcHHH
Confidence            9999999995 6999999999999999999999999999999999999998764

>PRK10717 cysteine synthase A; Provisional

Probab=100.00  E-value=1.9e-50  Score=347.88  Aligned_cols=207  Identities=47%  Similarity=0.770  Sum_probs=184.7

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +++.+.+.+++|||++++++++.+|++||+|+|++|||||||+|++.+++.+++++|.+.++. +||++|+||||+|+|+
T Consensus         3 ~~~~~~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~nptGS~K~Rga~~~v~~a~~~g~~~~g~-~vv~aSsGN~g~alA~   81 (330)
T PRK10717          3 IFEDVSDTIGNTPLIRLNRASEATGCEILGKAEFLNPGGSVKDRAALNIIWDAEKRGLLKPGG-TIVEGTAGNTGIGLAL   81 (330)
T ss_pred             hhhhHHHHhCCCceEEccccCCCCCCeEEEEeeccCCCCCchHHHHHHHHHHHHHcCCCCCCC-EEEEeCCcHHHHHHHH
Confidence            477889999999999999999988999999999999999999999999999999999877764 4999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC------ChhHHHHHHHHHHhhC-CCeeecCCCCCCccHHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM------GIDEEFRIVEELLNKI-PTSFNPHQFKNPANPKTH  160 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~------~~~~~~~~a~~~~~~~-~~~~~~~~~~n~~~~~~g  160 (221)
                      +|+.+|++|+||+|...+..+++.++.+||+|+.++...      ..+.+.+.++++.++. .+++|++||+||.++..|
T Consensus        82 ~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g  161 (330)
T PRK10717         82 VAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAAPYANPNNYVKGAGRLAEELVASEPNGAIWANQFDNPANREAH  161 (330)
T ss_pred             HHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCcccccccchHHHHHHHHHHHHhhCCCCeEecCCCCChhhHHHH
Confidence            999999999999999999999999999999999998631      1122344444554443 278999999999988779


Q ss_pred             HhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCcc
Q 043209          161 YETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAI  215 (221)
Q Consensus       161 ~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~  215 (221)
                      |.+++.||++|++.++|+||+|+|+||+++|++.+|++.+|++|||+|||++++.
T Consensus       162 ~~t~a~Ei~~ql~~~~d~iv~~vG~GG~~~Gi~~~~k~~~~~~~vi~Vep~~~~~  216 (330)
T PRK10717        162 YETTGPEIWEQTDGKVDGFVCAVGTGGTLAGVSRYLKETNPKVKIVLADPTGSAL  216 (330)
T ss_pred             HHhHHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEcCCCCcc
Confidence            9999999999997679999999999999999999999999999999999999853

>PRK08198 threonine dehydratase; Provisional

Probab=100.00  E-value=5.6e-51  Score=359.94  Aligned_cols=206  Identities=27%  Similarity=0.379  Sum_probs=192.0

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      +++..+++++...+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.+++.    .++||++|+||||
T Consensus         7 ~~i~~a~~~i~~~i~~TPl~~~~~ls~~~g~~i~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g   82 (404)
T PRK08198          7 DDIEEARERLKGVVRRTPLEYSRTLSELTGAEVYLKCENLQRTGSFKIRGAYNKIASLSEEER----ARGVVAASAGNHA   82 (404)
T ss_pred             HHHHHHHHHHhccCCCCCceehhhHHHHhCCEEEEEECCCCCCCCCHHHHHHHHHHhccHhhc----CCEEEEECCCHHH
Confidence            356678899999999999999999998889999999999999999999999999999875543    4569999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +++|++|+.+|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+++ ||.
T Consensus        83 ~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~~~~~~~-g~~  158 (404)
T PRK08198         83 QGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDV--YDEALAKAQELAEET-GATFVHPFDDPDVIA-GQG  158 (404)
T ss_pred             HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCccHHH-HHH
Confidence            9999999999999999999999999999999999999999864  899999999999886 899999999999986 999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |+|+||++|+ +++|+||+|+|+||+++|++.+||+.+|++|||||||+++++|.
T Consensus       159 t~a~EI~~q~-~~~d~vv~~vG~GG~~~Gi~~~~k~~~p~~kiigVe~~~~~~~~  212 (404)
T PRK08198        159 TIGLEILEDL-PDVDTVVVPIGGGGLISGVATAVKALRPEVRVIGVQAEGAPAMP  212 (404)
T ss_pred             HHHHHHHHhC-CCCCEEEEEeCHhHHHHHHHHHHHHhCCCCEEEEEEeCCChHHH
Confidence            9999999999 47999999999999999999999999999999999999998874

>PRK08638 threonine dehydratase; Validated

Probab=100.00  E-value=7.4e-51  Score=350.08  Aligned_cols=206  Identities=26%  Similarity=0.364  Sum_probs=189.9

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      +.+..+++++...+++|||+++++|++..|++||+|+|++|||||||||++.+++..+.+...    ..+|+++|+||||
T Consensus        12 ~~i~~a~~~i~~~i~~TPlv~~~~l~~~~g~~i~~K~E~~nptGS~KdR~a~~~i~~~~~~~~----~~~vv~~SsGN~g   87 (333)
T PRK08638         12 DDIIEAKQRLAGRIRKTPLPRSNYLSERCKGEIFLKLENMQRTGSFKIRGAFNKLSSLTDAEK----RKGVVACSAGNHA   87 (333)
T ss_pred             HHHHHHHHHhhCcCcCCCceechhhHHhhCCeEEEEeccCCccCCcHHHHHHHHHHhccHHhc----CCeEEEeCCcHHH
Confidence            456778999999999999999999998888999999999999999999999999998765332    3459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      .|+|++|+.+|++|+||||++.+..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+++ ||.
T Consensus        88 ~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~a~~~-g~~~~~~~~~~~~~~-g~~  163 (333)
T PRK08638         88 QGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDN--FNDTIAKVEEIVEEE-GRTFIPPYDDPKVIA-GQG  163 (333)
T ss_pred             HHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcC--HHHHHHHHHHHHHhc-CCEEcCcCCCcchhc-ccc
Confidence            9999999999999999999999999999999999999999864  889999999999887 789999999999986 999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      ++++||++|+ +++|+||+|+|+||+++|++.+||+.+|++|||+|||+++++|.
T Consensus       164 t~a~Ei~~q~-~~~d~vv~~vG~Gg~~~Gv~~~lk~~~~~~~vigVep~g~~~~~  217 (333)
T PRK08638        164 TIGLEILEDL-WDVDTVIVPIGGGGLIAGIAVALKSINPTIHIIGVQSENVHGMA  217 (333)
T ss_pred             HHHHHHHhhc-CCCCEEEEEeChhHHHHHHHHHHHHhCCCCEEEEEEECCCchHH
Confidence            9999999999 57999999999999999999999999999999999999987654

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=6.1e-51  Score=338.78  Aligned_cols=219  Identities=61%  Similarity=0.977  Sum_probs=207.4

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      .+...+.+.+.+.+|+|||+++++....+.++||+|+|.+||+||.|||.++.|+.+|+.+|.+.||+.+++++||||+|
T Consensus        37 ~~~~~~~~~~~~liG~TPlv~ln~i~~g~~~~i~~K~E~~~p~~SvKdRia~sMi~~Ae~~G~i~pg~stliEpTSGNtG  116 (362)
T KOG1252|consen   37 AERILILWDVRDLIGNTPLVKLNKIAGGCVARIAAKLEYMNPGGSVKDRIAWSMIEDAEKKGLITPGKSTLIEPTSGNTG  116 (362)
T ss_pred             chhhhhhhhHHHHhCCCceEEeccccCCccceEEEEeeecCCcccHHHHHHHHHHHHHHHcCCccCCceEEEecCCCchH
Confidence            34456777889999999999999998878899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhH---HHHHHHHHHhhCCCeeecCCCCCCccHHH
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDE---EFRIVEELLNKIPTSFNPHQFKNPANPKT  159 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~n~~~~~~  159 (221)
                      .+||++|+..|++|+++||++.+.+|+..|+++|++|+++++...+..   ....+.++..+.|+.+.++||.||.|+.+
T Consensus       117 igLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a~~~~~~e~ai~~a~~l~~~~pna~~l~Qf~np~Np~~  196 (362)
T KOG1252|consen  117 IGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPAAGMKGPESAIGKAEELLNKTPNAYILDQFHNPGNPLA  196 (362)
T ss_pred             HHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChHHccCChHHHHHHHHHHHHhCCChHHHHHhcCCCCccc
Confidence            999999999999999999999999999999999999999998766666   88999999999999999999999999999


Q ss_pred             HHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCCC
Q 043209          160 HYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA  221 (221)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~~  221 (221)
                      ||.++++||++|+.+++|.+|.++|||||++|+.+++|+.+|++||++|||.+|..+.++.+
T Consensus       197 hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~~~kVv~vdp~~S~~~~~~~~  258 (362)
T KOG1252|consen  197 HYETTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNPNIKVVGVDPQESIVLSGGKP  258 (362)
T ss_pred             ccccccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCCCCEEEEeCCCcceeccCCCC
Confidence            99999999999999999999999999999999999999999999999999999999888753

>PRK06382 threonine dehydratase; Provisional

Probab=100.00  E-value=1.9e-50  Score=356.25  Aligned_cols=204  Identities=26%  Similarity=0.348  Sum_probs=190.1

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      ++..++.++...+++|||++++.|++..|++||+|+|++|||||||+|++.+++..+.+.+.    ...||++|+||||+
T Consensus        11 ~i~~a~~~~~~~i~~TPl~~~~~ls~~~g~~v~~K~E~~nptGSfK~Rga~~~i~~~~~~~~----~~gvv~aSsGN~g~   86 (406)
T PRK06382         11 DILYAKSYLEGYLNRTPLIHSTTFGDEYGGDIYFKLENFQKTGSFKSRGAVFKFSKLSEDEL----RNGVITASAGNHAQ   86 (406)
T ss_pred             HHHHHHHHHhCcCCCCCeeEhhhhHHHhCCEEEEEecCCCCCCCCHHHHHHHHHHhcchhcc----CCeEEEECCCHHHH
Confidence            45578889999999999999999998899999999999999999999999999988776553    34499999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      |+|++|+.+|++|+||||+.++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+++ |++|
T Consensus        87 a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~--~~~a~~~a~~la~~~-~~~~v~~~~~~~~i~-g~~t  162 (406)
T PRK06382         87 GVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRD--YDEAHRYADKIAMDE-NRTFIEAFNDRWVIS-GQGT  162 (406)
T ss_pred             HHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCccCChHHHH-HHHH
Confidence            999999999999999999999999999999999999999875  889999999999887 899999999999986 9999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      +++||++|+ +.+|+||+|+|+||+++|++.++|..+|++|||||||+++++|
T Consensus       163 ~~~Ei~eq~-~~~d~vvvpvG~GG~~~Gv~~~~k~~~p~~~vigVe~~~~~~~  214 (406)
T PRK06382        163 IGLEIMEDL-PDLDQIIVPVGGGGLISGIALAAKHINPNVKIIGIESELSDSM  214 (406)
T ss_pred             HHHHHHHhc-CCCCEEEEeeChHHHHHHHHHHHHHhCCCCEEEEEEECCChHH
Confidence            999999999 4799999999999999999999999999999999999999876

>TIGR02991 ectoine_eutB ectoine utilization protein EutB

Probab=100.00  E-value=3.2e-50  Score=344.40  Aligned_cols=206  Identities=22%  Similarity=0.275  Sum_probs=189.8

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      .++..+++++...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++..+.+...    ..+||++|+||||
T Consensus         4 ~~i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g   79 (317)
T TIGR02991         4 QDIERAAARISGRVEETPLVESPSLSELCGVPVHLKLEHRQTTGSFKLRGATNAVLSLSDTQR----AAGVVAASTGNHG   79 (317)
T ss_pred             HHHHHHHHHHhCcCCCCCceechhhHHhhCCeEEEEeccCCCCCCcHHHHHHHHHHhhhHhcc----CCeEEEECCCHHH
Confidence            367788999999999999999999998888999999999999999999999999988764321    3459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      .|+|++|+.+|++|++|||...+..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+++++ ||+
T Consensus        80 ~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~n~~~~~-g~~  155 (317)
T TIGR02991        80 RALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRS--QDDAQEEVERLVADR-GLTMLPPFDHPDIVA-GQG  155 (317)
T ss_pred             HHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEeeCCCCChHHHh-hHH
Confidence            9999999999999999999999999999999999999999975  888889999998886 789999999999986 899


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |+++||++|+ +++|+||+|+|+||+++|++++||+++|++|||+|||++++++.
T Consensus       156 t~a~Ei~~q~-~~~d~vvv~~G~Gg~~~Gi~~~~k~~~p~~~vigvep~~~~~~~  209 (317)
T TIGR02991       156 TLGLEVVEQM-PDLATVLVPLSGGGLASGVAMAVKAARPDTRVIGVSMERGAAMK  209 (317)
T ss_pred             HHHHHHHHhC-CCCCEEEEEcChhHHHHHHHHHHHHhCCCCEEEEEEECCchHHH
Confidence            9999999999 46899999999999999999999999999999999999888774

Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.

>PRK12483 threonine dehydratase; Reviewed

Probab=100.00  E-value=2.4e-50  Score=362.23  Aligned_cols=199  Identities=26%  Similarity=0.344  Sum_probs=185.5

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ++...+.+|||+++++|++.+|++||+|+|++|||||||+|+|++++..+.++..    .+.||++|+||||.++|++|+
T Consensus        30 ~i~~~v~~TPL~~~~~Ls~~~g~~IylK~E~lqptGSfK~RGA~n~i~~l~~~~~----~~GVV~aSaGNha~gvA~aA~  105 (521)
T PRK12483         30 RVYDVARETPLQRAPNLSARLGNQVLLKREDLQPVFSFKIRGAYNKMARLPAEQL----ARGVITASAGNHAQGVALAAA  105 (521)
T ss_pred             HHhhhcCCCCeeEchhhhHhhCCEEEEEEcCCCCCCchHHHHHHHHHHHhHHHHh----cCcEEEECCCHHHHHHHHHHH
Confidence            5678899999999999999999999999999999999999999999988764332    344999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      .+|++|+||||..++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.++. |++|+|.||++
T Consensus       106 ~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~--~d~a~~~A~~la~e~-g~~~v~pfdd~~via-GqgTig~EI~e  181 (521)
T PRK12483        106 RLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGES--FPDALAHALKLAEEE-GLTFVPPFDDPDVIA-GQGTVAMEILR  181 (521)
T ss_pred             HhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCeeeCCCCChHHHH-HHHHHHHHHHH
Confidence            99999999999999999999999999999999864  899999999999987 789999999999996 99999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |++..+|+||+|+|+||+++|++.++|..+|++|||||||+++++|.
T Consensus       182 Q~~~~~D~VvvpvGgGGliaGia~~~K~~~p~vkVIGVep~~a~~~~  228 (521)
T PRK12483        182 QHPGPLDAIFVPVGGGGLIAGIAAYVKYVRPEIKVIGVEPDDSNCLQ  228 (521)
T ss_pred             HhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEEeCCCchhh
Confidence            99656999999999999999999999999999999999999999875

>PRK06110 hypothetical protein; Provisional

Probab=100.00  E-value=3e-50  Score=345.55  Aligned_cols=205  Identities=20%  Similarity=0.219  Sum_probs=188.8

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      ++..+++++...+++|||+++++|++.+|.+||+|+|++||+||||||++.+++..+.+++...   ..|+++|+||||+
T Consensus         7 ~i~~a~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~Rga~~~l~~a~~~~~~~---~~vv~aSsGN~g~   83 (322)
T PRK06110          7 ELEAAAAVVYAAMPPTPQYRWPLLAERLGCEVWVKHENHTPTGAFKVRGGLVYFDRLARRGPRV---RGVISATRGNHGQ   83 (322)
T ss_pred             HHHHHHHHHhCcCcCCCcccchhHHHHhCCeEEEEeccCCCcCCcHHHHHHHHHHHhhhhcCCC---ceEEEECCCHHHH
Confidence            5677889999999999999999999888899999999999999999999999999998876433   3499999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      |+|++|+++|++|+||||.+.+..|++.++.+||+|+.++.  +++++.+.++++++++ +++|++++ |+.+++ ||.|
T Consensus        84 alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~-~~~~~~-G~~t  158 (322)
T PRK06110         84 SVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGE--DFQAAREEAARLAAER-GLHMVPSF-HPDLVR-GVAT  158 (322)
T ss_pred             HHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEcCCC-CChHHh-ccch
Confidence            99999999999999999999999999999999999999975  4889999999998886 78999998 667775 9999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      +++||++|++ ++|+||+|+|+||+++|++.+|++.+|++|||+|||++++++.
T Consensus       159 ~~~Ei~~q~~-~~D~vv~pvG~Gg~~~Gv~~~~k~~~~~~~vi~Vep~~~~~~~  211 (322)
T PRK06110        159 YALELFRAVP-DLDVVYVPIGMGSGICGAIAARDALGLKTRIVGVVSAHAPAYA  211 (322)
T ss_pred             HHHHHHhhCC-CCCEEEEecCHHHHHHHHHHHHHHhCCCCEEEEEeeCCChHHH
Confidence            9999999995 7999999999999999999999999999999999999998764

>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase

Probab=100.00  E-value=2.2e-49  Score=335.98  Aligned_cols=200  Identities=55%  Similarity=0.906  Sum_probs=183.9

Q ss_pred             CCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeE
Q 043209           17 GNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKL   96 (221)
Q Consensus        17 ~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~   96 (221)
                      |+|||+++++|++..|.+||+|+|++|||||||+|++.+++..+.++|...++ .+|+++|+||||+|+|++|+++|++|
T Consensus         1 g~TPl~~~~~l~~~~g~~i~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~~~~~-~~vv~~SsGN~g~alA~~a~~~G~~~   79 (291)
T cd01561           1 GNTPLVRLNRLSPGTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPG-TTIIEPTSGNTGIGLAMVAAAKGYRF   79 (291)
T ss_pred             CCCCEEEccccCCCCCCeEEEEecccCCCCcchHHHHHHHHHHHHHcCCCCCC-CEEEEeCCChHHHHHHHHHHHcCCeE
Confidence            68999999999988889999999999999999999999999999999875555 45999999999999999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHcCCEEEEeCCCC--ChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCC
Q 043209           97 ILVMPAFMSLEKRIILQAYGAQLILTNAEM--GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRG  174 (221)
Q Consensus        97 ~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~  174 (221)
                      +||+|.+.+..+++.++.+||+|+.++.+.  +.+++.+.+++++++.++++|+++|+||.++++|++|+++||.+|++.
T Consensus        80 ~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~g~~~t~~~Ei~~ql~~  159 (291)
T cd01561          80 IIVMPETMSEEKRKLLRALGAEVILTPEAEADGMKGAIAKARELAAETPNAFWLNQFENPANPEAHYETTAPEIWEQLDG  159 (291)
T ss_pred             EEEECCCCCHHHHHHHHHcCCEEEEeCCCCcCCHHHHHHHHHHHHhhCCCcEEecCCCCchHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999998762  237888899998888768999999999999984455999999999976


Q ss_pred             CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          175 QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       175 ~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      .||+||+|+|+||+++|++.+|+..+|++|||+|||++++++.
T Consensus       160 ~~d~vv~~~G~Gg~~~Gi~~~~~~~~~~~~vi~Ve~~~~~~~~  202 (291)
T cd01561         160 KVDAFVAGVGTGGTITGVARYLKEKNPNVRIVGVDPVGSVLFS  202 (291)
T ss_pred             CCCEEEEeCChHHHHHHHHHHHHHhCCCCEEEEEecCCCcccC
Confidence            7999999999999999999999999999999999999998873

CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.

>PLN02356 phosphateglycerate kinase

Probab=100.00  E-value=1.9e-49  Score=347.22  Aligned_cols=209  Identities=39%  Similarity=0.618  Sum_probs=181.5

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      +....+.+.+++|||+++++|+...|++||+|+|++|||||||||++.+++..++++|.+.++.. |+++||||||.|+|
T Consensus        42 ~~~~~~~~~ig~TPLv~~~~l~~~~g~~v~~KlE~~nPtGS~KdR~A~~~i~~a~~~g~~~~~g~-VveaSSGN~g~alA  120 (423)
T PLN02356         42 KPRNGLIDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQLFPGGV-VTEGSAGSTAISLA  120 (423)
T ss_pred             chhhhHHhhcCCCceEECcccccccCCEEEEEeccCCCCCCHHHHHHHHHHHHHHhCCccCCCCE-EEEeCCHHHHHHHH
Confidence            35566888899999999999988888999999999999999999999999999999887767644 88899999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-----CChh-HHH---HHHHHHHhh----------------
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-----MGID-EEF---RIVEELLNK----------------  141 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-----~~~~-~~~---~~a~~~~~~----------------  141 (221)
                      ++|+.+|++|+||||++++..|++.++.+||+|+.+++.     .++. .+.   ..+++++++                
T Consensus       121 ~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~~~~~~~~~~~~~a~~~~~~a~e~a~~~~~~~~~~~~~~~~~~  200 (423)
T PLN02356        121 TVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRPVSITHKDHYVNIARRRALEANELASKRRKGSETDGIHLEKTN  200 (423)
T ss_pred             HHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECCccCCCcchhHHHHHHHHHHHHHHHHHhhhccccccccccccc
Confidence            999999999999999999999999999999999999641     1221 111   234444433                


Q ss_pred             ----------------CCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEE
Q 043209          142 ----------------IPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKV  205 (221)
Q Consensus       142 ----------------~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kv  205 (221)
                                      .++.+|++||+|+.++.+|+..+|+||++|+++++|+||+|+||||+++|++++||+.+|++||
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~q~~n~~n~~ahg~gTg~EI~eQl~g~~D~vVv~vGtGGti~Gva~~lK~~~P~vkV  280 (423)
T PLN02356        201 GCISEEEKENSLFSSSCTGGFFADQFENLANFRAHYEGTGPEIWEQTQGNLDAFVAAAGTGGTLAGVSRFLQEKNPNIKC  280 (423)
T ss_pred             cccccccccccccccCCCCcEecCccCCcchHHHHHhhHHHHHHHhcCCCCCEEEeCCCchHHHHHHHHHHHHhCCCCEE
Confidence                            1477899999999998777777899999999778999999999999999999999999999999


Q ss_pred             EEEeCCCCccC
Q 043209          206 YGVEPAESAIL  216 (221)
Q Consensus       206 igVe~~~s~~~  216 (221)
                      ++|||++|+.+
T Consensus       281 igVep~~s~~~  291 (423)
T PLN02356        281 FLIDPPGSGLF  291 (423)
T ss_pred             EEEecCCCccc
Confidence            99999998644

>PRK07048 serine/threonine dehydratase; Validated

Probab=100.00  E-value=3.6e-50  Score=344.99  Aligned_cols=205  Identities=20%  Similarity=0.248  Sum_probs=189.0

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      .++..+++++...+++|||++++++++..|++||+|+|++|||||||||++.+++.++.+.+.    ..+||++|+||||
T Consensus         9 ~~i~~a~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g   84 (321)
T PRK07048          9 DDVAAAAARLAGVAHRTPVLTSRTADARTGAQVFFKCENFQRMGAFKFRGAYNALSQFSPEQR----RAGVVTFSSGNHA   84 (321)
T ss_pred             HHHHHHHHHhhCCCCCCCCccchhhHHhcCCeEEEEeccCCCCCCeeHHHHHHHHHhhhHhhc----CCcEEEeCCCHHH
Confidence            356778999999999999999999988888999999999999999999999999998875432    3459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|++|||.+.+..|++.++.+||+|+.++..  ++++.+.+++++++. +++|++||+|+.+++ |+.
T Consensus        85 ~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~--~~~~~~~a~~l~~~~-g~~~~~~~~~~~~~~-g~~  160 (321)
T PRK07048         85 QAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRY--TEDREEIGRRLAEER-GLTLIPPYDHPHVIA-GQG  160 (321)
T ss_pred             HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCCcchhh-ccc
Confidence            9999999999999999999999999999999999999999975  778888899998887 799999999999885 999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      |+++||++|++ .||+||+|+|+||+++|++.++|+.+|++|||||||++++++
T Consensus       161 t~~~EI~~q~~-~~D~vv~~vGtGG~~~Gi~~~~k~~~~~~~vigvep~~~~~~  213 (321)
T PRK07048        161 TAAKELFEEVG-PLDALFVCLGGGGLLSGCALAARALSPGCKVYGVEPEAGNDG  213 (321)
T ss_pred             hHHHHHHhhcC-CCCEEEEecChhHHHHHHHHHHHHhCCCCEEEEEeeCCChhH
Confidence            99999999994 799999999999999999999999999999999999998754

>TIGR02079 THD1 threonine dehydratase

Probab=100.00  E-value=8.7e-50  Score=351.96  Aligned_cols=207  Identities=23%  Similarity=0.333  Sum_probs=187.8

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      +|..+.+++...+++|||+++++|++.+|.+||+|+|++|||||||+|++++++..+.+...    .+.||++|+||||.
T Consensus         2 ~i~~a~~~i~~~i~~TPl~~~~~ls~~~g~~iy~K~E~~~ptGSfK~RgA~~~i~~l~~~~~----~~gvv~aSsGN~g~   77 (409)
T TIGR02079         2 DIEAARKRLKEVVPHTPLQLNERLSEKYGANIYLKREDLQPVRSYKIRGAYNFLKQLSDAQL----AKGVVCASAGNHAQ   77 (409)
T ss_pred             hHHHHHHHHhCcCCCCCccccHHHHHHhCCEEEEEecCCCCCCCcHHHHHHHHHHhCCHHhh----CCEEEEECccHHHH
Confidence            46678899999999999999999998889999999999999999999999999987543322    34599999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE---EEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHH
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL---ILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTH  160 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V---~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  160 (221)
                      ++|++|+.+|++|+||||+.++..|++.++.+||+|   +.++.  +++++.+.+++++++. +++|++||+|+.+++ |
T Consensus        78 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~vv~v~~~g~--~~~~a~~~a~~~~~~~-g~~~~~~~~~~~~~~-g  153 (409)
T TIGR02079        78 GFAYACRHLGVHGTVFMPATTPKQKIDRVKIFGGEFIEIILVGD--TFDQCAAAAREHVEDH-GGTFIPPFDDPRIIE-G  153 (409)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCCeeEEEEeCC--CHHHHHHHHHHHHHhc-CCEEeCCCCCHhHhh-h
Confidence            999999999999999999999999999999999974   34443  4899999999999887 789999999999986 8


Q ss_pred             HhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          161 YETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       161 ~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      ++|++.||++|++..||+||+|+|+||+++|++.+||+.+|++|||||||+++++|..
T Consensus       154 ~~ti~~Ei~~q~~~~~D~vv~pvG~GG~~~Gia~~~k~~~p~~~vigVep~~~~~~~~  211 (409)
T TIGR02079       154 QGTVAAEILDQLPEKPDYVVVPVGGGGLISGLTTYLAGTSPKTKIIGVEPEGAPSMKA  211 (409)
T ss_pred             hHHHHHHHHHhcCCCCCEEEEEecHhHHHHHHHHHHHHhCCCCEEEEEEeCCCCcHHH
Confidence            9999999999996569999999999999999999999999999999999999998753

This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been characterized by models TIGR01124 and TIGR01127. Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway.

>PRK07334 threonine dehydratase; Provisional

Probab=100.00  E-value=4.7e-50  Score=353.62  Aligned_cols=207  Identities=25%  Similarity=0.305  Sum_probs=191.3

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      +++..+++++...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.+...    ...||++|+||||
T Consensus         8 ~~i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~KdR~a~~~i~~~~~~~~----~~~vv~aSsGN~g   83 (403)
T PRK07334          8 ADIRAAAARLAGQVLRTPCVHSRTLSQITGAEVWLKFENLQFTASFKERGALNKLLLLTEEER----ARGVIAMSAGNHA   83 (403)
T ss_pred             HHHHHHHHHHhCCCCCCCccchHHHHHhhCCeEEEEeccCCCCCCchHHHHHHHHHhcCHHHh----CCcEEEECCcHHH
Confidence            467789999999999999999999998888999999999999999999999999998754432    3349999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|+||||...+..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+++ ||.
T Consensus        84 ~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~--~~~~~~~a~~l~~~~-~~~~~~~~~~~~~~~-g~~  159 (403)
T PRK07334         84 QGVAYHAQRLGIPATIVMPRFTPTVKVERTRGFGAEVVLHGET--LDEARAHARELAEEE-GLTFVHPYDDPAVIA-GQG  159 (403)
T ss_pred             HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECcC--HHHHHHHHHHHHHhc-CCEecCCCCCHHHHH-hHH
Confidence            9999999999999999999999999999999999999999764  889999999998886 899999999999986 999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      |+++||++|+ +++|+||+|+|+||+++|++.+||+.+|++|||+|||++++++++
T Consensus       160 t~~~Ei~~q~-~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~~vi~ve~~~~~~~~~  214 (403)
T PRK07334        160 TVALEMLEDA-PDLDTLVVPIGGGGLISGMATAAKALKPDIEIIGVQTELYPSMYA  214 (403)
T ss_pred             HHHHHHHhcC-CCCCEEEEecCHHHHHHHHHHHHHHhCCCCEEEEEEECCCchHHH
Confidence            9999999999 579999999999999999999999999999999999999988853

>PRK08639 threonine dehydratase; Validated

Probab=100.00  E-value=8.3e-50  Score=353.48  Aligned_cols=207  Identities=23%  Similarity=0.351  Sum_probs=187.6

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      ++|..+++++.+.+++|||+++++|++..|++||+|+|++|||||||+|+|.+++..+.+...    ..+||++|+||||
T Consensus        10 ~~i~~a~~~i~~~i~~TPl~~~~~ls~~~g~~l~~K~E~~~ptGSfK~RgA~~~i~~l~~~~~----~~~Vv~aSsGN~g   85 (420)
T PRK08639         10 KDIDKAAKRLKDVVPETPLQRNDYLSEKYGANVYLKREDLQPVRSYKLRGAYNAISQLSDEEL----AAGVVCASAGNHA   85 (420)
T ss_pred             HHHHHHHHHHhCcCcCCCccchHHHHHHhCCEEEEEecCCCCCCCcHHHHHHHHHHhCCHHhh----CCEEEEECccHHH
Confidence            356678899999999999999999998889999999999999999999999999988543221    3459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE---EeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHH
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI---LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKT  159 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~---~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~  159 (221)
                      .++|++|+.+|++|+||||+.++..|++.++.+||+|+   .++.  +++++.+.+++++++. |++|++||+|+.++. 
T Consensus        86 ~alA~~a~~~G~~~~IvmP~~~~~~k~~~~r~~GA~vv~v~~~g~--~~~~a~~~a~~~a~~~-g~~~~~~~~~~~~~~-  161 (420)
T PRK08639         86 QGVAYACRHLGIPGVIFMPVTTPQQKIDQVRFFGGEFVEIVLVGD--TFDDSAAAAQEYAEET-GATFIPPFDDPDVIA-  161 (420)
T ss_pred             HHHHHHHHHcCCCEEEEECCCChHHHHHHHHHcCCCeeEEEEeCc--CHHHHHHHHHHHHHhc-CCcccCCCCChhHhc-
Confidence            99999999999999999999999999999999999754   3333  4899999999999886 799999999999986 


Q ss_pred             HHhhHHHHHHHhhCCC--CCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          160 HYETTGPEIWEGTRGQ--VDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       160 g~~t~~~Ei~~q~~~~--~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |+.|+|.||++|++..  ||+||+|+|+||+++|++.++|+.+|++|||||||++|++|.
T Consensus       162 G~~tig~EI~eq~~~~~~~D~vv~~vG~GG~~aGva~~~k~~~p~~~vigVep~~~~~~~  221 (420)
T PRK08639        162 GQGTVAVEILEQLEKEGSPDYVFVPVGGGGLISGVTTYLKERSPKTKIIGVEPAGAASMK  221 (420)
T ss_pred             chhHHHHHHHHhccccCCCCEEEEecChhHHHHHHHHHHHHhCCCCEEEEEEECCCCcHH
Confidence            9999999999999655  999999999999999999999999999999999999999874

>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen

Probab=100.00  E-value=1.5e-49  Score=338.68  Aligned_cols=206  Identities=26%  Similarity=0.338  Sum_probs=192.4

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      ++|..+++.+.+.+++|||+++++|++.+|.+||+|+|++|||||||||.+.+++.++++.+.    ...||++|+||||
T Consensus         2 ~~~~~~~~~i~~~ig~TPl~~~~~l~~~~g~~i~~K~E~~nptgS~Kdr~a~~~l~~~~~~~~----~~~iv~~ssGN~g   77 (304)
T cd01562           2 EDILAAAARIKPVVRRTPLLTSPTLSELLGAEVYLKCENLQKTGSFKIRGAYNKLLSLSEEER----AKGVVAASAGNHA   77 (304)
T ss_pred             hHHHHHHHHHhCcCCCCCcccchhhHHHhCCeEEEEeccCCCcCCcHHHhHHHHHHhcCHhhc----CCcEEEECCCHHH
Confidence            568889999999999999999999998888999999999999999999999999999887762    2349999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|++|+|.+.+..++++++.+||+|+.++.+  ++++.+.+++++++. +++|++|++|+.+++ |+.
T Consensus        78 ~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~a~~la~~~-~~~~~~~~~n~~~~~-g~~  153 (304)
T cd01562          78 QGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED--FDEAEAKARELAEEE-GLTFIHPFDDPDVIA-GQG  153 (304)
T ss_pred             HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcchhc-cHH
Confidence            9999999999999999999999999999999999999999985  889999999999886 799999999999886 899


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      ++++||++|++ .||+||+|+|||||++|++.+||..+|++|||+|||.+++++.
T Consensus       154 ~~~~Ei~~q~~-~~d~vv~~vGtGgt~~Gi~~~lk~~~~~~kvigv~~~~~~~~~  207 (304)
T cd01562         154 TIGLEILEQVP-DLDAVFVPVGGGGLIAGIATAVKALSPNTKVIGVEPEGAPAMA  207 (304)
T ss_pred             HHHHHHHHhcC-CCCEEEEecCHHHHHHHHHHHHHHhCCCCEEEEEEECCCchHH
Confidence            99999999996 4999999999999999999999999999999999999988763

Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.

>PRK06815 hypothetical protein; Provisional

Probab=100.00  E-value=1e-49  Score=341.62  Aligned_cols=208  Identities=21%  Similarity=0.231  Sum_probs=190.5

Q ss_pred             CccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChH
Q 043209            2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNT   81 (221)
Q Consensus         2 ~~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~   81 (221)
                      .+++..+++++.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++..+.+...    ...||++|+|||
T Consensus         4 ~~~i~~a~~~~~~~i~~TPLv~~~~l~~~~g~~i~~K~E~~nptgS~KdR~a~~~~~~l~~~~~----~~~vv~aSsGN~   79 (317)
T PRK06815          4 FDAILEAHQRLRPQVRVTPLEHSPLLSQHTGCEVYLKCEHLQHTGSFKFRGASNKLRLLNEAQR----QQGVITASSGNH   79 (317)
T ss_pred             HHHHHHHHHHhhCCCCCCCccccHhHHHhhCCeEEEEecCCCCCCCcHHHHHHHHHHhcchhhc----CceEEEECCChH
Confidence            3567789999999999999999999998888999999999999999999999999987643321    345999999999


Q ss_pred             HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209           82 GIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHY  161 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  161 (221)
                      |+|+|++|+.+|++|+||||...+..+++.++.+||+|+.++.+  ++++...+++++++. +++|++|++|+.++. ||
T Consensus        80 g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~-g~  155 (317)
T PRK06815         80 GQGVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGD--ALNAELAARRAAEQQ-GKVYISPYNDPQVIA-GQ  155 (317)
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEecCCCChhhhc-ch
Confidence            99999999999999999999999999999999999999999985  788888999998886 789999999999886 99


Q ss_pred             hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      +++++||++|++ .+|+||+|+|+||+++|++.+|++.+|++|||||||++++++.+
T Consensus       156 ~t~a~Ei~~q~~-~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~vigVep~~~~~~~~  211 (317)
T PRK06815        156 GTIGMELVEQQP-DLDAVFVAVGGGGLISGIATYLKTLSPKTEIIGCWPANSPSLYT  211 (317)
T ss_pred             hHHHHHHHHhcC-CCCEEEEECcHHHHHHHHHHHHHHhCCCCEEEEEEeCCCCcHHH
Confidence            999999999995 69999999999999999999999999999999999999988753

>PRK06608 threonine dehydratase; Provisional

Probab=100.00  E-value=2.3e-49  Score=341.45  Aligned_cols=205  Identities=21%  Similarity=0.215  Sum_probs=188.0

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      ++|..+++++...+++|||+++++|++.+|++||+|+|++||+||||||++.+++.++.++|.+.   ++||++|+||||
T Consensus         8 ~~i~~A~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~---~~vv~~SsGN~g   84 (338)
T PRK06608          8 QNIAAAHNRIKQYLHLTPIVHSESLNEMLGHEIFFKVESLQKTGAFKVRGVLNHLLELKEQGKLP---DKIVAYSTGNHG   84 (338)
T ss_pred             HHHHHHHHHHhCcCcCCCccchHhHHHHhCCEEEEEeCCCCCCCCcHHHHHHHHHHHhhhhcCcC---CeEEEECCCHHH
Confidence            45678899999999999999999999989999999999999999999999999999999988532   459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|++|||...+..|++.++.+||+|+.++.   .+++.+.+++ +++ +++||++||+|+.+++ |+.
T Consensus        85 ~alA~~a~~~G~~~~vv~p~~~~~~k~~~l~~~GA~V~~~~~---~~~~~~~a~~-~~~-~~~~~~~~~~~~~~~~-g~~  158 (338)
T PRK06608         85 QAVAYASKLFGIKTRIYLPLNTSKVKQQAALYYGGEVILTNT---RQEAEEKAKE-DEE-QGFYYIHPSDSDSTIA-GAG  158 (338)
T ss_pred             HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECC---HHHHHHHHHH-HHh-CCCEEcCCCCCHHHhc-cHH
Confidence            999999999999999999999999999999999999999964   3567777777 544 4899999999999986 899


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      +++.||++|++.++|+||+|+|+||+++|++.++++.+|++|||||||++++++
T Consensus       159 t~a~Ei~~q~~~~~D~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigVep~~~~~~  212 (338)
T PRK06608        159 TLCYEALQQLGFSPDAIFASCGGGGLISGTYLAKELISPTSLLIGSEPLNANDA  212 (338)
T ss_pred             HHHHHHHHhcCCCcCEEEEeechhHHHHHHHHHHHhcCCCCEEEEEeeCCChHH
Confidence            999999999976899999999999999999999999999999999999999765

>PRK06352 threonine synthase; Validated

Probab=100.00  E-value=2.6e-49  Score=343.01  Aligned_cols=203  Identities=27%  Similarity=0.332  Sum_probs=183.7

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      ...++++..+|+|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|.     .+||++|+||||+|+|
T Consensus        17 ~~~~~~~l~~G~TPL~~~~~l~~~~g~~l~~K~E~~nptGS~KdR~a~~~i~~a~~~g~-----~~vV~aSsGN~G~AlA   91 (351)
T PRK06352         17 DKTPMISLAEGNTPLIPLPNLSKELGVTLYGKYEGLNPTGSFKDRGMVMAVAKAKEEGA-----EAVICASTGNTSAAAA   91 (351)
T ss_pred             CCcCccccCCCCCCeeEcHhhHHHhCCeEEEEecCCCCccChHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHH
Confidence            33445788999999999999998888999999999999999999999999999999883     4699999999999999


Q ss_pred             HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209           87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG  165 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  165 (221)
                      ++|+.+|++|+||||++ .+..|++.++.+||+|+.++.+  ++++.+.+++++++. ++++.+ +.|+++++ ||.|++
T Consensus        92 ~~aa~~G~~~~ivvp~~~~~~~k~~~~~a~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~-~~n~~~~~-G~~t~~  166 (351)
T PRK06352         92 AYATRAGLKAYIVIPEGKVALGKLAQAVMYGADIISIQGN--FDEALKSVRELAETE-AVTLVN-SVNPYRLE-GQKTAA  166 (351)
T ss_pred             HHHHHcCCcEEEEEeCCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-Cccccc-CCCcccee-eHHHHH
Confidence            99999999999999997 5899999999999999999875  889999999998875 666665 56999996 899999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCC-----cEEEEEeCCCCccCCCC
Q 043209          166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPE-----IKVYGVEPAESAILNGG  219 (221)
Q Consensus       166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~-----~kvigVe~~~s~~~~~~  219 (221)
                      +||++|++..||+||+|+|+||+++|++++||+++|+     +|||+|||++++++..|
T Consensus       167 ~EI~~Q~~~~~D~vvv~vG~GG~~~Gi~~~lk~~~~~~~~~~~~vi~Vep~g~~~~~~g  225 (351)
T PRK06352        167 FEICEQLGSAPDVLAIPVGNAGNISAYWKGFKEWNEAKASGLPRMHGFEAEGAAAIVQG  225 (351)
T ss_pred             HHHHHHcCCCCCEEEEECCchHHHHHHHHHHHHHHhcCCCCCCEEEEEeeCCCCHHHhC
Confidence            9999999767999999999999999999999998877     89999999999876544

>TIGR01137 cysta_beta cystathionine beta-synthase

Probab=100.00  E-value=9.2e-49  Score=350.63  Aligned_cols=206  Identities=46%  Similarity=0.796  Sum_probs=186.5

Q ss_pred             hHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF   88 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~   88 (221)
                      ++.+...+++|||+++++|++..|++||+|+|++|||||||+|++.+++.++.++|.+.+|. +|+++|+||||+|+|++
T Consensus         2 ~~~~~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g~-~vv~~ssGN~g~alA~~   80 (454)
T TIGR01137         2 RDNIIDLIGNTPLVRLNKVSKGIKCELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLKPGD-TIIEPTSGNTGIGLALV   80 (454)
T ss_pred             ccchHHhcCCCceEEccccCCCCCceEEEEEhhcCCCcchHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCcHHHHHHHHH
Confidence            45677889999999999999888889999999999999999999999999999999888874 59999999999999999


Q ss_pred             HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209           89 AAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG  165 (221)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  165 (221)
                      |+.+|++|++|+|++++..|++.++.+||+|+.++....++   ...+.+++++++.++.+|++||+|+.++.+||.++|
T Consensus        81 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~t~~  160 (454)
T TIGR01137        81 AAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTAAAFDSPESHIGVAKRLVREIPGAHILDQYNNPSNPLAHYDGTG  160 (454)
T ss_pred             HHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCccCCCchHHHHHHHHHHHHhCCCcEecccCCChhhHHHHHHhhH
Confidence            99999999999999999999999999999999998642233   235677788777556788999999999877999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCcc
Q 043209          166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAI  215 (221)
Q Consensus       166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~  215 (221)
                      +||++|+++.||+||+|+||||+++|++.+|++.+|++|||||||++|+.
T Consensus       161 ~Ei~~q~~~~~d~vv~~vG~Gg~~~G~~~~~~~~~~~~~vi~ve~~~~~~  210 (454)
T TIGR01137       161 PEILEQCEGKLDMFVAGAGTGGTITGIARYLKESNPKCRIVGADPEGSIL  210 (454)
T ss_pred             HHHHHHhCCCCCEEEEecCchHHHHHHHHHHHhhCCCCEEEEEecCCCcc
Confidence            99999997689999999999999999999999999999999999999863

Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.

>PLN02550 threonine dehydratase

Probab=100.00  E-value=3.3e-49  Score=357.17  Aligned_cols=199  Identities=22%  Similarity=0.349  Sum_probs=184.5

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ++.+.+.+|||+++++|++.+|++||+|+|++|||||||+|++.+.+..+.+...    +..||++|+||||+++|++|+
T Consensus       102 ~v~~~i~~TPL~~s~~LS~~~g~~IylK~E~lqptGSFK~RGA~n~I~~L~~e~~----~~GVV~aSaGNhAqgvA~aA~  177 (591)
T PLN02550        102 KVYDVAIESPLQLAKKLSERLGVKVLLKREDLQPVFSFKLRGAYNMMAKLPKEQL----DKGVICSSAGNHAQGVALSAQ  177 (591)
T ss_pred             hhhccccCChhhhhHHhhHhhCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHhcC----CCCEEEECCCHHHHHHHHHHH
Confidence            4558899999999999999999999999999999999999999999998854432    344999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      ++|++|+||||.+++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.++. |++|+|.||++
T Consensus       178 ~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~--~dea~~~A~~la~e~-g~~fi~pfddp~via-GqgTig~EI~e  253 (591)
T PLN02550        178 RLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDS--YDEAQAYAKQRALEE-GRTFIPPFDHPDVIA-GQGTVGMEIVR  253 (591)
T ss_pred             HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEEECCCCChHHHH-HHHHHHHHHHH
Confidence            99999999999999999999999999999999875  899999999999886 789999999999986 99999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |++..+|+||+|+|+||+++|++.++|..+|++|||||||+++++|.
T Consensus       254 Ql~~~~D~VvvpVGgGGLiaGia~~lK~l~p~vkVIGVEp~~a~~~~  300 (591)
T PLN02550        254 QHQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKIIGVEPSDANAMA  300 (591)
T ss_pred             HcCCCCCEEEEEeChhHHHHHHHHHHHHhCCCCEEEEEEECCChHHH
Confidence            99656999999999999999999999999999999999999998874

>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia

Probab=100.00  E-value=2.7e-49  Score=338.56  Aligned_cols=197  Identities=23%  Similarity=0.302  Sum_probs=179.7

Q ss_pred             CCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEE
Q 043209           18 NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLI   97 (221)
Q Consensus        18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~   97 (221)
                      +|||++++++++..|++||+|+|++||+||||||++.+++.+++++|. .++ ++||++|+||||.|+|++|+.+|++|+
T Consensus         1 ~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~-~~~-~~vv~aSsGN~g~alA~~a~~~G~~~~   78 (316)
T cd06448           1 KTPLIESTALSKTAGCNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGL-NEC-VHVVCSSGGNAGLAAAYAARKLGVPCT   78 (316)
T ss_pred             CCCccccchhhHhhCCeEEEEeccCCCcCChHHHHHHHHHHHHHHhhc-ccC-CeEEEeCCcHHHHHHHHHHHHcCCCEE
Confidence            699999999998888999999999999999999999999999999884 223 459999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCC--C
Q 043209           98 LVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRG--Q  175 (221)
Q Consensus        98 ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--~  175 (221)
                      ||+|...+..+++.|+.+||+|+.++.+ .++++.+.+++++++.++++|++|++|+.+++ ||.++++||++|+++  .
T Consensus        79 iv~p~~~~~~k~~~l~~~GA~v~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~n~~~~~-g~~t~~~Ei~~q~~~~~~  156 (316)
T cd06448          79 IVVPESTKPRVVEKLRDEGATVVVHGKV-WWEADNYLREELAENDPGPVYVHPFDDPLIWE-GHSSMVDEIAQQLQSQEK  156 (316)
T ss_pred             EEECCCCCHHHHHHHHHcCCEEEEECCc-hHHHHHHHHHHHHhccCCcEEeCCCCCchhhc-cccHHHHHHHHHccccCC
Confidence            9999999999999999999999999875 26677778888877755799999999999997 889999999999965  5


Q ss_pred             CCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCCC
Q 043209          176 VDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILNG  218 (221)
Q Consensus       176 ~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~~  218 (221)
                      ||+||+|+|+||+++|++.+|++.+ |++|||+|||++|++|.+
T Consensus       157 ~D~vv~~vG~Gg~~~Gv~~~~k~~~~~~~~ii~Vep~g~~~~~~  200 (316)
T cd06448         157 VDAIVCSVGGGGLLNGIVQGLERNGWGDIPVVAVETEGAHSLNA  200 (316)
T ss_pred             CCEEEEEeCchHHHHHHHHHHHhcCCCCCEEEEEeeCCChHHHH
Confidence            9999999999999999999999996 999999999999987753

>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia

Probab=100.00  E-value=4.7e-49  Score=344.58  Aligned_cols=198  Identities=19%  Similarity=0.225  Sum_probs=178.9

Q ss_pred             cCCCceeecccccCCCC--------CeEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC-----------
Q 043209           16 IGNTPMVYLNNIVDGCK--------ARIAAKLEMMEP-CSSVKDRIAFSMIKD-----AEEKGLITPGK-----------   70 (221)
Q Consensus        16 ~~~TPl~~~~~l~~~~g--------~~i~~K~E~~~p-tGs~K~R~a~~~~~~-----a~~~g~~~~g~-----------   70 (221)
                      +++|||+++++|++.+|        .+||+|+|++|| |||||||++.+++..     +++.|.+.|+.           
T Consensus        50 ~~~TPLv~~~~ls~~~g~~~~~~~~~~v~~K~E~~nP~tGSfKdRgA~~~i~~l~~~~a~~~G~l~pg~~~~~~~~~~~~  129 (404)
T cd06447          50 IIESPLLPIPRMKQALEKLYHQPIKGRLLLKADSHLPISGSIKARGGIYEVLKHAEKLALEHGLLTLEDDYSKLASEKFR  129 (404)
T ss_pred             ccCCCceehHHHHHHhccccccCcCceEEEEecCCCCCCCChHHHHHHHHHHHHhHHHHHHhCCCCcccchhhhhhhhhh
Confidence            99999999999887654        799999999999 999999999999864     77888877764           


Q ss_pred             -----eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe
Q 043209           71 -----TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS  145 (221)
Q Consensus        71 -----~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~  145 (221)
                           .+||++|+||||.|+|++|+.+|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+++++++.++.
T Consensus       130 ~~~~~~~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~--~~~a~~~a~~la~~~~~~  207 (404)
T cd06447         130 KLFSQYSIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETD--YSKAVEEGRKQAAADPMC  207 (404)
T ss_pred             hcccCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHHCCCe
Confidence                 3799999999999999999999999999999999999999999999999999864  899999999999887678


Q ss_pred             eecCCCCCCccHHHHHhhHHHHHHHhhCC---C-----CCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCCccC
Q 043209          146 FNPHQFKNPANPKTHYETTGPEIWEGTRG---Q-----VDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESAIL  216 (221)
Q Consensus       146 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~---~-----~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s~~~  216 (221)
                      +|+++++++..+ +||.|+|+||++|+++   +     ||+||+|+|+||+++|++.+||+. +|+++||+|||++++.+
T Consensus       208 ~~v~~~n~~~~i-aG~~T~g~EI~eQl~~~~~~vD~~~Pd~VvvpvG~GGli~GIa~~lK~~~~p~~kVigVeP~~ap~~  286 (404)
T cd06447         208 YFVDDENSRDLF-LGYAVAASRLKAQLAELGIKVDAEHPLFVYLPCGVGGAPGGVAFGLKLIFGDNVHCFFAEPTHSPCM  286 (404)
T ss_pred             EeCCCCCchhHH-hhHHHHHHHHHHHhhhccCccccCCCCEEEEecCccHHHHHHHHHHHHhcCCCCEEEEEccCCChHH
Confidence            899997666655 5999999999999952   3     458999999999999999999997 79999999999999876

D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.

>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form

Probab=100.00  E-value=4.2e-49  Score=354.08  Aligned_cols=200  Identities=27%  Similarity=0.349  Sum_probs=185.5

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ++.+.+.+|||+++++|++.+|++||+|+|++||+||||+|+|.+++..+.+...    ...||++|+||||.++|++|+
T Consensus        10 ~v~~~i~~TPL~~~~~Ls~~~g~~i~lK~E~lqptgSfK~RgA~n~i~~l~~~~~----~~gVV~aSaGNha~~vA~aa~   85 (499)
T TIGR01124        10 RVYEAAQETPLQKAAKLSERLGNRILIKREDLQPVFSFKLRGAYNKMAQLSPEQK----ARGVIAASAGNHAQGVAFSAA   85 (499)
T ss_pred             HhhCccCCCCeeehHHHHHHhCCEEEEEecCCCCCCCCHHHHHHHHHHHhhHHhc----CCEEEEECCCHHHHHHHHHHH
Confidence            6788899999999999999899999999999999999999999999988743322    345999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      ++|++|+||||.+++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.++. |++|+|.||++
T Consensus        86 ~~Gi~~~IvmP~~tp~~Kv~~~r~~GA~Vvl~g~~--~d~a~~~a~~la~~~-g~~~i~p~~~~~~i~-G~gtig~EI~~  161 (499)
T TIGR01124        86 RLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGAN--FDDAKAKAIELSQEK-GLTFIHPFDDPLVIA-GQGTLALEILR  161 (499)
T ss_pred             HcCCCEEEEECCCCCHHHHHHHHhCCCEEEEeCcC--HHHHHHHHHHHHHhc-CCEeeCCCCChHHHH-hhHHHHHHHHH
Confidence            99999999999999999999999999999999864  899999999999987 789999999999986 99999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      |++.++|+||+|+|+||+++|++.++|..+|++|||||||+++++|.+
T Consensus       162 q~~~~~D~vvvpvGgGGliaGia~~lk~~~p~~kVIgVep~~~~~~~~  209 (499)
T TIGR01124       162 QVANPLDAVFVPVGGGGLAAGVAALIKQLMPEIKVIGVEPTDSDCMKQ  209 (499)
T ss_pred             hCCCCCCEEEEccCccHHHHHHHHHHHHhCCCCEEEEEEECCChHHHH
Confidence            996679999999999999999999999999999999999999988754

Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.

>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form

Probab=100.00  E-value=4.3e-49  Score=345.50  Aligned_cols=190  Identities=29%  Similarity=0.409  Sum_probs=179.4

Q ss_pred             CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEE
Q 043209           19 TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLIL   98 (221)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~i   98 (221)
                      |||+++++|++..|++||+|+|++|||||||||++.+++.++.+++.    ..+||++|+||||.++|++|+.+|++|+|
T Consensus         1 TPl~~~~~ls~~~g~~i~~K~E~~~ptgS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~alA~~a~~~G~~~~i   76 (380)
T TIGR01127         1 TPLIYSTTLSDITGSEVYLKLENLQKTGSFKIRGALNKIANLSEDQR----QRGVVAASAGNHAQGVAYAAKKFGIKAVI   76 (380)
T ss_pred             CCceehHHHHHHhCCeEEEEecCCCCCCCcHHHHHHHHHHhcchhcc----CCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence            89999999999899999999999999999999999999999988775    34599999999999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCCCCCE
Q 043209           99 VMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDI  178 (221)
Q Consensus        99 vvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~  178 (221)
                      |||+.++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.++. ||.|++.||++|++ ++|+
T Consensus        77 v~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~-g~~t~~~Ei~~q~~-~~D~  151 (380)
T TIGR01127        77 VMPESAPPSKVKATKSYGAEVILHGDD--YDEAYAFATSLAEEE-GRVFVHPFDDEFVMA-GQGTIGLEIMEDIP-DVDT  151 (380)
T ss_pred             EEcCCCcHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCChhhhh-hhHHHHHHHHHhCC-CCCE
Confidence            999999999999999999999999864  899999999999886 889999999999885 99999999999994 7999


Q ss_pred             EEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          179 FVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       179 vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      ||+|+|+||+++|++.++|+.+|++|||||||++++++.
T Consensus       152 vv~~vG~Gg~~aGi~~~~k~~~p~~kvigVe~~~~~~~~  190 (380)
T TIGR01127       152 VIVPVGGGGLISGVASAAKQINPNVKVIGVEAEGAPSMY  190 (380)
T ss_pred             EEEEeChHHHHHHHHHHHHHhCCCCEEEEEEECCChHHH
Confidence            999999999999999999999999999999999998874

A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.

>PRK08246 threonine dehydratase; Provisional

Probab=100.00  E-value=1.3e-48  Score=333.56  Aligned_cols=201  Identities=26%  Similarity=0.354  Sum_probs=184.1

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      ++|..+++++...+++|||++++.++.. +.+||+|+|++|||||||||++.+++..+.+ +     .+.||++|+||||
T Consensus         8 ~~i~~a~~~i~~~i~~TPl~~~~~l~~~-~~~i~~K~E~~nptGS~K~R~a~~~~~~~~~-~-----~~~vv~aSsGN~g   80 (310)
T PRK08246          8 SDVRAAAQRIAPHIRRTPVLEADGAGFG-PAPVWLKLEHLQHTGSFKARGAFNRLLAAPV-P-----AAGVVAASGGNAG   80 (310)
T ss_pred             HHHHHHHHHHhCcCCCCCeeeccccccC-CCEEEEEECCCCCCCCCHHHHHHHHHHhhcc-c-----CCeEEEeCCCHHH
Confidence            4677889999999999999999998865 7899999999999999999999999988765 2     3459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|+||+|+..+..+++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+++++ ||+
T Consensus        81 ~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-g~~~~~~~~n~~~i~-g~~  156 (310)
T PRK08246         81 LAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAE--YADALEAAQAFAAET-GALLCHAYDQPEVLA-GAG  156 (310)
T ss_pred             HHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEeCCCCCChhhhc-chH
Confidence            9999999999999999999999999999999999999999874  888999999988886 899999999999986 999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      |+++||++|+ +.||+||+|+|+||+++|++.+|+.   .+|||+|||++++++.+
T Consensus       157 t~~~Ei~eq~-~~~D~iv~~vG~GG~~~Gi~~~~~~---~~~vi~ve~~~~~~~~~  208 (310)
T PRK08246        157 TLGLEIEEQA-PGVDTVLVAVGGGGLIAGIAAWFEG---RARVVAVEPEGAPTLHA  208 (310)
T ss_pred             HHHHHHHHhc-CCCCEEEEecCccHHHHHHHHHhcC---CCEEEEEeeCCChHHHH
Confidence            9999999999 5799999999999999999999964   48999999999988753

>PRK06381 threonine synthase; Validated

Probab=100.00  E-value=3e-48  Score=332.87  Aligned_cols=195  Identities=22%  Similarity=0.333  Sum_probs=180.1

Q ss_pred             hcccCCCceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           13 TELIGNTPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        13 ~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      ...+++|||+++++|++.+| .+||+|+|++|||||||||++.+++.+++++|     .++||++|+||||+|+|++|+.
T Consensus        10 ~~~~g~TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g-----~~~lv~aSsGN~g~alA~~aa~   84 (319)
T PRK06381         10 EKPPGGTPLLRARKLEEELGLRKIYLKFEGANPTGTQKDRIAEAHVRRAMRLG-----YSGITVGTCGNYGASIAYFARL   84 (319)
T ss_pred             cccCCCCceeEhHhhHHhcCCceEEEEecCCCCccCcHHHHHHHHHHHHHHcC-----CCEEEEeCCcHHHHHHHHHHHH
Confidence            45699999999999998888 69999999999999999999999999999988     3569999999999999999999


Q ss_pred             cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCC-CC-ccHHHHHhhHHHHHH
Q 043209           92 KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFK-NP-ANPKTHYETTGPEIW  169 (221)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-n~-~~~~~g~~t~~~Ei~  169 (221)
                      +|++|+||||...+..+++.++.+||+|+.++.+  ++++.+.+++++++. ++|++++++ |+ .+++ ||.++++||+
T Consensus        85 ~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~~n~~~~~~-G~~t~a~Ei~  160 (319)
T PRK06381         85 YGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK--YEEAVERSRKFAKEN-GIYDANPGSVNSVVDIE-AYSAIAYEIY  160 (319)
T ss_pred             cCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC--HHHHHHHHHHHHHHc-CcEecCCCCCCcchHhh-hHHHHHHHHH
Confidence            9999999999999999999999999999999975  888999999998875 788988886 76 5676 9999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhc------CCCcEEEEEeCCCCccC
Q 043209          170 EGTRGQVDIFVSGIGTGGTVSGVGNFLKKK------NPEIKVYGVEPAESAIL  216 (221)
Q Consensus       170 ~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~------~~~~kvigVe~~~s~~~  216 (221)
                      +|++..||+||+|+|+||+++|++.+|++.      +|.+|||+|||.+++++
T Consensus       161 ~ql~~~~D~vv~~vGtGgt~~Gl~~~~~~~~~~g~~~~~~~vigVe~~~~~~~  213 (319)
T PRK06381        161 EALGDVPDAVAVPVGNGTTLAGIYHGFRRLYDRGKTSRMPRMIGVSTSGGNQI  213 (319)
T ss_pred             HHhCCCCCEEEEcCCccHHHHHHHHHHHHHHhCCCcCCCCEEEEEeeCCCCHH
Confidence            999767999999999999999999999998      79999999999998665

>PRK09224 threonine dehydratase; Reviewed

Probab=100.00  E-value=1.3e-48  Score=352.12  Aligned_cols=199  Identities=28%  Similarity=0.391  Sum_probs=185.2

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ++.+.+.+|||+++++|++.+|++||+|+|++|||||||+|+|.+++..+.+...    .++||++|+||||.++|++|+
T Consensus        13 ~v~~~~~~TPL~~~~~Ls~~~g~~i~lK~E~lqptgSfK~RgA~n~i~~l~~~~~----~~gvV~aSaGNha~avA~aa~   88 (504)
T PRK09224         13 RVYDVAQETPLEKAPKLSARLGNQVLLKREDLQPVFSFKLRGAYNKMAQLTEEQL----ARGVITASAGNHAQGVALSAA   88 (504)
T ss_pred             HhcCcCCCCCceehhHhHHHhCCEEEEEecCCCCCCCChHHHHHHHHHhhhHHhc----CCEEEEECcCHHHHHHHHHHH
Confidence            6788999999999999999899999999999999999999999999998764322    456999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      .+|++|+||||.+++..|++.++.+||+|+.++.+  |+++.+.+++++++. +++|++||+|+.++. |++|++.||++
T Consensus        89 ~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~--~~~a~~~a~~l~~~~-g~~~v~~f~~~~~i~-G~gTi~~EI~~  164 (504)
T PRK09224         89 RLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDS--FDEAYAHAIELAEEE-GLTFIHPFDDPDVIA-GQGTIAMEILQ  164 (504)
T ss_pred             HcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcHHHH-hHHHHHHHHHH
Confidence            99999999999999999999999999999999864  899999999999886 899999999999996 99999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |++..+|+||+|+||||+++|++.++|..+|++|||||||+++++|.
T Consensus       165 q~~~~~D~vvvpvGgGGliaGia~~lk~~~p~~kVigVe~~~~~~~~  211 (504)
T PRK09224        165 QHPHPLDAVFVPVGGGGLIAGVAAYIKQLRPEIKVIGVEPEDSACLK  211 (504)
T ss_pred             hccCCCCEEEEecChhHHHHHHHHHHHHhCCCCEEEEEEECCChHHH
Confidence            99655999999999999999999999999999999999999998875

>PRK08197 threonine synthase; Validated

Probab=100.00  E-value=2.2e-48  Score=342.16  Aligned_cols=198  Identities=24%  Similarity=0.257  Sum_probs=184.1

Q ss_pred             HhhcccCCCceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      .++..+|+|||+++++|++.+| .+||+|+|++|||||||||++.+++..+.++|     ..+|+++|+||+|.|+|++|
T Consensus        72 ~vslgeG~TPL~~~~~l~~~~G~~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g-----~~~vv~aSsGN~g~alA~~a  146 (394)
T PRK08197         72 IVSLGEGMTPLLPLPRLGKALGIGRLWVKDEGLNPTGSFKARGLAVGVSRAKELG-----VKHLAMPTNGNAGAAWAAYA  146 (394)
T ss_pred             CCccCcCCCCceEhHHHHHHhCCCcEEEEeCCCCCCcCcHHhHHHHHHHHHHHcC-----CCEEEEeCCcHHHHHHHHHH
Confidence            3788999999999999988888 59999999999999999999999999999988     35699999999999999999


Q ss_pred             HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209           90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW  169 (221)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  169 (221)
                      +.+|++|+||+|++++..|+++++.+||+|+.++.+  ++++.+.+++++++. +++++++++||++++ |+.|+++||+
T Consensus       147 a~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~~--~~~~~~~a~~~~~~~-g~~~~~~~~np~~ie-G~~t~a~Ei~  222 (394)
T PRK08197        147 ARAGIRATIFMPADAPEITRLECALAGAELYLVDGL--ISDAGKIVAEAVAEY-GWFDVSTLKEPYRIE-GKKTMGLELA  222 (394)
T ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcccccCCCCccchh-cHHHHHHHHH
Confidence            999999999999999999999999999999999875  888889999988886 799999999999997 8999999999


Q ss_pred             HhhCCC-CCEEEEccCchhHHHHHHHHHHhc-------CCCcEEEEEeCCCCccCC
Q 043209          170 EGTRGQ-VDIFVSGIGTGGTVSGVGNFLKKK-------NPEIKVYGVEPAESAILN  217 (221)
Q Consensus       170 ~q~~~~-~d~vv~p~G~Gg~~~Gi~~~~~~~-------~~~~kvigVe~~~s~~~~  217 (221)
                      +|++++ ||+||+|+|+|++++|++.+|+++       ++.+|||+|||++++++.
T Consensus       223 eQl~~~~pD~vvvpvG~Gg~~~Gi~~~~k~~~~~g~~~~~~p~ii~Vq~~g~~~l~  278 (394)
T PRK08197        223 EQLGWRLPDVILYPTGGGVGLIGIWKAFDELEALGWIGGKRPRLVAVQAEGCAPIV  278 (394)
T ss_pred             HHcCCCCCCEEEEeCCChHHHHHHHHHHHHHHHcCCcCCCCCeEEEEEeCCCCHHH
Confidence            999754 999999999999999999999997       488999999999998764

>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]

Probab=100.00  E-value=1e-48  Score=330.58  Aligned_cols=203  Identities=24%  Similarity=0.277  Sum_probs=190.0

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      -.+..++..+..|||.+.--|++.+|.++|+|+|++||+||||.|++.+++..+-++++    +..|+++|.||||.|+|
T Consensus        55 ~~~~~i~~~~~~TPl~~s~~lS~~~g~~vyLK~E~lQpsgSFK~RGa~~~~~kla~~~~----~~gViasSaGNha~a~A  130 (457)
T KOG1250|consen   55 SAHFKIYPVIVETPLLKSVALSKKAGMPVYLKREDLQPSGSFKIRGAGNALQKLAKQQK----KAGVIASSAGNHAQAAA  130 (457)
T ss_pred             hhhhccccceecccchhhhhhhhhcCCceEEEehhcccccceehhhHHHHHHHHHHhhh----cCceEEecCccHHHHHH
Confidence            34556788899999999988999999999999999999999999999999999877764    45699999999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++|+++|++++||||..++.-+++.++.+||+|++.+.+  ++++..++.++++++ |+.|+++||||+.|+ |++|++.
T Consensus       131 yaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~--~deAk~~a~~lAke~-gl~yI~pfDhP~I~a-GqgTig~  206 (457)
T KOG1250|consen  131 YAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGED--WDEAKAFAKRLAKEN-GLTYIPPFDHPDIWA-GQGTIGL  206 (457)
T ss_pred             HHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEeccc--HHHHHHHHHHHHHhc-CceecCCCCCchhhc-CcchHHH
Confidence            999999999999999999999999999999999999886  999999999999998 999999999999996 9999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      ||.+|++..+++|+||||+||+++||+.|+++..|+++|||||+++|++|.
T Consensus       207 EIl~ql~~~~~AI~vpVGGGGLiaGIat~vk~~~p~vkIIGVEt~~a~~f~  257 (457)
T KOG1250|consen  207 EILEQLKEPDGAIVVPVGGGGLIAGIATGVKRVGPHVKIIGVETEGAHSFN  257 (457)
T ss_pred             HHHHhhcCCCCeEEEecCCchhHHHHHHHHHHhCCCCceEEEeecCcHHHH
Confidence            999999766669999999999999999999999999999999999998763

>PRK08813 threonine dehydratase; Provisional

Probab=100.00  E-value=5.3e-48  Score=332.45  Aligned_cols=194  Identities=25%  Similarity=0.293  Sum_probs=180.0

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      ++..+++++...+.+|||++++.+      +||+|+|++|||||||||++.+++..+.+.+.    .+.||++|+||||.
T Consensus        25 ~i~~A~~~i~~~i~~TPL~~~~~l------~v~lK~E~~nptGSfK~RgA~~~l~~a~~~~~----~~~VV~aSsGN~G~   94 (349)
T PRK08813         25 DVLAAQARLRRYLSPTPLHYAERF------GVWLKLENLQRTGSYKVRGALNALLAGLERGD----ERPVICASAGNHAQ   94 (349)
T ss_pred             HHHHHHHHHhCcCCCCCeEECCCC------cEEEEecCCCCcCCCHHHHHHHHHHHHHHcCC----CCeEEEECCCHHHH
Confidence            566788999999999999998765      49999999999999999999999999999885    33599999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      |+|++|+.+|++|+||||.+++..|++.++.+||+|+.++.+  |+++.+.+++++++. +++|+++|+|+++++ ||+|
T Consensus        95 alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~--~~~a~~~a~~la~~~-g~~~v~~~~np~~i~-G~~T  170 (349)
T PRK08813         95 GVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNS--YDEAYAFARELADQN-GYRFLSAFDDPDVIA-GQGT  170 (349)
T ss_pred             HHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEcCccCChHHHH-HHHH
Confidence            999999999999999999999999999999999999999774  899999999999887 899999999999997 9999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      +|+||++|.   ||+||+|+|+||+++|++.+||+  +.+|||||||++++++
T Consensus       171 ig~EI~e~~---pD~VvvpvGgGGliaGia~~lk~--~~~rVigVqpega~~~  218 (349)
T PRK08813        171 VGIELAAHA---PDVVIVPIGGGGLASGVALALKS--QGVRVVGAQVEGVDSM  218 (349)
T ss_pred             HHHHHHcCC---CCEEEEEeCccHHHHHHHHHHhc--CCCEEEEEEECCCchH
Confidence            999999874   79999999999999999999996  5699999999998775

>PRK02991 D-serine dehydratase; Provisional

Probab=100.00  E-value=7e-48  Score=340.80  Aligned_cols=199  Identities=20%  Similarity=0.220  Sum_probs=179.1

Q ss_pred             cCCCceeecccccCCCC--------CeEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC-----------
Q 043209           16 IGNTPMVYLNNIVDGCK--------ARIAAKLEMMEP-CSSVKDRIAFSMIKD-----AEEKGLITPGK-----------   70 (221)
Q Consensus        16 ~~~TPl~~~~~l~~~~g--------~~i~~K~E~~~p-tGs~K~R~a~~~~~~-----a~~~g~~~~g~-----------   70 (221)
                      +++|||++++.+++.+|        .+||+|+|++|| |||||+|++.+++..     +++.|.+.|+.           
T Consensus        73 ~~~TPL~~~~~l~~~~g~~~~~~~~~~V~lK~E~~np~tGSFK~RGA~~~i~~l~~~~a~~~G~~~~~~~~~~l~~~~~~  152 (441)
T PRK02991         73 IIESPLVAIPAMQKALEKEYGQPISGRLLLKKDSHLPISGSIKARGGIYEVLKHAEKLALEAGLLTLDDDYSKLASPEFR  152 (441)
T ss_pred             ccCCCceehHHHHHHhcccccCCcCceEEEEEcCCCCCcCChHHHHHHHHHHHhhHHHHHHhCCCCcCcchhhhcchhhh
Confidence            89999999998887664        699999999999 999999999999875     45677666553           


Q ss_pred             -----eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe
Q 043209           71 -----TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS  145 (221)
Q Consensus        71 -----~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~  145 (221)
                           .+||++|+||||.|+|++|+.+|++|+||||++++..|++.++.+||+|+.++.+  |+++.+.+++++++.++.
T Consensus       153 ~~~~~~~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~--~~~a~~~A~~la~~~~~~  230 (441)
T PRK02991        153 QFFSQYSIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGD--YGVAVEEGRKAAESDPNC  230 (441)
T ss_pred             hhccCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhcCCe
Confidence                 3699999999999999999999999999999999999999999999999999975  899999999998887678


Q ss_pred             eecCCCCCCccHHHHHhhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCCccC
Q 043209          146 FNPHQFKNPANPKTHYETTGPEIWEGTRG--------QVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESAIL  216 (221)
Q Consensus       146 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s~~~  216 (221)
                      +|+++++++..++ ||+|+++||++|+++        .||+||+|+|+||+++|++.+||+. +|++|||+|||++++++
T Consensus       231 ~~~~~~~~~~~ia-G~~Tig~EI~eQl~~~~~~vD~~~Pd~VvvpvGgGGliaGia~~lk~~~~~~~kVigVEp~ga~~~  309 (441)
T PRK02991        231 YFIDDENSRTLFL-GYAVAGLRLKAQLAEQGIVVDADHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCM  309 (441)
T ss_pred             EeCCCCCchhHHH-hHHHHHHHHHHHhhhccCccccCCCCEEEEEeCccHHHHHHHHHHHHhcCCCCEEEEEecCCChHH
Confidence            9999998887775 999999999999963        2669999999999999999999997 68999999999999876


Q ss_pred             C
Q 043209          217 N  217 (221)
Q Consensus       217 ~  217 (221)
                      .
T Consensus       310 ~  310 (441)
T PRK02991        310 L  310 (441)
T ss_pred             H
Confidence            3

>PRK07409 threonine synthase; Validated

Probab=100.00  E-value=7.7e-48  Score=334.38  Aligned_cols=200  Identities=26%  Similarity=0.324  Sum_probs=181.2

Q ss_pred             HHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           10 NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        10 ~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      ++++..+|+|||++++.|++..|++||+|+|++|||||||||++.+++..++++|.     .+||++|+||||.++|++|
T Consensus        23 ~~~~l~~g~TPl~~~~~l~~~~g~~i~~K~E~~nptGSfKdR~a~~~l~~a~~~g~-----~~iv~aSsGN~g~alA~~a   97 (353)
T PRK07409         23 PVVTLGEGNTPLIPAPNLSELLGVEVYVKYEGLNPTGSFKDRGMTMAVTKAKEEGA-----KAVICASTGNTSASAAAYA   97 (353)
T ss_pred             CcccCCCCCCCEEEchhhHHHhCCeEEEEecCCCCccchHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHHHHH
Confidence            34678999999999999988888899999999999999999999999999998883     4699999999999999999


Q ss_pred             HHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHH
Q 043209           90 AAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEI  168 (221)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  168 (221)
                      +.+|++|+||||+. .+..|++.++.+||+|+.++..  ++++.+.+++++++. +++++++ .|+.+++ ||.|+++||
T Consensus        98 ~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~~-g~~t~~~EI  172 (353)
T PRK07409         98 ARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGN--FDDALEIVRELAEKY-PVTLVNS-VNPYRIE-GQKTAAFEI  172 (353)
T ss_pred             HHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-CceecCC-CCchhhh-hHHHHHHHH
Confidence            99999999999997 6889999999999999999975  889999999998887 5777765 5999986 889999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCCCC
Q 043209          169 WEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILNGG  219 (221)
Q Consensus       169 ~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~~~  219 (221)
                      ++|++..+|+||+|+|+||+++|++.+|++..+      .+|||+|||++++++..|
T Consensus       173 ~~q~~~~~d~iv~~vG~GG~~~Gi~~g~~~~~~~~~~~~~~kvigVep~g~~~~~~g  229 (353)
T PRK07409        173 VDALGDAPDYHCIPVGNAGNITAYWKGYKEYHQDGKSTKLPRMMGFQAAGAAPIVRG  229 (353)
T ss_pred             HHHhCCCCCEEEEeCCChHHHHHHHHHHHHHHHcCCccCCCeEEEEecCCCChHhhC
Confidence            999966799999999999999999999998743      599999999999877654

>PRK07591 threonine synthase; Validated

Probab=100.00  E-value=8.2e-48  Score=340.58  Aligned_cols=199  Identities=21%  Similarity=0.260  Sum_probs=185.0

Q ss_pred             HhhcccCCCceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      .++..+|+|||+++++|++.+| .+||+|+|++|||||||||++.+++..|.+.|.     ..|+++|+||||+|+|++|
T Consensus        82 ~v~l~eG~TPLv~~~~l~~~lG~~~l~~K~E~~nPtGSfKdRga~~~v~~A~~~g~-----~~vv~aSsGN~g~alA~~a  156 (421)
T PRK07591         82 PVDLGPGFTPLVKADRLARELGLKNLYIKDDSVNPTHSFKDRVVSVALTAARELGF-----TTVACASTGNLANSVAAHA  156 (421)
T ss_pred             CCcCCCCCCcceEhHHHHHHhCCCcEEEEeCCCCCccChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHHH
Confidence            3788999999999999998888 599999999999999999999999999999884     4599999999999999999


Q ss_pred             HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209           90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW  169 (221)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  169 (221)
                      +.+|++|+||||.+++..|+.+++.+||+|+.++.+  ++++.+.+++++++.++++|.+++.||+.++ |++|+++||+
T Consensus       157 a~~Gl~~~I~vP~~~~~~k~~~~~~~GA~Vi~v~g~--~d~a~~~a~~~~~~~~~~~~~n~~~~p~~ie-G~~Tia~Ei~  233 (421)
T PRK07591        157 ARAGLDSCVFIPADLEAGKIVGTLVYGPTLVAVDGN--YDDVNRLCSELANEHEGWGFVNINLRPYYAE-GSKTLGYEVA  233 (421)
T ss_pred             HHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCEEEecCCCCccccc-chHHHHHHHH
Confidence            999999999999999999999999999999999985  8899999999988876789999888999987 9999999999


Q ss_pred             HhhCCC-CCEEEEccCchhHHHHHHHHHHhc-------CCCcEEEEEeCCCCccCC
Q 043209          170 EGTRGQ-VDIFVSGIGTGGTVSGVGNFLKKK-------NPEIKVYGVEPAESAILN  217 (221)
Q Consensus       170 ~q~~~~-~d~vv~p~G~Gg~~~Gi~~~~~~~-------~~~~kvigVe~~~s~~~~  217 (221)
                      +|++++ ||+||+|+|+||+++|++.+|+++       .+.+|||+|||++++++.
T Consensus       234 eQl~~~~pD~iv~pvG~Gg~~~Gv~~g~kel~~~g~i~~~~prii~Vq~~g~~~~~  289 (421)
T PRK07591        234 EQLGWRLPDQVVAPLASGSLLTKIDKGFQELIKVGLVEDKPVRVFGAQAEGCSPIA  289 (421)
T ss_pred             HHcCCCCCCEEEEeCCchHHHHHHHHHHHHHHhcCCccCCCceEEEEecCCCCHHH
Confidence            999755 999999999999999999999997       588999999999987765

>PRK06721 threonine synthase; Reviewed

Probab=100.00  E-value=2.4e-47  Score=330.88  Aligned_cols=206  Identities=25%  Similarity=0.343  Sum_probs=182.1

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      ++.....+++..+++|||++++++++..|.+||+|+|++|||||||||++.+++.+++++|     ..+||++|+||||+
T Consensus        14 p~~~~~~~~~l~~G~TPl~~l~~l~~~~g~~i~~K~E~~nptGS~KdR~a~~~i~~a~~~g-----~~~vV~aSsGN~G~   88 (352)
T PRK06721         14 PVNENTPDVSLMEGNTPLIPLLNISKQLGIQLYGKYEGANPTGSFKDRGMVMAVAKAKEEG-----SEAIICASTGNTSA   88 (352)
T ss_pred             CCCCCCCccccCcCCCCeeEchhhHHHhCCeEEEEecCCCCccchHHHHHHHHHHHHHHCC-----CCEEEEECCcHHHH
Confidence            4444556688899999999999998888889999999999999999999999999999988     35699999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           84 GMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      |+|++|+.+|++|++|||+.. +..|++.++.+||+|+.++.+  ++++.+.+++++++. ++++++ +.|+.+++ ||.
T Consensus        89 alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~-~~n~~~~~-G~~  163 (352)
T PRK06721         89 SAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGN--FDDALKAVRNIAAEE-PITLVN-SVNPYRIE-GQK  163 (352)
T ss_pred             HHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhC-Cceecc-CCCchhhh-hhh
Confidence            999999999999999999874 788999999999999999864  888999999998886 566665 56888887 899


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHH----HHHHhcC-CCcEEEEEeCCCCccCCCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG----NFLKKKN-PEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~----~~~~~~~-~~~kvigVe~~~s~~~~~~  219 (221)
                      |+++||++|++..+|+||+|+|+||+++|++    .++|+.+ |++|||+|||++++++..|
T Consensus       164 t~~~Ei~eq~~~~~D~ivv~vG~GG~l~G~~~G~~~~lk~~~~~~~~vigVep~~~~~~~~g  225 (352)
T PRK06721        164 TAAFEICDQLQRAPDVLAIPVGNAGNITAYWKGFCEYEKEKGYKKPRIHGFEAEGAAAIVKG  225 (352)
T ss_pred             hHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEecCCCChHhhC
Confidence            9999999999767999999999999999854    5555554 8999999999999877654

>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase

Probab=100.00  E-value=3.1e-47  Score=335.56  Aligned_cols=199  Identities=20%  Similarity=0.232  Sum_probs=179.3

Q ss_pred             ccCCCceeecccccCCC--------CCeEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC----------
Q 043209           15 LIGNTPMVYLNNIVDGC--------KARIAAKLEMMEP-CSSVKDRIAFSMIKD-----AEEKGLITPGK----------   70 (221)
Q Consensus        15 ~~~~TPl~~~~~l~~~~--------g~~i~~K~E~~~p-tGs~K~R~a~~~~~~-----a~~~g~~~~g~----------   70 (221)
                      ++++|||++++++++.+        +.+||+|+|++|| |||||||++.+++..     +++.|.+.++.          
T Consensus        67 ~~~~TPL~~~~~ls~~~~~~~~~~~~~~v~lKlE~~nP~tGSfKdRGA~~~i~~~~~~~A~~~G~l~~~~~~~~l~e~~~  146 (431)
T TIGR02035        67 GIIESPLVEIFNMQKELEKKYQQEIPGRLLLKMDSHLPISGSIKARGGIYEVLKHAEELALEAGLLKLDDDYSILAEKKF  146 (431)
T ss_pred             CccCCCccchHHHHHHhhhcccCCcCceEEEEecccCCccCCcHHHHHHHHHHHhhHHHHHHcCCCCcCcchhhhcchhh
Confidence            89999999999998744        5799999999999 999999999999864     67888877663          


Q ss_pred             ------eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCC
Q 043209           71 ------TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPT  144 (221)
Q Consensus        71 ------~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~  144 (221)
                            .+||++|+||||.|+|++|+.+|++|+||||++++..|++.++.+||+|+.++.+  |+++.+.+++++++.++
T Consensus       147 ~~~~~~~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~--~~~a~~~A~~la~~~~~  224 (431)
T TIGR02035       147 KDFFSRYSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESD--YGVAVEEGRKNADADPM  224 (431)
T ss_pred             hhcccCceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCC
Confidence                  4799999999999999999999999999999999999999999999999999985  89999999999988766


Q ss_pred             eeecCCCCCCccHHHHHhhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCCcc
Q 043209          145 SFNPHQFKNPANPKTHYETTGPEIWEGTRG--------QVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESAI  215 (221)
Q Consensus       145 ~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s~~  215 (221)
                      .+|+++ .|+.++.+||.|++.||++|+++        .||+|++|+|+||+++|++.+||+. +|++|||+|||+++++
T Consensus       225 ~~~~d~-~n~~n~~aG~~T~g~EI~eQl~~~~~~~d~~~pd~V~vp~G~GGli~Gia~~lK~~~~~~vkvi~VEp~~s~~  303 (431)
T TIGR02035       225 CYFVDD-ENSRNLFLGYAVAASRLKKQFDKKGIVVDKEHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAEPTHSPC  303 (431)
T ss_pred             eEECCC-CCcccHHhhHHHHHHHHHHhhhccccccccCCCCEEEEEeCcCHHHHHHHHHHHHhcCCCCEEEEEeeCCCHH
Confidence            788887 45556667999999999999953        4779999999999999999999997 8999999999999987


Q ss_pred             C
Q 043209          216 L  216 (221)
Q Consensus       216 ~  216 (221)
                      +
T Consensus       304 ~  304 (431)
T TIGR02035       304 M  304 (431)
T ss_pred             H
Confidence            5

This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.

>PRK06450 threonine synthase; Validated

Probab=100.00  E-value=4.1e-47  Score=327.14  Aligned_cols=186  Identities=23%  Similarity=0.269  Sum_probs=168.1

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      .++.++|+|||++.+        +||+|+|++|||||||||++.+++..+.++|.     +.|+++|+||+|.|+|++|+
T Consensus        51 ~vslgeG~TPLv~~~--------~l~~K~E~~nPTGSfKDRga~~~i~~a~~~g~-----~~vv~aSsGN~g~slA~~aa  117 (338)
T PRK06450         51 FISLGEGRTPLIKKG--------NIWFKLDFLNPTGSYKDRGSVTLISYLAEKGI-----KQISEDSSGNAGASIAAYGA  117 (338)
T ss_pred             CCCCCCCCCCceecC--------CEEEEecCCCCcCCCHHHHHHHHHHHHHHcCC-----CEEEEECCcHHHHHHHHHHH
Confidence            478999999999964        69999999999999999999999999999873     46999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      .+|++|+||||++++..|+++++.+||+|+.++.+  ++++.+.    +++. +.+|+++++||++++ |++|+++||++
T Consensus       118 ~~G~~~~i~vP~~~~~~k~~~i~~~GA~vi~v~~~--~~~~~~~----a~~~-g~~~~~~~~np~~ie-G~kTia~EI~e  189 (338)
T PRK06450        118 AAGIEVKIFVPETASGGKLKQIESYGAEVVRVRGS--REDVAKA----AENS-GYYYASHVLQPQFRD-GIRTLAYEIAK  189 (338)
T ss_pred             HcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHH----HHhc-CeEeccCCCCccHHH-HHHHHHHHHHH
Confidence            99999999999999999999999999999999875  6665443    4444 778999999999997 89999999999


Q ss_pred             hhCC-CCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCC
Q 043209          171 GTRG-QVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILN  217 (221)
Q Consensus       171 q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~  217 (221)
                      |+++ .||+||+|+|+||+++|++++|+++.+      .+|||+|||++++++.
T Consensus       190 ql~~~~pD~vvvpvG~Ggll~Gi~~g~~el~~~G~i~~~prii~Vq~~g~~p~~  243 (338)
T PRK06450        190 DLDWKIPNYVFIPVSAGTLLLGVYSGFKHLLDSGVISEMPKIVAVQTEQVSPLC  243 (338)
T ss_pred             HcCCCCCCEEEEECCchHHHHHHHHHHHHHHhcCCccCCCeEEEEeeCCCCHHH
Confidence            9964 599999999999999999999999864      4899999999987764

>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate

Probab=100.00  E-value=2.6e-47  Score=327.71  Aligned_cols=198  Identities=26%  Similarity=0.305  Sum_probs=182.9

Q ss_pred             HHhhcccCCCceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHH
Q 043209           10 NDITELIGNTPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF   88 (221)
Q Consensus        10 ~~~~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~   88 (221)
                      +++...+++|||+++++|++..+ .+||+|+|++|||||||||++.+++.++.++|     .++||++|+||||.|+|++
T Consensus        14 ~~~~l~~g~TPl~~~~~l~~~~g~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g-----~~~vv~~SsGN~g~alA~~   88 (324)
T cd01563          14 DIVSLGEGNTPLVRAPRLGERLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELG-----VKAVACASTGNTSASLAAY   88 (324)
T ss_pred             CcccCCCCCCceeechhhHhhcCCCceEEEecCCCCcccHHHhhHHHHHHHHHHcC-----CCEEEEeCCCHHHHHHHHH
Confidence            45888999999999999988776 79999999999999999999999999999887     3469999999999999999


Q ss_pred             HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHH
Q 043209           89 AAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEI  168 (221)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  168 (221)
                      |+.+|++|++|+|.+.+..+++.++.+||+|+.++.+  ++++.+.+++++++.  ++|++|++|+.+++ ||.+++.||
T Consensus        89 a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~--~~~~~~~a~~~~~~~--~~~~~~~~n~~~~~-g~~t~~~Ei  163 (324)
T cd01563          89 AARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGN--FDDALRLVRELAEEN--WIYLSNSLNPYRLE-GQKTIAFEI  163 (324)
T ss_pred             HHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCc--HHHHHHHHHHHHHhc--CeeccCCCCcceec-chhhhHHHH
Confidence            9999999999999999999999999999999999874  889999999998876  78999999999997 999999999


Q ss_pred             HHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCcEEEEEeCCCCccCC
Q 043209          169 WEGTRG-QVDIFVSGIGTGGTVSGVGNFLKKKN------PEIKVYGVEPAESAILN  217 (221)
Q Consensus       169 ~~q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~~------~~~kvigVe~~~s~~~~  217 (221)
                      ++|+++ .+|+||+|+|+||+++|++.+|+..+      |+++||+|||++++++.
T Consensus       164 ~~q~~~~~~d~vv~~vGtGg~~~G~~~~~k~~~~~g~~~~~~~vigve~~~~~~~~  219 (324)
T cd01563         164 AEQLGWEVPDYVVVPVGNGGNITAIWKGFKELKELGLIDRLPRMVGVQAEGAAPIV  219 (324)
T ss_pred             HHHcCCCCCCEEEEecCCcHHHHHHHHHHHHHHhCCccccCCeEEEEecCCCCHHH
Confidence            999964 69999999999999999999999875      58999999999987663

It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.

>PRK05638 threonine synthase; Validated

Probab=100.00  E-value=5.3e-47  Score=337.67  Aligned_cols=194  Identities=22%  Similarity=0.260  Sum_probs=179.6

Q ss_pred             hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      ++..+++|||++++ +++.+|.+||+|+|++|||||||||++.+++.++++.|     .++|+++|+||+|.|+|++|+.
T Consensus        60 v~l~~G~TPLv~~~-~~~~~g~~l~~K~E~~nPtGSfKdR~a~~~i~~a~~~g-----~~~vv~aSsGN~g~alA~~aa~  133 (442)
T PRK05638         60 ISLGEGGTPLIRAR-ISEKLGENVYIKDETRNPTGSFRDRLATVAVSYGLPYA-----ANGFIVASDGNAAASVAAYSAR  133 (442)
T ss_pred             cccCCCCCcEEccc-chHHhCCeEEEEeCCCCCCCChHHHHHHHHHHHHHHcC-----CCEEEEeCCChHHHHHHHHHHH
Confidence            67899999999984 77678889999999999999999999999999999887     4569999999999999999999


Q ss_pred             cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209           92 KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEG  171 (221)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  171 (221)
                      +|++|+||||.+++..|+++++.+||+|+.++.+  ++++.+.+++++++. ++|++++++||++++ |++|+++||++|
T Consensus       134 ~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~--~~~~~~~a~~~~~~~-~~~~~~~~~np~~~e-G~~t~a~Ei~eq  209 (442)
T PRK05638        134 AGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGES--VDEAIEYAEELARLN-GLYNVTPEYNIIGLE-GQKTIAFELWEE  209 (442)
T ss_pred             cCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCC--HHHHHHHHHHHHHhC-CeEecCCCCChhHhh-hHHHHHHHHHHH
Confidence            9999999999999999999999999999999864  899999999998876 899999999999997 999999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCC
Q 043209          172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILN  217 (221)
Q Consensus       172 ~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~  217 (221)
                      ++  ||+||+|+|+||+++|++.+|+++.+      .+|||+|||++++++.
T Consensus       210 ~~--pD~vv~pvG~Gg~~~Gi~~gfkel~~~g~i~~~prii~Vq~~~~~p~~  259 (442)
T PRK05638        210 IN--PTHVIVPTGSGSYLYSIYKGFKELLEIGVIEEIPKLIAVQTERCNPIA  259 (442)
T ss_pred             HC--cCEEEEeCCchHHHHHHHHHHHHHHhCCcccCCCeEEEEecCCCCHHH
Confidence            94  99999999999999999999999865      3799999999987764

>PRK06260 threonine synthase; Validated

Probab=100.00  E-value=4.7e-47  Score=333.98  Aligned_cols=196  Identities=24%  Similarity=0.268  Sum_probs=181.1

Q ss_pred             HhhcccCCCceeecccccCCCCC-eEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKA-RIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~-~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      .++..+|+|||+++++|++.+|. +||+|+|++|||||||||++.+++.+++++|.     ++||++|+||+|.|+|++|
T Consensus        60 ~v~l~~G~TPLv~~~~l~~~~g~~~l~~K~E~~nPTGSfKdRga~~~v~~a~~~g~-----~~vv~aSsGN~g~alA~~a  134 (397)
T PRK06260         60 IVSLNEGGTPLYRCPNLEKELGVKELYVKHEGANPTGSFKDRGMTVGVTKALELGV-----KTVACASTGNTSASLAAYA  134 (397)
T ss_pred             cccCCCCCCCeEEchhhHHHhCCCcEEEEeCCCCCCcCcHHHHHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHHH
Confidence            57889999999999999888886 99999999999999999999999999999883     4699999999999999999


Q ss_pred             HHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHH
Q 043209           90 AAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEI  168 (221)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  168 (221)
                      +.+|++|+||+|.. .+..|+.+++.+||+|+.++.+  ++++.+.+++++++. ++|+++++ |+++++ ||.|+++||
T Consensus       135 a~~G~~~~i~vP~~~~~~~k~~~~~~~GA~vi~v~~~--~~~~~~~a~~~~~~~-g~y~~~~~-np~~~~-G~~t~a~Ei  209 (397)
T PRK06260        135 ARAGLKCYVLLPAGKVALGKLAQALLHGAKVLEVDGN--FDDALDMVVELAKEG-KIYLLNSI-NPFRLE-GQKTIGFEI  209 (397)
T ss_pred             HHcCCcEEEEEeCCCccHHHHHHHHhcCCEEEEECCc--HHHHHHHHHHHHhhC-CEEeecCC-Cchhhc-chhhHHHHH
Confidence            99999999999997 7899999999999999999875  889999999998886 78888887 899987 899999999


Q ss_pred             HHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCcEEEEEeCCCCccC
Q 043209          169 WEGTRG-QVDIFVSGIGTGGTVSGVGNFLKKKN------PEIKVYGVEPAESAIL  216 (221)
Q Consensus       169 ~~q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~~------~~~kvigVe~~~s~~~  216 (221)
                      ++|+++ .||+||+|+|+||+++|++.+|+++.      +.+|||+|||++++++
T Consensus       210 ~eQl~~~~pd~vvvpvG~Gg~~~Gi~~~~~~l~~~G~i~~~prii~Vq~~g~~~~  264 (397)
T PRK06260        210 ADQLGWEVPDRVVLPVGNAGNISAIWKGFKELVELGIIDKLPKMTGIQAEGAAPI  264 (397)
T ss_pred             HHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHhcCCcCCCCeEEEEecCCCcHH
Confidence            999976 69999999999999999999999876      3479999999999876

>PLN02569 threonine synthase

Probab=100.00  E-value=1.5e-46  Score=335.79  Aligned_cols=201  Identities=15%  Similarity=0.174  Sum_probs=182.0

Q ss_pred             hhcccCCCceeecccccCC-CC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDG-CK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~-~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      ++..+|+|||+++++|++. +| .+||+|+|++|||||||||++.+++..+.+.|........|+++|+||||.|+|++|
T Consensus       127 vsl~eG~TPLv~~~~l~~~~~G~~~l~~K~E~~nPTGSFKDRga~~~vs~a~~~g~~~~~~~~Vv~ASSGN~GaAlAaya  206 (484)
T PLN02569        127 VSLFEGNSNLFWAERLGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMAKPVVGVGCASTGDTSAALSAYC  206 (484)
T ss_pred             eecCCCCCceeEhhhhhHhhcCCccEEEEECCCCCCcCHHHHHHHHHHHHHHHhhhccCCccEEEEeCCcHHHHHHHHHH
Confidence            7889999999999999887 78 489999999999999999999999999988764221124599999999999999999


Q ss_pred             HHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHH
Q 043209           90 AAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEI  168 (221)
Q Consensus        90 ~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  168 (221)
                      +.+|++|+||+|++ .+..|+.+++.+||+|+.++++  |+++++.+++++++. ++|+++++ |+++++ ||+|+++||
T Consensus       207 a~~Gl~~~I~vP~~~~~~~k~~qi~a~GA~Vi~v~g~--~d~a~~~a~e~~~~~-~~~~~n~~-Np~~ie-G~kT~a~EI  281 (484)
T PLN02569        207 AAAGIPSIVFLPADKISIAQLVQPIANGALVLSIDTD--FDGCMRLIREVTAEL-PIYLANSL-NSLRLE-GQKTAAIEI  281 (484)
T ss_pred             HhcCCeEEEEEcCCCCCHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHHc-CCEecCCC-CcchhH-hHHHHHHHH
Confidence            99999999999996 7889999999999999999985  999999999998887 68899987 999997 999999999


Q ss_pred             HHhhCCC-CCEEEEccCchhHHHHHHHHHHhcC------CCcEEEEEeCCCCccCC
Q 043209          169 WEGTRGQ-VDIFVSGIGTGGTVSGVGNFLKKKN------PEIKVYGVEPAESAILN  217 (221)
Q Consensus       169 ~~q~~~~-~d~vv~p~G~Gg~~~Gi~~~~~~~~------~~~kvigVe~~~s~~~~  217 (221)
                      ++|++++ ||+||+|+|+||+++|++++|+++.      +.+|||+|||++++++.
T Consensus       282 ~eQl~~~~pD~VvvPvG~Gg~l~Gi~kgfkel~~~G~i~~~Priv~Vqa~g~~pl~  337 (484)
T PLN02569        282 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCKELGLVDRLPRLVCAQAANANPLY  337 (484)
T ss_pred             HHHcCCCCCCEEEEeCCchHHHHHHHHHHHHHHHcCCCCCCCeEEEEeeCCCcHHH
Confidence            9999765 9999999999999999999999873      56899999999998775

>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions

Probab=100.00  E-value=1.7e-45  Score=304.62  Aligned_cols=187  Identities=41%  Similarity=0.586  Sum_probs=175.7

Q ss_pred             CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEE
Q 043209           19 TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLIL   98 (221)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~i   98 (221)
                      |||++++++++..+.+||+|+|++|||||||||++.+++..++++|.+ ++ ..|+++|+||+|.|+|++|+.+|++|++
T Consensus         1 TPl~~~~~l~~~~~~~l~~K~e~~~ptgS~K~R~a~~~l~~a~~~g~~-~~-~~vv~~ssGN~g~alA~~a~~~g~~~~v   78 (244)
T cd00640           1 TPLVRLKRLSKLGGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKL-PK-GVIIESTGGNTGIALAAAAARLGLKCTI   78 (244)
T ss_pred             CCeeEccccccccCCEEEEEecccCCcCCcHHHHHHHHHHHHHHcCCC-CC-CEEEEeCCcHHHHHHHHHHHHcCCCEEE
Confidence            899999999887778999999999999999999999999999998855 33 4599999999999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCC-CCC
Q 043209           99 VMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRG-QVD  177 (221)
Q Consensus        99 vvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~-~~d  177 (221)
                      |+|...+..+++.++.+|++|+.++.+  ++++.+++++++++.++++|+++++|+.+++ |+.++++||.+|++. .+|
T Consensus        79 ~~p~~~~~~~~~~~~~~Ga~v~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~-g~~~~~~Ei~~q~~~~~~d  155 (244)
T cd00640          79 VMPEGASPEKVAQMRALGAEVVLVPGD--FDDAIALAKELAEEDPGAYYVNQFDNPANIA-GQGTIGLEILEQLGGQKPD  155 (244)
T ss_pred             EECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhCCCCEecCCCCCHHHHH-HHHHHHHHHHHHcCCCCCC
Confidence            999999999999999999999999986  8899999999999856899999999999997 888999999999976 599


Q ss_pred             EEEEccCchhHHHHHHHHHHhcCCCcEEEEEeC
Q 043209          178 IFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEP  210 (221)
Q Consensus       178 ~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~  210 (221)
                      +||+|+|+||+++|++.+|++.+|.+|||+|||
T Consensus       156 ~ivvp~GtGg~~~G~~~~~~~~~~~~~ii~v~~  188 (244)
T cd00640         156 AVVVPVGGGGNIAGIARALKELLPNVKVIGVEP  188 (244)
T ss_pred             EEEEecCccHHHHHHHHHHHHhCCCCEEEEEee
Confidence            999999999999999999999999999999998

This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy

>PRK08329 threonine synthase; Validated

Probab=100.00  E-value=1.1e-45  Score=319.98  Aligned_cols=189  Identities=21%  Similarity=0.235  Sum_probs=173.7

Q ss_pred             hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      ++..+|.|||+++.       .+||+|+|++|||||||||++.+++..+.++|.     ++||++|+||||+|+|++|+.
T Consensus        58 ~sl~eg~Tpl~~~~-------~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~~aa~  125 (347)
T PRK08329         58 PHLTPPITPTVKRS-------IKVYFKLDYLQPTGSFKDRGTYVTVAKLKEEGI-----NEVVIDSSGNAALSLALYSLS  125 (347)
T ss_pred             CcCCCCCCccccCC-------CeEEEEeCCCCCCcCCHHHHHHHHHHHHHHcCC-----CEEEEECCCcHHHHHHHHHHH
Confidence            67889999999873       489999999999999999999999999999884     569999999999999999999


Q ss_pred             cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209           92 KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEG  171 (221)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  171 (221)
                      +|++|+||||.+++..|+.+++.+||+|+.++.+  ++++.+.+++++++. +.+|++++.||.+++ |++|+++||++|
T Consensus       126 ~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~~~np~~~e-G~~t~~~Ei~eq  201 (347)
T PRK08329        126 EGIKVHVFVSYNASKEKISLLSRLGAELHFVEGD--RMEVHEEAVKFSKRN-NIPYVSHWLNPYFLE-GTKTIAYEIYEQ  201 (347)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCeeccCCCCchhhc-cchhHHHHHHHH
Confidence            9999999999999999999999999999999875  677888888888876 778899999999997 899999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcC------CCcEEEEEeCCCCccCC
Q 043209          172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKN------PEIKVYGVEPAESAILN  217 (221)
Q Consensus       172 ~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~------~~~kvigVe~~~s~~~~  217 (221)
                      ++ .||+||+|+|+||+++|++++|+++.      +.+|||+|||++++++.
T Consensus       202 l~-~pD~vvvpvG~Gg~l~Gi~~g~kel~~~g~i~~~p~ii~Vq~~g~~~~~  252 (347)
T PRK08329        202 IG-VPDYAFVPVGSGTLFLGIWKGFKELHEMGEISKMPKLVAVQAEGYESLC  252 (347)
T ss_pred             cC-CCCEEEEeCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCchHH
Confidence            95 79999999999999999999999873      56899999999987764

>PRK08206 diaminopropionate ammonia-lyase; Provisional

Probab=100.00  E-value=1.9e-45  Score=323.27  Aligned_cols=210  Identities=21%  Similarity=0.184  Sum_probs=181.2

Q ss_pred             cccchhHHh--hcccCCCceeecccccCCCC-CeEEEEeCCC-CCCCchhhHHHHHHHHHHHH--cCC-C----------
Q 043209            4 EKCAIANDI--TELIGNTPMVYLNNIVDGCK-ARIAAKLEMM-EPCSSVKDRIAFSMIKDAEE--KGL-I----------   66 (221)
Q Consensus         4 ~~~~~~~~~--~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~-~ptGs~K~R~a~~~~~~a~~--~g~-~----------   66 (221)
                      ++..+..++  ....++|||+++++|++.+| ++||+|+|++ |||||||+|++.+.+..+..  .+. +          
T Consensus        28 ~~~~a~~~~~~~~~~~~TPL~~~~~l~~~~G~~~v~~K~E~~q~ptgSFK~RG~~~~i~~~~~~~~~~~~~~~~~~~l~~  107 (399)
T PRK08206         28 EAKKARAFHQSFPGYAPTPLVALPDLAAELGVGSILVKDESYRFGLNAFKALGGAYAVARLLAEKLGLDISELSFEELTS  107 (399)
T ss_pred             HHHHHHHHHhcCCCCCCCCCcchHHHHHHhCCCcEEEecccCcCCCCChHHhhHHHHHHHHHHHHhCCCcccCCHHHhhh
Confidence            344566777  56899999999999999899 6999999998 59999999999988877653  221 0          


Q ss_pred             ------CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHh
Q 043209           67 ------TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLN  140 (221)
Q Consensus        67 ------~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~  140 (221)
                            .++ .+|+++|+||||+|+|++|+.+|++|+||||.+++..|+..++.+||+|+.++.+  ++++.+.++++++
T Consensus       108 ~~~~~~~~~-~~vv~aSsGN~g~alA~~a~~~G~~~~Ivvp~~~~~~k~~~i~~~GA~Vi~v~~~--~~~~~~~a~~~~~  184 (399)
T PRK08206        108 GEVREKLGD-ITFATATDGNHGRGVAWAAQQLGQKAVIYMPKGSSEERVDAIRALGAECIITDGN--YDDSVRLAAQEAQ  184 (399)
T ss_pred             hHHHHhccC-CEEEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHH
Confidence                  011 2499999999999999999999999999999999999999999999999999974  8899999999988


Q ss_pred             hCCCeeecC-----CCCC-CccHHHHHhhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcC--CCcEEEEEe
Q 043209          141 KIPTSFNPH-----QFKN-PANPKTHYETTGPEIWEGTRG---QVDIFVSGIGTGGTVSGVGNFLKKKN--PEIKVYGVE  209 (221)
Q Consensus       141 ~~~~~~~~~-----~~~n-~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~~--~~~kvigVe  209 (221)
                      +. +++|++     +|+| +.++..||.|+++||++|+++   .||+||+|+|+||+++|++.+|++.+  +.+|||+||
T Consensus       185 ~~-g~~~v~~~~~~~~~~~~~~~~~G~~t~a~EI~eQl~~~~~~pD~vvvpvG~GG~~aGi~~~~k~~~~~~~~kii~Ve  263 (399)
T PRK08206        185 EN-GWVVVQDTAWEGYEEIPTWIMQGYGTMADEAVEQLKEMGVPPTHVFLQAGVGSLAGAVLGYFAEVYGEQRPHFVVVE  263 (399)
T ss_pred             Hc-CCEEecCccccCcccccHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEcCCccHHHHHHHHHHHHHcCCCCCEEEEEC
Confidence            87 788886     6765 555556999999999999965   59999999999999999999999984  579999999


Q ss_pred             CCCCccCC
Q 043209          210 PAESAILN  217 (221)
Q Consensus       210 ~~~s~~~~  217 (221)
                      |+++++|.
T Consensus       264 p~gs~~l~  271 (399)
T PRK08206        264 PDQADCLY  271 (399)
T ss_pred             CCCCchHH
Confidence            99998874

>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]

Probab=100.00  E-value=2e-44  Score=287.91  Aligned_cols=205  Identities=23%  Similarity=0.324  Sum_probs=190.6

Q ss_pred             CccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChH
Q 043209            2 GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNT   81 (221)
Q Consensus         2 ~~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~   81 (221)
                      ++++..+++++.+++..||.+.++.+-+..|..+|+|.|++|-+|+||.|+|.+-+..+.++.+    .+.|++.|||||
T Consensus         9 ~~dv~~A~~rik~~ihkTpVlTS~~ln~~~g~~vfFKcE~fQKtGaFKfRGAlNav~~l~~ek~----~kgvithSSGNH   84 (323)
T KOG1251|consen    9 YEDVRAAHQRIKPFIHKTPVLTSENLNEKVGRHVFFKCENFQKTGAFKFRGALNAVSSLKAEKR----AKGVITHSSGNH   84 (323)
T ss_pred             HHHHHHHHHHHHhhhccCceechhhHHHHhhhheEeehhhhhhccceehhhhHHHHHHhhHhhh----cCceEeecCCcH
Confidence            3567789999999999999999999988899999999999999999999999999998874433    456999999999


Q ss_pred             HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209           82 GIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHY  161 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  161 (221)
                      +.|+|++|+..|++++||||.+++..|+..++.||++|+++++.  .+++...++++.++. +.+.++||++|..+. |+
T Consensus        85 aqAlalaAk~~giPa~IVvP~~AP~~Kv~a~~~Yga~ii~~e~~--~~sRE~va~~ltee~-g~~~i~Py~~p~vIa-Gq  160 (323)
T KOG1251|consen   85 AQALALAAKILGIPATIVVPKDAPICKVAATRGYGANIIFCEPT--VESRESVAKDLTEET-GYYLIHPYNHPSVIA-GQ  160 (323)
T ss_pred             HHHHHHHHHhcCCCeEEEecCCChHHHHHHHHhcCceEEEecCc--cchHHHHHHHHHHhc-CcEEeCCCCCcceee-cc
Confidence            99999999999999999999999999999999999999999986  578999999999998 889999999999984 99


Q ss_pred             hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCcc
Q 043209          162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAI  215 (221)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~  215 (221)
                      +|++.|+++|. +.+|++|+|+|+||+++|++.+.+...|+++|++|||++++.
T Consensus       161 gTiA~ElleqV-g~iDalfvpvgGGGllSgvAlaa~~l~P~i~vy~veP~~a~d  213 (323)
T KOG1251|consen  161 GTIALELLEQV-GEIDALFVPVGGGGLLSGVALAAKSLKPSIEVYAVEPEAADD  213 (323)
T ss_pred             chHHHHHHHhh-CccceEEEeecCcchhhHHHHHHhccCCCcEEEEecCcccch
Confidence            99999999999 589999999999999999999999999999999999988753

>TIGR00260 thrC threonine synthase

Probab=100.00  E-value=5.1e-44  Score=307.80  Aligned_cols=203  Identities=21%  Similarity=0.238  Sum_probs=177.5

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCC-eEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKA-RIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~-~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      ++.+.-+.+...+++|||++++++++.+|. +||+|+|++|||||||||++.+++.++.++|     ..+||++|+||||
T Consensus         9 p~~~~~~~~~l~~g~TPl~~~~~l~~~~g~~~i~~K~E~~nptGSfKdR~a~~~l~~a~~~g-----~~~vv~aSsGN~g   83 (328)
T TIGR00260         9 PVTPEKDLVDLGEGVTPLFRSPALVANVGIKNLYVLELFHNPTLSFKDRGMAVALTKALELG-----NDTVLCASTGNTG   83 (328)
T ss_pred             CCCChhhhhhhccCCccCccchHHHHhcCCccEEehhhccCCchhhHhhhHHHHHHHHHHcC-----CCEEEEeCCcHHH
Confidence            333334457788899999999999888886 9999999999999999999999999999887     3469999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCC--CccHHH
Q 043209           83 IGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKN--PANPKT  159 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n--~~~~~~  159 (221)
                      .|+|++|+.+|++|+||+|+. .+..|++.++.+||+|+.++.+  ++++.+.+++++++. +.+++++ .|  +.+++ 
T Consensus        84 ~a~A~~a~~~g~~~~v~~p~~~~s~~k~~~~~~~GA~Vi~~~~~--~~~~~~~~~~~~~~~-~~~~~~~-~n~~~~~~~-  158 (328)
T TIGR00260        84 AAAAAYAGKAGVKVVILYPAGKISLGKLAQALGYNAEVVAIDGN--FDDAQRLVKQLFGDK-EALGLNS-VNSIPYRLE-  158 (328)
T ss_pred             HHHHHHhccCCCcEEEEECCCCCCHHHHHHHHhcCcEEEEecCC--HHHHHHHHHHHHhhc-Ceeeccc-CCCCCeEee-
Confidence            999999999999999999998 8999999999999999999874  889999999998876 4555554 45  88886 


Q ss_pred             HHhhHHHHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhcCC-----CcEEEEEeCCCCccC
Q 043209          160 HYETTGPEIWEGTRG-QVDIFVSGIGTGGTVSGVGNFLKKKNP-----EIKVYGVEPAESAIL  216 (221)
Q Consensus       160 g~~t~~~Ei~~q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~~~-----~~kvigVe~~~s~~~  216 (221)
                      ||.|+++||++|+++ .+|+||+|+|+||+++|++.+|++...     .+++++|||++++++
T Consensus       159 g~~t~~~Ei~~q~~~~~~d~iv~~vG~GG~~~G~~~~~~~~~~~g~~~~p~v~~Ve~~~~~~~  221 (328)
T TIGR00260       159 GQKTYAFEAVEQLGWEAPDKVVVPVPNSGNFGAILKGFKEKKEGGLDSLPVKRGIQAEGAADI  221 (328)
T ss_pred             eehhHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHHHhcCCccCCceeEEEcCCCChH
Confidence            889999999999974 799999999999999999999998510     239999999999655

Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.

>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family

Probab=100.00  E-value=3.1e-43  Score=306.67  Aligned_cols=206  Identities=20%  Similarity=0.201  Sum_probs=176.0

Q ss_pred             chhHHhhcccCCCceeecccccCCCC-CeEEEEeCCCCC-CCchhhHHHHHHHHHHHHc----------------CCCCC
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCK-ARIAAKLEMMEP-CSSVKDRIAFSMIKDAEEK----------------GLITP   68 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~p-tGs~K~R~a~~~~~~a~~~----------------g~~~~   68 (221)
                      ..+.++. ...+|||++++.|++.+| .+||+|+|++|+ +||||+|++.+.+..+.++                +.+.+
T Consensus        12 ~~~~~~~-~~~~TPL~~~~~l~~~~g~~~v~~K~E~~~~~tgSFK~RG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (376)
T TIGR01747        12 AFHKKIP-GYRPTPLCALDHLANLLGLKKILVKDESKRFGLNAFKMLGGSYAIAQYLAEKLHLDIETLSFEHLKNDAIGE   90 (376)
T ss_pred             HHHHhCC-CCCCCCCcchHHHHHHhCCCcEEEeeCCCCCCCCChHHHHHHHHHHHHHHHHhCCCcccCCHHHHhhhHHHh
Confidence            3455554 448999999999999999 599999999985 8999999999999887542                11111


Q ss_pred             --CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCee
Q 043209           69 --GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSF  146 (221)
Q Consensus        69 --g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~  146 (221)
                        +..+||++|+||||+|+|++|+.+|++|+||||++++..|+..++.+||+|+.++.+  ++++.+.+++++++. +++
T Consensus        91 ~~~~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~--~~~a~~~a~~~~~~~-g~~  167 (376)
T TIGR01747        91 KMGQATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMN--YDDTVRLAMQMAQQH-GWV  167 (376)
T ss_pred             hcCCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHHhc-CcE
Confidence              235699999999999999999999999999999999999999999999999999875  889999999998886 688


Q ss_pred             ecC-----CCCC--CccHHHHHhhHHHHHHHhhCC----CCCEEEEccCchhHHHHHHHHHHhcCC--CcEEEEEeCCCC
Q 043209          147 NPH-----QFKN--PANPKTHYETTGPEIWEGTRG----QVDIFVSGIGTGGTVSGVGNFLKKKNP--EIKVYGVEPAES  213 (221)
Q Consensus       147 ~~~-----~~~n--~~~~~~g~~t~~~Ei~~q~~~----~~d~vv~p~G~Gg~~~Gi~~~~~~~~~--~~kvigVe~~~s  213 (221)
                      +++     +|+|  ++.+ .||.|++.||++|++.    .||+||+|+|+||+++|++.++++..+  .++||+|||+++
T Consensus       168 ~~~~~~~~~~~~~~~~ii-~G~~Tia~Ei~eQl~~~~~~~pD~vvvpvG~GGl~~Gi~~~~~~~~~~~~p~vi~Vep~ga  246 (376)
T TIGR01747       168 VVQDTAWEGYEKIPTWIM-QGYATLADEAVEQLREMGSVTPTHVLLQAGVGSMAGGVLGYFVDVYSENNPHSIVVEPDKA  246 (376)
T ss_pred             EeccccccccccCCchHH-HHHHHHHHHHHHHhhccCCCCCCEEEECCchhHHHHHHHHHHHHhcCCCCCEEEEEeeCCC
Confidence            876     4655  5555 4999999999999962    699999999999999999999987653  379999999999


Q ss_pred             ccCC
Q 043209          214 AILN  217 (221)
Q Consensus       214 ~~~~  217 (221)
                      +++.
T Consensus       247 ~~~~  250 (376)
T TIGR01747       247 DCLY  250 (376)
T ss_pred             CHHH
Confidence            9885

This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).

>KOG1481 consensus Cysteine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.2e-43  Score=286.68  Aligned_cols=206  Identities=39%  Similarity=0.633  Sum_probs=184.6

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +...+...+|+|||++++.|++..||+|+.|.|.+||.||.|||.|+++++.|++.|++.+|. .|++.|+||+|.++|.
T Consensus        39 ~~~Gv~~~IGnTpliri~sLs~aTGcnIlaK~Ef~NPggS~KDRvAl~iir~Aee~GkL~~gg-~v~EGtaGsTgIslA~  117 (391)
T KOG1481|consen   39 IVSGVEGAIGNTPLIRINSLSNATGCNILAKAEFLNPGGSVKDRVALYIIRTAEEKGKLVRGG-TVVEGTAGSTGISLAH  117 (391)
T ss_pred             ccchhHHhhCCCceEEeeccccccccchhhhhhccCCCCChhhhhHHHHHHHHHHcCCcccCc-eEEecCCCccchhHHH
Confidence            444678899999999999999999999999999999999999999999999999999999995 4999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC--ChhHHHHHHHHHHhhCC------CeeecCCCCCCccHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM--GIDEEFRIVEELLNKIP------TSFNPHQFKNPANPKT  159 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~--~~~~~~~~a~~~~~~~~------~~~~~~~~~n~~~~~~  159 (221)
                      .|+.+|++|+|+||++.+.+|.+.++.+||+|..|++..  +.+.-.+.|++.+.+.+      ..+|.+||+|++||.+
T Consensus       118 v~~a~Gyk~~I~mPddqs~eK~~ile~LGA~V~rV~pa~i~dp~~yvn~Arr~an~~~~~~ngi~g~fAdQFeN~AN~~a  197 (391)
T KOG1481|consen  118 VARALGYKCHIYMPDDQSQEKSDILEFLGAEVHRVPPAPIVDPNHYVNQARRAANETPNASNGIRGWFADQFENVANWLA  197 (391)
T ss_pred             hhhhcCcceEEECCChHHHHHHHHHHHhcceeeecCCcCccChhHHHHHHHHHhhhcccccCCcccchhhhhcCHHHHHH
Confidence            999999999999999999999999999999999987642  22233444555444432      2367899999999999


Q ss_pred             HHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCC-cEEEEEeCCCCc
Q 043209          160 HYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPE-IKVYGVEPAESA  214 (221)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~-~kvigVe~~~s~  214 (221)
                      ||.++|+||+.|.++++|++++.+|||||++|+++++|+..+. ++++.++|.||.
T Consensus       198 HyetTGPEIw~QtkGniDaFia~~GTGGTiaGVskyLkek~~~~v~~~laDPpGSG  253 (391)
T KOG1481|consen  198 HYETTGPEIWHQTKGNIDAFIAGTGTGGTIAGVSKYLKEKSDGRVAVFLADPPGSG  253 (391)
T ss_pred             HhcCcCcHHHHhhcCCcceEEeccCCCcchHHHHHHHhhcCCCceEEEEeCCCCCc
Confidence            9999999999999999999999999999999999999998876 999999999984

>PRK13028 tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=2.6e-42  Score=301.95  Aligned_cols=204  Identities=21%  Similarity=0.230  Sum_probs=168.5

Q ss_pred             hhcccC-CCceeecccccCCC-CCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           12 ITELIG-NTPMVYLNNIVDGC-KARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        12 ~~~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      ..++.+ +|||+++++|++.+ +++||+|+|++|||||||+|.+...+..+++.|+    ...|+++|+||||+|+|++|
T Consensus        55 ~~~~~g~pTPL~~~~~Ls~~~Gg~~IylK~EdlnptGS~K~r~al~~~l~A~~~G~----~~vI~etgsGnhG~A~A~aa  130 (402)
T PRK13028         55 LKHYVGRPTPLYHAKRLSEELGGAQIYLKREDLNHTGAHKINNCLGQALLAKRMGK----KRLIAETGAGQHGVATATAA  130 (402)
T ss_pred             HHHhCCCCCCeeehHHhHhhcCCCeEEEEECCCCCCcchHHHHHHHHHHHHHHcCC----CeEEEecCcHHHHHHHHHHH
Confidence            345565 79999999999988 5899999999999999999999999999999884    44566789999999999999


Q ss_pred             HHcCCeEEEEecCCCCH---HHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeeecC-CC----CCCccHHH
Q 043209           90 AAKGYKLILVMPAFMSL---EKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFNPH-QF----KNPANPKT  159 (221)
Q Consensus        90 ~~~g~~~~ivvp~~~~~---~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~~-~~----~n~~~~~~  159 (221)
                      +.+|++|+||||+....   .++..|+.+||+|+.|+. ..+++++.+.+.+ +.++.++.+|+. +.    ..|.++..
T Consensus       131 a~~Gl~~~I~m~~~d~~~q~~nv~~mr~~GAeVi~v~~g~~~~~~a~~~a~~~~~~~~~~~~y~~~s~~gp~p~p~~v~~  210 (402)
T PRK13028        131 ALFGLECEIYMGEVDIERQHPNVFRMKLLGAEVVPVTRGGRTLKEAVDSAFEDYLKDPDNTHYAIGSVVGPHPFPMMVRD  210 (402)
T ss_pred             HHcCCCEEEEECCCcchhhHHHHHHHHHcCCEEEEEcCCCCCHHHHHHHHHHHHHHhcCCcEEEecCcCCCCCcHHHHHH
Confidence            99999999999985333   567899999999999985 3358888888744 555534566653 22    12345556


Q ss_pred             HHhhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC--------CccCCCCC
Q 043209          160 HYETTGPEIWEGTR----GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE--------SAILNGGK  220 (221)
Q Consensus       160 g~~t~~~Ei~~q~~----~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~--------s~~~~~~~  220 (221)
                      |+++++.||.+|+.    ..||+||+|+|+||+++|++.+|++ .|++|||||||.+        ++++..|.
T Consensus       211 ~q~tig~Ei~~Q~~~~~g~~pD~vV~~VGgGg~~~Gi~~~f~~-~~~v~iigVE~~G~~~~~~~~aa~l~~g~  282 (402)
T PRK13028        211 FQSVIGEEAREQFLEMTGRLPDAVVACVGGGSNAIGLFSAFLD-DESVRLVGVEPAGRGLDLGEHAATLTLGK  282 (402)
T ss_pred             HhHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHHHh-CCCceEEEEecCCCCcccccccccccCCC
Confidence            99999999999973    3699999999999999999999986 5899999999999        77776653

>TIGR01415 trpB_rel pyridoxal-phosphate dependent TrpB-like enzyme

Probab=100.00  E-value=4.8e-42  Score=302.39  Aligned_cols=201  Identities=20%  Similarity=0.250  Sum_probs=165.9

Q ss_pred             HhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCChHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLI-ECTSGNTGIGMAC   87 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv-~assGN~~~alA~   87 (221)
                      .+.....+|||+++++|++.+|  ++||+|+|++|||||||+|++..++.++.++|.    .. ++ ++|+||||.|+|+
T Consensus        61 ~~~l~g~pTPL~r~~~L~~~lg~~~~Iy~K~E~~nPtGS~K~R~A~~~~~~a~~~G~----~~-~vtetssGN~G~alA~  135 (419)
T TIGR01415        61 RYAQIGRPTPLIRAKGLEELLGTPARIYYKYESVSPTGSHKINTAIAQAYYAKIEGA----KR-LVTETGAGQWGSALSL  135 (419)
T ss_pred             HHHhcCCCCCeEEccchhhhhCCCceEEEEECCCCCCCCcHHHHHHHHHHHHHHcCC----Ce-EEEecCchHHHHHHHH
Confidence            3333436899999999998877  689999999999999999999999999999985    34 55 4688999999999


Q ss_pred             HHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCCCCChhH------------------HHHHHHHHHhhCC-Ce
Q 043209           88 FAAAKGYKLILVMPAFM---SLEKRIILQAYGAQLILTNAEMGIDE------------------EFRIVEELLNKIP-TS  145 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~---~~~~~~~l~~~Ga~V~~v~~~~~~~~------------------~~~~a~~~~~~~~-~~  145 (221)
                      +|+.+|++|+||||+..   +..++..|+.+||+|+.++.+  +++                  ++..+.+.+++.+ ..
T Consensus       136 aaa~~Gl~~~V~mp~~s~~~k~~k~~~m~~~GA~Vi~~~~~--~~~~~r~~~~~~p~~~gsl~~ai~~a~e~a~~~~~~~  213 (419)
T TIGR01415       136 AGALFGLECKVFMVRVSFNQKPYRKYLMELYGAEVIPSPSE--FTEFGREVLKEDPDHPGSLGIAISEAIEYALSDEDTK  213 (419)
T ss_pred             HHHHcCCcEEEEEeCCCcccCHHHHHHHHHcCCEEEEECCc--hhhHHHHhhhcccccccchHHHHHHHHHHHHhCCCCE
Confidence            99999999999999853   567889999999999999875  332                  2456666665543 45


Q ss_pred             eecCCCCCCccHHHHHhhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhc----CCCcEEEEEeCCCCccCCC
Q 043209          146 FNPHQFKNPANPKTHYETTGPEIWEGTRG---QVDIFVSGIGTGGTVSGVGNFLKKK----NPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       146 ~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~----~~~~kvigVe~~~s~~~~~  218 (221)
                      |+++++.|+  ...|+.++|.||++|++.   .||+||+|+|+||+++|++.+|.+.    .+++|||+|||++|++++.
T Consensus       214 y~~~~~~n~--~~~h~~~ig~Ei~~Ql~~~g~~pD~vv~~vG~Gg~~~Gi~~~f~~~~l~g~~~~rviaVep~~~~~l~~  291 (419)
T TIGR01415       214 YSLGSVLNH--VLLHQTVIGLEAKKQMEEAGEDPDVIIGCVGGGSNFAGLAFPFVADKLSGKIDRRFIAAEPKACPTLTR  291 (419)
T ss_pred             EEeCCCCcH--HHHHHHHHHHHHHHHHHhcCCCCCEEEEEeCchHHHHHHHHHHHHHHhcCCCCCEEEEEeeCCChhhhc
Confidence            666676663  345999999999999964   4999999999999999999988432    2689999999999999987


Q ss_pred             CC
Q 043209          219 GK  220 (221)
Q Consensus       219 ~~  220 (221)
                      |.
T Consensus       292 g~  293 (419)
T TIGR01415       292 GE  293 (419)
T ss_pred             Cc
Confidence            63

This model represents a family of pyridoxal-phosphate dependent enzyme (pfam00291) closely related to the beta subunit of tryptophan synthase (TIGR00263). However, the only case in which a member of this family replaces a member of TIGR00263 is in Sulfolobus species which contain two sequences which hit this model, one of which is proximal to the alpha subunit. In every other case so far, either the species appears not to make tryptophan (there is no trp synthase alpha subunit), or a trp synthase beta subunit matching TIGR00263 is also found.

>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase

Probab=100.00  E-value=1.6e-42  Score=304.10  Aligned_cols=201  Identities=20%  Similarity=0.166  Sum_probs=171.0

Q ss_pred             cccCCCceeecccccCCCC-CeEEEEeCCCC-CCCchhhHHHHHHHHHHHH--cCCC--------------C--CCCeEE
Q 043209           14 ELIGNTPMVYLNNIVDGCK-ARIAAKLEMME-PCSSVKDRIAFSMIKDAEE--KGLI--------------T--PGKTVL   73 (221)
Q Consensus        14 ~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~-ptGs~K~R~a~~~~~~a~~--~g~~--------------~--~g~~~v   73 (221)
                      ..+.+|||++++.|++.+| .+||+|+|++| ||||||+|++.+.+..+.+  .|..              .  ....+|
T Consensus        37 ~~~~~TPL~~~~~L~~~~g~~~v~lK~E~~q~~tGSFK~RGa~~~v~~l~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~v  116 (396)
T TIGR03528        37 PGYQPTPLAELDNLAKHLGVGSILVKDESYRFGLNAFKVLGGSYAIGKYLAEKLGKDISELSFEKLKSNEIREKLGDITF  116 (396)
T ss_pred             CCCcCCCCcchHHHHHHhCCCcEEEeeCCCCCCcCChHHHHHHHHHHHHHHHHhCCCcccccHHHhhhHHHHhhccCcEE
Confidence            4568899999999999899 69999999998 4999999999999987533  2210              0  002269


Q ss_pred             EeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecC----
Q 043209           74 IECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPH----  149 (221)
Q Consensus        74 v~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~----  149 (221)
                      |++|+||||+|+|++|+.+|++|+||||.+++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++    
T Consensus       117 v~aSsGN~g~alA~~aa~~Gi~~~IvvP~~~~~~K~~~ir~~GAeVi~~~~~--~~~a~~~a~~~a~~~-g~~~v~~~~~  193 (396)
T TIGR03528       117 VTATDGNHGRGVAWAANQLGQKSVVYMPKGSAQIRLENIRAEGAECTITDLN--YDDAVRLAWKMAQEN-GWVMVQDTAW  193 (396)
T ss_pred             EEECccHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEeeccccc
Confidence            9999999999999999999999999999999999999999999999999874  889999999998886 788885    


Q ss_pred             -CCCC--CccHHHHHhhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhc-CCC-cEEEEEeCCCCccCCC
Q 043209          150 -QFKN--PANPKTHYETTGPEIWEGTR----GQVDIFVSGIGTGGTVSGVGNFLKKK-NPE-IKVYGVEPAESAILNG  218 (221)
Q Consensus       150 -~~~n--~~~~~~g~~t~~~Ei~~q~~----~~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~-~kvigVe~~~s~~~~~  218 (221)
                       +|+|  +..+ .||.|+++||++|++    +.||+||+|+|+||+++|++.++++. .+. +|||+|||+++++|..
T Consensus       194 ~~~~~~~~~~i-~G~~Tig~EI~eQl~~~~~~~pD~vvvpvG~Ggl~~gi~~~~~~~~~~~~p~vi~Vep~~a~~l~~  270 (396)
T TIGR03528       194 EGYEKIPTWIM-QGYGTLALEALEQLKEQGVEKPTHVFLQAGVGSFAGAVQGYFASAYGEERPITVIVEPDAADCLYR  270 (396)
T ss_pred             cccccCchHHH-HHHhHHHHHHHHHHhhcCCCCCCEEEEcCCcchHHHHHHHHHHHhcCCCCCEEEEEccCCCchHHH
Confidence             5665  3334 599999999999996    26999999999999999999999654 344 5999999999998853

Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.

>PRK03910 D-cysteine desulfhydrase; Validated

Probab=100.00  E-value=2.7e-42  Score=297.35  Aligned_cols=202  Identities=23%  Similarity=0.213  Sum_probs=172.1

Q ss_pred             hHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCC--CchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CChHHHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPC--SSVKDRIAFSMIKDAEEKGLITPGKTVLIECT--SGNTGIG   84 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~pt--Gs~K~R~a~~~~~~a~~~g~~~~g~~~vv~as--sGN~~~a   84 (221)
                      ++++...+++|||++++.|++..|.+||+|+|++||+  ||||||++.+++.+++++|.     ++||++|  +||||.|
T Consensus         6 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~lnp~g~gs~K~R~~~~~l~~a~~~g~-----~~vvt~g~s~gN~g~a   80 (331)
T PRK03910          6 FPRLELAGLPTPLEPLPRLSAALGPDIYIKRDDLTGLALGGNKTRKLEFLLADALAQGA-----DTLITAGAIQSNHARQ   80 (331)
T ss_pred             CCCccccCCCCCceEhhhhhHhhCCcEEEEeccCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCcchhHHHHH
Confidence            4567889999999999999887889999999999997  59999999999999998884     4588775  4899999


Q ss_pred             HHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHcCCEEEEeCCCCChhH-HHHHHHHHHhhCCCe-eecCCCCCC
Q 043209           85 MACFAAAKGYKLILVMPAFMSL--------EKRIILQAYGAQLILTNAEMGIDE-EFRIVEELLNKIPTS-FNPHQFKNP  154 (221)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~--------~~~~~l~~~Ga~V~~v~~~~~~~~-~~~~a~~~~~~~~~~-~~~~~~~n~  154 (221)
                      +|++|+.+|++|++|||...+.        .++..++.+||+|+.++.+.+..+ +...++++.++.+.. ++..++.|+
T Consensus        81 lA~~a~~~G~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~  160 (331)
T PRK03910         81 TAAAAAKLGLKCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAGTDMDAQLEELAEELRAQGRRPYVIPVGGSNA  160 (331)
T ss_pred             HHHHHHHhCCcEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCccchHHHHHHHHHHHHHHcCCceEEECCCCCCc
Confidence            9999999999999999998764        456889999999999987533323 455666666654333 345678899


Q ss_pred             ccHHHHHhhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          155 ANPKTHYETTGPEIWEGTRG---QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       155 ~~~~~g~~t~~~Ei~~q~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      .+.+ |+.+++.||++|++.   +||+||+|+|||||++|++.+|++.+|+++||||||++++.+
T Consensus       161 ~~~~-g~~~~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~  224 (331)
T PRK03910        161 LGAL-GYVACALEIAQQLAEGGVDFDAVVVASGSGGTHAGLAAGLAALGPDIPVIGVTVSRSAAE  224 (331)
T ss_pred             hhHH-HHHHHHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCeEEEEEecCCHHH
Confidence            9987 889999999999963   699999999999999999999999999999999999998654

>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family

Probab=100.00  E-value=4.9e-42  Score=293.50  Aligned_cols=192  Identities=24%  Similarity=0.202  Sum_probs=163.2

Q ss_pred             ccCCCceeecccccCCCCCeEEEEeCCCCCC--CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCChHHHHHHHHHH
Q 043209           15 LIGNTPMVYLNNIVDGCKARIAAKLEMMEPC--SSVKDRIAFSMIKDAEEKGLITPGKTVLIEC--TSGNTGIGMACFAA   90 (221)
Q Consensus        15 ~~~~TPl~~~~~l~~~~g~~i~~K~E~~~pt--Gs~K~R~a~~~~~~a~~~g~~~~g~~~vv~a--ssGN~~~alA~~a~   90 (221)
                      ...+|||+++++|++..|.+||+|+|++||+  ||||||++.+++.+++++|.     ++||++  |+||||.|+|++|+
T Consensus         4 ~~~~TPl~~~~~l~~~~g~~l~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~g~-----~~vv~~g~ssGN~g~alA~~a~   78 (311)
T TIGR01275         4 IPWPTPIQYLPRISREIGAEIYIKRDDLTGLGIGGNKIRKLEYLLADALSKGA-----DTVITVGAIQSNHARATALAAK   78 (311)
T ss_pred             CCCCCcceechhhhhhcCCeEEEEeccCcCCCCCchhHHHHHHHHHHHHHcCC-----CEEEEcCCchhHHHHHHHHHHH
Confidence            3468999999999888889999999999998  99999999999999999984     568888  55999999999999


Q ss_pred             HcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHh----hCC-CeeecCCCCCCccHHHHHhhH
Q 043209           91 AKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLN----KIP-TSFNPHQFKNPANPKTHYETT  164 (221)
Q Consensus        91 ~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~----~~~-~~~~~~~~~n~~~~~~g~~t~  164 (221)
                      .+|+++++|||... +..+...++.+||+|+.++.. +++++.+.++++++    +.+ ..++++++.|+.+.+ |+.++
T Consensus        79 ~~G~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-g~~~~  156 (311)
T TIGR01275        79 KLGLDAVLVLREKEELNGNLLLDKLMGAETRVYSAE-EYFEIMKYAEELAEELEKEGRKPYVIPVGGSNSLGTL-GYVEA  156 (311)
T ss_pred             HhCCceEEEecCCccCCCCHHHHHHcCCEEEEECch-hhhhhHHHHHHHHHHHHhcCCCeEEECCCCCcHHHHH-HHHHH
Confidence            99999999999864 455677789999999999863 25555555555443    222 245668888999887 66789


Q ss_pred             HHHHHHhhCC--CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209          165 GPEIWEGTRG--QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES  213 (221)
Q Consensus       165 ~~Ei~~q~~~--~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s  213 (221)
                      ++||++|++.  ++|+||+|+|||||++|++.+||+.+|+++||||||+.+
T Consensus       157 ~~EI~~q~~~~~~~D~vv~~vGtGgt~~Gi~~~lk~~~~~~~vigV~~~~~  207 (311)
T TIGR01275       157 VLEIATQLESEVKFDSIVVAAGSGGTIAGLSLGLSILNEDIRPVGVAVGRF  207 (311)
T ss_pred             HHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCcEEEEEeccc
Confidence            9999999964  799999999999999999999999999999999998765

This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).

>PRK04346 tryptophan synthase subunit beta; Validated

Probab=100.00  E-value=7.6e-42  Score=298.57  Aligned_cols=196  Identities=17%  Similarity=0.238  Sum_probs=161.4

Q ss_pred             hcccC-CCceeecccccCCC-CCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           13 TELIG-NTPMVYLNNIVDGC-KARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        13 ~~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      .++.| +|||+++++|++.+ +++||+|+|++|||||||+|.+...+..+++.|+    +..|+++|+||||.|+|++|+
T Consensus        52 ~~~~grpTPL~~~~~Ls~~~gg~~IylK~EdlnptGS~K~r~al~~~l~A~~~Gk----~~vIaetgaGnhG~A~A~~aa  127 (397)
T PRK04346         52 KNYVGRPTPLYFAERLSEHLGGAKIYLKREDLNHTGAHKINNVLGQALLAKRMGK----KRIIAETGAGQHGVATATAAA  127 (397)
T ss_pred             HHhcCCCCCceEhHHHHHHcCCCeEEEEECCCCCccchHHHHHHHHHHHHHHcCC----CeEEEecCcHHHHHHHHHHHH
Confidence            45566 59999999999988 5899999999999999999999999999999885    455666899999999999999


Q ss_pred             HcCCeEEEEecCC-CC--HHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeeec-CCCCC----CccHHHH
Q 043209           91 AKGYKLILVMPAF-MS--LEKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFNP-HQFKN----PANPKTH  160 (221)
Q Consensus        91 ~~g~~~~ivvp~~-~~--~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~n----~~~~~~g  160 (221)
                      ++|++|+||||+. .+  ..++..|+.+||+|+.|+. ..+++++.+.+.+ +.++.++.+|+ ++..+    |.++..|
T Consensus       128 ~~Gl~c~I~mp~~d~~rq~~nv~~m~~lGA~Vv~v~~g~~~l~da~~ea~~~~~~~~~~~~y~~gs~~gphp~p~~v~~~  207 (397)
T PRK04346        128 LLGLECVIYMGAEDVERQALNVFRMKLLGAEVVPVTSGSRTLKDAVNEALRDWVTNVEDTHYLIGSVAGPHPYPTMVRDF  207 (397)
T ss_pred             HcCCcEEEEecCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEeCCcCCCCCchHHHHHh
Confidence            9999999999985 33  3577889999999999985 3356666655544 55553354554 33322    3444569


Q ss_pred             HhhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209          161 YETTGPEIWEGTR----GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES  213 (221)
Q Consensus       161 ~~t~~~Ei~~q~~----~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s  213 (221)
                      |++++.||.+|+.    ..||+||+|+|+||+++|++.+|++ .|++|||||||.++
T Consensus       208 q~tig~Ei~eQ~~~~~g~~pD~vVa~VGgGg~~~Gi~~~f~~-~~~v~iigVE~~G~  263 (397)
T PRK04346        208 QSVIGEEAKAQILEKEGRLPDAVVACVGGGSNAIGIFHPFID-DESVRLIGVEAAGK  263 (397)
T ss_pred             cchHHHHHHHHHHHhhCCCCCEEEEecCccHhHHHHHHHHhh-CCCCeEEEEecCCC
Confidence            9999999999984    3699999999999999999999976 89999999999986

>PRK12391 tryptophan synthase subunit beta; Reviewed

Probab=100.00  E-value=1.6e-41  Score=299.45  Aligned_cols=204  Identities=21%  Similarity=0.255  Sum_probs=166.0

Q ss_pred             HHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCChHHHHHH
Q 043209           10 NDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIE-CTSGNTGIGMA   86 (221)
Q Consensus        10 ~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~-assGN~~~alA   86 (221)
                      ..++...++|||+++++|++.+|  .+||+|+|++||+||||+|++..++..+.++|.    .. +++ +|+||+|.|+|
T Consensus        69 ~~~~~~~~~TPL~~~~~L~~~lg~~~~Iy~K~E~~nPtGS~K~R~A~~~a~~a~~~G~----~~-~vtetgsGN~G~alA  143 (427)
T PRK12391         69 REIYRLWRPTPLIRARRLEKALGTPAKIYYKYEGVSPTGSHKPNTAVAQAYYNKKEGI----KR-LTTETGAGQWGSALA  143 (427)
T ss_pred             HHHHcccCCCCeeEchhhHhhhCCCceEEEEEcCCCCCCChHHHHHHHHHHHHHHCCC----CE-EEEccCchHHHHHHH
Confidence            33456778999999999998877  689999999999999999999999999999985    33 555 67899999999


Q ss_pred             HHHHHcCCeEEEEecCC---CCHHHHHHHHHcCCEEEEeCCCCC----------------hhHHHHHHHHHHhhCCCeee
Q 043209           87 CFAAAKGYKLILVMPAF---MSLEKRIILQAYGAQLILTNAEMG----------------IDEEFRIVEELLNKIPTSFN  147 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~---~~~~~~~~l~~~Ga~V~~v~~~~~----------------~~~~~~~a~~~~~~~~~~~~  147 (221)
                      ++|+.+|++|+||||+.   .++.++..|+.+||+|+.++.+.+                ...++..+.+.+++.++.+|
T Consensus       144 ~aaa~~Gl~~~V~mp~~s~~~k~~r~~~mr~~GA~Vi~~~~~~~~~~~~~~~~~~~~~gsl~~ai~~A~e~a~~~~~~~y  223 (427)
T PRK12391        144 LACALFGLECTVFMVRVSYEQKPYRRSLMETYGAEVIPSPSDLTEAGRKILAEDPDHPGSLGIAISEAVEDAAKRPDTKY  223 (427)
T ss_pred             HHHHHcCCcEEEEEecCCcccCHHHHHHHHHCCCEEEEECCchhhhhhhhhhcCccccccHHHHHHHHHHHHHhCCCcEE
Confidence            99999999999999974   356789999999999999976411                11145666677666545445


Q ss_pred             cCCCCCCccHHHHHhhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHh---cC-CCcEEEEEeCCCCccCCCC
Q 043209          148 PHQFKNPANPKTHYETTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKK---KN-PEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       148 ~~~~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~---~~-~~~kvigVe~~~s~~~~~~  219 (221)
                      ...+.+. +...||.++|.||.+|+.   ..||+||+|+|+||+++|++.+|.+   .+ +++|||+|||++|++|+.|
T Consensus       224 ~~~s~~~-~~~~~~~~ig~Ei~~Ql~~~g~~pD~Vv~~vG~Gg~~aGi~~~f~~~~~~g~~~~riiaVEp~~~~~l~~g  301 (427)
T PRK12391        224 ALGSVLN-HVLLHQTVIGLEAKKQLELAGEYPDVVIGCVGGGSNFAGLAFPFLGDKLEGKKDTRFIAVEPAACPTLTKG  301 (427)
T ss_pred             EcCCCCc-HHHhhHHHHHHHHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHHHhcCCCCceEEEEeeccchhhccc
Confidence            4333222 344599999999999995   3699999999999999999987733   34 8899999999999999765

>PLN02618 tryptophan synthase, beta chain

Probab=100.00  E-value=1.2e-41  Score=297.79  Aligned_cols=198  Identities=18%  Similarity=0.272  Sum_probs=160.8

Q ss_pred             HhhcccC-CCceeecccccCCC------CCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209           11 DITELIG-NTPMVYLNNIVDGC------KARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus        11 ~~~~~~~-~TPl~~~~~l~~~~------g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      .+..++| +|||+++++|++.+      |++||+|+|++|||||||+|.+...+..+++.|+    +..|+++|+||||.
T Consensus        58 ~l~~~vGr~TPL~~~~~Ls~~~g~~~~~g~~IylK~E~lnptGS~K~R~a~~~~l~A~~~g~----~~vIaesgaGNhG~  133 (410)
T PLN02618         58 ILKDYVGRETPLYFAERLTEHYKRADGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGK----KRIIAETGAGQHGV  133 (410)
T ss_pred             HHHHhcCCCCceeEhhhHHHHhccccCCCCEEEEEeCCCCCccchHHHHHHHHHHHHHHcCC----CEEEEEcCcHHHHH
Confidence            3567786 89999999999876      4899999999999999999999999998888874    34455667899999


Q ss_pred             HHHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCC-CCChhHHHH-HHHHHHhhCCCeeec-CCCC--CC-
Q 043209           84 GMACFAAAKGYKLILVMPAFM---SLEKRIILQAYGAQLILTNA-EMGIDEEFR-IVEELLNKIPTSFNP-HQFK--NP-  154 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~---~~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~-~a~~~~~~~~~~~~~-~~~~--n~-  154 (221)
                      |+|++|+.+|++|+||||...   ...|+..|+.+||+|+.|+. +.+++++.. .+++++++.++.+|+ .+..  +| 
T Consensus       134 AlA~aaa~~Gl~~~I~m~~~~~~~~~~nv~~mr~lGA~Vi~v~~g~~~~~dA~~ea~~~~~~~~~~~~yi~gs~~gp~P~  213 (410)
T PLN02618        134 ATATVCARFGLECIVYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPY  213 (410)
T ss_pred             HHHHHHHHcCCcEEEEEcCCchhhhhhhHHHHHHCCCEEEEEeCCCCCHHHHHHHHHHHHHhccCCCEEEecCcCCCCCC
Confidence            999999999999999999853   34567799999999999954 345778774 445677664455555 2221  22 


Q ss_pred             -ccHHHHHhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209          155 -ANPKTHYETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES  213 (221)
Q Consensus       155 -~~~~~g~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s  213 (221)
                       .....++.++|.||.+|+    +..||+||+|+|+||+++|++.+|+. +|++|||||||+++
T Consensus       214 ~~~v~~~q~tig~Ei~~Q~~~~~g~~pD~VV~~VGgGg~~~Gi~~~f~~-~~~v~ligVEa~G~  276 (410)
T PLN02618        214 PMMVRDFHSVIGKETRRQAMEKWGGKPDVLVACVGGGSNAMGLFHEFID-DEDVRLIGVEAAGF  276 (410)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHHh-CCCceEEEEEeCCC
Confidence             233358999999997776    34699999999999999999999975 79999999999997

>TIGR00263 trpB tryptophan synthase, beta subunit

Probab=100.00  E-value=1.2e-41  Score=298.25  Aligned_cols=196  Identities=18%  Similarity=0.235  Sum_probs=160.5

Q ss_pred             hccc-CCCceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           13 TELI-GNTPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        13 ~~~~-~~TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ..+. .+|||+++++|++.+| .+||+|+|++|||||||||.+..++..+++.|.    ...|+++|+||||+|+|++|+
T Consensus        44 ~~~~~~~TPL~~~~~l~~~~g~~~iy~K~E~~nptGS~K~R~a~~~~~~a~~~g~----~~vi~e~ssGN~G~alA~~a~  119 (385)
T TIGR00263        44 RNYAGRPTPLTFAPNLTEALGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----KRIIAETGAGQHGVATATAAA  119 (385)
T ss_pred             HHhCCCCCCceehHHHHHHhCCCeEEEEeCCCCCCccchHHHHHHHHHHHHHcCC----CEEEEEcCcHHHHHHHHHHHH
Confidence            3344 4899999999998887 799999999999999999999999999988874    344557999999999999999


Q ss_pred             HcCCeEEEEecCC-CCH--HHHHHHHHcCCEEEEeCCC-CChhHHH-HHHHHHHhhCCCeeec-CCCCC----CccHHHH
Q 043209           91 AKGYKLILVMPAF-MSL--EKRIILQAYGAQLILTNAE-MGIDEEF-RIVEELLNKIPTSFNP-HQFKN----PANPKTH  160 (221)
Q Consensus        91 ~~g~~~~ivvp~~-~~~--~~~~~l~~~Ga~V~~v~~~-~~~~~~~-~~a~~~~~~~~~~~~~-~~~~n----~~~~~~g  160 (221)
                      .+|++|+||||+. .+.  .+++.++.+||+|+.++.. ..++++. ..++++.++.++.+|+ +++.|    +.++..|
T Consensus       120 ~~Gl~~~Iv~p~~~~~~~~~~~~~~~~~GA~Vv~v~~~~~~~~~a~~~~~~~~~~~~~~~~y~~~~~~~~~p~~~~~~~~  199 (385)
T TIGR00263       120 LLGLDCEVYMGAEDVERQKPNVFRMELLGAKVIPVTSGSGTLKDAVNEALRDWVTSVDDTHYVLGSAVGPHPFPTMVRDF  199 (385)
T ss_pred             HcCCCEEEEecCCcccccchHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHHhcCCceEEeCCcCCCCCchHHHHHH
Confidence            9999999999985 333  5788899999999999753 3466664 4445556654455555 44442    2455569


Q ss_pred             HhhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209          161 YETTGPEIWEGTR----GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES  213 (221)
Q Consensus       161 ~~t~~~Ei~~q~~----~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s  213 (221)
                      ++|++.||++|+.    ..||+||+|+|+||+++|++.+|.+ .|++|||||||+++
T Consensus       200 ~~t~g~Ei~~Ql~~~~~~~pD~vv~~vG~Gg~~~Gv~~~~~~-~~~~~iigVe~~gs  255 (385)
T TIGR00263       200 QSVIGEEAKEQILEQEGRLPDAVIACVGGGSNAIGIFYAFID-DPSVQLIGVEAGGL  255 (385)
T ss_pred             hhHHHHHHHHHHHhhhCCCCCEEEEEeCchHHHHHHHHHHhh-CCCCeEEEEEeCCC
Confidence            9999999999983    2589999999999999999998865 69999999999996

Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. the beta chain contains the functional domain for or the synthesis of tryptophan from indole and serine. The enzyme requires pyridoxal-phosphate as a cofactor. The pyridoxal-P attachment site is contained within the conserved region [LIVM]-x-H-x-G-[STA]-H-K-x-N] [K is the pyridoxal-P attachment site] which is present between residues 90-100 of the model.

>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=3.7e-41  Score=309.56  Aligned_cols=201  Identities=17%  Similarity=0.226  Sum_probs=169.9

Q ss_pred             hhcccC-CCceeecccccCC----CC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 043209           12 ITELIG-NTPMVYLNNIVDG----CK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIG   84 (221)
Q Consensus        12 ~~~~~~-~TPl~~~~~l~~~----~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~a   84 (221)
                      ..+++| +|||+++++|++.    +|  .+||+|+|++|||||||||.+.+++..+++.|+    .+.|+++|+||||.|
T Consensus       319 ~~~~iGrpTPL~~~~~Ls~~l~~~~G~g~~IylK~E~lNpTGS~KdR~Al~~i~~A~~~G~----~~~IvetssGNhG~A  394 (695)
T PRK13802        319 NQRYVGRPSPLTEAPRFAERVKEKTGLDARVFLKREDLNHTGAHKINNALGQALLVKRMGK----TRVIAETGAGQHGVA  394 (695)
T ss_pred             HHhcCCCCCceeEchhhhhhhHhhcCCCceEEEEEccCCCcCCcHHHHHHHHHHHHHHcCC----CCEEEEECcHHHHHH
Confidence            356788 9999999988753    44  799999999999999999999999999999986    456889999999999


Q ss_pred             HHHHHHHcCCeEEEEecCC---CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHH-HHHHhhCC-CeeecCCCCCC----
Q 043209           85 MACFAAAKGYKLILVMPAF---MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIV-EELLNKIP-TSFNPHQFKNP----  154 (221)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~---~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a-~~~~~~~~-~~~~~~~~~n~----  154 (221)
                      +|++|+++|++|+||||..   .+..|+..|+.+||+|+.++.. .+++++.+.+ +++.++.+ ..|+++++.|+    
T Consensus       395 lA~aaA~~Gl~c~Ivmp~~~~~~~~~nv~~mr~lGAeVi~v~~g~~~l~~Ai~ea~~~~~~~~~~~~y~i~~~~g~~P~p  474 (695)
T PRK13802        395 TATVCAMLGLKCRIYMGQIDARRQALNVARMRMLGAEVVEVTLGDRILKDAINEALRDWVTNVKDTHYLLGTVAGPHPFP  474 (695)
T ss_pred             HHHHHHHcCCCEEEEEeCCcccccHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHHHhcCCceEeecccCCCCCcH
Confidence            9999999999999999985   3678999999999999999843 2567776555 55666533 45778888654    


Q ss_pred             ccHHHHHhhHHHHHHHhhCC-----CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          155 ANPKTHYETTGPEIWEGTRG-----QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       155 ~~~~~g~~t~~~Ei~~q~~~-----~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      .++..|+.++|.||++|+..     .||+||+|+|+||+++|++.+|+. .|++|||||||.++....
T Consensus       475 ~~v~agq~tiG~EI~eQ~~~~~g~~~pD~VVa~VGgGg~~~Gi~~~f~~-~~~vkligVE~~g~g~~~  541 (695)
T PRK13802        475 AMVRDFQKIIGEEAKQQLQDWYGIDHPDAICACVGGGSNAIGVMNAFLD-DERVNLYGYEAGGNGPES  541 (695)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEEcCCchHHHHHHHHHHHh-CCCceEEEEEecCCCccc
Confidence            34557999999999999952     699999999999999999999966 789999999999975443

>cd06446 Trp-synth_B Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions

Probab=100.00  E-value=3.1e-41  Score=293.98  Aligned_cols=196  Identities=17%  Similarity=0.194  Sum_probs=160.3

Q ss_pred             CCCceeecccccCCC-CCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCChHHHHHHHHHHHcCC
Q 043209           17 GNTPMVYLNNIVDGC-KARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIE-CTSGNTGIGMACFAAAKGY   94 (221)
Q Consensus        17 ~~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~-assGN~~~alA~~a~~~g~   94 (221)
                      .+|||+++++|++.+ +.+||+|+|++|||||||||.+..++..+.++|.    .. +|+ +|+||||+|+|++|+.+|+
T Consensus        33 ~~TPL~~l~~l~~~~g~~~l~~K~E~~nptgS~K~R~a~~~~~~a~~~g~----~~-vv~~~ssGN~g~alA~~a~~~G~  107 (365)
T cd06446          33 RPTPLYRAKRLSEYLGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----KR-VIAETGAGQHGVATATACALFGL  107 (365)
T ss_pred             CCCCceehHHHHHhhCCceEEEEeccCCCccchhHHHHHHHHHHHHHcCC----Ce-EEEecCchHHHHHHHHHHHHhCC
Confidence            589999999998877 5899999999999999999999999999998884    33 555 6899999999999999999


Q ss_pred             eEEEEecCCCC---HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHH-HhhC-CCeeecCCC----CCCccHHHHHhhH
Q 043209           95 KLILVMPAFMS---LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEEL-LNKI-PTSFNPHQF----KNPANPKTHYETT  164 (221)
Q Consensus        95 ~~~ivvp~~~~---~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~-~~~~-~~~~~~~~~----~n~~~~~~g~~t~  164 (221)
                      +|+||+|...+   ..++..++.+||+|+.++.. ..+++++..+.+. .++. ..+|+++++    .++.++.+|+.|+
T Consensus       108 ~~~ivvp~~~~~~~~~~~~~~~~~GAeV~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ag~~t~  187 (365)
T cd06446         108 ECEIYMGAVDVERQPLNVFRMELLGAEVVPVPSGSGTLKDAISEAIRDWVTNVEDTHYLLGSVVGPHPYPNMVRDFQSVI  187 (365)
T ss_pred             CeEEEEcCCccccccchHHHHHHCCCEEEEeCCCCCcHHHHHHHHHHHHHhccCCceEecccccCCCCchHHHHHhhhHH
Confidence            99999998633   35778899999999999864 2356665444443 4432 234444433    2234567799999


Q ss_pred             HHHHHHhhCC----CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          165 GPEIWEGTRG----QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       165 ~~Ei~~q~~~----~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                      ++||++|++.    .||+||+|+|+||+++|++.++++ .+++|||||||++++.+.+
T Consensus       188 ~~EI~~Q~~~~~~~~~D~vv~~vG~GGt~~Gi~~g~~~-~~~~~vigVep~gs~~~~~  244 (365)
T cd06446         188 GEEAKKQILEKEGELPDVVIACVGGGSNAAGLFYPFIN-DKDVKLIGVEAGGCGLETG  244 (365)
T ss_pred             HHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHh-CCCceEEEEcCCCCccccc
Confidence            9999999962    699999999999999999999887 5689999999999988864

In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to glyceraldehyde 3-phosphate and indole at the active site of the alpha subunit. In the beta reaction, indole undergoes a PLP-dependent reaction with L-serine to form L-tryptophan at the active site of the beta subunit. Members of this CD, Trp-synth_B, are found in all three major phylogenetic divisions.

>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=100.00  E-value=5.4e-42  Score=291.87  Aligned_cols=194  Identities=37%  Similarity=0.504  Sum_probs=163.8

Q ss_pred             hhcccCCCceeecc--cccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLN--NIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        12 ~~~~~~~TPl~~~~--~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      |+.++++|||++++  .+++..+.+||+|+|++|||||||||++.+++.++++++     .+.|+++|+||||.|+|++|
T Consensus         1 i~~~~~~TPl~~~~~~~~~~~~~~~i~~K~E~~~ptgs~K~R~a~~~l~~a~~~~-----~~~vv~assGN~g~a~A~~a   75 (306)
T PF00291_consen    1 ISLGIGPTPLVRLPSRLLSELGGANIYLKREDLNPTGSFKDRGAYYLLSRAKEKG-----GRTVVGASSGNHGRALAYAA   75 (306)
T ss_dssp             GGGGSSSS-EEEEHEHHHHHCTTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTT-----TSEEEEESSSHHHHHHHHHH
T ss_pred             CcCCCcCCCEEECccccchhccCCeEEEEECCCCCcCCcccccchhhhhhccccc-----cceeeeeccCCceehhhhhh
Confidence            46789999999964  555667799999999999999999999999999999886     45699999999999999999


Q ss_pred             HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhh-------CCCeeecCCCCCCccHHHHHh
Q 043209           90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNK-------IPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~-------~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +.+|++|++|+|++.+..+++.++.+|++|+.++..  ++++.+.+++++++       .++.  +++++|+ +...||.
T Consensus        76 ~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~g~~  150 (306)
T PF00291_consen   76 ARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD--VEGAFDDAQELAKERAELLSPFNGE--LNQYNNP-NVIAGYA  150 (306)
T ss_dssp             HHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST--HHHHHHHHHHHHHHHHHHHHHSTTE--ESTTTSH-HHHHHHH
T ss_pred             hhccccceeeeccccccccccceeeecceEEEcccc--ccccccccccccccccccccccccc--cCcccch-hhhhhhh
Confidence            999999999999999999999999999999998774  44444444444332       1122  6677444 4446999


Q ss_pred             hHHHHHHHhhCCCCCE--EEEccCchhHHHHHHHHHHh--cCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTRGQVDI--FVSGIGTGGTVSGVGNFLKK--KNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~--vv~p~G~Gg~~~Gi~~~~~~--~~~~~kvigVe~~~s~~~~  217 (221)
                      +++.||++|++ .||.  ||+|+|+||+++|++.+++.  . |.+|||+|||.+++++.
T Consensus       151 ~~~~Ei~~q~~-~~d~d~vvv~~GtGg~~~Gi~~~~~~~~~-~~~~vigv~~~~~~~~~  207 (306)
T PF00291_consen  151 TIGLEIYEQLG-KPDPDYVVVPVGTGGTAAGIAAGLKELIL-PPVRVIGVEPEGSDPLY  207 (306)
T ss_dssp             HHHHHHHHHHT-TESESEEEEEESSSHHHHHHHHHHHHHCH-TTSEEEEEEETTGHHHH
T ss_pred             hcchhcccccc-cccceEEEecCCchhHHHHHHhhhhhhhc-ccccceeeeccCCcccc
Confidence            99999999996 6665  99999999999999999999  7 89999999999987764

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....

>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia

Probab=100.00  E-value=3e-41  Score=288.17  Aligned_cols=192  Identities=24%  Similarity=0.260  Sum_probs=160.5

Q ss_pred             CceeecccccCCC--CCeEEEEeCCCCCC---CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCChHHHHHHHHHHH
Q 043209           19 TPMVYLNNIVDGC--KARIAAKLEMMEPC---SSVKDRIAFSMIKDAEEKGLITPGKTVLIEC--TSGNTGIGMACFAAA   91 (221)
Q Consensus        19 TPl~~~~~l~~~~--g~~i~~K~E~~~pt---Gs~K~R~a~~~~~~a~~~g~~~~g~~~vv~a--ssGN~~~alA~~a~~   91 (221)
                      |||+++++|++.+  +.+||+|+|++||+   ||||||++.+++.+++++|.     ++||++  |+||||+|+|++|+.
T Consensus         1 TPl~~~~~l~~~~g~~~~l~~K~E~~np~gsfgs~K~R~~~~~l~~a~~~g~-----~~vv~~ggs~GN~g~alA~~a~~   75 (307)
T cd06449           1 TPIQYLPRLSEHLGGKVEIYAKRDDCNSGLAFGGNKIRKLEYLLPDALAKGA-----DTLVTVGGIQSNHTRQVAAVAAK   75 (307)
T ss_pred             CcccchhHHHHhhCCCCcEEEecccccCCCCccchHHHHHHHHHHHHHHcCC-----CEEEECCCchhHHHHHHHHHHHH
Confidence            8999999998877  57999999999998   57799999999999999884     458888  579999999999999


Q ss_pred             cCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCCC--hhHHHHHH-HHHHhhCCCeee-cCCC-CCCccHH
Q 043209           92 KGYKLILVMPAFMS--------LEKRIILQAYGAQLILTNAEMG--IDEEFRIV-EELLNKIPTSFN-PHQF-KNPANPK  158 (221)
Q Consensus        92 ~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~~~~~--~~~~~~~a-~~~~~~~~~~~~-~~~~-~n~~~~~  158 (221)
                      +|++|++|||.+.+        ..|++.++.+||+|+.++.+.+  ..++...+ +.+.++.+..++ .+++ +|+.+++
T Consensus        76 ~G~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (307)
T cd06449          76 LGLKCVLVQENWVPYSDAVYDRVGNILLSRIMGADVRLVSAGFDIGIRKSFEEAAEEVEAKGGKPYVIPAGGSEHPLGGL  155 (307)
T ss_pred             cCCeEEEEecCCCCcccccccccccHHHHHHCCCEEEEECCcchhhHHHHHHHHHHHHHHcCCceEEecCCCCCCcccHH
Confidence            99999999999766        3688899999999999987521  12223333 333333323344 4555 4999997


Q ss_pred             HHHhhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          159 THYETTGPEIWEGTRG---QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       159 ~g~~t~~~Ei~~q~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                       ||.+++.||++|++.   .||+||+|+|||||++|++.+|++.+|++|||+|||++++.+
T Consensus       156 -G~~t~~~Ei~~q~~~~~~~~d~vv~~~GtGgt~~G~~~~~~~~~~~~~ii~V~~~~~~~~  215 (307)
T cd06449         156 -GYVGFVLEIAQQEEELGFKFDSIVVCSVTGSTHAGLSVGLAALGRQRRVIGIDASAKPEK  215 (307)
T ss_pred             -HHHHHHHHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHhcCCCCeEEEEEecCchHH
Confidence             899999999999964   699999999999999999999999999999999999998765

>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase

Probab=100.00  E-value=6.9e-41  Score=289.21  Aligned_cols=203  Identities=19%  Similarity=0.167  Sum_probs=169.3

Q ss_pred             hhHHhhcccCCCceeecccccCCCCC--eEEEEeCCCCCC---CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCh
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKA--RIAAKLEMMEPC---SSVKDRIAFSMIKDAEEKGLITPGKTVLIEC--TSGN   80 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~--~i~~K~E~~~pt---Gs~K~R~a~~~~~~a~~~g~~~~g~~~vv~a--ssGN   80 (221)
                      -++++...+++|||++++++++.+|.  +||+|+|++||+   ||||||.+.+++.+++++|.     ++|+++  |+||
T Consensus         4 ~~~~~~l~~g~TPl~~~~~l~~~~g~~~~l~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~-----~~vvs~ggs~gN   78 (337)
T TIGR01274         4 RFPRYPLTFGPSPIHPLPRLSQHLGGKVTLYAKREDCNSGLAFGGNKTRKLEYLIPDAQAQGC-----TTLVSIGGIQSN   78 (337)
T ss_pred             cCCccccCCCCCCceEhHhhHHhcCCCceEEEEccCCcCCcCccchHHHHHHHHHHHHHHcCC-----CEEEECCCCcch
Confidence            35677888999999999999988774  999999999976   78899999999999999984     557876  6699


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC--ChhHHHHHHHHHHhhC-CCeeecC
Q 043209           81 TGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTNAEM--GIDEEFRIVEELLNKI-PTSFNPH  149 (221)
Q Consensus        81 ~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~~~~--~~~~~~~~a~~~~~~~-~~~~~~~  149 (221)
                      ||+|+|++|+.+|++|+||+|+..+        ..|+..++.+||+|+.++...  +..++...+.+..++. +..++++
T Consensus        79 ~g~alA~~a~~~Gl~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA~v~~v~~~~~~~~~~~~~~a~~~~~~~~~~~~~i~  158 (337)
T TIGR01274        79 QTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQLSRIMGADVRLDPDGFDIGHRNSWERALEEVRGAGGKPYPIP  158 (337)
T ss_pred             HHHHHHHHHHHcCCcEEEEeccCCCccccchhccchHHHHHHcCCEEEEeCCcccccchHHHHHHHHHHHhcCCceEEeC
Confidence            9999999999999999999998542        578999999999999998641  1235555555555554 2346665


Q ss_pred             CCC--CCccHHHHHhhHHHHHHHhh---CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          150 QFK--NPANPKTHYETTGPEIWEGT---RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       150 ~~~--n~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      .+.  |+.... |+.++++||.+|+   +.+||+||+|+|||||++|++.+|++.+|++|||||||++++.+
T Consensus       159 ~~~~~~~~~~~-G~~~~~~Ei~eq~~~~~~~~D~vvv~vGtGgt~aGl~~~~~~~~~~~~vigV~~~~~~~~  229 (337)
T TIGR01274       159 AGCSDHPLGGL-GFVGFAFEVREQEGELGFKFDYVVVCSVTGSTQAGMVAGFAADGRKDRVIGIDASATPEQ  229 (337)
T ss_pred             CCCCCCccchh-HHHHHHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEEecCCHHH
Confidence            553  466665 8899999999995   34799999999999999999999999999999999999999765

This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.

>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional

Probab=100.00  E-value=7.9e-41  Score=288.88  Aligned_cols=204  Identities=18%  Similarity=0.153  Sum_probs=168.7

Q ss_pred             hhHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCC---CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCh
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPC---SSVKDRIAFSMIKDAEEKGLITPGKTVLIEC--TSGN   80 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~pt---Gs~K~R~a~~~~~~a~~~g~~~~g~~~vv~a--ssGN   80 (221)
                      -++++...+++|||++++++++..|  .+||+|+|++||+   ||+|||.+.+++.+++++|.     .+|+++  |+||
T Consensus         5 ~~~~~~l~~g~TPL~~~~~l~~~~g~~~~v~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~-----~~vvs~G~s~GN   79 (337)
T PRK12390          5 KFPRYPLTFGPTPIHPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGA-----DTLVSIGGVQSN   79 (337)
T ss_pred             CCCccccCCCCCcceeHHHHHHHhCCCCeEEEEeCCCCCCCCccchhHHHHHHHHHHHHHcCC-----CEEEEeCCCccH
Confidence            3557788899999999999888777  7999999999987   78899999999999999984     557877  7799


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCC--ChhHHHHHHHHHHhhCCCeee-cC
Q 043209           81 TGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTNAEM--GIDEEFRIVEELLNKIPTSFN-PH  149 (221)
Q Consensus        81 ~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~~~~--~~~~~~~~a~~~~~~~~~~~~-~~  149 (221)
                      ||+|+|++|+.+|++|++|+|...+        ..++..++.+||+|+.++.+.  .+.++.+.+.+..++..+..| ++
T Consensus        80 ~g~alA~aa~~~G~~~~iv~~~~~p~~~~~~~~~~~~~~~~~~GA~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (337)
T PRK12390         80 HTRQVAAVAAHLGMKCVLVQENWVNYEDAVYDRVGNILLSRIMGADVRLVPDGFDIGIRKSWEDALEDVRAAGGKPYAIP  159 (337)
T ss_pred             HHHHHHHHHHHcCCeEEEEeCCCCCCccchhhccccHHHHHHCCCEEEEeCCCcchhHHHHHHHHHHHHHhCCCceEEeC
Confidence            9999999999999999999876543        236778999999999998741  233666667666666434344 55


Q ss_pred             CCCC--CccHHHHHhhHHHHHHHh---hCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          150 QFKN--PANPKTHYETTGPEIWEG---TRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       150 ~~~n--~~~~~~g~~t~~~Ei~~q---~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      .+.+  +...+ |+.++++||++|   ++.++|+||+|+|||||++|++.+|++.+|++|||||||++++.+.
T Consensus       160 ~~~~~~~~~~~-G~~~~a~Ei~~q~~~~~~~~d~vvv~vGtGgtlaGi~~~~k~~~~~~rvigV~~~~~~~~~  231 (337)
T PRK12390        160 AGASDHPLGGL-GFVGFAEEVRAQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRARRVIGIDASAKPEQT  231 (337)
T ss_pred             CcCCCCCcccH-HHHHHHHHHHHHHHhcCCCCCEEEEecCcchhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence            5433  44444 889999999998   4447999999999999999999999999999999999999987764

>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional

Probab=100.00  E-value=7.5e-41  Score=288.03  Aligned_cols=201  Identities=21%  Similarity=0.230  Sum_probs=168.2

Q ss_pred             cchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCC--CchhhHHHHHHHHHHHHcCCCCCCCeEEE--eeCCChH
Q 043209            6 CAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPC--SSVKDRIAFSMIKDAEEKGLITPGKTVLI--ECTSGNT   81 (221)
Q Consensus         6 ~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~pt--Gs~K~R~a~~~~~~a~~~g~~~~g~~~vv--~assGN~   81 (221)
                      +..++++.+.+++|||++++++++..|++||+|+|++||+  ||||+|++.+++.+++++|.     .+|+  ++|+|||
T Consensus         9 ~~~~~~~~l~~~~TPl~~~~~l~~~~g~~v~~K~E~l~~~~~gg~K~R~~~~~l~~a~~~G~-----~~vv~~~~ssGN~   83 (329)
T PRK14045          9 LSKFPRVELIPWETPIQYLPNISRELGADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGA-----DVVITVGAVHSNH   83 (329)
T ss_pred             hhcCCCcccCCCCCCcccchhhHHHhCCeEEEEcccccCCCCCcchHHHHHhHHHHHHHcCC-----CEEEEeCccHHHH
Confidence            4456789999999999999999888889999999999996  89999999999999999884     3466  5899999


Q ss_pred             HHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHcCCEEEEeCCCCC---hhHHHHHHHHHHhhCCCeee-cCCCCCCcc
Q 043209           82 GIGMACFAAAKGYKLILVMPAFMSLE-KRIILQAYGAQLILTNAEMG---IDEEFRIVEELLNKIPTSFN-PHQFKNPAN  156 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~~~~~-~~~~l~~~Ga~V~~v~~~~~---~~~~~~~a~~~~~~~~~~~~-~~~~~n~~~  156 (221)
                      ++|+|++|+.+|++|++|+|...+.. +...++.+||+++.++...+   .+.+.+.++++.++.+..++ .+++.|+.+
T Consensus        84 g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~~Ga~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~~~n~~~  163 (329)
T PRK14045         84 AFVTGLAAKKLGLDAVLVLRGKEELKGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAEELKGEGRKPYIIPPGGASPVG  163 (329)
T ss_pred             HHHHHHHHHHcCCeEEEEEeCCCCCCcCHHHHHHCCCEEEEECCCcccchHHHHHHHHHHHHhcCCCEEEECCCCCchhH
Confidence            99999999999999999999865433 56677999999998874322   23556666676666544555 466789988


Q ss_pred             HHHHHhhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209          157 PKTHYETTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE  212 (221)
Q Consensus       157 ~~~g~~t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~  212 (221)
                      .. |+.+...||++|++   .++|+||+|+|||||++|++.+++..+|++|||||+|.+
T Consensus       164 ~~-g~~~~~~EI~~q~~~~~~~~d~vv~~vGtGGt~aGi~~~lk~~~~~~kVigv~~~~  221 (329)
T PRK14045        164 TL-GYVRAVGEIATQVKKLGVRFDSIVVAVGSGGTLAGLSLGLAILNAEWRVVGIAVGS  221 (329)
T ss_pred             HH-HHHHHHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence            87 55555559999996   379999999999999999999999999999999999976

>TIGR03844 cysteate_syn cysteate synthase

Probab=100.00  E-value=8.3e-41  Score=293.20  Aligned_cols=196  Identities=13%  Similarity=0.086  Sum_probs=167.8

Q ss_pred             hcccCCCceeecccccCCCCC-eEEEEeCC-------CCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 043209           13 TELIGNTPMVYLNNIVDGCKA-RIAAKLEM-------MEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIG   84 (221)
Q Consensus        13 ~~~~~~TPl~~~~~l~~~~g~-~i~~K~E~-------~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~a   84 (221)
                      ....+.|||+++++|++.+|. ++|+|+|.       +|||||||||++.+++..+.+.|     .+.|+++|+||||.|
T Consensus        57 ~~~~g~tpl~~~~~L~~~lG~~~v~~K~e~~~~K~E~~npTGSFKdRga~~~i~~a~~~g-----~~~Vv~aSsGN~g~a  131 (398)
T TIGR03844        57 LRTRGGPVTYKSEGLARELGLSDLYITFSGYWPERGAFMRTCSFKELEALPTMQRLKERG-----GKTLVVASAGNTGRA  131 (398)
T ss_pred             CCCCCCCceeehHHHHHHhCCCeEEEEecCcccchhccCCccccHHHHHHHHHHHHHHcC-----CCEEEEECCCHHHHH
Confidence            346677999999999998997 99995554       89999999999999999999887     456999999999999


Q ss_pred             HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhH
Q 043209           85 MACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETT  164 (221)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~  164 (221)
                      +|++|+.+|++|+||||.+.+..+....+.+|++|+.++++  |+++.+.+++++++. +++..++++|++.++ |++|+
T Consensus       132 lA~~aa~~Gi~~~I~vP~~~~~~~~~~~~~~ga~vv~v~g~--~d~a~~~a~~~a~~~-g~~~~~~~~~p~~ie-G~~Ti  207 (398)
T TIGR03844       132 FAEVSAITGQPVILVVPKSSADRLWTTEPASSVLLVTVDGD--YTDAIALADRIATLP-GFVPEGGARNVARRD-GMGTV  207 (398)
T ss_pred             HHHHHHHcCCcEEEEECCChHHHHHHHhhCCcEEEEECCCC--HHHHHHHHHHHHHhC-CccccCCCCCHHHHh-hHHHH
Confidence            99999999999999999975433333347899999999875  899999999998876 665556678898886 99999


Q ss_pred             HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-------CCcEEEEEeCCCCccCC
Q 043209          165 GPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-------PEIKVYGVEPAESAILN  217 (221)
Q Consensus       165 ~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-------~~~kvigVe~~~s~~~~  217 (221)
                      ++||++|++..||+||+|+|+|.++.|++.+++++.       .-+|+++|||+++++|.
T Consensus       208 ~~Ei~eql~~~PD~VvvPvG~G~~~~~~~~~~~~l~~~g~i~~~~P~l~~VQ~eg~~p~~  267 (398)
T TIGR03844       208 MLDAAVTIGSLPDHYFQAVGSGTGGIAAWEAAMRLIEDGRFGSKLPRLHLAQNLPFVPMV  267 (398)
T ss_pred             HHHHHHHcCCCCCEEEEecCCCHHHHHHHHHHHHHHHcCCccCCCCCEEEEEcCCchHHH
Confidence            999999996449999999999999999999998842       34789999999998774

Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.

>PRK13803 bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=2.2e-39  Score=297.55  Aligned_cols=196  Identities=20%  Similarity=0.224  Sum_probs=161.1

Q ss_pred             hcccC-CCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           13 TELIG-NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        13 ~~~~~-~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      ..+.+ +|||+++++|++.+|.+||+|+|++|||||||+|.+...+..+++.|.    ...|+++|+||||+|+|++|+.
T Consensus       265 ~~~~grpTPL~~~~~Ls~~~G~~IylK~E~lnptGS~K~r~al~~~~~a~~~g~----~~vi~e~gsGnhG~A~A~~aa~  340 (610)
T PRK13803        265 QNYAGRPTPLTEAKRLSDIYGARIYLKREDLNHTGSHKINNALGQALLAKRMGK----TRIIAETGAGQHGVATATACAL  340 (610)
T ss_pred             HHhCCCCCcceeHHHHHHhhCCEEEEEeCCCCCcccHHHHHHHHHHHHHHHcCC----CEEEEecChHHHHHHHHHHHHH
Confidence            34454 799999999998889999999999999999999999999999988884    4446678999999999999999


Q ss_pred             cCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHH-HHHHhhCCCeeecCCCC---C--CccHHHHH
Q 043209           92 KGYKLILVMPAFM---SLEKRIILQAYGAQLILTNAE-MGIDEEFRIV-EELLNKIPTSFNPHQFK---N--PANPKTHY  161 (221)
Q Consensus        92 ~g~~~~ivvp~~~---~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a-~~~~~~~~~~~~~~~~~---n--~~~~~~g~  161 (221)
                      +|++|+||||...   ...++..|+.+||+|+.++.. .++.++.+.+ +++..+.++.+|+.++.   +  |.++..|+
T Consensus       341 ~Gl~~~I~m~~~~~~~~~~nv~~m~~~GA~Vi~v~~~~~~~~~a~~~a~~~~~~~~~~~~y~~~~~~g~~p~p~~v~~~~  420 (610)
T PRK13803        341 FGLKCTIFMGEEDIKRQALNVERMKLLGANVIPVLSGSKTLKDAVNEAIRDWVASVPDTHYLIGSAVGPHPYPEMVAYFQ  420 (610)
T ss_pred             cCCcEEEEEeCCcccchhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCcCCCCCcHHHHHHHh
Confidence            9999999999863   356788999999999999852 3466665444 44434444666664432   2  34444589


Q ss_pred             hhHHHHHHHhhCC----CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209          162 ETTGPEIWEGTRG----QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES  213 (221)
Q Consensus       162 ~t~~~Ei~~q~~~----~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s  213 (221)
                      ++++.||.+|+..    .||+||+|+|+||+++|++.+|+. .|++|||||||.++
T Consensus       421 ~tig~Ei~~Q~~~~~g~~pD~vV~~vGgGg~~~Gi~~~f~~-~~~v~iigVE~~g~  475 (610)
T PRK13803        421 SVIGEEAKEQLKEQTGKLPDAIIACVGGGSNAIGIFYHFLD-DPSVKLIGVEAGGK  475 (610)
T ss_pred             hHHHHHHHHHHHHhhCCCCCEEEEEeCcCHhHHHHHHHHhh-CCCceEEEEecCCC
Confidence            9999999999842    599999999999999999999964 78999999999985

>COG0498 ThrC Threonine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=5.5e-35  Score=254.78  Aligned_cols=198  Identities=24%  Similarity=0.256  Sum_probs=179.7

Q ss_pred             HhhcccCCCceeecccccCCCCC---eEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKA---RIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~---~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      ......+.||+++.+++...++.   ++|+|.|.+|||||||||++..++..+.+.|.     .+|+++||||+|.|+|+
T Consensus        69 ~~~l~eg~tp~~~~~~~~~~l~~~~~~lyvk~~~~nPT~SFKDrg~~~~~~~~~~~g~-----~~I~~ASSGnTgAs~aa  143 (411)
T COG0498          69 AVSLGEGGTPLYKAPALAAPLGVLNDNLYVKELGHNPTGSFKDRGMTVLVSLAKELGA-----KTILCASSGNTGASAAA  143 (411)
T ss_pred             hhhhhhccCccccCcccchhhccCCcceehhhhccCCCcchhhhhHHHHHHHHHHhcC-----CEEEEeCCchHHHHHHH
Confidence            45778889999999888887773   59999999999999999999999999999883     45999999999999999


Q ss_pred             HHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           88 FAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++.+.|++|+|++|.+ ++..|+.++..+|++++.++++  ||+|++.+++++++. ++++....-||..++ |+.|+++
T Consensus       144 ya~rag~~v~Vl~P~g~vs~~k~~q~~~~ga~~i~v~G~--fDda~~~vk~~~~~~-~~~~~~nsiNp~rle-gq~t~~f  219 (411)
T COG0498         144 YAARAGLKVFVLYPKGKVSPGKLAQMLTLGAHVIAVDGN--FDDAQELVKEAANRE-GLLSAVNSINPYRLE-GQKTYAF  219 (411)
T ss_pred             HhccCCCeEEEEecCCCCCHHHHHHHHhcCCEEEEEcCc--HHHHHHHHHHHHhhC-CceeeccccCHHHhh-hhhhhHh
Confidence            9999999999999998 9999999999999999999997  999999999999976 567787788999997 9999999


Q ss_pred             HHHHhhC-CCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCC
Q 043209          167 EIWEGTR-GQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILN  217 (221)
Q Consensus       167 Ei~~q~~-~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~  217 (221)
                      ||++|+. ..||+|++|+|+||++.|++.+|++..|      .+++.+||+++..++.
T Consensus       220 e~~~ql~~~~p~~v~vPvGn~gni~a~~~g~~~~~~~g~i~~~p~~~~vqaeg~~p~~  277 (411)
T COG0498         220 EIAEQLGWKAPDHVVVPVGNGGNLLAIYKGFKEGLPIGKIDKAPNMNGVQAEGFSPGV  277 (411)
T ss_pred             HHHHHhCCCCCCeEEEeCCchHHHHHHHHHHHhcccccchhcCchhhhhhHhhccchh
Confidence            9999997 3799999999999999999999999764      3788999999977654

>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]

Probab=99.97  E-value=1.5e-29  Score=209.38  Aligned_cols=195  Identities=17%  Similarity=0.235  Sum_probs=160.0

Q ss_pred             hcccCC-CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           13 TELIGN-TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        13 ~~~~~~-TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      .++.|+ |||+..++|++.+|++||+||||+|+||+||...+...+..|++.|+    ++.|.+.+.|.||.|.|.+|++
T Consensus        50 ~~Y~GRptpLy~a~~Lt~~~gakiyLKREDL~HtGAHKiNN~lGQ~LLAkrMGK----~riIAETGAGQHGVAtAta~A~  125 (396)
T COG0133          50 KDYAGRPTPLYFAERLTEHLGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----TRIIAETGAGQHGVATATAAAL  125 (396)
T ss_pred             HHhCCCCChhHHHHHHHHhhCceEEEehhhhcccchhhHHHHHHHHHHHHHhCC----ceEEeecCCCcccHHHHHHHHH
Confidence            345554 99999999999999999999999999999999999999999999997    6777788889999999999999


Q ss_pred             cCCeEEEEecC-CC--CHHHHHHHHHcCCEEEEeC-CCCChhHHHHHH-HHHHhhCCCeeecCCC---CC--CccHHHHH
Q 043209           92 KGYKLILVMPA-FM--SLEKRIILQAYGAQLILTN-AEMGIDEEFRIV-EELLNKIPTSFNPHQF---KN--PANPKTHY  161 (221)
Q Consensus        92 ~g~~~~ivvp~-~~--~~~~~~~l~~~Ga~V~~v~-~~~~~~~~~~~a-~~~~~~~~~~~~~~~~---~n--~~~~~~g~  161 (221)
                      +|++|+|||-. ++  ...++..|+.+||+|+.|. ++.+..|+.+.| +.+.......+|+-..   -+  |....--+
T Consensus       126 fgl~C~iYMGa~Dv~RQ~~NVfRM~LlGA~V~pV~sGs~TLKDA~neAlRdWvtn~~~ThY~iGsa~GPHPyP~iVRdFQ  205 (396)
T COG0133         126 FGLECVIYMGAEDVERQALNVFRMRLLGAEVVPVTSGSGTLKDAINEALRDWVTNVEDTHYLIGSAAGPHPYPTIVRDFQ  205 (396)
T ss_pred             hCCceEEEecchhhhhcccchhhhhhcCceEEEeccCCchHHHHHHHHHHHHHhccccceEEEeeccCCCCchHHHHHHH
Confidence            99999999965 33  4456788999999999986 445677888777 4455555556665332   12  33344467


Q ss_pred             hhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209          162 ETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE  212 (221)
Q Consensus       162 ~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~  212 (221)
                      +.++.|.-+|+    +.-||+||.|+|+|+++.|++..|.. .+++++||||+.|
T Consensus       206 ~vIG~E~k~Qile~egrlPD~vvACVGGGSNAiG~F~~Fi~-d~~V~LiGvEaaG  259 (396)
T COG0133         206 SVIGEEAKAQILEKEGRLPDAVVACVGGGSNAIGIFHPFID-DESVRLIGVEAAG  259 (396)
T ss_pred             HHHhHHHHHHHHHHhCCCCCeEEEeccCCcchhhhcccccC-CCCceEEEeccCc
Confidence            88999988876    34599999999999999999888875 4789999999987

>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]

Probab=99.96  E-value=1.3e-28  Score=203.15  Aligned_cols=201  Identities=20%  Similarity=0.223  Sum_probs=166.5

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC--ChHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEP--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTS--GNTGI   83 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~ass--GN~~~   83 (221)
                      -|+|+.....+||+.+++++++++|.+||+||||+.+  .|.+|.|..++++.+|+++|     .+++|+.++  +||.+
T Consensus         5 rf~R~~l~~~pTPiq~L~rls~~lg~eiYiKRDD~t~l~~gGNK~RKLefll~eal~~g-----~dTlvT~GgiQSNh~r   79 (323)
T COG2515           5 RFPRMELIFGPTPIQKLPRLSAHLGVEIYIKRDDLTGLAFGGNKIRKLEFLLGEALRKG-----ADTLVTYGGIQSNHVR   79 (323)
T ss_pred             cCCccccCCCCChhhhHHHHHHhcCeEEEEEcccccccccCccHHHHHHHHHhhhhhcC-----CcEEEEecccchhHHH
Confidence            4778888899999999999999999999999999965  68999999999999999998     567999988  99999


Q ss_pred             HHHHHHHHcCCeEEEEecCCC----CHHHHHHHHHcCCEEEEeCCCCCh--hHH-HHHHHHHHhhCCCeeecCCC-CCCc
Q 043209           84 GMACFAAAKGYKLILVMPAFM----SLEKRIILQAYGAQLILTNAEMGI--DEE-FRIVEELLNKIPTSFNPHQF-KNPA  155 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~----~~~~~~~l~~~Ga~V~~v~~~~~~--~~~-~~~a~~~~~~~~~~~~~~~~-~n~~  155 (221)
                      ++|++|+++|++|+.++....    ...++...+.+|+++..++...++  +.. ...++++.++....|.++.. .||.
T Consensus        80 ~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~~~g~kpyvIp~GG~~~~  159 (323)
T COG2515          80 QTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVRKQGGKPYVIPEGGSSPL  159 (323)
T ss_pred             HHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHHHhcCCCCcEeccCCcCcc
Confidence            999999999999999996643    234666778899999999987555  322 33344444443234444444 4665


Q ss_pred             cHHHHHhhHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCc
Q 043209          156 NPKTHYETTGPEIWEGTR--GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA  214 (221)
Q Consensus       156 ~~~~g~~t~~~Ei~~q~~--~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~  214 (221)
                      .-. ||...+.||.+|..  -++|+|||++|||||.+|++.++...+|+++|||+.....+
T Consensus       160 g~l-Gyv~~a~Ei~~Q~~~~~~fD~vVva~gs~gT~AGl~~g~~~~~~~~~ViG~~v~~~~  219 (323)
T COG2515         160 GAL-GYVRLALEIAEQAEQLLKFDSVVVAPGSGGTHAGLLVGLAQLGPDVEVIGIDVSADP  219 (323)
T ss_pred             ccc-cHHHHHHHHHHHHhhccCCCEEEEeCCCcchHHHHHHHhhhccCCCceEEEeecCCH
Confidence            554 99999999999986  57999999999999999999999999999999999887754

>PRK09225 threonine synthase; Validated

Probab=99.93  E-value=7.8e-25  Score=194.84  Aligned_cols=177  Identities=16%  Similarity=0.114  Sum_probs=144.6

Q ss_pred             CCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHH---HHHHHHHcCCCCCCCeEEEeeCCChHHHHH-HHHHHHcC
Q 043209           18 NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFS---MIKDAEEKGLITPGKTVLIECTSGNTGIGM-ACFAAAKG   93 (221)
Q Consensus        18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~---~~~~a~~~g~~~~g~~~vv~assGN~~~al-A~~a~~~g   93 (221)
                      .+||.+++       .++|+.--.++||||||||++..   ++..+.+ +.    ...|+++||||+|.|+ +.++.+.|
T Consensus        88 ~~pl~~l~-------~~~~~lELfhGPT~sFKD~a~~~l~~~l~~a~~-~~----~~~Il~ATSGdtG~Aa~aaf~~~~g  155 (462)
T PRK09225         88 IAPLVQLD-------DNLYVLELFHGPTLAFKDFALQFLAQLLEYVLK-GE----KITILGATSGDTGSAAAEAFRGKPN  155 (462)
T ss_pred             ccceEEeC-------CCceeHhhccCCccchhhhHHHHHHHHHHHHHh-CC----CcEEEEcCCCcHHHHHHHHHhCcCC
Confidence            47887763       15888777788999999999988   7888877 42    5669999999999998 68888899


Q ss_pred             CeEEEEecCC-CCHHHHHHHHHc-CCEEEEeCCCCChhHHHHHHHHHHhhC-----CCeeecCCCCCCccHHHHHhhHHH
Q 043209           94 YKLILVMPAF-MSLEKRIILQAY-GAQLILTNAEMGIDEEFRIVEELLNKI-----PTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        94 ~~~~ivvp~~-~~~~~~~~l~~~-Ga~V~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++|+|++|+. ++..++++|..+ |++|+.+.-+++|++|++.++++.++.     -+++-.+. -|+..++ ++.++++
T Consensus       156 i~~~V~~P~g~vs~~q~~Qm~t~~g~nv~vi~V~G~fDD~q~~vk~~~~d~~~~~~~~l~saNS-iN~~Ri~-gQ~~yyf  233 (462)
T PRK09225        156 VRVVILYPKGKVSPVQEKQMTTLQGDNIHVVAVEGNFDDCQALVKAAFNDEELKEKLKLSSANS-INIGRLL-AQIVYYF  233 (462)
T ss_pred             CEEEEEEcCCCCCHHHHHHHHhhcCCCeEEEEeCCCHHHHHHHHHHHhhchhhhhcCceEEEec-cCHHHHH-HHHHHHH
Confidence            9999999996 899999999999 998844433335999999999987662     13444444 4888887 9999999


Q ss_pred             HHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEe
Q 043209          167 EIWEGTRG---QVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVE  209 (221)
Q Consensus       167 Ei~~q~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe  209 (221)
                      |+++|+.+   .+|.|+||+|+||.+.|.+.+ ++++ |-.|+|+++
T Consensus       234 ea~~ql~~~~~~p~~~vVPtGnfgni~a~~~A-k~mGlpi~kli~A~  279 (462)
T PRK09225        234 YAYLQLGIEAGEKVNFSVPSGNFGNILAGYYA-KKMGLPIKRLIVAT  279 (462)
T ss_pred             HHHHHhccccCCCCEEEEECCcHHHHHHHHHH-HHcCCCcceEEEEe
Confidence            99999964   389999999999999999998 4444 767999998

>cd01560 Thr-synth_2 Threonine synthase catalyzes the final step of threonine biosynthesis

Probab=99.93  E-value=3.4e-24  Score=190.79  Aligned_cols=181  Identities=14%  Similarity=0.090  Sum_probs=147.4

Q ss_pred             CCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHH---HHHHHHcCCCCCCCeEEEeeCCChHHHH-HHHHHHHcC
Q 043209           18 NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSM---IKDAEEKGLITPGKTVLIECTSGNTGIG-MACFAAAKG   93 (221)
Q Consensus        18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~---~~~a~~~g~~~~g~~~vv~assGN~~~a-lA~~a~~~g   93 (221)
                      -+||.++.       .++|++...++||||||||++..+   +..+.++.   .+...|+++||||+|.| ++.++...|
T Consensus        87 ~~pl~~l~-------~~~~~lELfhGPT~sFKD~a~~~l~~l~~~~~~~~---~~~~~Il~ATSGdTG~Aa~aaf~~~~g  156 (460)
T cd01560          87 IAPLVQLG-------DNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRR---NERITILVATSGDTGSAAIEGFRGKPN  156 (460)
T ss_pred             ccceEEeC-------CCcEEeeeeeCCCcchHHhHHHHHHHHHHHHHHhc---CCCeEEEEcCCCcHHHHHHHHHhCcCC
Confidence            37777754       268999999999999999999876   66666541   12567999999999999 488888899


Q ss_pred             CeEEEEecCC-CCHHHHHHHHHcCC---EEEEeCCCCChhHHHHHHHHHHhhC-----CCeeecCCCCCCccHHHHHhhH
Q 043209           94 YKLILVMPAF-MSLEKRIILQAYGA---QLILTNAEMGIDEEFRIVEELLNKI-----PTSFNPHQFKNPANPKTHYETT  164 (221)
Q Consensus        94 ~~~~ivvp~~-~~~~~~~~l~~~Ga---~V~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~  164 (221)
                      ++|+|++|.. ++..+..+|..+|+   +++.|+++  |++|++.++++.++.     -+++-.+. -|+..++ ++.+.
T Consensus       157 i~v~Vl~P~g~vs~~Q~~Qm~t~g~~Nv~vi~V~G~--fDd~q~~vk~~~~d~~~~~~~~l~saNS-iN~~Ri~-~Q~~y  232 (460)
T cd01560         157 VDVVVLYPKGGVSPIQELQMTTLPADNVHVVAVEGD--FDDCQSLVKALFADEDFNKKLKLSSANS-INWARIL-AQIVY  232 (460)
T ss_pred             CEEEEEEcCCCCCHHHHHHHHhhCCCceEEEEEcCC--HHHHHHHHHHHhcChhhHhcceEEEEec-cCHHHHH-HHHHH
Confidence            9999999996 89999999999996   77788775  999999999887652     13333443 4788886 99999


Q ss_pred             HHHHHHhhCC----CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209          165 GPEIWEGTRG----QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE  212 (221)
Q Consensus       165 ~~Ei~~q~~~----~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~  212 (221)
                      ++|+++|+..    .+|.|+||+|+||.+.|.+.+.+.-.|-.|+|+++.++
T Consensus       233 yf~a~~ql~~~~~~~p~~~vVPtGnfgni~a~~~Ak~mGlpi~kli~a~n~n  284 (460)
T cd01560         233 YFYAYLQLLKRGEGEKVEFSVPTGNFGNILAGYYAKKMGLPIKKLIVATNEN  284 (460)
T ss_pred             HHHHHHHhccccCCCCCEEEEECCcHHHHHHHHHHHHcCCCCccEEEEeCCC
Confidence            9999999963    58999999999999999999966544777999976544

The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.

>COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) [General function prediction only]

Probab=99.93  E-value=7.5e-25  Score=182.00  Aligned_cols=201  Identities=22%  Similarity=0.252  Sum_probs=155.1

Q ss_pred             hccc-CCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           13 TELI-GNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        13 ~~~~-~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      +..+ .+|||++..+|.+.++  ++||.|.|+..||||||...|....-.+...|.    ++.+.+.+.|.+|.|++.+|
T Consensus        72 Y~~~gRPTPL~RA~~LE~~L~tparIYyK~Eg~tptGSHKiNTAlAqaYyak~eg~----~rl~TETGAGQWGsAlslA~  147 (432)
T COG1350          72 YLQIGRPTPLIRAKNLEEALGTPARIYYKYEGVTPTGSHKINTALAQAYYAKKEGA----KRLTTETGAGQWGSALSLAA  147 (432)
T ss_pred             HHHhCCCCchhhhhhHHHHhCCCcEEEEEecccCCCCCCCcchHHHHHHHHHhcCc----eeeecccCCchHHHHHHHHH
Confidence            3344 6899999999998877  799999999999999999999999999999985    55445556699999999999


Q ss_pred             HHcCCeEEEEecCC---CCHHHHHHHHHcCCEEEEeCCCCC----------------hhHHHHHHHHHHhhCCCeeec-C
Q 043209           90 AAKGYKLILVMPAF---MSLEKRIILQAYGAQLILTNAEMG----------------IDEEFRIVEELLNKIPTSFNP-H  149 (221)
Q Consensus        90 ~~~g~~~~ivvp~~---~~~~~~~~l~~~Ga~V~~v~~~~~----------------~~~~~~~a~~~~~~~~~~~~~-~  149 (221)
                      +.+|++|+|||-..   ..+.+.-.|+.|||+|+..+.+.+                .--++..|-+.+-++++..|. .
T Consensus       148 alf~lk~~V~Mvr~Sy~qKpyRk~lM~~yGa~V~pSPS~~Te~Grk~l~e~p~hPGSLGIAISEAiE~al~~~~~kY~lG  227 (432)
T COG1350         148 ALFGLKATVFMVRVSYYQKPYRKYLMELYGAEVVPSPSELTEFGRKILKEDPDHPGSLGIAISEAIEYALKNENTKYSLG  227 (432)
T ss_pred             HHhCceeEEEEEehhhhcchHHHHHHHHhCCeecCCCcchhHHHHHHHhcCCCCCchhHHHHHHHHHHHHhCCCceecch
Confidence            99999999999653   345677889999999998765311                111455555555555433343 2


Q ss_pred             CCCCCccHHHHHhhHHHHHHHhh---CCCCCEEEEccCchhHHHHHHHHHHhc---C-CCcEEEEEeCCCCccCCCC
Q 043209          150 QFKNPANPKTHYETTGPEIWEGT---RGQVDIFVSGIGTGGTVSGVGNFLKKK---N-PEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       150 ~~~n~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~p~G~Gg~~~Gi~~~~~~~---~-~~~kvigVe~~~s~~~~~~  219 (221)
                      .--|.  ...|+..+|.|..+|+   +..||++|-|+|+|++++|+..-|-..   + ...++|+|||..+|.|.-|
T Consensus       228 SVlnh--vllhQTViGlEakkQle~~~e~PDv~igcvGGGSNfag~~yPfi~d~l~g~~~~~fiAvep~a~P~lT~G  302 (432)
T COG1350         228 SVLNH--VLLHQTVIGLEAKKQLEQAGEDPDVIIGCVGGGSNFAGLTYPFIGDKLRGKKETRFIAVEPKACPKLTKG  302 (432)
T ss_pred             hHHHH--HHHHHHHHhHHHHHHHHhcCCCCCEEEEeccCCCccccccchhhhhhhcCCceeEEEEeCCccCCccccc
Confidence            22232  2248899999996665   567999999999999999997776442   2 2389999999999999866

>KOG1395 consensus Tryptophan synthase beta chain [Amino acid transport and metabolism]

Probab=99.92  E-value=4.8e-25  Score=184.57  Aligned_cols=204  Identities=20%  Similarity=0.193  Sum_probs=149.7

Q ss_pred             ccchhHHhhccc-CCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChH
Q 043209            5 KCAIANDITELI-GNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNT   81 (221)
Q Consensus         5 ~~~~~~~~~~~~-~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~   81 (221)
                      ++.-+..++.++ .+|||++.++|.+.++  .+||+|+|++||+||+|...+......+.+.|+    +..|.+.+.|.|
T Consensus       108 f~ee~~eiy~y~gRpspL~~AkRLte~~q~ga~IylKrEdlnh~GsHKiNnav~QallakrlGk----knviaETGAGQh  183 (477)
T KOG1395|consen  108 FWEEFLEIYKYLGRPSPLIRAKRLTEHCQTGARIYLKREDLNHTGSHKINNAVAQALLAKRLGK----KNVIAETGAGQH  183 (477)
T ss_pred             HHHHHHHHHHHcCCCchhHHHHHHHHHhCCCCEEEEEecCCCccccCCcccHHHHHHHHHHhcc----cceeeccCCCcc
Confidence            344455566444 4599999999988764  799999999999999999999999999999997    676777788999


Q ss_pred             HHHHHHHHHHcCCeEEEEecCC---CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHH-hhCCCeeecCCC-C--C
Q 043209           82 GIGMACFAAAKGYKLILVMPAF---MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELL-NKIPTSFNPHQF-K--N  153 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~---~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~-~~~~~~~~~~~~-~--n  153 (221)
                      |.|+|.+|+++|++|+|+|-..   ....++..|+.+||+|+.+... ...+++-..+.++- ....-.+|+-.. .  +
T Consensus       184 GvatA~a~a~FGl~C~v~mgAed~~rqalnvfrmrllGAkV~pv~sGt~tLrda~sea~r~wvt~~ett~y~~gs~~gph  263 (477)
T KOG1395|consen  184 GVATATACAKFGLDCTVYMGAEDYRRQALNVFRMRLLGAKVHPVTSGTRTLRDATSEAGRLWVTNSETTHYAAGSAIGPH  263 (477)
T ss_pred             chHHHHHHHHhCCceEEEechhHHHHHHHHHHHHHHhCceEeecCCCceehhcccchhhhhhhhhhheeeeeecccCCCC
Confidence            9999999999999999999553   3556788899999999998642 23344433332221 111123333222 1  1


Q ss_pred             Cc--cHHHHHhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209          154 PA--NPKTHYETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES  213 (221)
Q Consensus       154 ~~--~~~~g~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s  213 (221)
                      |+  ....-+.+++.|-..|.    +..||.||.|+|+|++.+|++.-|.. ...+++||||..+-
T Consensus       264 p~pt~vr~fhsvIg~Et~~Q~me~~g~~PD~vvaCvGGGSN~~Glf~pF~~-dk~v~~igveaagd  328 (477)
T KOG1395|consen  264 PYPTVVRTFHSVIGKETKIQQMEKFGKLPDAVVACVGGGSNSAGLFSPFIR-DKSVGMIGVEAAGD  328 (477)
T ss_pred             CcHHHHHHHHHHHhHHHHHHHHHHhCCCCCeEEEeccCCCccccccchhhc-cchhheeeeeeccc
Confidence            11  12123467777766554    34699999999999999999988875 45688999987763

>COG3048 DsdA D-serine dehydratase [Amino acid transport and metabolism]

Probab=99.82  E-value=1.9e-19  Score=148.81  Aligned_cols=204  Identities=21%  Similarity=0.209  Sum_probs=167.2

Q ss_pred             hcccCCCceeeccccc----CCC----CCeEEEEeCCCCC-CCchhhHHHHHHH-HH----HHHcCCCCCC---------
Q 043209           13 TELIGNTPMVYLNNIV----DGC----KARIAAKLEMMEP-CSSVKDRIAFSMI-KD----AEEKGLITPG---------   69 (221)
Q Consensus        13 ~~~~~~TPl~~~~~l~----~~~----g~~i~~K~E~~~p-tGs~K~R~a~~~~-~~----a~~~g~~~~g---------   69 (221)
                      +.++-.+||+..+.+.    +++    ..++|+|.|+..| +||.|.|+.-|-+ .+    |++.|.+...         
T Consensus        73 ~~GiIES~lv~i~~mq~~Le~~Y~~~i~G~llLK~DshLpIsGSIKARGGIYEVL~hAE~LAle~Gll~~~DDYs~L~~~  152 (443)
T COG3048          73 TGGIIESPLVEIPAMQKRLEKEYQQPIPGRLLLKKDSHLPISGSIKARGGIYEVLKHAEKLALEAGLLTLEDDYSILLSE  152 (443)
T ss_pred             cCCeeccchhhhHHHHHHHHHHhcCCCCcceeeeccCCCCcccceeccccHHHHHHHHHHHHHhcCcccccchHHHhhcH
Confidence            3455668888765443    222    3589999999999 8999999765554 33    4566654332         


Q ss_pred             -------CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209           70 -------KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        70 -------~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~  142 (221)
                             +..|...|+||.|.++....+.+|+++++-|..++.++|.+.++..|.+|+....+  |..+.+.-++-++..
T Consensus       153 ~f~~FFs~ysIaVGSTGNLGlSIGI~sA~lGF~vtVHMSADAr~WKKd~LRs~gV~ViEYe~D--Y~~AVeeGRk~a~~D  230 (443)
T COG3048         153 EFKDFFSRYSIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARAWKKDKLRSHGVTVVEYEQD--YGVAVEEGRKEAESD  230 (443)
T ss_pred             HHHHHHHhheEeecccCccceehhhhhhhhcceEEEEecchHHHHHHHHHHhcCceEEEecch--hhHHHHHhhhhhccC
Confidence                   12688899999999999999999999999999999999999999999999999875  888999998888888


Q ss_pred             CCeeecCCCCCCccHHHHHhhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCC
Q 043209          143 PTSFNPHQFKNPANPKTHYETTGPEIWEGTRG--------QVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAES  213 (221)
Q Consensus       143 ~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s  213 (221)
                      |..||++.-++-.... ||...+..+-.|+..        .|-.|..|+|-||.-.|++.++|... .++.++-+||..|
T Consensus       231 P~c~FiDDE~S~~LFL-GYaVAa~Rlk~Q~d~~gi~vd~ehPLfVylPCGVGGgPGGVafGLKl~fgd~VhcfFaEPths  309 (443)
T COG3048         231 PNCFFIDDENSRTLFL-GYAVAAQRLKKQFDEQGIVVDAEHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHS  309 (443)
T ss_pred             CceEEecccchhhhhh-hHHHHHHHHHHHHHhcCceecCCCceEEEeecCCCCCcchhhhhhHhhhcCceEEEEecCCCC
Confidence            8899998765555554 999999999999842        36689999999999999999999876 6799999999999


Q ss_pred             ccCCCC
Q 043209          214 AILNGG  219 (221)
Q Consensus       214 ~~~~~~  219 (221)
                      |+|.=|
T Consensus       310 PcMlLG  315 (443)
T COG3048         310 PCMLLG  315 (443)
T ss_pred             hHHHHh
Confidence            998643

>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli

Probab=93.43  E-value=0.67  Score=36.19  Aligned_cols=101  Identities=15%  Similarity=0.062  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHcCCeEE-EEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHH
Q 043209           82 GIGMACFAAAKGYKLI-LVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTH  160 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~-ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  160 (221)
                      |..+..+++.+|.++- -+-+.+.-..-++.+...+-.|.+++.+  .+...+.++.+.+++|+.-....++-+.... -
T Consensus        13 G~~i~~~~~~~g~~~~~rv~g~dl~~~l~~~~~~~~~~ifllG~~--~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~-~   89 (172)
T PF03808_consen   13 GMPIVWAARLLGRPLPERVTGSDLFPDLLRRAEQRGKRIFLLGGS--EEVLEKAAANLRRRYPGLRIVGYHHGYFDEE-E   89 (172)
T ss_pred             CHHHHHHHHHcCCCCCcccCHHHHHHHHHHHHHHcCCeEEEEeCC--HHHHHHHHHHHHHHCCCeEEEEecCCCCChh-h
Confidence            4688899999988773 2222233344566677788899999886  3445556667777777644332222222221 2


Q ss_pred             HhhHHHHHHHhhCCCCCEEEEccCchhH
Q 043209          161 YETTGPEIWEGTRGQVDIFVSGIGTGGT  188 (221)
Q Consensus       161 ~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~  188 (221)
                      ...+..+|.+   ..+|.|+++.|+---
T Consensus        90 ~~~i~~~I~~---~~pdiv~vglG~PkQ  114 (172)
T PF03808_consen   90 EEAIINRINA---SGPDIVFVGLGAPKQ  114 (172)
T ss_pred             HHHHHHHHHH---cCCCEEEEECCCCHH
Confidence            3344444433   358999999998653

Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=92.62  E-value=5.1  Score=35.64  Aligned_cols=58  Identities=21%  Similarity=0.221  Sum_probs=39.1

Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHcCCCCC-CCeEEEeeCCChHHHH--HHHHHHHcCCeEEEEe
Q 043209           40 EMMEPCSSVKDRIAFSMIKDAEEKGLITP-GKTVLIECTSGNTGIG--MACFAAAKGYKLILVM  100 (221)
Q Consensus        40 E~~~ptGs~K~R~a~~~~~~a~~~g~~~~-g~~~vv~assGN~~~a--lA~~a~~~g~~~~ivv  100 (221)
                      -+.+|.|+.+  .....+...+++|.+.. ++..+|+..++..|.|  +|.+. ..|.+.+++.
T Consensus        13 ~~~hp~gc~~--~v~~qi~~~~~~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~   73 (398)
T PRK13656         13 TTAHPVGCEA--NVKEQIEYVKAQGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVF   73 (398)
T ss_pred             CCCCCHHHHH--HHHHHHHHHHhcCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEe
Confidence            4567888843  46677788888887744 4666777777767777  45555 5677766654

>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins

Probab=91.42  E-value=2.1  Score=33.32  Aligned_cols=121  Identities=19%  Similarity=0.093  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHH
Q 043209           82 GIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTH  160 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  160 (221)
                      |..+.++++.++.+..--++.. .-..-++.+...+..|.+++..  -+...+.++.+.++.|+.-.....+-+...+ .
T Consensus        11 G~~l~~~~~~~~~~~~~r~~g~dl~~~ll~~~~~~~~~v~llG~~--~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~-~   87 (171)
T cd06533          11 GIGVVWAARLLGGPLPERVTGSDLMPALLELAAQKGLRVFLLGAK--PEVLEKAAERLRARYPGLKIVGYHHGYFGPE-E   87 (171)
T ss_pred             cHHHHHHHHHcCCCCCcccCcHHHHHHHHHHHHHcCCeEEEECCC--HHHHHHHHHHHHHHCCCcEEEEecCCCCChh-h
Confidence            4678889999988733233321 2233455566678999999876  2344445566777777654332222222222 1


Q ss_pred             HhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEe
Q 043209          161 YETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVE  209 (221)
Q Consensus       161 ~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe  209 (221)
                      ...+..+|.+   ..||.|+++.|+---= -.....+...+..-+++|-
T Consensus        88 ~~~i~~~I~~---~~pdiv~vglG~PkQE-~~~~~~~~~l~~~v~~~vG  132 (171)
T cd06533          88 EEEIIERINA---SGADILFVGLGAPKQE-LWIARHKDRLPVPVAIGVG  132 (171)
T ss_pred             HHHHHHHHHH---cCCCEEEEECCCCHHH-HHHHHHHHHCCCCEEEEec
Confidence            1223333322   3599999999986532 2233334434444455543

E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.

>PRK12743 oxidoreductase; Provisional

Probab=90.86  E-value=3.4  Score=33.77  Aligned_cols=54  Identities=11%  Similarity=0.193  Sum_probs=37.4

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|.-|.+++......|.+++++...+..  ....+.++..|.++..+.
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   58 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQ   58 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEE
Confidence            456888888999999999998899987766543322  222345666777666543

>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length

Probab=90.77  E-value=5.8  Score=32.22  Aligned_cols=56  Identities=27%  Similarity=0.355  Sum_probs=36.6

Q ss_pred             HHHHcCCCCCCCeEEEee-CCC---hHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCC
Q 043209           59 DAEEKGLITPGKTVLIEC-TSG---NTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGA  117 (221)
Q Consensus        59 ~a~~~g~~~~g~~~vv~a-ssG---N~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga  117 (221)
                      .|...|-   ..+.+|++ |.|   .+..+||.+|++.|=+.++++|+..+ ..-.+.|..+|.
T Consensus        34 SAlAAG~---nAkliVe~~s~g~~~~ttiaLaaAAr~TgGR~vCIvp~~~~~~~~~~~l~~~~~   94 (218)
T PF07279_consen   34 SALAAGW---NAKLIVEAWSSGGAISTTIALAAAARQTGGRHVCIVPDEQSLSEYKKALGEAGL   94 (218)
T ss_pred             HHHhccc---cceEEEEEecCCCchHhHHHHHHHHHhcCCeEEEEcCChhhHHHHHHHHhhccc
Confidence            3445553   13345555 444   46899999999999999999999654 344455555553

The function of this family is unknown.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=90.18  E-value=3.7  Score=35.44  Aligned_cols=57  Identities=28%  Similarity=0.434  Sum_probs=44.5

Q ss_pred             cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      ...+.+|++.+|.+.+|.-|....-.|+.+|. +++++-  .+..+.+.++.+||+.+..
T Consensus       137 ~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~--~s~~k~~~~~~lGAd~vi~  193 (326)
T COG0604         137 RAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVV--SSSEKLELLKELGADHVIN  193 (326)
T ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEe--cCHHHHHHHHhcCCCEEEc
Confidence            45577788888999999999999999999998 444442  2456666999999977765

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=90.13  E-value=8.3  Score=31.00  Aligned_cols=51  Identities=22%  Similarity=0.326  Sum_probs=41.5

Q ss_pred             EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +|...+|+.|..++.+....+.++++++.+. +....+.++..|++++..+-
T Consensus         2 ~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~-~~~~~~~l~~~g~~vv~~d~   52 (233)
T PF05368_consen    2 LVTGATGNQGRSVVRALLSAGFSVRALVRDP-SSDRAQQLQALGAEVVEADY   52 (233)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTGCEEEEESSS-HHHHHHHHHHTTTEEEES-T
T ss_pred             EEECCccHHHHHHHHHHHhCCCCcEEEEecc-chhhhhhhhcccceEeeccc
Confidence            5778889999999999988999999998664 55667778889999886543

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=89.99  E-value=4.8  Score=29.03  Aligned_cols=40  Identities=28%  Similarity=0.272  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           82 GIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      |......|+.+|.+.+++.   .+..+++.++.+|++.+....
T Consensus         3 G~~a~q~ak~~G~~vi~~~---~~~~k~~~~~~~Ga~~~~~~~   42 (130)
T PF00107_consen    3 GLMAIQLAKAMGAKVIATD---RSEEKLELAKELGADHVIDYS   42 (130)
T ss_dssp             HHHHHHHHHHTTSEEEEEE---SSHHHHHHHHHTTESEEEETT
T ss_pred             HHHHHHHHHHcCCEEEEEE---CCHHHHHHHHhhccccccccc
Confidence            4556666777773333333   246677777777766665544

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=89.46  E-value=4.3  Score=34.64  Aligned_cols=88  Identities=25%  Similarity=0.286  Sum_probs=62.6

Q ss_pred             eEEEEeCCCCC-----CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-H
Q 043209           34 RIAAKLEMMEP-----CSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSL-E  107 (221)
Q Consensus        34 ~i~~K~E~~~p-----tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~-~  107 (221)
                      +-++|.++.-|     |-+.---.|+-|+.+..+..   +|...|=-++.+--|.++--.|+.+|++.+-++.+.... +
T Consensus       124 ~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~---~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~iee  200 (354)
T KOG0025|consen  124 SDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLN---KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEE  200 (354)
T ss_pred             cceEEcCCcCChhhhheeccCchHHHHHHHHHHhcC---CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHH
Confidence            46677777554     44555557888888877543   455433334446678888889999999999999775544 4


Q ss_pred             HHHHHHHcCCEEEEeCC
Q 043209          108 KRIILQAYGAQLILTNA  124 (221)
Q Consensus       108 ~~~~l~~~Ga~V~~v~~  124 (221)
                      ..++|+.+||+-++.+.
T Consensus       201 l~~~Lk~lGA~~ViTee  217 (354)
T KOG0025|consen  201 LKKQLKSLGATEVITEE  217 (354)
T ss_pred             HHHHHHHcCCceEecHH
Confidence            56789999999988764

>cd08230 glucose_DH Glucose dehydrogenase

Probab=89.25  E-value=3.6  Score=35.52  Aligned_cols=54  Identities=17%  Similarity=0.209  Sum_probs=41.4

Q ss_pred             CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209           66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI  120 (221)
Q Consensus        66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~  120 (221)
                      +.++.+.+|. +.|..|...+..++.+|.+++++.+...+..+++.++.+|++.+
T Consensus       170 ~~~g~~vlI~-G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v  223 (355)
T cd08230         170 TWNPRRALVL-GAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV  223 (355)
T ss_pred             cCCCCEEEEE-CCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe
Confidence            3456664555 57999999999999999976665554457888899999999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]

Probab=89.10  E-value=11  Score=30.59  Aligned_cols=132  Identities=14%  Similarity=0.061  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHH
Q 043209           52 IAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE  131 (221)
Q Consensus        52 ~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~  131 (221)
                      -+.-+.....+.|.    ...=|+.++-....++...++.+. ++.|=.-.-.+..+.++....||+.+..++-  -.+.
T Consensus        26 ~a~~~a~Ali~gGi----~~IEITl~sp~a~e~I~~l~~~~p-~~lIGAGTVL~~~q~~~a~~aGa~fiVsP~~--~~ev   98 (211)
T COG0800          26 EALPLAKALIEGGI----PAIEITLRTPAALEAIRALAKEFP-EALIGAGTVLNPEQARQAIAAGAQFIVSPGL--NPEV   98 (211)
T ss_pred             HHHHHHHHHHHcCC----CeEEEecCCCCHHHHHHHHHHhCc-ccEEccccccCHHHHHHHHHcCCCEEECCCC--CHHH
Confidence            34555555666664    333456677778888899999888 6665555556889999999999999988764  1222


Q ss_pred             HHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhC---------------CCCCEEEEccCchhHHHHHHHHH
Q 043209          132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTR---------------GQVDIFVSGIGTGGTVSGVGNFL  196 (221)
Q Consensus       132 ~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~---------------~~~d~vv~p~G~Gg~~~Gi~~~~  196 (221)
                      .    +.+.++ +..+++...+|--+... -..|.++++-++               +-++.-|+|+|+=+. .=+..|+
T Consensus        99 ~----~~a~~~-~ip~~PG~~TptEi~~A-le~G~~~lK~FPa~~~Gg~~~~ka~~gP~~~v~~~pTGGVs~-~N~~~yl  171 (211)
T COG0800          99 A----KAANRY-GIPYIPGVATPTEIMAA-LELGASALKFFPAEVVGGPAMLKALAGPFPQVRFCPTGGVSL-DNAADYL  171 (211)
T ss_pred             H----HHHHhC-CCcccCCCCCHHHHHHH-HHcChhheeecCccccCcHHHHHHHcCCCCCCeEeecCCCCH-HHHHHHH
Confidence            3    344444 67788777666544322 234444433321               236788888886443 3444444


Q ss_pred             H
Q 043209          197 K  197 (221)
Q Consensus       197 ~  197 (221)
                      +
T Consensus       172 a  172 (211)
T COG0800         172 A  172 (211)
T ss_pred             h
Confidence            3

>PRK08226 short chain dehydrogenase; Provisional

Probab=88.93  E-value=7  Score=31.88  Aligned_cols=54  Identities=26%  Similarity=0.129  Sum_probs=35.4

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|..|.+++......|.+++++-.........+.+...|.++..+.
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~   60 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVV   60 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEE
Confidence            566888889999999999988889986666433211222334444566655443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=88.90  E-value=8.4  Score=31.39  Aligned_cols=73  Identities=23%  Similarity=0.260  Sum_probs=46.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      ++..+|+.+++.-|.++|......|.+++++-... .....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus         8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE-APETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            36778999999999999999999999887764322 223344556677776554322 12344444444444443

>PRK08862 short chain dehydrogenase; Provisional

Probab=88.88  E-value=7  Score=31.57  Aligned_cols=72  Identities=14%  Similarity=0.149  Sum_probs=43.7

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK  141 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~  141 (221)
                      +..+|+..++.-|.+++......|.+++++-.+... ....+.++..|.+++.+.-+ .+.++..+...+..++
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            566888888889999999999999986665433211 12234455667766544321 1334444455555544

>PRK06139 short chain dehydrogenase; Provisional

Probab=88.52  E-value=5.7  Score=34.22  Aligned_cols=71  Identities=18%  Similarity=0.175  Sum_probs=44.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHh
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLN  140 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~  140 (221)
                      ++.+|+..+|-.|.+++......|.+++++..... .....+.++..|+++..+..+ .+.++..+.+.+..+
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            56788888899999999999999998766654321 122234566778877654322 123333444444433

>PRK08628 short chain dehydrogenase; Provisional

Probab=88.39  E-value=9.3  Score=31.01  Aligned_cols=55  Identities=15%  Similarity=0.091  Sum_probs=38.2

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +..+|+..+|-.|.++|..-...|.+++++..........+.++..|.++..+..
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~   62 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQV   62 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEc
Confidence            5668888889999999999888999887765433222334555666766655443

>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family

Probab=88.11  E-value=5.3  Score=31.40  Aligned_cols=98  Identities=15%  Similarity=0.089  Sum_probs=54.3

Q ss_pred             HHHHHHHHHcCCeEEEEecC-CCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209           83 IGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHY  161 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~-~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  161 (221)
                      ..+.++++.+|.+..--++. +.-..-.+.....|..|.+++..  -+...+.++.+.++.|+.-... ++.+...+ -.
T Consensus        14 ~~iv~~~r~~g~~~~~Rv~G~dl~~~l~~~~~~~~~~vfllG~~--~~v~~~~~~~l~~~yP~l~i~g-~~g~f~~~-~~   89 (177)
T TIGR00696        14 IGVVWGLKLLGYPQQSRVAGPDLMEELCQRAGKEKLPIFLYGGK--PDVLQQLKVKLIKEYPKLKIVG-AFGPLEPE-ER   89 (177)
T ss_pred             HHHHHHHHHcCCCCCCccChHHHHHHHHHHHHHcCCeEEEECCC--HHHHHHHHHHHHHHCCCCEEEE-ECCCCChH-HH
Confidence            66788899888654322222 11223344556778899999875  3344555666777777643222 11122221 11


Q ss_pred             hhHHHHHHHhhCCCCCEEEEccCchh
Q 043209          162 ETTGPEIWEGTRGQVDIFVSGIGTGG  187 (221)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg  187 (221)
                      ..+..+|.+   ..+|.|+|+.|+=-
T Consensus        90 ~~i~~~I~~---s~~dil~VglG~Pk  112 (177)
T TIGR00696        90 KAALAKIAR---SGAGIVFVGLGCPK  112 (177)
T ss_pred             HHHHHHHHH---cCCCEEEEEcCCcH
Confidence            223333333   25899999999743

The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.

>TIGR01064 pyruv_kin pyruvate kinase

Probab=87.92  E-value=17  Score=33.18  Aligned_cols=122  Identities=13%  Similarity=0.127  Sum_probs=74.1

Q ss_pred             HHHHHHHHcCCeEEEEe-----------cCCCCHHHHHHHHHcCCEEEEeCCCC----ChhHHHHHHHHHHhhCCCee--
Q 043209           84 GMACFAAAKGYKLILVM-----------PAFMSLEKRIILQAYGAQLILTNAEM----GIDEEFRIVEELLNKIPTSF--  146 (221)
Q Consensus        84 alA~~a~~~g~~~~ivv-----------p~~~~~~~~~~l~~~Ga~V~~v~~~~----~~~~~~~~a~~~~~~~~~~~--  146 (221)
                      .+..+|+..|.++++..           |..+....+......|++.+..+.+.    ...++.+...+.+++-...+  
T Consensus       261 ~ii~aaraag~pvi~atqmLeSM~~~p~PTRAe~~dv~~~v~~G~d~v~ls~eta~G~yP~~~v~~m~~I~~~~E~~~~~  340 (473)
T TIGR01064       261 KMIRKCNRAGKPVITATQMLDSMIKNPRPTRAEVSDVANAILDGTDAVMLSGETAKGKYPVEAVKMMAKIAKEAEKALAY  340 (473)
T ss_pred             HHHHHHHHcCCCEEEEChhhhhhhcCCCCCcccHHHHHHHHHcCCCEEEEcchhhcCCCHHHHHHHHHHHHHHHHhccch
Confidence            34567888899987754           33445667777788999998886542    12345444444433221111  


Q ss_pred             ---ecCCCC-C---CccHHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209          147 ---NPHQFK-N---PANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE  212 (221)
Q Consensus       147 ---~~~~~~-n---~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~  212 (221)
                         |-.+.. .   ....+ .....+.++.+.+  +.++||+.+-||.++--+++    ..|.+.|+++.|..
T Consensus       341 ~~~~~~~~~~~~~~~~~~~-~ia~~a~~~a~~~--~akaIVv~T~SG~TA~~vSr----~rp~~PIiAvT~~~  406 (473)
T TIGR01064       341 LTNFNDRKNSDPKPSTITE-AIALSAVEAAEKL--DAKAIVVLTESGRTARLLSK----YRPNAPIIAVTPNE  406 (473)
T ss_pred             hhhhhhhhcccccCCChHH-HHHHHHHHHHhhc--CCCEEEEEcCChHHHHHHHh----hCCCCCEEEEcCCH
Confidence               111100 0   01122 3455566777776  47899999999999666554    46888999988754

This enzyme is a homotetramer. Some forms are active only in the presence of fructose-1,6-bisphosphate or similar phosphorylated sugars.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=87.91  E-value=9.4  Score=32.83  Aligned_cols=56  Identities=25%  Similarity=0.344  Sum_probs=39.9

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ....+.++.+.+|. ++|..|.+++.+|+.+|.+.+ ++  +.+..+++.++.+|++.+.
T Consensus       160 ~~~~~~~g~~VlV~-G~G~vG~~a~~~a~~~G~~vi-~~--~~~~~~~~~~~~~Ga~~~i  215 (349)
T TIGR03201       160 VQAGLKKGDLVIVI-GAGGVGGYMVQTAKAMGAAVV-AI--DIDPEKLEMMKGFGADLTL  215 (349)
T ss_pred             HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCeEE-EE--cCCHHHHHHHHHhCCceEe
Confidence            33456677764444 459999999999999999643 33  3356778888889986554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK07478 short chain dehydrogenase; Provisional

Probab=87.86  E-value=8.8  Score=31.12  Aligned_cols=72  Identities=15%  Similarity=0.116  Sum_probs=42.2

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK  141 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~  141 (221)
                      ++.+|+.++|.-|.+++......|.+++++...... ......++..|.++..+..+ .+.++..+..+++.++
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            566888888999999999988889986666533211 11233455566666554332 1233334444444443

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=87.62  E-value=10  Score=33.46  Aligned_cols=55  Identities=22%  Similarity=0.366  Sum_probs=41.7

Q ss_pred             cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209           63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI  120 (221)
Q Consensus        63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~  120 (221)
                      ...+.++.+.+| ..+|..|.+++..|+.+|.+.+++.  +.+..+++..+.+|++.+
T Consensus       180 ~~~~~~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~--d~~~~r~~~a~~~Ga~~v  234 (393)
T TIGR02819       180 TAGVGPGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVG--DLNPARLAQARSFGCETV  234 (393)
T ss_pred             hcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEe--CCCHHHHHHHHHcCCeEE
Confidence            345667777555 7779999999999999999876644  235678888889999753

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK08643 acetoin reductase; Validated

Probab=87.58  E-value=9.9  Score=30.82  Aligned_cols=54  Identities=19%  Similarity=0.185  Sum_probs=34.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSL-EKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~-~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|..|.+++......|.+++++....... .....++..+.++..+.
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~   57 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVK   57 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            4668888889999999999888898766654332111 12233444566665543

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=87.47  E-value=8.7  Score=32.77  Aligned_cols=73  Identities=22%  Similarity=0.232  Sum_probs=53.7

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-cCCCCHHHHHHHHHcC-CEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM-PAFMSLEKRIILQAYG-AQLILTNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-p~~~~~~~~~~l~~~G-a~V~~v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+||.+++-.|+++|.-.+++|-+.+++- -.....+..+.++..| +.-..++-+ +.++..+.+.++.++.
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis-~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDIS-DREEIYRLAKKVKKEV  112 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCC-CHHHHHHHHHHHHHhc
Confidence            46778888889999999999999998555543 2234566677777777 333455655 4788899999998887

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=87.26  E-value=13  Score=31.22  Aligned_cols=58  Identities=26%  Similarity=0.274  Sum_probs=42.8

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +...+.+|.+.+|...+|..|.++.-.|+.+|.+.+++.   .+..+.+.++.+|++-+..
T Consensus       137 ~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~---~s~~~~~~l~~~Ga~~vi~  194 (329)
T cd08294         137 EICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCA---GSDDKVAWLKELGFDAVFN  194 (329)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHcCCCEEEe
Confidence            345567777766777789999999999999999854443   3456778888899865443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=86.30  E-value=16  Score=29.61  Aligned_cols=71  Identities=20%  Similarity=0.226  Sum_probs=44.4

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhh
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNK  141 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~  141 (221)
                      +..+|+.++|.-|.+++......|.+++++-. .......+.++..+.++..+..+- +.++..+..++..++
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINI-VEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEecC-cchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999989998765522 223344555666676665544321 233344444444333

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=86.16  E-value=13  Score=30.15  Aligned_cols=54  Identities=19%  Similarity=0.096  Sum_probs=34.7

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|..|.+++......|.+++++...... ......++..|.++..+.
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~   65 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA   65 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEE
Confidence            567888889999999999988889986655432111 112334455566665543

>PRK05866 short chain dehydrogenase; Provisional

Probab=85.97  E-value=12  Score=31.52  Aligned_cols=33  Identities=24%  Similarity=0.263  Sum_probs=26.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA  102 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~  102 (221)
                      ++.+|+..+|..|.+++......|.+++++...
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~   73 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARR   73 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            456888888999999999988889887766543

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=85.54  E-value=26  Score=32.36  Aligned_cols=53  Identities=15%  Similarity=0.167  Sum_probs=41.8

Q ss_pred             CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++. +|+..+.|..|.+.+..|+.+|-+ ++++  +....++++.+.+|++.+.++.
T Consensus       164 pg~-kVlViGaG~iGL~Ai~~Ak~lGA~-V~a~--D~~~~rle~aeslGA~~v~i~~  216 (509)
T PRK09424        164 PPA-KVLVIGAGVAGLAAIGAAGSLGAI-VRAF--DTRPEVAEQVESMGAEFLELDF  216 (509)
T ss_pred             CCC-EEEEECCcHHHHHHHHHHHHCCCE-EEEE--eCCHHHHHHHHHcCCeEEEecc
Confidence            444 489999999999999999999985 3333  4578899999999999765543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=85.36  E-value=18  Score=29.11  Aligned_cols=54  Identities=20%  Similarity=0.252  Sum_probs=36.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+..+|..|.+++......|.+++++...+..  ....+.++..|.++..+.
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK   60 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            567888889999999999998899887765433211  122344556666665544

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=85.28  E-value=8.9  Score=31.88  Aligned_cols=53  Identities=23%  Similarity=0.293  Sum_probs=39.8

Q ss_pred             CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ..++.+ |+..+.|..|..++..|+.+|.+.++++  +.+..+++.++.+|++.+.
T Consensus       118 ~~~g~~-VlV~G~G~vG~~~~~~ak~~G~~~Vi~~--~~~~~r~~~a~~~Ga~~~i  170 (280)
T TIGR03366       118 DLKGRR-VLVVGAGMLGLTAAAAAAAAGAARVVAA--DPSPDRRELALSFGATALA  170 (280)
T ss_pred             CCCCCE-EEEECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCcEec
Confidence            346666 4445679999999999999999755555  4467888889999996554

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=85.23  E-value=17  Score=28.89  Aligned_cols=54  Identities=19%  Similarity=0.188  Sum_probs=34.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|..|.+++......|.+++++......  ......++..+.++..+.
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ   61 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEE
Confidence            466888888999999999988889887666543221  122233444555555543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=85.17  E-value=17  Score=29.13  Aligned_cols=53  Identities=21%  Similarity=0.257  Sum_probs=33.4

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILT  122 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v  122 (221)
                      ++.+|+.++|..|.+++......|.+++++...... ......++..+.++..+
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~   61 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIA   61 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEE
Confidence            456888888999999999888889876666533211 11223344445555443

>PRK15408 autoinducer 2-binding protein lsrB; Provisional

Probab=85.06  E-value=24  Score=30.43  Aligned_cols=45  Identities=9%  Similarity=0.210  Sum_probs=32.5

Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC-CcEEEEEeC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP-EIKVYGVEP  210 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~-~~kvigVe~  210 (221)
                      ....++++.- +++|.||++  +...+.|+..++++.+. +++|+|+..
T Consensus       198 ~~~~~lL~~~-pdi~aI~~~--~~~~~~Ga~~Al~~~g~~~v~VvG~D~  243 (336)
T PRK15408        198 QTAEGILKAY-PDLDAIIAP--DANALPAAAQAAENLKRDKVAIVGFST  243 (336)
T ss_pred             HHHHHHHHHC-CCCcEEEEC--CCccHHHHHHHHHhCCCCCEEEEEeCC
Confidence            3556666664 689999987  44455678889988763 688898864

>PRK06194 hypothetical protein; Provisional

Probab=84.85  E-value=18  Score=29.86  Aligned_cols=55  Identities=25%  Similarity=0.262  Sum_probs=35.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++.+|+.++|.-|.+++......|.+++++-..... ......+...|.++..+..
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   62 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRT   62 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEEC
Confidence            566888889999999999888889887665432111 2223344445667755543

>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6

Probab=84.65  E-value=14  Score=32.82  Aligned_cols=126  Identities=17%  Similarity=0.204  Sum_probs=70.1

Q ss_pred             EeeCCC-hHHHHHHHHHHHcCCeEEEEecC-CC---CH-HHHHHHHHcCC-EEEEeCCCCChhHHHHHHHHHHhhCCCee
Q 043209           74 IECTSG-NTGIGMACFAAAKGYKLILVMPA-FM---SL-EKRIILQAYGA-QLILTNAEMGIDEEFRIVEELLNKIPTSF  146 (221)
Q Consensus        74 v~assG-N~~~alA~~a~~~g~~~~ivvp~-~~---~~-~~~~~l~~~Ga-~V~~v~~~~~~~~~~~~a~~~~~~~~~~~  146 (221)
                      +..|+| .+...+.+...+.+.+++.|.-+ .-   .. ...+....+|| +++.++....|.  .+.+...-+.  +..
T Consensus         2 LAySGGLDTS~~l~~L~e~~~~~Via~~aDlGq~~~d~~~i~~kA~~~Ga~~~~vvD~r~ef~--~~~i~~aI~a--nA~   77 (388)
T PF00764_consen    2 LAYSGGLDTSVILKWLKEEGGYEVIAVTADLGQPDEDLEAIEEKALKLGASKHIVVDARDEFA--EDYIFPAIKA--NAL   77 (388)
T ss_dssp             EE--SSHHHHHHHHHHHHTTTEEEEEEEEESSST-S-HHHHHHHHHHHT-SEEEEEE-HHHHH--HHTHHHHHHT--T--
T ss_pred             eeeCCChHHHHHHHHHHhhcCceEEEEEEECCCcHHHHHHHHHHHHhcCCceeeecchHHHHH--HHHHHHHHHH--HHH
Confidence            445555 56667777777777998887633 22   22 23445788999 999887642221  1222222222  233


Q ss_pred             ecCCCC---CCccHHHHHhhHHHHHHHhhCCCCCEEEE-ccCchhHHHHHHHHHHhcCCCcEEEE
Q 043209          147 NPHQFK---NPANPKTHYETTGPEIWEGTRGQVDIFVS-GIGTGGTVSGVGNFLKKKNPEIKVYG  207 (221)
Q Consensus       147 ~~~~~~---n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~-p~G~Gg~~~Gi~~~~~~~~~~~kvig  207 (221)
                      |.+.|-   ....+.  ......|+.++.  ..++|.- ++|.|--..=.-.+++.+.|+.+|++
T Consensus        78 Yeg~YpL~tsl~Rpl--Ia~~~v~~A~~~--ga~~vaHG~TgkGNDqvRFe~~~~al~P~l~via  138 (388)
T PF00764_consen   78 YEGRYPLSTSLARPL--IAKKLVEVAREE--GADAVAHGCTGKGNDQVRFELSIRALAPELKVIA  138 (388)
T ss_dssp             BTTTB--CCCCHHHH--HHHHHHHHHHHH--T-SEEE----TTSSHHHHHHHHHHHHSTTSEEE-
T ss_pred             hCCCccccccchHHH--HHHHHHHHHHHc--CCeEEeccCCcCCCchhHHHHHHHHhCcCCcEec
Confidence            333331   122222  344556777776  4688887 55889999999999999999999875

3.4.5 from EC) (AS) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate [, ]. In humans, a defect in the AS gene causes citrullinemia, a genetic disease characterised by severe vomiting spells and mental retardation. AS is a homotetrameric enzyme of chains of about 400 amino-acid residues. An arginine seems to be important for the enzyme's catalytic mechanism. The sequences of AS from various prokaryotes, archaebacteria and eukaryotes show significant similarity.; GO: 0004055 argininosuccinate synthase activity, 0005524 ATP binding, 0006526 arginine biosynthetic process; PDB: 1K97_A 1KP2_A 1K92_A 1KP3_A 2NZ2_A 1VL2_A 1J1Z_D 1KOR_C 1J20_D 1KH2_C ....

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=84.56  E-value=18  Score=31.29  Aligned_cols=87  Identities=17%  Similarity=0.203  Sum_probs=57.9

Q ss_pred             eEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCC-hhHHHHHHHHHHhhCCCeeec
Q 043209           71 TVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG-IDEEFRIVEELLNKIPTSFNP  148 (221)
Q Consensus        71 ~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~-~~~~~~~a~~~~~~~~~~~~~  148 (221)
                      .+++.+++|..|.-.|..--.. |=++.++.-..-...-.+..+++|++|..|+.+.+ -..-....+.+++..++.+|+
T Consensus        69 ~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv  148 (385)
T KOG2862|consen   69 QTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFV  148 (385)
T ss_pred             ceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEE
Confidence            4589999998887766554444 44444444443355567888999999999965422 113355666777777899999


Q ss_pred             CCCCCCccH
Q 043209          149 HQFKNPANP  157 (221)
Q Consensus       149 ~~~~n~~~~  157 (221)
                      -+.++.-..
T Consensus       149 ~hgdsSTgV  157 (385)
T KOG2862|consen  149 THGDSSTGV  157 (385)
T ss_pred             EecCccccc
Confidence            888765443

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=84.39  E-value=27  Score=33.00  Aligned_cols=52  Identities=15%  Similarity=0.205  Sum_probs=42.1

Q ss_pred             eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      ..++.++.|..|+.++..-+..|++.+++   +.+..+.+.++..|.+|+.-|..
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvI---D~d~~~v~~~~~~g~~v~~GDat  452 (621)
T PRK03562        401 PRVIIAGFGRFGQIVGRLLLSSGVKMTVL---DHDPDHIETLRKFGMKVFYGDAT  452 (621)
T ss_pred             CcEEEEecChHHHHHHHHHHhCCCCEEEE---ECCHHHHHHHHhcCCeEEEEeCC
Confidence            34999999999999999999899987766   33567788888889888776654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=84.11  E-value=19  Score=28.79  Aligned_cols=54  Identities=19%  Similarity=0.185  Sum_probs=36.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|..|.+++......|.+++++..... .....+.++..+.++..+.
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   61 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ   61 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            56688888999999999998888987766654321 1223344555666655443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=84.08  E-value=18  Score=29.07  Aligned_cols=53  Identities=13%  Similarity=0.141  Sum_probs=35.2

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILT  122 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v  122 (221)
                      +..+|+.++|..|.++|......|.+.+++.....  ....+..++..|.++...
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~   58 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIAS   58 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEE
Confidence            56688889999999999999889987666543221  112234445566666543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=83.87  E-value=13  Score=30.23  Aligned_cols=73  Identities=22%  Similarity=0.243  Sum_probs=45.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      ++.+|+..+|.-|.+++......|.+++++-.........+.++..|.++..+..+ .+.++..+...+..++.
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            56788899999999999999889998776654322223334555667776544322 13444455555554443

>PRK07791 short chain dehydrogenase; Provisional

Probab=83.79  E-value=21  Score=29.83  Aligned_cols=32  Identities=25%  Similarity=0.399  Sum_probs=26.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      +++.+|+..++.-|.++|......|.+++++.
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~   37 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVND   37 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEee
Confidence            36778888889999999999888998876654

>PRK08278 short chain dehydrogenase; Provisional

Probab=83.75  E-value=23  Score=29.18  Aligned_cols=54  Identities=22%  Similarity=0.243  Sum_probs=36.7

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+..+|-.|.+++......|.+++++......        ....+.++..|.+++.+.
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   68 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLV   68 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEE
Confidence            566888888999999999998899988777644221        111234555666665543

>PRK05993 short chain dehydrogenase; Provisional

Probab=83.44  E-value=21  Score=29.46  Aligned_cols=68  Identities=18%  Similarity=0.205  Sum_probs=45.3

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHh
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLN  140 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~  140 (221)
                      ++..+|+.++|..|.+++......|.+++++...   ..+++.++..+.+++.++-. +.++..+...+..+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~---~~~~~~l~~~~~~~~~~Dl~-d~~~~~~~~~~~~~   71 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRK---EEDVAALEAEGLEAFQLDYA-EPESIAALVAQVLE   71 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCceEEEccCC-CHHHHHHHHHHHHH
Confidence            3566888888999999999988889987766533   44555566667777766654 23344444444433

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=83.26  E-value=4.1  Score=35.49  Aligned_cols=88  Identities=17%  Similarity=0.244  Sum_probs=52.3

Q ss_pred             eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhCCCe-eec
Q 043209           71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKIPTS-FNP  148 (221)
Q Consensus        71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~~~~-~~~  148 (221)
                      ..++..+||..+..+|..+...+-.-.|++|.-+.......+...|+++++++-+ .++.=..+..++...+.... +..
T Consensus        41 ~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~  120 (363)
T PF01041_consen   41 KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVV  120 (363)
T ss_dssp             SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE
T ss_pred             CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEe
Confidence            3488889998888888877443333788999988889999999999999999854 22332223333333332233 344


Q ss_pred             CCCCCCccHH
Q 043209          149 HQFKNPANPK  158 (221)
Q Consensus       149 ~~~~n~~~~~  158 (221)
                      +.+.++..+.
T Consensus       121 h~~G~~~d~~  130 (363)
T PF01041_consen  121 HLFGNPADMD  130 (363)
T ss_dssp             -GGGB---HH
T ss_pred             cCCCCcccHH
Confidence            5556665554

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=83.23  E-value=31  Score=32.46  Aligned_cols=51  Identities=14%  Similarity=0.228  Sum_probs=40.1

Q ss_pred             EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      .++.++.|..|+.++..-...|++++++=   .++.+.+.++..|.+++.-|..
T Consensus       402 ~vII~G~Gr~G~~va~~L~~~g~~vvvID---~d~~~v~~~~~~g~~v~~GDat  452 (601)
T PRK03659        402 QVIIVGFGRFGQVIGRLLMANKMRITVLE---RDISAVNLMRKYGYKVYYGDAT  452 (601)
T ss_pred             CEEEecCchHHHHHHHHHHhCCCCEEEEE---CCHHHHHHHHhCCCeEEEeeCC
Confidence            48999999999999999888999876664   2466777778888887765543

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=83.13  E-value=18  Score=31.26  Aligned_cols=57  Identities=21%  Similarity=0.230  Sum_probs=41.2

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +.+.+.++++.+|. ++|-.|.++...|+.+|.+.++.+  +.+..+++.++.+|++-+.
T Consensus       170 ~~~~~~~g~~VlV~-G~g~vG~~a~~~ak~~G~~~Vi~~--~~~~~~~~~~~~~Ga~~~i  226 (358)
T TIGR03451       170 NTGGVKRGDSVAVI-GCGGVGDAAIAGAALAGASKIIAV--DIDDRKLEWAREFGATHTV  226 (358)
T ss_pred             hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEE--cCCHHHHHHHHHcCCceEE
Confidence            34556777775655 579999999999999998755554  2356778888889986443

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK08303 short chain dehydrogenase; Provisional

Probab=83.09  E-value=23  Score=30.04  Aligned_cols=73  Identities=18%  Similarity=0.181  Sum_probs=43.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-----------CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHH
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-----------SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEE  137 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-----------~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~  137 (221)
                      +..+|+.+++--|.++|......|.+++++.....           .....+.++..|.+++.+..+ .+.++..+.+.+
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~   88 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER   88 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            56688888888999999998889998776653311           112233455566665544322 134445555555


Q ss_pred             HHhhC
Q 043209          138 LLNKI  142 (221)
Q Consensus       138 ~~~~~  142 (221)
                      ..+..
T Consensus        89 ~~~~~   93 (305)
T PRK08303         89 IDREQ   93 (305)
T ss_pred             HHHHc
Confidence            54443

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=83.08  E-value=9.4  Score=25.24  Aligned_cols=49  Identities=18%  Similarity=0.116  Sum_probs=38.1

Q ss_pred             EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-----H----HHHHHHHHcCCEEEE
Q 043209           73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-----L----EKRIILQAYGAQLIL  121 (221)
Q Consensus        73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-----~----~~~~~l~~~Ga~V~~  121 (221)
                      ++.-++|..|.-+|...+.+|.+++++.+.+..     .    .-.+.++..|.+++.
T Consensus         2 vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~   59 (80)
T PF00070_consen    2 VVVIGGGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHT   59 (80)
T ss_dssp             EEEESSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEE
T ss_pred             EEEECcCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEe
Confidence            678899999999999999999999999865421     1    124567778877765

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>TIGR00670 asp_carb_tr aspartate carbamoyltransferase

Probab=82.59  E-value=9  Score=32.79  Aligned_cols=60  Identities=22%  Similarity=0.182  Sum_probs=42.6

Q ss_pred             cCCCCCCCeEEEeeCC---ChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCC
Q 043209           63 KGLITPGKTVLIECTS---GNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        63 ~g~~~~g~~~vv~ass---GN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      .|.+ .|.+ |+..+-   +|.++|+..+++++|++++++.|+..  +...++.++..|++|...+.
T Consensus       145 ~g~l-~g~~-va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~~d  209 (301)
T TIGR00670       145 FGRL-DGLK-IALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPKEILEELKAKGIKVRETES  209 (301)
T ss_pred             hCCC-CCCE-EEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHcCCEEEEECC
Confidence            4543 2344 444444   69999999999999999999999863  54555666677888766543

Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=82.54  E-value=7.9  Score=33.52  Aligned_cols=63  Identities=14%  Similarity=0.199  Sum_probs=52.1

Q ss_pred             HHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           58 KDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        58 ~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      -+|-+.+.+++|.+ ++..+.|.-|......|+.+|-+=++++  +....+++..+.+||+++.-.
T Consensus       159 ~HAcr~~~vk~Gs~-vLV~GAGPIGl~t~l~Aka~GA~~VVi~--d~~~~Rle~Ak~~Ga~~~~~~  221 (354)
T KOG0024|consen  159 VHACRRAGVKKGSK-VLVLGAGPIGLLTGLVAKAMGASDVVIT--DLVANRLELAKKFGATVTDPS  221 (354)
T ss_pred             hhhhhhcCcccCCe-EEEECCcHHHHHHHHHHHHcCCCcEEEe--ecCHHHHHHHHHhCCeEEeec
Confidence            35566677888865 8999999999999999999999877777  457889999999999998644

>PRK06181 short chain dehydrogenase; Provisional

Probab=82.54  E-value=21  Score=28.99  Aligned_cols=54  Identities=22%  Similarity=0.217  Sum_probs=34.7

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+..+|..|.+++......|.+++++...... ....+.++..+.++..+.
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~   56 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVP   56 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            345888888999999999888889877666543211 122334455566655443

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=82.51  E-value=26  Score=29.97  Aligned_cols=57  Identities=25%  Similarity=0.411  Sum_probs=42.3

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.++.+.+| ...|..|.++...|+.+|.+.++.+..  +..+.+.++.+|++.+.
T Consensus       168 ~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~--~~~~~~~~~~~g~~~v~  224 (350)
T cd08256         168 DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDL--KDERLALARKFGADVVL  224 (350)
T ss_pred             HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcC--CHHHHHHHHHcCCcEEe
Confidence            4455677776555 667999999999999999876666543  46777788889986554

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=82.30  E-value=12  Score=32.19  Aligned_cols=53  Identities=19%  Similarity=0.222  Sum_probs=39.1

Q ss_pred             CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ..++.+.+|. ++|..|.+....|+.+|.+.++++.  .+..+++.++.+|++.+.
T Consensus       167 ~~~g~~VlV~-G~G~vG~~aiqlak~~G~~~Vi~~~--~~~~~~~~a~~lGa~~vi  219 (343)
T PRK09880        167 DLQGKRVFVS-GVGPIGCLIVAAVKTLGAAEIVCAD--VSPRSLSLAREMGADKLV  219 (343)
T ss_pred             CCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEEe--CCHHHHHHHHHcCCcEEe
Confidence            3456665554 5699999999999999986555443  356788888999997654

>PRK05854 short chain dehydrogenase; Provisional

Probab=82.18  E-value=19  Score=30.53  Aligned_cols=72  Identities=21%  Similarity=0.207  Sum_probs=41.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHc--CCEEEE--eCCCCChhHHHHHHHHHHhhC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAY--GAQLIL--TNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~--Ga~V~~--v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      ++.+|+.+++--|.++|..-.+.|.++++....... ...++.++..  +.++..  ++-. +.++..+.+.++.++.
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~-d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLS-SLASVAALGEQLRAEG   91 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCC-CHHHHHHHHHHHHHhC
Confidence            567888888889999998888889877666543211 1122333322  344443  3433 3555555666655544

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=81.84  E-value=16  Score=31.65  Aligned_cols=57  Identities=19%  Similarity=0.300  Sum_probs=41.1

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.++.+.+|. ++|..|..++..|+.+|.+.++++  +.+..+++.++.+|++.+.
T Consensus       185 ~~~~i~~g~~VlV~-G~G~vG~~a~~lak~~G~~~Vi~~--~~~~~r~~~a~~~Ga~~~i  241 (371)
T cd08281         185 NTAGVRPGQSVAVV-GLGGVGLSALLGAVAAGASQVVAV--DLNEDKLALARELGATATV  241 (371)
T ss_pred             hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCcEEEE--cCCHHHHHHHHHcCCceEe
Confidence            34456777775664 578999999999999998544444  2356788888889996544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=81.76  E-value=24  Score=28.16  Aligned_cols=67  Identities=24%  Similarity=0.233  Sum_probs=43.4

Q ss_pred             hHHHHHHHHHHHHc---CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEE
Q 043209           50 DRIAFSMIKDAEEK---GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLI  120 (221)
Q Consensus        50 ~R~a~~~~~~a~~~---g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~  120 (221)
                      -+++.+.+..+.+.   +.--.|+ +++.-+.||.|..+|......|.+++++ .  .+..+++.+. .+|++.+
T Consensus         6 g~Gv~~~~~~~~~~~~~~~~l~gk-~v~I~G~G~vG~~~A~~L~~~G~~Vvv~-D--~~~~~~~~~~~~~g~~~v   76 (200)
T cd01075           6 AYGVFLGMKAAAEHLLGTDSLEGK-TVAVQGLGKVGYKLAEHLLEEGAKLIVA-D--INEEAVARAAELFGATVV   76 (200)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEE-c--CCHHHHHHHHHHcCCEEE
Confidence            35677777776655   2222344 4888888999999999999999987743 2  2344444443 3476543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06182 short chain dehydrogenase; Validated

Probab=81.74  E-value=25  Score=28.84  Aligned_cols=68  Identities=19%  Similarity=0.202  Sum_probs=46.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhh
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNK  141 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~  141 (221)
                      +..+|+.++|..|.+++......|.+++++...   ..+++.+...+.+++.++-. +.++..+..+++.++
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~---~~~l~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~   71 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARR---VDKMEDLASLGVHPLSLDVT-DEASIKAAVDTIIAE   71 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhCCCeEEEeeCC-CHHHHHHHHHHHHHh
Confidence            566888888999999999988889987776533   34455555567777776654 344444445555444

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=81.58  E-value=9.8  Score=32.20  Aligned_cols=58  Identities=26%  Similarity=0.306  Sum_probs=43.1

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +.+.+.+|.+.+|...+|..|.+++..|+.+|.+.++..   .+..+.+.++.+|++.+..
T Consensus       132 ~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~---~s~~~~~~~~~lGa~~vi~  189 (325)
T TIGR02825       132 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAA---GSDEKVAYLKKLGFDVAFN  189 (325)
T ss_pred             HHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHcCCCEEEe
Confidence            445677787766666679999999999999999755443   2466788888899865543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=81.46  E-value=19  Score=26.87  Aligned_cols=71  Identities=23%  Similarity=0.322  Sum_probs=46.7

Q ss_pred             eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCH----HHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhh
Q 043209           71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSL----EKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNK  141 (221)
Q Consensus        71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~----~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~  141 (221)
                      +.+|+.+++..|++++......|-..++++..+.+.    ..+..++..|.++..+..+. +.++..+..++..+.
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKR   77 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccc
Confidence            458888899999999999888877676666554222    23455677889888776432 234445555555433

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=81.36  E-value=30  Score=28.96  Aligned_cols=54  Identities=20%  Similarity=0.231  Sum_probs=36.2

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+..+|.-|.+++......|.+++++......  ......++..|.++..+.
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~  102 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIP  102 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEE
Confidence            566888888999999999988889987766543211  222344455566665443

>PRK08703 short chain dehydrogenase; Provisional

Probab=81.22  E-value=26  Score=28.05  Aligned_cols=32  Identities=38%  Similarity=0.364  Sum_probs=26.1

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+.++|..|.+++......|.+++++..
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r   38 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVAR   38 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence            56688888999999999988888987666543

>PRK07806 short chain dehydrogenase; Provisional

Probab=81.08  E-value=27  Score=28.03  Aligned_cols=54  Identities=19%  Similarity=0.171  Sum_probs=35.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-H-HHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-L-EKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~-~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+..+|..|.+++......|.+++++...... . .....++..+.++..+.
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~   62 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVG   62 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEE
Confidence            566888888999999999988889988776543211 1 11233455566665443

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=81.04  E-value=47  Score=30.83  Aligned_cols=52  Identities=21%  Similarity=0.192  Sum_probs=41.6

Q ss_pred             eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      .+++..+.|+.|+.++..-+..|.+++++-+   ++++.+.++..|.+++.-|..
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~---d~~~~~~~~~~g~~~i~GD~~  469 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIET---SRTRVDELRERGIRAVLGNAA  469 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHCCCeEEEcCCC
Confidence            4589999999999999999999998766643   356777778888888876654

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=80.95  E-value=32  Score=29.21  Aligned_cols=57  Identities=26%  Similarity=0.225  Sum_probs=42.3

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQA-YGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~-~Ga~V~~  121 (221)
                      +...+.+|.+.+|.+.+|..|.++.-.|+.+|.+.++..   .+..+.+.++. +|++-+.
T Consensus       145 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~---~~~~~~~~~~~~lGa~~vi  202 (338)
T cd08295         145 EVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSA---GSDEKVDLLKNKLGFDDAF  202 (338)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHhcCCceeE
Confidence            345577888877777779999999999999999854443   34667777777 8986443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK07774 short chain dehydrogenase; Provisional

Probab=80.67  E-value=28  Score=27.94  Aligned_cols=32  Identities=19%  Similarity=0.260  Sum_probs=26.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+.++|-.|.+++......|.+++++..
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r   38 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADI   38 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888899999999999888988776653

>PRK07062 short chain dehydrogenase; Provisional

Probab=80.29  E-value=30  Score=28.13  Aligned_cols=33  Identities=9%  Similarity=0.165  Sum_probs=27.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA  102 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~  102 (221)
                      +..+|+.+++..|.+++......|.+++++...
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~   41 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRD   41 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            567888888999999999998889987666543

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=80.12  E-value=4.2  Score=31.04  Aligned_cols=41  Identities=20%  Similarity=0.159  Sum_probs=32.6

Q ss_pred             EEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcC
Q 043209           73 LIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG  116 (221)
Q Consensus        73 vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~G  116 (221)
                      |..-++||+|.|+|......|.+++++.++.   ...+.++..+
T Consensus         2 I~ViGaG~~G~AlA~~la~~g~~V~l~~~~~---~~~~~i~~~~   42 (157)
T PF01210_consen    2 IAVIGAGNWGTALAALLADNGHEVTLWGRDE---EQIEEINETR   42 (157)
T ss_dssp             EEEESSSHHHHHHHHHHHHCTEEEEEETSCH---HHHHHHHHHT
T ss_pred             EEEECcCHHHHHHHHHHHHcCCEEEEEeccH---HHHHHHHHhC
Confidence            6778999999999999999999999998753   4455554433

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	221
1z7w_A	322	Crystal Structure Of O-Acetylserine Sulfhydrylase F		4e-74
2isq_A	320	Crystal Structure Of O-Acetylserine Sulfhydrylase F		5e-74
1z7y_A	322	Crystal Structure Of The Arabidopsis Thaliana O-Ace		2e-73
4aec_A	430	Crystal Structure Of The Arabidopsis Thaliana O-Ace		2e-71
3vbe_A	344	Crystal Structure Of Beta-Cyanoalanine Synthase In		4e-66
3vc3_A	344	Crystal Structure Of Beta-Cyanoalanine Synthase K95		2e-65
2egu_A	308	Crystal Structure Of O-Acetylserine Sulfhydrase Fro		3e-50
2q3d_A	313	2.2 A Resolution Crystal Structure Of O-acetylserin		3e-50
3rr2_A	314	Structure Of A Cysteine Synthase (O-Acetylserine Su		1e-49
2q3b_A	313	1.8 A Resolution Crystal Structure Of O-Acetylserin		2e-49
4i1y_A	314	The Structure Of Cysteine Synthase From Mycobacteri		3e-49
1ve1_A	304	Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfh		5e-49
4air_A	354	Leishmania Major Cysteine Synthase Length = 354		2e-42
3t4p_A	334	Crystal Structure Of O-Acetyl Serine Sulfhydrylase		2e-41
1oas_A	322	O-Acetylserine Sulfhydrylase From Salmonella Typhim		8e-40
1d6s_A	322	Crystal Structure Of The K41a Mutant Of O-Acetylser		4e-39
2bht_A	303	Crystal Structure Of O-Acetylserine Sulfhydrylase B		4e-39
2bhs_A	303	Crystal Structure Of Cysteine Synthase B Length = 3		7e-39
2jc3_A	303	Structure Of O-acetylserine Sulfhydrylase B From Sa		8e-39
2v03_A	303	High Resolution Structure And Catalysis Of An O- Ac		3e-38
3pc2_A	527	Full Length Structure Of Cystathionine Beta-Synthas		2e-34
1m54_A	363	Cystathionine-Beta Synthase: Reduced Vicinal Thiols		2e-34
1jbq_A	435	Structure Of Human Cystathionine Beta-Synthase: A U		4e-34
3dwg_A	325	Crystal Structure Of A Sulfur Carrier Protein Compl		7e-32
3dwi_A	323	Crystal Structure Of Mycobacterium Tuberculosis Cys		2e-31
3dki_A	326	2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobac		3e-31
3bm5_A	338	Crystal Structure Of O-Acetyl-Serine Sulfhydrylase		4e-31
2pqm_A	343	Crystal Structure Of Cysteine Synthase (Oass) From		4e-31
1o58_A	303	Crystal Structure Of O-Acetylserine Sulfhydrylase (		4e-31
3fca_A	291	Genetic Incorporation Of A Metal-Ion Chelating Amin		7e-31
1y7l_A	316	O-Acetylserine Sulfhydrylase Complex Length = 316		2e-30
1wkv_A	389	Crystal Structure Of O-Phosphoserine Sulfhydrylase		4e-06
1uim_A	351	Crystal Structure Of Threonine Synthase From Thermu		9e-06
3vsc_A	389	Crystal Structure Of The K127a Mutant Of O-Phosphos		2e-05

>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana Length = 322

Iteration: 1
 Score =  273 bits (699), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 131/213 (61%), Positives = 160/213 (75%)
Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+TELIGNTP+VYLNN+ +GC  R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI 
Sbjct: 5   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64
Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+   G
Sbjct: 65  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
           +       EE+L K P  +   QF+NPANPK HYETTGPEIW+GT G++D F        
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                  +LK++N  +K+YGVEP ESAIL+GGK
Sbjct: 185 TITGAGKYLKEQNANVKLYGVEPVESAILSGGK 217

>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana In Complex With C-Terminal Peptide From Arabidopsis Serine Acetyltransferase Length = 320

Iteration: 1
 Score =  273 bits (698), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 131/213 (61%), Positives = 160/213 (75%)
Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+TELIGNTP+VYLNN+ +GC  R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI 
Sbjct: 3   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 62
Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+   G
Sbjct: 63  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 122
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
           +       EE+L K P  +   QF+NPANPK HYETTGPEIW+GT G++D F        
Sbjct: 123 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 182
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                  +LK++N  +K+YGVEP ESAIL+GGK
Sbjct: 183 TITGAGKYLKEQNANVKLYGVEPVESAILSGGK 215

>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetylserine Sulfhydrylase K46a Mutant Length = 322

Iteration: 1
 Score =  271 bits (694), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 130/213 (61%), Positives = 159/213 (74%)
Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+TELIGNTP+VYLNN+ +GC  R+AAKLEMMEPCSSV DRI FSMI DAE+KGLI 
Sbjct: 5   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVADRIGFSMISDAEKKGLIK 64
Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+   G
Sbjct: 65  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
           +       EE+L K P  +   QF+NPANPK HYETTGPEIW+GT G++D F        
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                  +LK++N  +K+YGVEP ESAIL+GGK
Sbjct: 185 TITGAGKYLKEQNANVKLYGVEPVESAILSGGK 217

>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl- Serine-(Thiol)-Lyase C Length = 430

Iteration: 1
 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 123/219 (56%), Positives = 163/219 (74%)
Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G +   IA+++++LIG TPMVYLN+I  GC A IAAKLE+MEPC SVKDRI +SM+ DAE
Sbjct: 107 GPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAE 166
Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           +KG I+PGK+VL+E TSGNTGIG+A  AA++GY+LIL MPA MS+E+R++L+A+GA+L+L
Sbjct: 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
           T+   G+    +  EE+L   P ++   QF NPANPK HYETTGPEIW+ T+G+VDIF  
Sbjct: 227 TDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVA 286
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                        F+K+KNP+ +V GVEP ES IL+GGK
Sbjct: 287 GIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK 325

>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean Length = 344

Iteration: 1
 Score =  247 bits (630), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 116/219 (52%), Positives = 149/219 (68%)
Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G     I   +++LIG TP+VYLN + +GC A +A K EMM+P +S+KDR A++MI DAE
Sbjct: 19  GHASTNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIKDRPAYAMITDAE 78
Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           EK LITPGKT LIE TSGN GI MA  AA KGYK++L MP++ SLE+R+ ++A+GA+LIL
Sbjct: 79  EKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELIL 138
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
           T+   G+    +   ELL   P +    QF NPAN + H+ETTGPEIWE T GQVDIF  
Sbjct: 139 TDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVM 198
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                        +LK KNP +K+YGVEP+ES +LNGGK
Sbjct: 199 GIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGK 237

>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a Mutant In Soybean Length = 344

Iteration: 1
 Score =  244 bits (624), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 115/219 (52%), Positives = 148/219 (67%)
Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G     I   +++LIG TP+VYLN + +GC A +A K EMM+P +S+ DR A++MI DAE
Sbjct: 19  GHASTNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAE 78
Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           EK LITPGKT LIE TSGN GI MA  AA KGYK++L MP++ SLE+R+ ++A+GA+LIL
Sbjct: 79  EKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELIL 138
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
           T+   G+    +   ELL   P +    QF NPAN + H+ETTGPEIWE T GQVDIF  
Sbjct: 139 TDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVM 198
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                        +LK KNP +K+YGVEP+ES +LNGGK
Sbjct: 199 GIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGK 237

>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From Geobacillus Kaustophilus Hta426 Length = 308

Iteration: 1
 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/211 (51%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 10  NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
           N ITELIG+TP V LN IVD   A +  KLE M P SSVKDRIA +MI+ AE+ G + PG
Sbjct: 6   NSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG 65
Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
            T+ +E TSGNTGIG+A  AAAKGYK +LVMP  MSLE+R +L+AYGA+L+LT    G+ 
Sbjct: 66  DTI-VEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMR 124
Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXX 189
                 EEL+ +    F P QFKN ANP+ H  TTG EI E    Q+D F          
Sbjct: 125 GAIAKAEELVRE-HGYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTI 183
Query: 190 XXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                 L++  P IK+Y VEPA+S +L+GGK
Sbjct: 184 TGAGKVLREAYPNIKIYAVEPADSPVLSGGK 214

>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine Sulfhydrylase (oass) From Mycobacterium Tuberculosis In Complex With The Reaction Intermediate Alpha-aminoacrylate Length = 313

Iteration: 1
 Score =  194 bits (493), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 130/214 (60%), Gaps = 1/214 (0%)
Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           +IA DIT+LIG TP+V L  + DG  A I AKLE   P +SVKDRI  +M++ AE+ GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 64
Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
            P  T+++E TSGNTGI +A   AA+GY+ +L MP  MSLE+R++L+AYGA+LILT    
Sbjct: 65  KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
           G+       EEL       F P QF+NPANP  H  TT  E+W  T G+VDI        
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183
Query: 187 XXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                    +K++ P  +   VEPA S +L+GG+
Sbjct: 184 GTITGVAQVIKERKPSARFVAVEPAASPVLSGGQ 217

>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc Baa-535 M Length = 314

Iteration: 1
 Score =  192 bits (489), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/219 (44%), Positives = 130/219 (59%), Gaps = 1/219 (0%)
Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G     IA +IT+LIG TP+V L  + DG  A + AKLE   P  S+KDRI  +MI  AE
Sbjct: 1   GPGSMTIAENITQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAE 60
Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           + GLI P  T+++E TSGNTGI +A  +AA+GYK +L MP  MS+E+R++L+AYGA+L+L
Sbjct: 61  KAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVL 119
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
           T    G+       EEL       F P QF+NPANP  H  TT  E+W  T G+VDIF  
Sbjct: 120 TPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVS 179
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                         +K++ P  +   VEPA S +L+GG+
Sbjct: 180 GVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQ 218

>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine Sulfhydrylase (Oass) Holoenzyme From Mycobacterium Tuberculosis Length = 313

Iteration: 1
 Score =  192 bits (487), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 129/214 (60%), Gaps = 1/214 (0%)
Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           +IA DIT+LIG TP+V L  + DG  A I AKLE   P +SV DRI  +M++ AE+ GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVXDRIGVAMLQAAEQAGLI 64
Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
            P  T+++E TSGNTGI +A   AA+GY+ +L MP  MSLE+R++L+AYGA+LILT    
Sbjct: 65  KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
           G+       EEL       F P QF+NPANP  H  TT  E+W  T G+VDI        
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183
Query: 187 XXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                    +K++ P  +   VEPA S +L+GG+
Sbjct: 184 GTITGVAQVIKERKPSARFVAVEPAASPVLSGGQ 217

>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium Ulcerans Agy99 Length = 314

Iteration: 1
 Score =  191 bits (484), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 96/219 (43%), Positives = 129/219 (58%), Gaps = 1/219 (0%)
Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G     IA +I +LIG TP+V L  + DG  A + AKLE   P  S+KDRI  +MI  AE
Sbjct: 1   GPGSMTIAENIAQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAE 60
Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           + GLI P  T+++E TSGNTGI +A  +AA+GYK +L MP  MS+E+R++L+AYGA+L+L
Sbjct: 61  KAGLIKP-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVL 119
Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXX 181
           T    G+       EEL       F P QF+NPANP  H  TT  E+W  T G+VDIF  
Sbjct: 120 TPGAEGMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVS 179
Query: 182 XXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                         +K++ P  +   VEPA S +L+GG+
Sbjct: 180 GVGTGGTITGVAQVIKQRRPSAQFVAVEPAASPVLSGGQ 218

>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfhydrylase Length = 304

Iteration: 1
 Score =  190 bits (483), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 99/210 (47%), Positives = 138/210 (65%), Gaps = 10/210 (4%)
Query: 16  IGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK-TVLI 74
           IG TP+V L  +V+   A +  KLE + P  S+KDR A+ MIKDAEE+G++ PG   V++
Sbjct: 7   IGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIV 66
Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI----DE 130
           E TSGNTGIG+A  AA++GY+LIL MPA MS E++ +L+A+GA+L+LT+ E  +    +E
Sbjct: 67  EPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREE 126
Query: 131 EFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXX 190
             R+ EEL      +F P QFKNPAN + HYETTGPE++E   G++D F           
Sbjct: 127 ALRLKEEL-----GAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181
Query: 191 XXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
               +LK++ P +KV  VEPA S +L+GGK
Sbjct: 182 GVGRYLKERIPHVKVIAVEPARSNVLSGGK 211

>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase Length = 354

Iteration: 1
 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 127/213 (59%), Gaps = 1/213 (0%)
Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           +A  I +LIG TP +YLN + +  KA++  K+E   P +SVKDR+ F++   AE++G + 
Sbjct: 32  VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLI 90
Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PGK+V++E +SGNTG+ +A   A +GYK+I+ MP  MSLE+R +L+ +GA++ILT A +G
Sbjct: 91  PGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALG 150
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
           +     + ++++   P +    QF    N   H ETTGPEIWE T   VD F        
Sbjct: 151 MKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGG 210
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                   LKK     ++  VEP ES +L+GGK
Sbjct: 211 TLTGVARALKKMGSHARIVAVEPMESPVLSGGK 243

>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From Leishmania Donovani In Complex With Designed Tetrapeptide Length = 334

Iteration: 1
 Score =  165 bits (418), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 126/213 (59%), Gaps = 1/213 (0%)
Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           +A  I +LIG TP +YLN + +  KA++  K+E   P +SV DR+ F++   AE++G + 
Sbjct: 11  VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVXDRLGFAIYDKAEKEGKLI 69
Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PGK++++E +SGNTG+ +A   A +GYK+I+ MP  MSLE+R +L+ +GA++ILT A +G
Sbjct: 70  PGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALG 129
Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXX 187
           +     + ++++   P +    QF    N   H ETTGPEIWE T   VD F        
Sbjct: 130 MKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGG 189
Query: 188 XXXXXXNFLKKKNPEIKVYGVEPAESAILNGGK 220
                   LKK     ++  VEP ES +L+GGK
Sbjct: 190 TLTGVARALKKMGSHARIVAVEPTESPVLSGGK 222

>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium Length = 322

Iteration: 1
 Score =  160 bits (404), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/212 (43%), Positives = 126/212 (59%), Gaps = 7/212 (3%)
Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           I  D +  IG+TP+V LN I +G   RI AK+E   P  SVK RI  +MI DAE++G++ 
Sbjct: 3   IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 59
Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG   L+E T+GNTGI +A  AAA+GYKL L MP  MS+E+R +L+A GA L+LT    G
Sbjct: 60  PG-VELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118
Query: 128 IDEEFRIVEELLNKIPTSF-NPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
           +    +  EE++   P  +    QF NPANP+ H +TTGPEIWE T GQVD+F       
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178
Query: 187 XXXXXXXNFLK--KKNPEIKVYGVEPAESAIL 216
                   ++K  K   ++    VEP +S ++
Sbjct: 179 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVI 210

>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine Sulfhydrylase Complexed In External Aldimine Linkage With Methionine Length = 322

Iteration: 1
 Score =  157 bits (398), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 7/212 (3%)
Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           I  D +  IG+TP+V LN I +G   RI AK+E   P  SV  RI  +MI DAE++G++ 
Sbjct: 3   IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVACRIGANMIWDAEKRGVLK 59
Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG   L+E T+GNTGI +A  AAA+GYKL L MP  MS+E+R +L+A GA L+LT    G
Sbjct: 60  PG-VELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118
Query: 128 IDEEFRIVEELLNKIPTSF-NPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXX 186
           +    +  EE++   P  +    QF NPANP+ H +TTGPEIWE T GQVD+F       
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178
Query: 187 XXXXXXXNFLK--KKNPEIKVYGVEPAESAIL 216
                   ++K  K   ++    VEP +S ++
Sbjct: 179 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVI 210

>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B Length = 303

Iteration: 1
 Score =  157 bits (397), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 2/207 (0%)
Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           + + IGNTP+V L  +     + +  KLE   P  SV DR A SMI +AE++G I PG  
Sbjct: 4   LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGRIKPGD- 62
Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
           VLIE TSGNTGI +A  AA KGY++ L+MP  MS E+R  ++AYGA+LIL   E G++  
Sbjct: 63  VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXXX 191
             +  E+ N+        QF NP NPK HY TTGPEIW+ T G++  F            
Sbjct: 123 RDLALEMANRGEGKL-LDQFNNPDNPKAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 181
Query: 192 XXNFLKKKNPEIKVYGVEPAESAILNG 218
              F+++++  + + G++P E + + G
Sbjct: 182 VSEFMREQSKPVTIVGLQPEEGSSIPG 208

>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B Length = 303

Iteration: 1
 Score =  156 bits (395), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 2/207 (0%)
Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           + + IGNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE++G I PG  
Sbjct: 4   LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD- 62
Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
           VLIE TSGNTGI +A  AA KGY++ L+MP  MS E+R  ++AYGA+LIL   E G++  
Sbjct: 63  VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXXX 191
             +  E+ N+        QF NP NP  HY TTGPEIW+ T G++  F            
Sbjct: 123 RDLALEMANRGEGKL-LDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 181
Query: 192 XXNFLKKKNPEIKVYGVEPAESAILNG 218
              F+++++  + + G++P E + + G
Sbjct: 182 VSRFMREQSKPVTIVGLQPEEGSSIPG 208

>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From Salmonella Typhimurium Length = 303

Iteration: 1
 Score =  156 bits (395), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 119/209 (56%), Gaps = 2/209 (0%)
Query: 10  NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
           N + + IGNTP+V L  I     + I  KLE   P  SVKDR A SMI +AE++G I PG
Sbjct: 2   NTLEQTIGNTPLVKLQRIGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG 61
Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
             VLIE TSGNTGI +A  AA KGY++ L+MP  MS E+R  ++AYGA+LIL   E G+ 
Sbjct: 62  D-VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGM- 119
Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXX 189
           E  R +   +++        QF NP NP  HY TTGPEIW  T G++  F          
Sbjct: 120 EGARDLALAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTSGRITHFVSSMGTTGTI 179
Query: 190 XXXXNFLKKKNPEIKVYGVEPAESAILNG 218
                FL+++   + + G++P E + + G
Sbjct: 180 TGVSRFLREQEKPVTIVGLQPEEGSSIPG 208

>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O- Acetylserine Sulfhydrylase Length = 303

Iteration: 1
 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/207 (40%), Positives = 119/207 (57%), Gaps = 2/207 (0%)
Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           + + IGNTP+V L  +     + +  KLE   P  SV DR A SMI +AE++G I PG  
Sbjct: 4   LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGEIKPGD- 62
Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
           VLIE TSGNTGI +A  AA KGY++ L+MP  MS E+R  ++AYGA+LIL   E G++  
Sbjct: 63  VLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 122
Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXXX 191
             +  E+ N+        QF NP NP  HY TTGPEIW+ T G++  F            
Sbjct: 123 RDLALEMANRGEGKL-LDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 181
Query: 192 XXNFLKKKNPEIKVYGVEPAESAILNG 218
              F+++++  + + G++P E + + G
Sbjct: 182 VSRFMREQSKPVTIVGLQPEEGSSIPG 208

>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From Drosophila Length = 527

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Query: 3   SEKCAIANDITELIGNTPMVYLNNI--VDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           + +  I  +I E+IG TP+V LNNI   DG +  + AK E + P  SVKDRI + M++DA
Sbjct: 45  AHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDA 104
Query: 61  EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI 120
           EE+GL+ PG T+ IE TSGNTGIG+A   A KGYK I+VMP  MS EK   L+  GA++I
Sbjct: 105 EEQGLLKPGYTI-IEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKII 163
Query: 121 LTNAEMGIDEE---FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVD 177
            T  E   D       + ++L  + P S    Q++N  NP  HY+ T  EI      +VD
Sbjct: 164 RTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVD 223
Query: 178 IFXXXXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAI 215
           +                 +K++ P  ++ GV+P  S +
Sbjct: 224 MIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSIL 261

>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols Length = 363

Iteration: 1
 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 7/214 (3%)
Query: 8   IANDITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
           I  DI + IG+TPMV +N I    G K  + AK E      SVKDRI+  MI+DAE  G 
Sbjct: 33  ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 92
Query: 66  ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
           + PG T+ IE TSGNTGIG+A  AA +GY+ I+VMP  MS EK  +L+A GA+++ T   
Sbjct: 93  LKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 151
Query: 126 MGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
              D       +   L N+IP S    Q++N +NP  HY+TT  EI +   G++D+    
Sbjct: 152 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 211
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAIL 216
                        LK+K P  ++ GV+P E +IL
Sbjct: 212 VGTGGTITGIARKLKEKCPGCRIIGVDP-EGSIL 244

>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique Pyridoxal 5'- Phosphate Dependent Hemeprotein Length = 435

Iteration: 1
 Score =  140 bits (354), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 7/214 (3%)
Query: 8   IANDITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
           I  DI + IG+TPMV +N I    G K  + AK E      SVKDRI+  MI+DAE  G 
Sbjct: 98  ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 157
Query: 66  ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
           + PG T+ IE TSGNTGIG+A  AA +GY+ I+VMP  MS EK  +L+A GA+++ T   
Sbjct: 158 LKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 216
Query: 126 MGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
              D       +   L N+IP S    Q++N +NP  HY+TT  EI +   G++D+    
Sbjct: 217 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 276
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAIL 216
                        LK+K P  ++ GV+P E +IL
Sbjct: 277 VGTGGTITGIARKLKEKCPGCRIIGVDP-EGSIL 309

>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex Found In The Cysteine Biosynthetic Pathway Of Mycobacterium Tuberculosis Length = 325

Iteration: 1
 Score =  133 bits (335), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 9/208 (4%)
Query: 10  NDITELIGNTPMVYLNNIV-------DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
           + + + +GNTP+V L  +        DG   R+ AKLE   P  S+KDR A  MI+ AE 
Sbjct: 7   DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEA 66
Query: 63  KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
            GL+ PG T+L E TSGNTGI +A  A  KGY+LI VMP   S+E+R +L+ YGAQ+I +
Sbjct: 67  DGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFS 125
Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
            AE G +      +EL    P+    +Q+ NPAN  +HY  TGPE+      ++  F   
Sbjct: 126 AAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELL-ADLPEITHFVAG 184
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEP 210
                       FL++    +K+   EP
Sbjct: 185 LGTTGTLMGTGRFLREHVANVKIVAAEP 212

>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The Cysteine Synthase B Length = 323

Iteration: 1
 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Query: 10  NDITELIGNTPMVYLNNIV-------DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
           + + + +GNTP+V L  +        DG   R+ AKLE   P  S+KDR A  MI+ AE 
Sbjct: 5   DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEA 64
Query: 63  KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
            GL+ PG T+L E TSGNTGI +A  A  KGY+LI VMP   S+E+R +L+ YGAQ+I +
Sbjct: 65  DGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFS 123
Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEI 168
            AE G +      +EL    P+    +Q+ NPAN  +HY  TGPE+
Sbjct: 124 AAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPEL 169

>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium Tuberculosis An O-Phosphoserine Dependent Cysteine Synthase Length = 326

Iteration: 1
 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 110/208 (52%), Gaps = 9/208 (4%)
Query: 10  NDITELIGNTPMVYLNNIV-------DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE 62
           + + + +GNTP+V L  +        DG   R+ AKLE   P  S+ DR A  MI+ AE 
Sbjct: 8   DSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIXDRPAVRMIEQAEA 67
Query: 63  KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT 122
            GL+ PG T+L E TSGNTGI +A  A  KGY+LI VMP   S+E+R +L+ YGAQ+I +
Sbjct: 68  DGLLRPGATIL-EPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFS 126
Query: 123 NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFXXX 182
            AE G +      +EL    P+    +Q+ NPAN  +HY  TGPE+      ++  F   
Sbjct: 127 AAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELL-ADLPEITHFVAG 185
Query: 183 XXXXXXXXXXXNFLKKKNPEIKVYGVEP 210
                       FL++    +K+   EP
Sbjct: 186 LGTTGTLMGTGRFLREHVANVKIVAAEP 213

>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From Entamoeba Histolytica In Complex With Cysteine Length = 338

Iteration: 1
 Score =  131 bits (329), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCK----ARIAAKLEMMEPCSSVKDRIAFSM 56
           + S +  I ++I E IG TP+V L+ + +  +     RI  KLE   P SSVKDR+ F++
Sbjct: 5   ISSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNI 64
Query: 57  IKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG 116
           +  A + G + PG  + IE TSGNTGI +    A  GY++ + MP+ MS+E+++I++A+G
Sbjct: 65  VYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFG 123
Query: 117 AQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGPEIWEGTRGQ 175
           A+LILT  + G+      V +++ + P   F  +QF NP N   H+ T   EIWE T G+
Sbjct: 124 AELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGE 182
Query: 176 VDIFXXXXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNG 218
           VDI                 LK+K   IK+  VEP ESA+L G
Sbjct: 183 VDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEG 225

>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From Entamoeba Histolytica At 1.86 A Resolution Length = 343

Iteration: 1
 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCK----ARIAAKLEMMEPCSSVKDRIAFSM 56
           + S +  I ++I E IG TP+V L+ + +  +     RI  KLE   P SSVKDR+ F++
Sbjct: 6   ISSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNI 65
Query: 57  IKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG 116
           +  A + G + PG  + IE TSGNTGI +    A  GY++ + MP+ MS+E+++I++A+G
Sbjct: 66  VYQAIKDGRLKPGMEI-IESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFG 124
Query: 117 AQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGPEIWEGTRGQ 175
           A+LILT  + G+      V +++ + P   F  +QF NP N   H+ T   EIWE T G+
Sbjct: 125 AELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGE 183
Query: 176 VDIFXXXXXXXXXXXXXXNFLKKKNPEIKVYGVEPAESAILNG 218
           VDI                 LK+K   IK+  VEP ESA+L G
Sbjct: 184 VDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEG 226

>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665) From Thermotoga Maritima At 1.80 A Resolution Length = 303

Iteration: 1
 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 127/226 (56%), Gaps = 17/226 (7%)
Query: 1   MGSEKCAIAND--ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK 58
           MGS+K    +   +  LIG+TP+V L++I     +RI  KLE   P  SVKDR A  MI 
Sbjct: 1   MGSDKIHHHHHHMMERLIGSTPIVRLDSI----DSRIFLKLEKNNPGGSVKDRPALFMIL 56
Query: 59  DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQ 118
           DAE++GL+  G   ++E TSGN GI +A   A +G+++IL MP  MS+E+R +L+  GA+
Sbjct: 57  DAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAE 113
Query: 119 LILTNAEMGIDEEFRIVEELLNKIPTSFNPH---QFKNPANPKTHYETTGPEIWEGTRGQ 175
           L+LT  E+G+      VE+ L +I      H   QF+NP N  +H  TTGPEI +    Q
Sbjct: 114 LVLTPGELGMKGA---VEKAL-EISRETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQ 169
Query: 176 VDIFXXXXXXXXXXXXXXNFLKK-KNPEIKVYGVEPAESAILNGGK 220
           +D F                LK      +K+  VEPA+S +L+GG+
Sbjct: 170 IDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQ 215

>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid Into Proteins As Biophysical Probe Length = 291

Iteration: 1
 Score =  130 bits (326), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 15/211 (7%)
Query: 14  ELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVL 73
            LIG+TP+V L++I     +RI  KLE   P  SVKDR A  MI DAE++GL+  G   +
Sbjct: 4   RLIGSTPIVRLDSI----DSRIXLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---I 56
Query: 74  IECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
           +E TSGN GI +A   A +G+++IL MP  MS+E+R +L+  GA+L+LT  E+G+     
Sbjct: 57  VEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGA-- 114
Query: 134 IVEELLNKIPTSFNPH---QFKNPANPKTHYETTGPEIWEGTRGQVDIFXXXXXXXXXXX 190
            VE+ L +I      H   QF+NP N  +H  TTGPEI +    Q+D F           
Sbjct: 115 -VEKAL-EISRETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTIS 172
Query: 191 XXXNFLKK-KNPEIKVYGVEPAESAILNGGK 220
                LK      +K+  VEPA+S +L+GG+
Sbjct: 173 GVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQ 203

>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex Length = 316

Iteration: 1
 Score =  129 bits (323), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           AI  D +  IGNTP+V L +   G    +  K+E   P  SV  RI  +M+  AE+ G +
Sbjct: 2   AIYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVXCRIGANMVWQAEKDGTL 59
Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
           T GK + ++ TSGNTGI +A  AAA+GYK+ L MP  MSLE++ +L   G  L+LT    
Sbjct: 60  TKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 118
Query: 127 GIDEEFRIVEELLNKIPTSF-NPHQFKNPANPKTHYETTGPEIWEGT 172
           G+       EE++   P+ +    QF+NPANP+ H ETTGPEIW+ T
Sbjct: 119 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDT 165

>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Length = 389

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 16/193 (8%)
Query: 34  RIAAKLEMMEPCS-SVKDRIAFSMIKDAE---EKGLITPGKTVLIECTSGNTGIGMACFA 89
           R+  KLE   P S SVKDR A  +I       EKG      +++ + TS N G+ ++  A
Sbjct: 111 RVWLKLEWYNPFSLSVKDRPAVEIISRLSRRVEKG------SLVADATSSNFGVALSAVA 164
Query: 90  AAKGYKLILVMPAFMSLEKRIILQAYGAQLILT-NAEMGIDEEFRIVEELLNKIPTSFNP 148
              GY+  + +P       +++ +  GAQ+I+   A   +    R++++  N+     N 
Sbjct: 165 RLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVN- 223
Query: 149 HQFKNPANPKTHYETTGPEIW-EGTRGQVDI--FXXXXXXXXXXXXXXNFLKKKNPEIKV 205
            QF N AN + H   T  EI+ +  RG + +                  +L+  +P I+ 
Sbjct: 224 -QFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRA 282
Query: 206 YGVEPAESAILNG 218
             V+PA+   + G
Sbjct: 283 VLVQPAQGDSIPG 295

>pdb|1UIM|A Chain A, Crystal Structure Of Threonine Synthase From Thermus Thermophilus Hb8, Orthorhombic Crystal Form Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 3   SEKCAIANDITELIGNTPMVYLNNIVDGCKA--RIAAKLEMMEPCSSVKDRIAFSMIKDA 60
           SEK  +   I+ L G+TP++ L    +  K   R+ AK E + P  S KDR     +  A
Sbjct: 16  SEKTPV---ISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKA 72
Query: 61  EEKGLITPGKTVLIECTS-GNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQ 118
            E G         + C S GNT    A +AA  G   I+V+PA +++L K      +GA+
Sbjct: 73  VEGG------AQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGAR 126
Query: 119 LILTNAEMGIDEEFRIVEELLNKIPT----SFNPHQFKN 153
           ++    E   D+  R+ ++L    P     S NPH+ + 
Sbjct: 127 IV--QVEGNFDDALRLTQKLTEAFPVALVNSVNPHRLEG 163

>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine Sulfhydrylase Complexed With External Schiff Base Of Pyridoxal 5'-Phosphate With O- Phospho-L-Serine Length = 389

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 34  RIAAKLEMMEPCS-SVKDRIAFSMIKDAE---EKGLITPGKTVLIECTSGNTGIGMACFA 89
           R+  KLE   P S SV DR A  +I       EKG      +++ + TS N G+ ++  A
Sbjct: 111 RVWLKLEWYNPFSLSVADRPAVEIISRLSRRVEKG------SLVADATSSNFGVALSAVA 164
Query: 90  AAKGYKLILVMPAFMSLEKRIILQAYGAQLILT-NAEMGIDEEFRIVEELLNKIPTSFNP 148
              GY+  + +P       +++ +  GAQ+I+   A   +    R++++  N+     N 
Sbjct: 165 RLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNEGFVHVN- 223
Query: 149 HQFKNPANPKTHYETTGPEIW-EGTRGQVDI--FXXXXXXXXXXXXXXNFLKKKNPEIKV 205
            QF N AN + H   T  EI+ +  RG + +                  +L+  +P I+ 
Sbjct: 224 -QFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRA 282
Query: 206 YGVEPAESAILNG 218
             V+PA+   + G
Sbjct: 283 VLVQPAQGDSIPG 295

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	221
4aec_A	430	Cysteine synthase, mitochondrial; lyase, cysteine	1e-135
1z7w_A	322	Cysteine synthase; transferase; HET: PLP; 2.20A {A	1e-135
3tbh_A	334	O-acetyl serine sulfhydrylase; cysteine synthase,	1e-133
2q3b_A	313	Cysteine synthase A; pyridoxal-5'-phosphate, sulph	1e-133
1ve1_A	304	O-acetylserine sulfhydrylase; PLP, transferase, ri	1e-126
1y7l_A	316	O-acetylserine sulfhydrylase, O-acetylserine (thio	1e-125
2egu_A	308	Cysteine synthase; O-acetylserine sulfhydrase, str	1e-124
2pqm_A	343	Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8	1e-122
2v03_A	303	Cysteine synthase B; pyridoxal phosphate, cysteine	1e-120
1o58_A	303	O-acetylserine sulfhydrylase; TM0665, structural g	1e-116
3dwg_A	325	Cysteine synthase B; sulfur carrier protein comple	1e-113
3pc3_A	527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	1e-108
1jbq_A	435	B, cystathionine beta-synthase, serine sulfhydrase	1e-107
1wkv_A	389	Cysteine synthase; homodimer, open alpha/beta fold	1e-104
2zsj_A	352	Threonine synthase; PLP dependent enzyme, lyase; H	6e-16
1e5x_A	486	Threonine synthase; threonine biosynthesis, PLP en	7e-16
2d1f_A	360	Threonine synthase; amino acid synthesis, pyridoxa	1e-15
3aey_A	351	Threonine synthase; PLP, pyridoxal phosphate, lyas	5e-15
2rkb_A	318	Serine dehydratase-like; PLP bound enzyme, enzyme	6e-15
1p5j_A	372	L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo	7e-15
1v71_A	323	Serine racemase, hypothetical protein C320.14 in c	2e-14
1ve5_A	311	Threonine deaminase; riken structural genomics/Pro	1e-13
2gn0_A	342	Threonine dehydratase catabolic; TDCB, biodegradat	1e-13
3l6b_A	346	Serine racemase; pyridoxal phosphate, PLP, isomera	2e-13
3iau_A	366	Threonine deaminase; pyridoxal phosphate, amino-ac	1e-11
4d9i_A	398	Diaminopropionate ammonia-lyase; fold type II PLP-	1e-11
1tdj_A	514	Biosynthetic threonine deaminase; allostery, coope	4e-11
3ss7_X	442	D-serine dehydratase; type II fold, ALFA,beta-elim	6e-09

>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana} Length = 430

 Score =  385 bits (992), Expect = e-135
 Identities = 134/220 (60%), Positives = 177/220 (80%)

Query: 2   GSEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE 61
           G +   IA+++++LIG TPMVYLN+I  GC A IAAKLE+MEPC SVKDRI +SM+ DAE
Sbjct: 107 GPDGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAE 166

Query: 62  EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL 121
           +KG I+PGK+VL+E TSGNTGIG+A  AA++GY+LIL MPA MS+E+R++L+A+GA+L+L
Sbjct: 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226

Query: 122 TNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVS 181
           T+   G+    +  EE+L   P ++   QF NPANPK HYETTGPEIW+ T+G+VDIFV+
Sbjct: 227 TDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVA 286

Query: 182 GIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           GIGTGGT++GVG F+K+KNP+ +V GVEP ES IL+GGK 
Sbjct: 287 GIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKP 326

>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A* Length = 322

 Score =  381 bits (982), Expect = e-135
 Identities = 142/214 (66%), Positives = 173/214 (80%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+TELIGNTP+VYLNN+ +GC  R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI 
Sbjct: 5   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+   G
Sbjct: 65  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187
           +       EE+L K P  +   QF+NPANPK HYETTGPEIW+GT G++D FVSGIGTGG
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           T++G G +LK++N  +K+YGVEP ESAIL+GGK 
Sbjct: 185 TITGAGKYLKEQNANVKLYGVEPVESAILSGGKP 218

>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3t4p_A* 3spx_A* 4air_A* Length = 334

 Score =  377 bits (971), Expect = e-133
 Identities = 92/218 (42%), Positives = 141/218 (64%), Gaps = 1/218 (0%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
           +   +A  I +LIG TP +YLN + +  KA++  K+E   P +SVKDR+ F++   AE++
Sbjct: 7   KSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKE 65

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           G + PGK++++E +SGNTG+ +A   A +GYK+I+ MP  MSLE+R +L+ +GA++ILT 
Sbjct: 66  GKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTP 125

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
           A +G+     + ++++   P +    QF    N   H ETTGPEIWE T   VD F++G+
Sbjct: 126 AALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGV 185

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           GTGGT++GV   LKK     ++  VEP ES +L+GGK 
Sbjct: 186 GTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGKP 223

>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A Length = 313

 Score =  376 bits (967), Expect = e-133
 Identities = 107/218 (49%), Positives = 143/218 (65%), Gaps = 1/218 (0%)

Query: 4   EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEK 63
              +IA DIT+LIG TP+V L  + DG  A I AKLE   P +SVKDRI  +M++ AE+ 
Sbjct: 2   SHMSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQA 61

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
           GLI P  T+++E TSGNTGI +A   AA+GY+ +L MP  MSLE+R++L+AYGA+LILT 
Sbjct: 62  GLIKPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTP 120

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGI 183
              G+       EEL       F P QF+NPANP  H  TT  E+W  T G+VDI V+G+
Sbjct: 121 GADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGV 180

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           GTGGT++GV   +K++ P  +   VEPA S +L+GG+ 
Sbjct: 181 GTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQK 218

>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A* Length = 304

 Score =  357 bits (920), Expect = e-126
 Identities = 105/211 (49%), Positives = 146/211 (69%), Gaps = 2/211 (0%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK- 70
           +   IG TP+V L  +V+   A +  KLE + P  S+KDR A+ MIKDAEE+G++ PG  
Sbjct: 3   VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62

Query: 71  TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDE 130
            V++E TSGNTGIG+A  AA++GY+LIL MPA MS E++ +L+A+GA+L+LT+ E  +  
Sbjct: 63  QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLA 122

Query: 131 EFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVS 190
                  L  +   +F P QFKNPAN + HYETTGPE++E   G++D FV G GTGGT++
Sbjct: 123 AREEALRLK-EELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181

Query: 191 GVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           GVG +LK++ P +KV  VEPA S +L+GGK 
Sbjct: 182 GVGRYLKERIPHVKVIAVEPARSNVLSGGKM 212

>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A* Length = 316

 Score =  354 bits (912), Expect = e-125
 Identities = 91/217 (41%), Positives = 131/217 (60%), Gaps = 5/217 (2%)

Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           AI  D +  IGNTP+V L +   G    +  K+E   P  SVK RI  +M+  AE+ G +
Sbjct: 2   AIYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTL 59

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
           T GK  +++ TSGNTGI +A  AAA+GYK+ L MP  MSLE++ +L   G  L+LT    
Sbjct: 60  TKGKE-IVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 118

Query: 127 GIDEEFRIVEELLNKIPTSFN-PHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185
           G+       EE++   P+ +    QF+NPANP+ H ETTGPEIW+ T G+VD+ V+G+GT
Sbjct: 119 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGT 178

Query: 186 GGTVSGVGNFLK-KKNPEIKVYGVEPAESAILNGGKA 221
           GG+++G+   +K     +I    VEP ES +++   A
Sbjct: 179 GGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLA 215

>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus} Length = 308

 Score =  352 bits (907), Expect = e-124
 Identities = 117/214 (54%), Positives = 147/214 (68%), Gaps = 2/214 (0%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
             N ITELIG+TP V LN IVD   A +  KLE M P SSVKDRIA +MI+ AE+ G + 
Sbjct: 4   TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLK 63

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG T ++E TSGNTGIG+A  AAAKGYK +LVMP  MSLE+R +L+AYGA+L+LT    G
Sbjct: 64  PGDT-IVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQG 122

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187
           +       EEL+ +    F P QFKN ANP+ H  TTG EI E    Q+D FV+G+GTGG
Sbjct: 123 MRGAIAKAEELV-REHGYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGG 181

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           T++G G  L++  P IK+Y VEPA+S +L+GGK 
Sbjct: 182 TITGAGKVLREAYPNIKIYAVEPADSPVLSGGKP 215

>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A* Length = 343

 Score =  349 bits (899), Expect = e-122
 Identities = 94/226 (41%), Positives = 136/226 (60%), Gaps = 7/226 (3%)

Query: 1   MGSEKCAIANDITELIGNTPMVYLNNIVDGCK----ARIAAKLEMMEPCSSVKDRIAFSM 56
           + S +  I ++I E IG TP+V L+ + +  +     RI  KLE   P SSVKDR+ F++
Sbjct: 6   ISSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNI 65

Query: 57  IKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG 116
           +  A + G + PG   +IE TSGNTGI +    A  GY++ + MP+ MS+E+++I++A+G
Sbjct: 66  VYQAIKDGRLKPGME-IIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFG 124

Query: 117 AQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGPEIWEGTRGQ 175
           A+LILT  + G+      V +++ + P   F  +QF NP N   H+  T  EIWE T G+
Sbjct: 125 AELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHH-YTANEIWEDTDGE 183

Query: 176 VDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           VDI VS +GT GTV GV   LK+K   IK+  VEP ESA+L G   
Sbjct: 184 VDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGKAK 229

>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A* Length = 303

 Score =  342 bits (879), Expect = e-120
 Identities = 91/211 (43%), Positives = 132/211 (62%), Gaps = 2/211 (0%)

Query: 10  NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
           + + + IGNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE++G I PG
Sbjct: 2   STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG 61

Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
              LIE TSGNTGI +A  AA KGY++ L+MP  MS E+R  ++AYGA+LIL   E G++
Sbjct: 62  DV-LIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGME 120

Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV 189
               +  E+ N+        QF NP NP  HY TTGPEIW+ T G++  FVS +GT GT+
Sbjct: 121 GARDLALEMANRGE-GKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTI 179

Query: 190 SGVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           +GV  F+++++  + + G++P E + + G +
Sbjct: 180 TGVSRFMREQSKPVTIVGLQPEEGSSIPGIR 210

>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A* Length = 303

 Score =  333 bits (857), Expect = e-116
 Identities = 96/224 (42%), Positives = 139/224 (62%), Gaps = 11/224 (4%)

Query: 1   MGSEKCA--IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK 58
           MGS+K      + +  LIG+TP+V L++I     +RI  KLE   P  SVKDR A  MI 
Sbjct: 1   MGSDKIHHHHHHMMERLIGSTPIVRLDSI----DSRIFLKLEKNNPGGSVKDRPALFMIL 56

Query: 59  DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQ 118
           DAE++GL+  G   ++E TSGN GI +A   A +G+++IL MP  MS+E+R +L+  GA+
Sbjct: 57  DAEKRGLLKNG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAE 113

Query: 119 LILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDI 178
           L+LT  E+G+        E+  +   +   +QF+NP N  +H  TTGPEI +    Q+D 
Sbjct: 114 LVLTPGELGMKGAVEKALEISRETG-AHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDA 172

Query: 179 FVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESAILNGGKA 221
           FV+G+GTGGT+SGVG  LK      +K+  VEPA+S +L+GG+ 
Sbjct: 173 FVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQP 216

>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3fgp_A* 3dki_A* 3dwi_A* Length = 325

 Score =  325 bits (836), Expect = e-113
 Identities = 86/215 (40%), Positives = 122/215 (56%), Gaps = 9/215 (4%)

Query: 7   AIANDITELIGNTPMVYLNNIV-------DGCKARIAAKLEMMEPCSSVKDRIAFSMIKD 59
              + + + +GNTP+V L  +        DG   R+ AKLE   P  S+KDR A  MI+ 
Sbjct: 4   TRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQ 63

Query: 60  AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL 119
           AE  GL+ PG T ++E TSGNTGI +A  A  KGY+LI VMP   S+E+R +L+ YGAQ+
Sbjct: 64  AEADGLLRPGAT-ILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQI 122

Query: 120 ILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIF 179
           I + AE G +      +EL    P+    +Q+ NPAN  +HY  TGPE+      ++  F
Sbjct: 123 IFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL-PEITHF 181

Query: 180 VSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
           V+G+GT GT+ G G FL++    +K+   EP    
Sbjct: 182 VAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGE 216

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A* Length = 527

 Score =  320 bits (822), Expect = e-108
 Identities = 95/224 (42%), Positives = 130/224 (58%), Gaps = 11/224 (4%)

Query: 8   IANDITELIGNTPMVYLNNIV--DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
           I  +I E+IG TP+V LNNI   DG +  + AK E + P  SVKDRI + M++DAEE+GL
Sbjct: 50  ITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGL 109

Query: 66  ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
           + PG T +IE TSGNTGIG+A   A KGYK I+VMP  MS EK   L+  GA++I T  E
Sbjct: 110 LKPGYT-IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTE 168

Query: 126 MGIDEE---FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSG 182
              D       + ++L  + P S    Q++N  NP  HY+ T  EI      +VD+ V  
Sbjct: 169 AAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVS 228

Query: 183 IGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAI-----LNGGKA 221
            GT GT+SG+G  +K++ P  ++ GV+P  S +     LN    
Sbjct: 229 AGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILARPAELNKTDV 272

>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A* Length = 435

 Score =  314 bits (806), Expect = e-107
 Identities = 94/224 (41%), Positives = 132/224 (58%), Gaps = 11/224 (4%)

Query: 8   IANDITELIGNTPMVYLNNIV--DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
           I  DI + IG+TPMV +N I    G K  + AK E      SVKDRI+  MI+DAE  G 
Sbjct: 98  ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 157

Query: 66  ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
           + PG T +IE TSGNTGIG+A  AA +GY+ I+VMP  MS EK  +L+A GA+++ T   
Sbjct: 158 LKPGDT-IIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 216

Query: 126 MGIDEE---FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSG 182
              D       +   L N+IP S    Q++N +NP  HY+TT  EI +   G++D+ V+ 
Sbjct: 217 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 276

Query: 183 IGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAI-----LNGGKA 221
           +GTGGT++G+   LK+K P  ++ GV+P  S +     LN  + 
Sbjct: 277 VGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPEELNQTEQ 320

>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1 Length = 389

 Score =  304 bits (780), Expect = e-104
 Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 9/212 (4%)

Query: 11  DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCS-SVKDRIAFSMIKDAEEKGLITPG 69
           D  E    TP+V    +      R+  KLE   P S SVKDR A  +I     +  +  G
Sbjct: 89  DFFERGKPTPLVRSR-LQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKG 145

Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
              + + TS N G+ ++  A   GY+  + +P       +++ +  GAQ+I+        
Sbjct: 146 SL-VADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTV 204

Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRG---QVDIFVSGIGTG 186
                V +   K     + +QF N AN + H   T  EI+  +R     +      +GT 
Sbjct: 205 HLLPRVMKDS-KNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTS 263

Query: 187 GTVSGVGNFLKKKNPEIKVYGVEPAESAILNG 218
           G +S    +L+  +P I+   V+PA+   + G
Sbjct: 264 GHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG 295

>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus} Length = 352

 Score = 74.2 bits (183), Expect = 6e-16
 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 17/182 (9%)

Query: 17  GNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLI 74
           GNTP++  +N+    G K +I  K E + P  S KDR     I  A E G        +I
Sbjct: 29  GNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVI 83

Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
             ++GNT    A +AA  G +  +++P   +++ K      YGA+++        D+   
Sbjct: 84  CASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGT--FDDALN 141

Query: 134 IVEELLNKIPTSFNPHQFKNPANPKTH--YETTGPEIWEGTRGQVDIFVSGIGTGGTVSG 191
           IV ++         P +  N  NP      +T   EI +      D     +G  G ++ 
Sbjct: 142 IVRKIGEN-----FPVEIVNSVNPYRIEGQKTAAFEICDTLGEAPDYHFIPVGNAGNITA 196

Query: 192 VG 193
             
Sbjct: 197 YW 198

>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A* Length = 486

 Score = 74.8 bits (184), Expect = 7e-16
 Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 13/182 (7%)

Query: 17  GNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLI 74
           GN+ + +             +  K   +    S KD     ++        +      + 
Sbjct: 129 GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVG 188

Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
             ++G+T   ++ + A+ G   I+ +PA  +S+ + +   A GA ++  +     D   +
Sbjct: 189 CASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT--DFDGCMK 246

Query: 134 IVEELLNKIPTSFNPHQFKNPANPKTH--YETTGPEIWEGTRGQV-DIFVSGIGTGGTVS 190
           ++ E+  ++P         N  N       +T   EI +    QV D  +   G  G + 
Sbjct: 247 LIREITAELPIYLA-----NSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIY 301

Query: 191 GV 192
             
Sbjct: 302 AF 303

>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis} Length = 360

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 14/180 (7%)

Query: 17  GNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIEC 76
           G TP++   N+       I  K+E + P  S KDR     + DA   G        ++  
Sbjct: 37  GGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCA 91

Query: 77  TSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIV 135
           ++GNT    A +AA  G    +++P   +++ K      +GA++I  +     D+   + 
Sbjct: 92  STGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG--NFDDCLELA 149

Query: 136 EELLNKIPTSFNPHQFKNPANPKTH--YETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVG 193
            ++    PT        N  NP      +T   EI +      D+    +G  G ++   
Sbjct: 150 RKMAADFPTIS----LVNSVNPVRIEGQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYW 205

>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A Length = 351

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 17/182 (9%)

Query: 17  GNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLI 74
           G+TP++ L    +  K   R+ AK E + P  S KDR     +  A E G        + 
Sbjct: 27  GSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVA 81

Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPA-FMSLEKRIILQAYGAQLILTNAEMGIDEEFR 133
             ++GNT    A +AA  G   I+V+PA +++L K      +GA+++        D+  R
Sbjct: 82  CASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG--NFDDALR 139

Query: 134 IVEELLNKIPTSFNPHQFKNPANPKTH--YETTGPEIWEGTRGQVDIFVSGIGTGGTVSG 191
           + ++L         P    N  NP      +T   E+ +            +G  G ++ 
Sbjct: 140 LTQKLTEA-----FPVALVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNITA 194

Query: 192 VG 193
             
Sbjct: 195 HW 196

>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens} Length = 318

 Score = 71.4 bits (176), Expect = 6e-15
 Identities = 43/214 (20%), Positives = 71/214 (33%), Gaps = 30/214 (14%)

Query: 15  LIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK---DAEEKGLITPGKT 71
               TP++    +       +  K E ++P  S K R      +       + L+     
Sbjct: 4   FHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRHLVC---- 59

Query: 72  VLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDE 130
                + GN GI  A +AA K G    +V+P   SL+    LQ  GA++ LT      DE
Sbjct: 60  ----SSGGNAGIAAA-YAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VWDE 112

Query: 131 EFRIVEELLNKIPTSFNPHQFKNPANPKTHYE------TTGPEIWEGTRGQ-VDIFVSGI 183
                +EL  +      P        P  H        +   E+    R     + ++  
Sbjct: 113 ANLRAQELAKRDGWENVP--------PFDHPLIWKGHASLVQELKAVLRTPPGALVLAVG 164

Query: 184 GTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN 217
           G G     V   L+     + +  +E   +   N
Sbjct: 165 GGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFN 198

>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A* Length = 372

 Score = 71.5 bits (176), Expect = 7e-15
 Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 17/204 (8%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK---DAEEKGLITPGKTVLIE 75
           TP+     +       +  K++  +P  S K R      K          +         
Sbjct: 47  TPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCAHFVC-------- 98

Query: 76  CTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRI 134
            ++GN G+  A +AA + G    +V+P          L+  GA   +      +DE F +
Sbjct: 99  SSAGNAGMAAA-YAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFEL 155

Query: 135 VEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGN 194
            + L    P       F +P   + H  +   E+ E    +       +G GG + GV  
Sbjct: 156 AKALAKNNPGWVYIPPFDDPLIWEGH-ASIVKELKETLWEKPGAIALSVGGGGLLCGVVQ 214

Query: 195 FLKK-KNPEIKVYGVEPAESAILN 217
            L++    ++ V  +E   +   +
Sbjct: 215 GLQECGWGDVPVIAMETFGAHSFH 238

>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A* Length = 323

 Score = 69.8 bits (172), Expect = 2e-14
 Identities = 46/213 (21%), Positives = 83/213 (38%), Gaps = 29/213 (13%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK--DAEEK--GLIT 67
           I +    TP++  + +     A +  K E  +   + K R A + +   +  ++  G++T
Sbjct: 20  IKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQRKAGVLT 79

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
                    +SGN    +A  A   G    ++MP      K    + YG Q+I+   +  
Sbjct: 80  --------FSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIM--YDRY 129

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE------TTGPEIWEGTRGQVDIFVS 181
            D+  ++ +E+  +   +  P        P  H        T   E++E   G +D    
Sbjct: 130 KDDREKMAKEISEREGLTIIP--------PYDHPHVLAGQGTAAKELFEEV-GPLDALFV 180

Query: 182 GIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
            +G GG +SG     +   P  +VYGVEP    
Sbjct: 181 CLGGGGLLSGSALAARHFAPNCEVYGVEPEAGN 213

>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1 Length = 311

 Score = 67.5 bits (166), Expect = 1e-13
 Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 38/218 (17%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAE-EKGLITPGK 70
           I      TP++    +      R+  K E ++   S K R A S     E  KGL+    
Sbjct: 14  IAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALENPKGLLA--- 70

Query: 71  TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDE 130
                 +SGN   G+A  A   G K ++VMP   S  K+   +AYGA+++     +    
Sbjct: 71  -----VSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVD--RGVTAKN 123

Query: 131 EFRIVEELLNK-----IPTSFNPHQFKNPANPKTHYE------TTGPEIWE---GTRGQV 176
              +   L  +     I   F+                     T G E+           
Sbjct: 124 REEVARALQEETGYALIH-PFD------------DPLVIAGQGTAGLELLAQAGRMGVFP 170

Query: 177 DIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
              ++ +G GG ++G+   +K  +P   V GVEP  + 
Sbjct: 171 GAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAAD 208

>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A* Length = 346

 Score = 67.2 bits (165), Expect = 2e-13
 Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 42/221 (19%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI-----KDAEEK--G 64
           I + I  TP++  + +       +  K E+ +   S K R A + +        E K   
Sbjct: 19  IRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKA 78

Query: 65  LITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA 124
           ++T         +SGN G  +   A  +G    +V+P      K++ +QAYGA ++    
Sbjct: 79  VVT--------HSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVY--C 128

Query: 125 EMGIDEEFRIVEELLNK-----IPTSFNPHQFKNPANPKTHYE------TTGPEIWEGTR 173
           E   +    + + +  +     +                          T   E+     
Sbjct: 129 EPSDESRENVAKRVTEETEGIMVH-PNQ------------EPAVIAGQGTIALEVLNQV- 174

Query: 174 GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
             VD  V  +G GG ++G+   +K   P +KVY  EP+ + 
Sbjct: 175 PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNAD 215

>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum} Length = 366

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 31/212 (14%)

Query: 14  ELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI----KDAEEKGLITPG 69
           ++   +P+     + D        K E  +   S K R A++M+    ++  +KG+IT  
Sbjct: 56  DVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREELDKGVIT-- 113

Query: 70  KTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI 128
                  ++GN   G+A  A  +      +VMP      K   ++A G  ++L       
Sbjct: 114 ------ASAGNHAQGVA-LAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGKTF-- 164

Query: 129 DEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE------TTGPEIWEGTRGQVDIFVSG 182
           DE      EL  K    +    F +P              T G EI    +    +F+  
Sbjct: 165 DEAQTHALELSEKDGLKY-IPPFDDP-------GVIKGQGTIGTEINRQLKDIHAVFIP- 215

Query: 183 IGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
           +G GG ++GV  F K+  P  K+ GVEP  +A
Sbjct: 216 VGGGGLIAGVATFFKQIAPNTKIIGVEPYGAA 247

>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A* Length = 398

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 34/156 (21%), Positives = 55/156 (35%), Gaps = 14/156 (8%)

Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
           K      T GN G G+A  A   G   ++ MP   + E+   +   GA+ I+T  +M  D
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVT--DMNYD 169

Query: 130 EEFRIVEELLNK-----IPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQ----VDIFV 180
           +  R+  +   +     +  +      K P      Y T   E  E  R        + +
Sbjct: 170 DTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLL 229

Query: 181 SGIGTGGTVSGVGNFLKK--KNPEIKVYGVEPAESA 214
              G G    GV  +L        +    VEP ++ 
Sbjct: 230 -QAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKAD 264

>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2 Length = 514

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 31/212 (14%)

Query: 14  ELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIK--DAEE--KGLITPG 69
           E    TP+  +  +       I  K E  +P  S K R A++M+     E+   G+IT  
Sbjct: 27  EAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVIT-- 84

Query: 70  KTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI 128
                  ++GN   G+A F++A+ G K ++VMP   +  K   ++ +G +++L  A    
Sbjct: 85  ------ASAGNHAQGVA-FSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA--NF 135

Query: 129 DEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE------TTGPEIWEGTRGQVDIFVSG 182
           DE      EL  +   ++    F +P              T   E+ +     +D     
Sbjct: 136 DEAKAKAIELSQQQGFTW-VPPFDHP-------MVIAGQGTLALELLQQD-AHLDRVFVP 186

Query: 183 IGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
           +G GG  +GV   +K+  P+IKV  VE  +SA
Sbjct: 187 VGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA 218

>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A Length = 442

 Score = 54.4 bits (131), Expect = 6e-09
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 69  GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGI 128
            +  +   ++GN G+ +   +A  G+K+ + M A     K+  L+++G  ++    E   
Sbjct: 159 SQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEY--EQDY 216

Query: 129 DEEFRIVEELLNKIPTSFNPH-QFKNPANPKTH---YETTGPEIWEGTRGQVD------- 177
                   +         +P+  F +  N +T    Y   G  +      Q         
Sbjct: 217 GVAVEEGRKAAQS-----DPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNP 271

Query: 178 --IFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESA 214
             +++   G GG   GV   LK      +  +  EP  S 
Sbjct: 272 LFVYL-PCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSP 310

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
3vc3_A	344	Beta-cyanoalnine synthase; beta-cyanoalanine synth	100.0
3tbh_A	334	O-acetyl serine sulfhydrylase; cysteine synthase,	100.0
4aec_A	430	Cysteine synthase, mitochondrial; lyase, cysteine	100.0
1z7w_A	322	Cysteine synthase; transferase; HET: PLP; 2.20A {A	100.0
3dwg_A	325	Cysteine synthase B; sulfur carrier protein comple	100.0
2v03_A	303	Cysteine synthase B; pyridoxal phosphate, cysteine	100.0
2q3b_A	313	Cysteine synthase A; pyridoxal-5'-phosphate, sulph	100.0
2pqm_A	343	Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8	100.0
1y7l_A	316	O-acetylserine sulfhydrylase, O-acetylserine (thio	100.0
1ve1_A	304	O-acetylserine sulfhydrylase; PLP, transferase, ri	100.0
2egu_A	308	Cysteine synthase; O-acetylserine sulfhydrase, str	100.0
1o58_A	303	O-acetylserine sulfhydrylase; TM0665, structural g	100.0
3l6b_A	346	Serine racemase; pyridoxal phosphate, PLP, isomera	100.0
1jbq_A	435	B, cystathionine beta-synthase, serine sulfhydrase	100.0
4h27_A	364	L-serine dehydratase/L-threonine deaminase; PLP de	100.0
3pc3_A	527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	100.0
2gn0_A	342	Threonine dehydratase catabolic; TDCB, biodegradat	100.0
1v71_A	323	Serine racemase, hypothetical protein C320.14 in c	100.0
1ve5_A	311	Threonine deaminase; riken structural genomics/Pro	100.0
1p5j_A	372	L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo	100.0
2rkb_A	318	Serine dehydratase-like; PLP bound enzyme, enzyme	100.0
3aey_A	351	Threonine synthase; PLP, pyridoxal phosphate, lyas	100.0
2d1f_A	360	Threonine synthase; amino acid synthesis, pyridoxa	100.0
2zsj_A	352	Threonine synthase; PLP dependent enzyme, lyase; H	100.0
1tdj_A	514	Biosynthetic threonine deaminase; allostery, coope	100.0
3iau_A	366	Threonine deaminase; pyridoxal phosphate, amino-ac	100.0
1j0a_A	325	1-aminocyclopropane-1-carboxylate deaminase; PLP d	100.0
1f2d_A	341	1-aminocyclopropane-1-carboxylate deaminase; carbo	100.0
4d9b_A	342	D-cysteine desulfhydrase; fold type II PLP-depende	100.0
3ss7_X	442	D-serine dehydratase; type II fold, ALFA,beta-elim	100.0
1wkv_A	389	Cysteine synthase; homodimer, open alpha/beta fold	100.0
4d9i_A	398	Diaminopropionate ammonia-lyase; fold type II PLP-	100.0
1tzj_A	338	ACC deaminase, 1-aminocyclopropane-1-carboxylate d	100.0
1e5x_A	486	Threonine synthase; threonine biosynthesis, PLP en	100.0
1x1q_A	418	Tryptophan synthase beta chain; structural genomic	100.0
1v8z_A	388	Tryptophan synthase beta chain 1; beta+alpha, rike	100.0
1qop_B	396	Tryptophan synthase beta chain; lyase, carbon-oxyg	100.0
2o2e_A	422	Tryptophan synthase beta chain; amino-acid biosynt	100.0
1vb3_A	428	Threonine synthase; PLP-dependent enzyme, lyase; H	100.0
1kl7_A	514	Threonine synthase; threonine synthesis, pyridoxal	100.0
4f4f_A	468	Threonine synthase; structural genomics, niaid, na	100.0
3v7n_A	487	Threonine synthase; ssgcid, structural genomics, s	100.0
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	94.92
1vp8_A	201	Hypothetical protein AF0103; putative pyruvate kin	93.5
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	92.86
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	92.57
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	92.56
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	92.3
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	92.15
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	92.1
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	92.01
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	91.99
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	91.9
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	91.73
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	91.24
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	91.23
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	91.1
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	90.95
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	90.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	90.79
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	90.74
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	90.64
4eye_A	342	Probable oxidoreductase; structural genomics, niai	90.56
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	90.51
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	90.44
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	90.07
3gms_A	340	Putative NADPH:quinone reductase; structural genom	90.04
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	89.9
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	89.85
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	89.85
3c85_A	183	Putative glutathione-regulated potassium-efflux S	89.83
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	89.64
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	89.61
3o74_A	272	Fructose transport system repressor FRUR; dual tra	89.54
3qk7_A	294	Transcriptional regulators; structural genomics, N	89.53
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	89.47
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	89.38
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	89.21
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	89.14
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	89.13
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	89.05
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	88.91
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	88.72
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	88.61
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	88.57
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	88.56
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	88.56
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	88.49
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	88.49
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	88.48
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	88.46
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	88.42
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	88.35
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	88.32
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	88.3
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	88.29
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	88.18
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	88.12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	88.09
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	88.09
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	88.08
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	87.93
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	87.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	87.9
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	87.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	87.81
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	87.76
3hcw_A	295	Maltose operon transcriptional repressor; RNA-bind	87.76
1t57_A	206	Conserved protein MTH1675; structural genomics, FM	87.74
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	87.68
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	87.68
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	87.67
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	87.67
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	87.41
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	87.37
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	87.36
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	87.32
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	87.25
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	87.24
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	87.17
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	87.1
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	87.01
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	86.93
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	86.92
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	86.91
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	86.73
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	86.7
3imf_A	257	Short chain dehydrogenase; structural genomics, in	86.68
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	86.64
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	86.62
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	86.62
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	86.49
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	86.48
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	86.45
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	86.3
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	86.05
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	85.98
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	85.9
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	85.78
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	85.75
3l6u_A	293	ABC-type sugar transport system periplasmic compo;	85.66
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	85.57
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	85.5
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	85.36
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	85.2
3rih_A	293	Short chain dehydrogenase or reductase; structural	85.2
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	85.09
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	85.02
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	84.9
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	84.9
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	84.82
3cxt_A	291	Dehydrogenase with different specificities; rossma	84.79
3tpf_A	307	Otcase, ornithine carbamoyltransferase; structural	84.73
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	84.67
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	84.59
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	84.57
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	84.52
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	84.38
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	84.37
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	84.35
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	84.18
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	84.13
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	83.99
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	83.97
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	83.95
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	83.93
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	83.89
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	83.84
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	83.84
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	83.67
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	83.63
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	83.56
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	83.55
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	83.54
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	83.2
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	83.13
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	82.95
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	82.92
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	82.71
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	82.59
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	82.56
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	82.53
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	82.45
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	82.42
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	82.4
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	81.76
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	81.75
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	81.57
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	81.46
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	81.13
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	81.08
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	81.05
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	81.05
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	81.02
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	80.66
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	80.54
1xkq_A	280	Short-chain reductase family member (5D234); parra	80.47
4ekn_B	306	Aspartate carbamoyltransferase; atcase, aspartate	80.41
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	80.39
1xhl_A	297	Short-chain dehydrogenase/reductase family member	80.35
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	80.13
3k9c_A	289	Transcriptional regulator, LACI family protein; PS	80.08

>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*

Probab=100.00  E-value=7.3e-56  Score=382.18  Aligned_cols=216  Identities=58%  Similarity=0.992  Sum_probs=201.7

Q ss_pred             cchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHH
Q 043209            6 CAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGM   85 (221)
Q Consensus         6 ~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~al   85 (221)
                      ..+++.+.+.+|+|||+++++|++.+|++||+|+|++|||||||||++.+++.+++++|.+.+|+++||++|+||||.|+
T Consensus        23 ~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~al  102 (344)
T 3vc3_A           23 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISM  102 (344)
T ss_dssp             CSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHH
T ss_pred             hhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHH
Confidence            35778899999999999999999999999999999999999999999999999999999999988889999999999999


Q ss_pred             HHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209           86 ACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG  165 (221)
Q Consensus        86 A~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  165 (221)
                      |++|+.+|++|+||||++++..|++.++.+||+|+.++...++.+....+.++..+.++.+|+++|+||.++.+||.|++
T Consensus       103 A~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g  182 (344)
T 3vc3_A          103 AFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTG  182 (344)
T ss_dssp             HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHH
T ss_pred             HHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHH
Confidence            99999999999999999999999999999999999998754455666666677777778999999999999988999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCCC
Q 043209          166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA  221 (221)
Q Consensus       166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~~  221 (221)
                      .||++|+++.+|+||+|+|+||+++|++.++|+.+|++|||+|||++|+.+.++.+
T Consensus       183 ~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~s~~l~~~~~  238 (344)
T 3vc3_A          183 PEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSESNVLNGGKP  238 (344)
T ss_dssp             HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCCC
T ss_pred             HHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCCChhhcCCCC
Confidence            99999998899999999999999999999999999999999999999999988753

>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*

Probab=100.00  E-value=8.3e-54  Score=368.13  Aligned_cols=217  Identities=42%  Similarity=0.772  Sum_probs=202.4

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      ..+..+++++...+++|||+++++| +..|++||+|+|++|||||||||++.+++.+++++|.+.+|.+.||++|+||||
T Consensus         6 ~~i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g   84 (334)
T 3tbh_A            6 DKSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTG   84 (334)
T ss_dssp             CTTTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHH
T ss_pred             hhHHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHH
Confidence            3456688899999999999999999 778899999999999999999999999999999999888886546999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|+||||++.+..|++.++.+||+|+.++...+++++++.+++++++.++++|++||+||.|+.+||.
T Consensus        85 ~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~  164 (334)
T 3tbh_A           85 VSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEE  164 (334)
T ss_dssp             HHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHH
Confidence            99999999999999999999999999999999999999998765588999999999988878999999999998888999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      |++.||++|+++.+|+||+|+|+||+++|++.++|+.+|++|||||||++++++.+|.
T Consensus       165 t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~~~g~  222 (334)
T 3tbh_A          165 TTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTESPVLSGGK  222 (334)
T ss_dssp             THHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTSCTTTTCC
T ss_pred             HHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCchHhhCCC
Confidence            9999999999778999999999999999999999999999999999999999987654

>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}

Probab=100.00  E-value=5.3e-54  Score=378.30  Aligned_cols=217  Identities=61%  Similarity=1.079  Sum_probs=204.6

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      +.+++++++.+.+++|||+++++|++.+|++||+|+|++||+||||||++.+++.+++++|.+.+|.++||++|+||||+
T Consensus       109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~  188 (430)
T 4aec_A          109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGI  188 (430)
T ss_dssp             SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred             cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHH
Confidence            44567899999999999999999999899999999999999999999999999999999999988877899999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      |+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+++++.+.+++++++.++++|++||+||.++.+||.|
T Consensus       189 AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T  268 (430)
T 4aec_A          189 GLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYET  268 (430)
T ss_dssp             HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHT
T ss_pred             HHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHH
Confidence            99999999999999999999999999999999999999986546889999999999987789999999999997779999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      ++.||++|+++++|+||+|+|+||+++|++.++|+.+|++|||||||++++++.+|.
T Consensus       269 ~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s~~l~~g~  325 (430)
T 4aec_A          269 TGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGK  325 (430)
T ss_dssp             HHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCGGGTCC
T ss_pred             HHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCCcHhhCCC
Confidence            999999999778999999999999999999999999999999999999999887764

>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*

Probab=100.00  E-value=1.7e-53  Score=364.66  Aligned_cols=212  Identities=67%  Similarity=1.104  Sum_probs=199.7

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.+++++|.+.|+..+||++|+||||.|+|+
T Consensus         5 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~   84 (322)
T 1z7w_A            5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAF   84 (322)
T ss_dssp             CCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred             hhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHH
Confidence            57889999999999999999988889999999999999999999999999999999988887667999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE  167 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  167 (221)
                      +|+.+|++|+||+|++++..|++.++.+||+|+.++.+.+++++.+.+++++++.++++|++||+|+.++..||.|++.|
T Consensus        85 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~E  164 (322)
T 1z7w_A           85 TAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPE  164 (322)
T ss_dssp             HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred             HHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999875457889999999999887899999999999987799999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      |++|+++++|+||+|+|+||+++|++.+||+.+|++|||+|||++++.+.+|
T Consensus       165 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~~~  216 (322)
T 1z7w_A          165 IWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGG  216 (322)
T ss_dssp             HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTC
T ss_pred             HHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCCccccCC
Confidence            9999976899999999999999999999999999999999999999888765

>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*

Probab=100.00  E-value=9.9e-53  Score=360.25  Aligned_cols=209  Identities=40%  Similarity=0.619  Sum_probs=196.3

Q ss_pred             cchhHHhhcccCCCceeecccccCC-------CCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC
Q 043209            6 CAIANDITELIGNTPMVYLNNIVDG-------CKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTS   78 (221)
Q Consensus         6 ~~~~~~~~~~~~~TPl~~~~~l~~~-------~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~ass   78 (221)
                      +.+++++.+.+++|||+++++|++.       .|.+||+|+|++|||||||||++.+++.++.++|.+.++. +||++|+
T Consensus         3 ~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~~-~vv~aSs   81 (325)
T 3dwg_A            3 MTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPGA-TILEPTS   81 (325)
T ss_dssp             CCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTTC-EEEEECS
T ss_pred             cccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCCC-EEEEeCC
Confidence            4578889999999999999999987       7789999999999999999999999999999999887764 5999999


Q ss_pred             ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHH
Q 043209           79 GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPK  158 (221)
Q Consensus        79 GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~  158 (221)
                      ||||+|+|++|+.+|++|+||+|++.+..|++.++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.+++
T Consensus        82 GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~~  161 (325)
T 3dwg_A           82 GNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTD  161 (325)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHHH
T ss_pred             cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999976568999999999999986699999999999997


Q ss_pred             HHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          159 THYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       159 ~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      +||.|++.||++|++ .+|+||+|+|+||+++|++.++++.+|++|||+|||++++.+
T Consensus       162 ~g~~t~~~Ei~~q~~-~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~  218 (325)
T 3dwg_A          162 SHYCGTGPELLADLP-EITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYGEGV  218 (325)
T ss_dssp             HHHHTHHHHHHHHCT-TCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhcC-CCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCCcch
Confidence            799999999999996 499999999999999999999999999999999999999876

>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*

Probab=100.00  E-value=4.5e-52  Score=353.03  Aligned_cols=206  Identities=44%  Similarity=0.732  Sum_probs=192.5

Q ss_pred             HHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           10 NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        10 ~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      +++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.+++++|.+.++ .+||++|+||||.|+|++|
T Consensus         2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a   80 (303)
T 2v03_A            2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIA   80 (303)
T ss_dssp             CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHH
T ss_pred             cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHH
Confidence            467788999999999999988899999999999999999999999999999999977776 4599999999999999999


Q ss_pred             HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209           90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW  169 (221)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  169 (221)
                      +.+|++|+||+|++++..+++.++.+||+|+.++.+.+++++.+.+++++++.+++ |++||+|+.++++||.|++.||+
T Consensus        81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~  159 (303)
T 2v03_A           81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW  159 (303)
T ss_dssp             HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred             HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence            99999999999999999999999999999999997656899999999999885577 99999999998879999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          170 EGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       170 ~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      +|++.++|+||+|+|+||+++|++.++|+.+|++|||+|||++++++.
T Consensus       160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~~~~~  207 (303)
T 2v03_A          160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIP  207 (303)
T ss_dssp             HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCT
T ss_pred             HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCCcccc
Confidence            999767999999999999999999999999999999999999998875

>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A

Probab=100.00  E-value=6.4e-52  Score=353.50  Aligned_cols=212  Identities=50%  Similarity=0.845  Sum_probs=196.8

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      .+++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+.++. +||++|+||||+|+|
T Consensus         5 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g~-~vv~assGN~g~alA   83 (313)
T 2q3b_A            5 SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDT-IILEPTSGNTGIALA   83 (313)
T ss_dssp             CCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTTC-EEEEECSSHHHHHHH
T ss_pred             chhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHHHHHH
Confidence            4678899999999999999999888899999999999999999999999999999998777764 599999999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++|+.+|++|+||||++++..|++.++.+||+|+.++...+++++.+.+++++++.+..+++++|+||.++++||.|++.
T Consensus        84 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~  163 (313)
T 2q3b_A           84 MVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAE  163 (313)
T ss_dssp             HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999987545889999999999988545889999999999878999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      ||++|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+..+
T Consensus       164 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~~  216 (313)
T 2q3b_A          164 EVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGG  216 (313)
T ss_dssp             HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTSCTTTTC
T ss_pred             HHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCCccccCC
Confidence            99999976799999999999999999999999999999999999999888653

>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*

Probab=100.00  E-value=6e-52  Score=357.80  Aligned_cols=216  Identities=44%  Similarity=0.703  Sum_probs=198.5

Q ss_pred             CccccchhHHhhcccCCCceeecccccC----CCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC
Q 043209            2 GSEKCAIANDITELIGNTPMVYLNNIVD----GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECT   77 (221)
Q Consensus         2 ~~~~~~~~~~~~~~~~~TPl~~~~~l~~----~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~as   77 (221)
                      .++...+++++.+.+++|||+++++|++    ..|++||+|+|++|||||||||++.+++.++.++|.+.++. +||++|
T Consensus         7 ~~~~~~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g~-~vv~aS   85 (343)
T 2pqm_A            7 SSPRKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPGM-EIIEST   85 (343)
T ss_dssp             CCCCCCEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTTC-EEEEEC
T ss_pred             CCCchhHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCCC-EEEEEC
Confidence            3445567889999999999999999988    78899999999999999999999999999999999777764 599999


Q ss_pred             CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe-eecCCCCCCcc
Q 043209           78 SGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPAN  156 (221)
Q Consensus        78 sGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~  156 (221)
                      +||||+|+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+++++.+.+++++++.++. +++++|+|+.+
T Consensus        86 sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n  165 (343)
T 2pqm_A           86 SGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDN  165 (343)
T ss_dssp             SSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHH
T ss_pred             CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhH
Confidence            99999999999999999999999999999999999999999999987545789999999999987555 77899999999


Q ss_pred             HHHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          157 PKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       157 ~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      +.+||.|++ ||++|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+.++
T Consensus       166 ~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~~~~~~~  227 (343)
T 2pqm_A          166 TAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEESAVLEGK  227 (343)
T ss_dssp             HHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCTTTTC
T ss_pred             HHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCCcccccC
Confidence            877999999 99999976799999999999999999999999999999999999999888764

>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*

Probab=100.00  E-value=6e-52  Score=354.10  Aligned_cols=207  Identities=42%  Similarity=0.697  Sum_probs=192.3

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +++++...+++|||+++++| + .|.+||+|+|++|||||||||++.+++.++.++|.+.++ .+||++|+||||.|+|+
T Consensus         3 ~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A~   79 (316)
T 1y7l_A            3 IYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALAY   79 (316)
T ss_dssp             CCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHHH
T ss_pred             chhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHH
Confidence            57788999999999999999 6 889999999999999999999999999999999977766 45999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCe-eecCCCCCCccHHHHHhhHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTS-FNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      +|+.+|++|+||||++++..|++.++.+||+|+.++.+.+++++.+.+++++++.++. +|++||+|+.++++||.|++.
T Consensus        80 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  159 (316)
T 1y7l_A           80 VAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGP  159 (316)
T ss_dssp             HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999987545889999999999987667 889999999999878999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILN  217 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~  217 (221)
                      ||++|++.++|+||+|+|+||+++|++.+|++.+ |++|||+|||++++.+.
T Consensus       160 Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~~  211 (316)
T 1y7l_A          160 EIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVIS  211 (316)
T ss_dssp             HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHHH
T ss_pred             HHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCCcccc
Confidence            9999997669999999999999999999999998 99999999999997654

>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*

Probab=100.00  E-value=2e-51  Score=349.11  Aligned_cols=207  Identities=50%  Similarity=0.827  Sum_probs=191.6

Q ss_pred             hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCC-eEEEeeCCChHHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK-TVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~-~~vv~assGN~~~alA~~a~   90 (221)
                      +.+.+++|||+++++|++..|.+||+|+|++|||||||||++.+++.+++++|.+.++. .+||++|+||||+|+|++|+
T Consensus         3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~assGN~g~a~A~~a~   82 (304)
T 1ve1_A            3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAA   82 (304)
T ss_dssp             GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHHH
T ss_pred             hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCCCccEEEEeCCcHHHHHHHHHHH
Confidence            46779999999999999888999999999999999999999999999999998777664 15999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      .+|++|+||+|++++..|++.++.+||+|+.++.+.+++++.+.+++++++ ++++|+++|+|+.++.+||.|++.||++
T Consensus        83 ~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~~  161 (304)
T 1ve1_A           83 SRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELYE  161 (304)
T ss_dssp             HHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHHH
T ss_pred             HcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999765588999999999888 4789999999999998558999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      |++.++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+.+|
T Consensus       162 q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~~~~~~g  210 (304)
T 1ve1_A          162 ALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGG  210 (304)
T ss_dssp             HTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTC
T ss_pred             HcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCCccccCC
Confidence            9976799999999999999999999999999999999999999888765

>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}

Probab=100.00  E-value=5.8e-52  Score=353.02  Aligned_cols=210  Identities=55%  Similarity=0.842  Sum_probs=176.9

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +++++...+++|||+++++|++..|.+||+|+|++|||||||||++.+++.++.++|.+.++ .+||++|+||||+|+|+
T Consensus         4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A~   82 (308)
T 2egu_A            4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLAM   82 (308)
T ss_dssp             CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHH
Confidence            57788999999999999999988899999999999999999999999999999999877766 45999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE  167 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  167 (221)
                      +|+.+|++|+||||++++..|++.++.+||+|+.++.+.+++++.+.+++++++. +++++++|+|+.++.+||.|++.|
T Consensus        83 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~E  161 (308)
T 2egu_A           83 VAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKE  161 (308)
T ss_dssp             HHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHH
T ss_pred             HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999987545789999999998887 458889999999886799999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      |++|+++++|+||+|+|+||+++|++.++|+.+|++|||+|||++++.+.++
T Consensus       162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~~~~~~~  213 (308)
T 2egu_A          162 IVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADSPVLSGG  213 (308)
T ss_dssp             HHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-------
T ss_pred             HHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCCccccCC
Confidence            9999976799999999999999999999999999999999999999887654

>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*

Probab=100.00  E-value=2.2e-50  Score=342.64  Aligned_cols=200  Identities=46%  Similarity=0.700  Sum_probs=185.8

Q ss_pred             hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      +...+++|||+++++|+    .+||+|+|++|||||||||++.+++.+++++|.+.++   ||++|+||||.|+|++|+.
T Consensus        14 ~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~~---vv~aSsGN~g~a~A~aa~~   86 (303)
T 1o58_A           14 MERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMIGAK   86 (303)
T ss_dssp             HHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTC---EEEECSSHHHHHHHHHHHH
T ss_pred             hhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCCC---EEEECchHHHHHHHHHHHH
Confidence            67889999999998876    5899999999999999999999999999998865544   9999999999999999999


Q ss_pred             cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209           92 KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEG  171 (221)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  171 (221)
                      +|++|+||+|++++..|++.++.+||+|+.++.+.+|+++.+.+++++++. +++|++||+|+.++.+||.|++.||++|
T Consensus        87 ~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  165 (303)
T 1o58_A           87 RGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQ  165 (303)
T ss_dssp             HTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHHHHH
T ss_pred             cCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999987545889999999998887 7888999999999987999999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCCC-cEEEEEeCCCCccCCCC
Q 043209          172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKNPE-IKVYGVEPAESAILNGG  219 (221)
Q Consensus       172 ~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~-~kvigVe~~~s~~~~~~  219 (221)
                      ++..+|+||+|+|+||+++|++.++|+.+|+ +|||+|||++++.+.+|
T Consensus       166 ~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~~~~~~g  214 (303)
T 1o58_A          166 MDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGG  214 (303)
T ss_dssp             TTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTC
T ss_pred             cCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCCccccCC
Confidence            9766999999999999999999999999999 99999999999988765

>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*

Probab=100.00  E-value=7.6e-51  Score=351.26  Aligned_cols=208  Identities=21%  Similarity=0.294  Sum_probs=188.8

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      .++..+++++...+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|.... ..+||++|+||||
T Consensus        10 ~~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~-~~~vv~~SsGNhg   88 (346)
T 3l6b_A           10 ADVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERK-PKAVVTHSSGNHG   88 (346)
T ss_dssp             HHHHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CC-CSCEEEECSSHHH
T ss_pred             HHHHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccC-CCEEEEeCCCHHH
Confidence            356678999999999999999999998889999999999999999999999999999988654323 2459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      +|+|++|+.+|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+++++++. +.+|+++++|+.++. ||.
T Consensus        89 ~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~i~~~~np~~~~-g~~  164 (346)
T 3l6b_A           89 QALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS--DESRENVAKRVTEET-EGIMVHPNQEPAVIA-GQG  164 (346)
T ss_dssp             HHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSS--HHHHHHHHHHHHHHH-TCEECCSSSCHHHHH-HHH
T ss_pred             HHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCChHHHH-HHH
Confidence            9999999999999999999999999999999999999999875  889999999999887 789999999999885 999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      |++.||++|+ +.+|+||+|+|+||+++|++.++|+.+|++|||||||++++++
T Consensus       165 t~~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~~~~~  217 (346)
T 3l6b_A          165 TIALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDC  217 (346)
T ss_dssp             HHHHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHH
T ss_pred             HHHHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCCHHH
Confidence            9999999999 5799999999999999999999999999999999999998643

>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*

Probab=100.00  E-value=2.2e-49  Score=350.27  Aligned_cols=209  Identities=43%  Similarity=0.676  Sum_probs=188.7

Q ss_pred             chhHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIG   84 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~a   84 (221)
                      .+++++...+++|||+++++|++.+|  ++||+|+|++|||||||||++.+++.+++++|.+.++. +||++|+||||+|
T Consensus        97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g~-tVV~aSsGN~G~A  175 (435)
T 1jbq_A           97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGD-TIIEPTSGNTGIG  175 (435)
T ss_dssp             SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTC-EEEEECSSHHHHH
T ss_pred             hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHHHH
Confidence            46778899999999999999988777  69999999999999999999999999999999887764 5999999999999


Q ss_pred             HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhH---HHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209           85 MACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDE---EFRIVEELLNKIPTSFNPHQFKNPANPKTHY  161 (221)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  161 (221)
                      +|++|+.+|++|+||||++++..|++.++.+||+|+.++...+|++   ..+.+++++++.++.+|++||+|+.|+.+||
T Consensus       176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~  255 (435)
T 1jbq_A          176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY  255 (435)
T ss_dssp             HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred             HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence            9999999999999999999999999999999999999986534554   4677888888876789999999999888899


Q ss_pred             hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      .+++.||++|+++++|+||+|+|+||+++|++.+||+..|++|||||||++++.+
T Consensus       256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs~~~  310 (435)
T 1jbq_A          256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILA  310 (435)
T ss_dssp             HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCS
T ss_pred             HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCchhh
Confidence            9999999999976799999999999999999999999999999999999999754

>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*

Probab=100.00  E-value=1.4e-49  Score=345.44  Aligned_cols=200  Identities=20%  Similarity=0.198  Sum_probs=185.2

Q ss_pred             HHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           10 NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        10 ~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      .+....+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|     ..+||++|+||||+|+|++|
T Consensus        38 ~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g-----~~~vv~aSsGN~g~alA~aa  112 (364)
T 4h27_A           38 MSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQG-----CAHFVCSSSGNAGMAAAYAA  112 (364)
T ss_dssp             ---CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTT-----CCEEEECCSSHHHHHHHHHH
T ss_pred             hhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcC-----CCEEEEeCCChHHHHHHHHH
Confidence            4456778999999999999888999999999999999999999999999999887     45699999999999999999


Q ss_pred             HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209           90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW  169 (221)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  169 (221)
                      +.+|++|+||||++.+..+++.++.+||+|+.++.+  ++++.+.+++++++.++++|++||+|+.+++ ||.|++.||+
T Consensus       113 ~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~--~~~a~~~a~~l~~~~~~~~~~~~~~np~~~~-G~~t~~~Ei~  189 (364)
T 4h27_A          113 RQLGVPATIVVPGTTPALTIERLKNEGATVKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLIWE-GHASIVKELK  189 (364)
T ss_dssp             HHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSS--TTHHHHHHHHHHHHSTTEEEECSSCSHHHHH-HHTHHHHHHH
T ss_pred             HHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhCCCeEEeCCCCCHHHHH-HHHHHHHHHH
Confidence            999999999999999999999999999999999874  8899999999999877899999999999997 8999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCC
Q 043209          170 EGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILN  217 (221)
Q Consensus       170 ~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~  217 (221)
                      +|++..+|+||+|+|+||+++|++.++|+.+ |+++||+|||++++++.
T Consensus       190 ~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~~~~~~  238 (364)
T 4h27_A          190 ETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFH  238 (364)
T ss_dssp             HHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHH
T ss_pred             HHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCCChHHH
Confidence            9997679999999999999999999999886 88999999999998764

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*

Probab=100.00  E-value=6.3e-49  Score=356.23  Aligned_cols=211  Identities=43%  Similarity=0.652  Sum_probs=195.0

Q ss_pred             ccchhHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            5 KCAIANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         5 ~~~~~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      +.++++.+.+.+++|||+++++|++.+|  ++||+|+|++|||||||+|++.+++.+++++|.+.+|. +||++|+||||
T Consensus        47 ~~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g~-~vv~~ssGN~g  125 (527)
T 3pc3_A           47 RQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGY-TIIEPTSGNTG  125 (527)
T ss_dssp             CCSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTTC-EEEEECSSHHH
T ss_pred             hhhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCCC-EEEEeCCCHHH
Confidence            4567888999999999999999988777  79999999999999999999999999999999888875 49999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCCCCCccHHH
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKT  159 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~  159 (221)
                      +|+|++|+.+|++|+||||++++..|++.++.+||+|+.++...+|+   .+.+.+++++++.++.+|++||+||.++.+
T Consensus       126 ~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~  205 (527)
T 3pc3_A          126 IGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLA  205 (527)
T ss_dssp             HHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHH
T ss_pred             HHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHH
Confidence            99999999999999999999999999999999999999998754454   367888999988877899999999998888


Q ss_pred             HHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          160 HYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      ||.+++.||++|+++.+|+||+|+|+||+++|++.++++.+|++|||||||++++.+
T Consensus       206 g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~~~~  262 (527)
T 3pc3_A          206 HYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGSILA  262 (527)
T ss_dssp             HHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTCCCS
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCcccc
Confidence            999999999999977899999999999999999999999999999999999999754

>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*

Probab=100.00  E-value=3e-50  Score=344.63  Aligned_cols=204  Identities=21%  Similarity=0.284  Sum_probs=186.5

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHH-cCCCCCCCeEEEeeCCChH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEE-KGLITPGKTVLIECTSGNT   81 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~-~g~~~~g~~~vv~assGN~   81 (221)
                      +++..+++++...+++|||+++++|++..|++||+|+|++||+||||||++.+++.++.+ ++     ..+||++|+|||
T Consensus        11 ~~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~~-----~~~vv~~ssGN~   85 (323)
T 1v71_A           11 DDVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQR-----KAGVLTFSSGNH   85 (323)
T ss_dssp             HHHHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHH-----HHCEEECCSSHH
T ss_pred             HHHHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhcC-----CCeEEEeCCCcH
Confidence            345678889999999999999999988888999999999999999999999999986543 22     345999999999


Q ss_pred             HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209           82 GIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHY  161 (221)
Q Consensus        82 ~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  161 (221)
                      |+|+|++|+.+|++|++|||++.+..+++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.++. ||
T Consensus        86 g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~~~-g~  161 (323)
T 1v71_A           86 AQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHVLA-GQ  161 (323)
T ss_dssp             HHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHHHH-HH
T ss_pred             HHHHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcchhh-hH
Confidence            99999999999999999999999999999999999999999886  678889999998886 688899999999986 99


Q ss_pred             hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      .|++.||++|++ .+|+||+|+|||||++|++.++|+.+|++|||+|||++++++
T Consensus       162 ~t~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~~~~~  215 (323)
T 1v71_A          162 GTAAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDG  215 (323)
T ss_dssp             THHHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHH
T ss_pred             hHHHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCCCchH
Confidence            999999999995 799999999999999999999999999999999999998755

>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1

Probab=100.00  E-value=4.7e-50  Score=341.64  Aligned_cols=203  Identities=24%  Similarity=0.274  Sum_probs=186.5

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      +++..+++++.+.+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.  +     ..+||++|+||||
T Consensus         5 ~~i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~-----~~~vv~~ssGN~g   77 (311)
T 1ve5_A            5 QDLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N-----PKGLLAVSSGNHA   77 (311)
T ss_dssp             HHHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S-----CCCEEEECSSHHH
T ss_pred             HHHHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C-----CCeEEEECCCcHH
Confidence            45677899999999999999999998888899999999999999999999999999876  2     3459999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      .|+|++|+.+|++|++|||++++..|++.++.+||+|+.++.+  ++++.+.+++++++. +++|++||+|+.+++ ||.
T Consensus        78 ~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~-g~~  153 (311)
T 1ve5_A           78 QGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLVIA-GQG  153 (311)
T ss_dssp             HHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHHHH-HHH
T ss_pred             HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCCCCCcchhh-hcc
Confidence            9999999999999999999998899999999999999999876  788999999998886 789999999999996 999


Q ss_pred             hHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          163 TTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       163 t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      |++.||++|++   +++|+||+|+|+||+++|++.++|+.+|++|||+|||++++++
T Consensus       154 t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~~~~~  210 (311)
T 1ve5_A          154 TAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDA  210 (311)
T ss_dssp             HHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHH
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCCChHH
Confidence            99999999995   6799999999999999999999999999999999999998765

>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*

Probab=100.00  E-value=3.6e-49  Score=343.65  Aligned_cols=202  Identities=19%  Similarity=0.187  Sum_probs=184.9

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      .++++...+++|||+++++|++..|++||+|+|++|||||||||++.+++.++.++|     ..+||++|+||||+|+|+
T Consensus        36 ~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g-----~~~vv~aSsGN~g~alA~  110 (372)
T 1p5j_A           36 FMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQG-----CAHFVCSSAGNAGMAAAY  110 (372)
T ss_dssp             ----CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTT-----CCEEEECCSSHHHHHHHH
T ss_pred             hcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcC-----CCEEEEeCCCHHHHHHHH
Confidence            344566789999999999998888899999999999999999999999999998876     456999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE  167 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  167 (221)
                      +|+.+|++|+||||++++..|++.++.+||+|+.++.+  ++++.+.+++++++.++++|++||+|+.+++ ||.|++.|
T Consensus       111 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~a~~~a~~l~~~~~~~~~v~~~~n~~~~~-G~~t~~~E  187 (372)
T 1p5j_A          111 AARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLIWE-GHASIVKE  187 (372)
T ss_dssp             HHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHHSTTEEECCSSCCHHHHH-HHTHHHHH
T ss_pred             HHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhcCCcEEeCCCCCHHHHh-hHHHHHHH
Confidence            99999999999999999999999999999999999874  8999999999998866899999999999997 88999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCC
Q 043209          168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILN  217 (221)
Q Consensus       168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~  217 (221)
                      |++|++..+|+||+|+|+||+++|++.+||+.+ |++|||+|||++++++.
T Consensus       188 i~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~~~~~~  238 (372)
T 1p5j_A          188 LKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFH  238 (372)
T ss_dssp             HHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHH
T ss_pred             HHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCCChHHH
Confidence            999996669999999999999999999999986 89999999999988764

>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.9e-49  Score=335.08  Aligned_cols=194  Identities=24%  Similarity=0.212  Sum_probs=181.0

Q ss_pred             cccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcC
Q 043209           14 ELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKG   93 (221)
Q Consensus        14 ~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g   93 (221)
                      +.+.+|||+++++|++..|++||+|+|++|||||||||++.+++.++.++|     ..+||++|+||||.|+|++|+.+|
T Consensus         3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g-----~~~vv~~ssGN~g~alA~~a~~~G   77 (318)
T 2rkb_A            3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKG-----CRHLVCSSGGNAGIAAAYAARKLG   77 (318)
T ss_dssp             CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CCEEEECCCSHHHHHHHHHHHHHT
T ss_pred             CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcC-----CCEEEEECCchHHHHHHHHHHHcC
Confidence            456899999999998888889999999999999999999999999998876     456999999999999999999999


Q ss_pred             CeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhC
Q 043209           94 YKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTR  173 (221)
Q Consensus        94 ~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~  173 (221)
                      ++|++|||++.+..+++.++.+||+|+.++.+  ++++.+.+++++++. +++|++|++|+.+++ ||.|++.||++|++
T Consensus        78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~-g~~t~~~Ei~~q~~  153 (318)
T 2rkb_A           78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGKV--WDEANLRAQELAKRD-GWENVPPFDHPLIWK-GHASLVQELKAVLR  153 (318)
T ss_dssp             CCEEEEECTTCCHHHHHHHHHTTCEEEECCSS--HHHHHHHHHHHHHST-TEEECCSSCSHHHHH-HHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCCcHHHHHHHHhcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEeCCCCChhhcc-chhHHHHHHHHhcC
Confidence            99999999999999999999999999999875  899999999998886 899999999999997 88999999999997


Q ss_pred             CCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccC
Q 043209          174 GQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAIL  216 (221)
Q Consensus       174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~  216 (221)
                      ..+|+||+|+|+||+++|++.+|++.+ |++|||+|||++++++
T Consensus       154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~~~~  197 (318)
T 2rkb_A          154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCF  197 (318)
T ss_dssp             SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETTBCHH
T ss_pred             CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCCChHH
Confidence            679999999999999999999999986 8899999999998765

>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A

Probab=100.00  E-value=2.8e-48  Score=335.90  Aligned_cols=199  Identities=24%  Similarity=0.271  Sum_probs=183.8

Q ss_pred             hHHhhcccCCCceeec--ccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            9 ANDITELIGNTPMVYL--NNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~--~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      .+++.+.+++|||+++  ++|++..|++||+|+|++|||||||||++.+++.++.++|     ..+||++|+||||.|+|
T Consensus        19 ~~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g-----~~~vv~~SsGN~g~alA   93 (351)
T 3aey_A           19 TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGG-----AQAVACASTGNTAASAA   93 (351)
T ss_dssp             SCCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CSEEEESCSSHHHHHHH
T ss_pred             CCceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcC-----CCEEEEeCCCHHHHHHH
Confidence            3568899999999999  8998888999999999999999999999999999999887     45699999999999999


Q ss_pred             HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209           87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG  165 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  165 (221)
                      ++|+.+|++|++|+|++ .+..|+++++.+||+|+.++.+  ++++.+.+++++++. +.+|+++ +|+.+++ ||.|++
T Consensus        94 ~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~~-g~~t~~  168 (351)
T 3aey_A           94 AYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALVNS-VNPHRLE-GQKTLA  168 (351)
T ss_dssp             HHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SEEECST-TCHHHHH-HHHHHH
T ss_pred             HHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCC-CCcccee-eeeeHH
Confidence            99999999999999998 9999999999999999999985  899999999999887 5888987 8999986 999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCC
Q 043209          166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILN  217 (221)
Q Consensus       166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~  217 (221)
                      .||++|++..+|+||+|+|+||+++|++.+|++.+|      .+|||+|||++++++.
T Consensus       169 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~  226 (351)
T 3aey_A          169 FEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLV  226 (351)
T ss_dssp             HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEEGGGCHHH
T ss_pred             HHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEecCCCChhh
Confidence            999999976699999999999999999999998754      7999999999987654

>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2e-48  Score=337.82  Aligned_cols=201  Identities=22%  Similarity=0.284  Sum_probs=184.5

Q ss_pred             hHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF   88 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~   88 (221)
                      .+++.+.+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|     ..+||++|+||||.|+|++
T Consensus        29 ~~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g-----~~~vv~aSsGN~g~alA~~  103 (360)
T 2d1f_A           29 WTPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHG-----QRAVLCASTGNTSASAAAY  103 (360)
T ss_dssp             CCCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CSEEEECCSSHHHHHHHHH
T ss_pred             CCccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCC-----CCEEEEeCCcHHHHHHHHH
Confidence            35678899999999999998888899999999999999999999999999999887     4569999999999999999


Q ss_pred             HHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHH
Q 043209           89 AAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPE  167 (221)
Q Consensus        89 a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  167 (221)
                      |+.+|++|+||+|++ .+..|+++++.+||+|+.++.+  ++++.+.+++++++.++.+|+++ +|+.+++ ||.|++.|
T Consensus       104 a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~~~~~~i~~-~n~~~~~-g~~t~~~E  179 (360)
T 2d1f_A          104 AARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGN--FDDCLELARKMAADFPTISLVNS-VNPVRIE-GQKTAAFE  179 (360)
T ss_dssp             HHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSC--HHHHHHHHHHHHHHCTTEEECST-TCHHHHH-HHTHHHHH
T ss_pred             HHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCeEEcCC-CChhhhh-hHHHHHHH
Confidence            999999999999998 9999999999999999999985  89999999999988855888887 8999986 99999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCCC
Q 043209          168 IWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILNG  218 (221)
Q Consensus       168 i~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~~  218 (221)
                      |++|++..+|+||+|+|+||+++|++.+|++.++      .+|||+|||++++++..
T Consensus       180 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~~  236 (360)
T 2d1f_A          180 IVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQAAGAAPLVL  236 (360)
T ss_dssp             HHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHHH
T ss_pred             HHHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEecCCCCHHhc
Confidence            9999976699999999999999999999998753      69999999999876643

>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}

Probab=100.00  E-value=3.3e-48  Score=335.56  Aligned_cols=199  Identities=23%  Similarity=0.286  Sum_probs=183.5

Q ss_pred             hHHhhcccCCCceeecccccCCCCCe--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDGCKAR--IAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~~g~~--i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      .+++.+.+++|||+++++|++..|++  ||+|+|++|||||||||++.+++.++.++|     ..+||++|+||||.|+|
T Consensus        21 ~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g-----~~~vv~~SsGN~g~alA   95 (352)
T 2zsj_A           21 TPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAG-----KRAVICASTGNTSASAA   95 (352)
T ss_dssp             CCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTT-----CCEEEECCSSHHHHHHH
T ss_pred             CCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcC-----CCEEEEeCCchHHHHHH
Confidence            45688999999999999998878888  999999999999999999999999999888     45699999999999999


Q ss_pred             HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209           87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG  165 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  165 (221)
                      ++|+.+|++|++|+|++ .+..|++.++.+||+|+.++.+  ++++.+.+++++++. +.+|+++ +|+.+++ ||.|++
T Consensus        96 ~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~~~-g~~t~~  170 (352)
T 2zsj_A           96 AYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGT--FDDALNIVRKIGENF-PVEIVNS-VNPYRIE-GQKTAA  170 (352)
T ss_dssp             HHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSC--HHHHHHHHHHHHHHS-SEEECST-TCTHHHH-HHTHHH
T ss_pred             HHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHHc-CcEECCC-CCcchhh-hHhHHH
Confidence            99999999999999997 9999999999999999999985  899999999999887 5888887 8999986 999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CcEEEEEeCCCCccCC
Q 043209          166 PEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP------EIKVYGVEPAESAILN  217 (221)
Q Consensus       166 ~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~------~~kvigVe~~~s~~~~  217 (221)
                      .||++|++..+|+||+|+|+||+++|++.+|++.++      .+|||+|||++++++.
T Consensus       171 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~~~~~~~~  228 (352)
T 2zsj_A          171 FEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIV  228 (352)
T ss_dssp             HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEETTBCHHH
T ss_pred             HHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEecCCCcHHh
Confidence            999999976699999999999999999999998754      6999999999987654

>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2

Probab=100.00  E-value=2.5e-48  Score=348.38  Aligned_cols=198  Identities=26%  Similarity=0.316  Sum_probs=184.1

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ++...+++|||+++++|++..|++||+|+|++|||||||||++.+++..+.+++.    ..+||++|+||||.++|++|+
T Consensus        24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~   99 (514)
T 1tdj_A           24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA   99 (514)
T ss_dssp             CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred             hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence            5778899999999999998899999999999999999999999999998765432    345999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      ++|++|+||||.+++..|++.++.+||+|+.++.+  |+++.+.+++++++. +++|++||+|+.++. |+.|++.||++
T Consensus       100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~~--~dda~~~a~ela~e~-g~~~v~pfdnp~~ia-GqgTig~EI~e  175 (514)
T 1tdj_A          100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN--FDEAKAKAIELSQQQ-GFTWVPPFDHPMVIA-GQGTLALELLQ  175 (514)
T ss_dssp             HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSS--HHHHHHHHHHHHHHH-CCEECCSSCCHHHHH-HHHHHHHHHHH
T ss_pred             HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEeeCCCCCHHHHH-HHHHHHHHHHH
Confidence            99999999999999999999999999999999864  999999999999887 789999999999985 99999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |++. +|+||+|+|+||+++|++.++|+.+|++|||||||+++++|.
T Consensus       176 Ql~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~a~~l~  221 (514)
T 1tdj_A          176 QDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLK  221 (514)
T ss_dssp             HCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHH
T ss_pred             HCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccCChhHH
Confidence            9954 999999999999999999999999999999999999988775

>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}

Probab=100.00  E-value=3.8e-48  Score=336.73  Aligned_cols=198  Identities=24%  Similarity=0.300  Sum_probs=182.8

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ++...+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++.+++.    ..+||++|+||||+|+|++|+
T Consensus        53 ~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa~  128 (366)
T 3iau_A           53 PVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAGQ  128 (366)
T ss_dssp             CGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHHH
T ss_pred             HHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHH
Confidence            4678889999999999998889999999999999999999999999987643321    345999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      ++|++|++|+|++.+..++++++.+||+|+.++.  +|+++++.+++++++. +++|+++|+|+.++. ||.|++.||++
T Consensus       129 ~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~i~-g~~t~~~Ei~~  204 (366)
T 3iau_A          129 RLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGVIK-GQGTIGTEINR  204 (366)
T ss_dssp             HTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHHHH-HHHHHHHHHHH
T ss_pred             HhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHHHH-HHHHHHHHHHH
Confidence            9999999999999999999999999999999986  4999999999999887 899999999999885 99999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |+ +.+|+||+|+|+||+++|++.++|+.+|++||++|||.+++++.
T Consensus       205 q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~~~l~  250 (366)
T 3iau_A          205 QL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMT  250 (366)
T ss_dssp             HC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGGCHHH
T ss_pred             hc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCChHHH
Confidence            99 78999999999999999999999999999999999999987664

>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*

Probab=100.00  E-value=3.9e-47  Score=325.54  Aligned_cols=205  Identities=22%  Similarity=0.198  Sum_probs=184.3

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCChHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEP--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIEC--TSGNTG   82 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~a--ssGN~~   82 (221)
                      +.++++.+.+++|||+++++|++..|++||+|+|++||  +||||||.+.+++.+++++|.     .+||++  |+||||
T Consensus        10 ~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN~g   84 (325)
T 1j0a_A           10 AKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSNHA   84 (325)
T ss_dssp             TTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCHHH
T ss_pred             ccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchHHH
Confidence            46678899999999999999988788999999999999  999999999999999999984     458886  999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHhhCCCee-ecCCCCCCccH
Q 043209           83 IGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAEMGI---DEEFRIVEELLNKIPTSF-NPHQFKNPANP  157 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~~~~---~~~~~~a~~~~~~~~~~~-~~~~~~n~~~~  157 (221)
                      +|+|++|+.+|++|++|||++. +..|++.++.+||+|+.++...+.   +++.+.+++++++.+..| +..+++|+.++
T Consensus        85 ~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~~  164 (325)
T 1j0a_A           85 FVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGT  164 (325)
T ss_dssp             HHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHHH
T ss_pred             HHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHHH
Confidence            9999999999999999999999 999999999999999999986332   267888889988774433 45677899888


Q ss_pred             HHHHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          158 KTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       158 ~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      + ||.|++.||++|++..+|+||+|+|||||++|++.++++.+|++|||||||++++.+.
T Consensus       165 ~-g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~~~~~~  223 (325)
T 1j0a_A          165 L-GYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEVM  223 (325)
T ss_dssp             T-HHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSSH
T ss_pred             H-HHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence            6 8999999999999768999999999999999999999999999999999999998764

>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*

Probab=100.00  E-value=2.1e-47  Score=329.13  Aligned_cols=205  Identities=17%  Similarity=0.134  Sum_probs=182.5

Q ss_pred             chhHHhhcccCCCceeecccccCCC-C-CeEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGC-K-ARIAAKLEMME-P--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIE--CTSG   79 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~--assG   79 (221)
                      +.++++...+++|||+++++|++.+ | .+||+|+|++| |  +||||+|++.+++.++.++|.     ++||+  +|+|
T Consensus         4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ssG   78 (341)
T 1f2d_A            4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQS   78 (341)
T ss_dssp             TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETTC
T ss_pred             ccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcch
Confidence            3466788999999999999998887 7 89999999998 9  999999999999999998884     46999  9999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCCCC-----H------HHHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHhhCCCe
Q 043209           80 NTGIGMACFAAAKGYKLILVMPAFMS-----L------EKRIILQAYGAQLILTNAEMGI---DEEFRIVEELLNKIPTS  145 (221)
Q Consensus        80 N~~~alA~~a~~~g~~~~ivvp~~~~-----~------~~~~~l~~~Ga~V~~v~~~~~~---~~~~~~a~~~~~~~~~~  145 (221)
                      |||+|+|++|+.+|++|++|||.+.+     .      .|++.++.+||+|+.++...+.   +++.+.+++++++.+..
T Consensus        79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~  158 (341)
T 1f2d_A           79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKP  158 (341)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcE
Confidence            99999999999999999999999877     3      3999999999999999876322   36778888888886434


Q ss_pred             e-ecCC-CCCCccHHHHHhhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          146 F-NPHQ-FKNPANPKTHYETTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       146 ~-~~~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      + ++++ |+||.+++ ||.|++.||++|++   ..+|+||+|+|||||++|++.+|++.+|++|||||||++++.+.
T Consensus       159 ~~i~~~~~~np~~~~-G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~~~~~~~  234 (341)
T 1f2d_A          159 YPIPAGCSEHKYGGL-GFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTSEKT  234 (341)
T ss_dssp             EEECGGGTTSTTTTT-HHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCHHHH
T ss_pred             EEeCCCcCCCCccHH-HHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEecCchHHH
Confidence            4 4578 99999997 89999999999995   47999999999999999999999999999999999999997653

>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*

Probab=100.00  E-value=2.1e-46  Score=323.02  Aligned_cols=207  Identities=18%  Similarity=0.196  Sum_probs=179.8

Q ss_pred             ccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCh
Q 043209            5 KCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEP--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIECT--SGN   80 (221)
Q Consensus         5 ~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~as--sGN   80 (221)
                      ....++++...+++|||+++++|++.+|++||+|+|++||  +||||+|++.+++.+++++|.     ++||++|  +||
T Consensus        19 ~~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN   93 (342)
T 4d9b_A           19 HLTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQSN   93 (342)
T ss_dssp             GGGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTCH
T ss_pred             hhccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcccH
Confidence            4567788999999999999999988888999999999999  999999999999999999884     5588886  799


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCCCCH--------HHHHHHHHcCCEEEEeCCCCChhHHH-HHHHHHHhhCCCeeec-CC
Q 043209           81 TGIGMACFAAAKGYKLILVMPAFMSL--------EKRIILQAYGAQLILTNAEMGIDEEF-RIVEELLNKIPTSFNP-HQ  150 (221)
Q Consensus        81 ~~~alA~~a~~~g~~~~ivvp~~~~~--------~~~~~l~~~Ga~V~~v~~~~~~~~~~-~~a~~~~~~~~~~~~~-~~  150 (221)
                      ||+|+|++|+.+|++|++|||++.+.        .|++.++.+||+|+.++...+++++. +.++++.++.+..|++ .+
T Consensus        94 ~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~  173 (342)
T 4d9b_A           94 HVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVG  173 (342)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred             HHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCC
Confidence            99999999999999999999998763        58999999999999998864455555 4567777766334433 45


Q ss_pred             CCCCccHHHHHhhHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          151 FKNPANPKTHYETTGPEIWEGTR--GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       151 ~~n~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      +.|+.+++ ||.|++.||++|++  ..+|+||+|+|||||++|++.++|+.+|++|||||||++++.+.
T Consensus       174 ~~n~~~~~-G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~~~~~~  241 (342)
T 4d9b_A          174 GSSALGAM-GYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSRSVAEQ  241 (342)
T ss_dssp             GCSHHHHH-HHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSSCHHHH
T ss_pred             CCChHHHH-HHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecCcHHHH
Confidence            56777764 99999999999996  47999999999999999999999999999999999999997653

>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A

Probab=100.00  E-value=4.5e-46  Score=330.58  Aligned_cols=201  Identities=19%  Similarity=0.207  Sum_probs=179.9

Q ss_pred             hcccCCCceeeccccc----CCC----CCeEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC--------
Q 043209           13 TELIGNTPMVYLNNIV----DGC----KARIAAKLEMMEP-CSSVKDRIAFSMIKD-----AEEKGLITPGK--------   70 (221)
Q Consensus        13 ~~~~~~TPl~~~~~l~----~~~----g~~i~~K~E~~~p-tGs~K~R~a~~~~~~-----a~~~g~~~~g~--------   70 (221)
                      +.++++|||+++++|+    +.+    +++||+|+|++|| |||||+|++.+++..     ++++|.+.+|.        
T Consensus        73 ~~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~  152 (442)
T 3ss7_X           73 TGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSP  152 (442)
T ss_dssp             GTTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSH
T ss_pred             cCCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhh
Confidence            3456799999999876    554    4799999999999 999999999999986     78899887765        


Q ss_pred             --------eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209           71 --------TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        71 --------~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~  142 (221)
                              .+|+++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+.++.+  |+++.+.+++++++.
T Consensus       153 ~~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~--~~~a~~~a~~~a~~~  230 (442)
T 3ss7_X          153 EFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQD--YGVAVEEGRKAAQSD  230 (442)
T ss_dssp             HHHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSC--HHHHHHHHHHHHHTC
T ss_pred             hhhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhC
Confidence                    4799999999999999999999999999999999999999999999999999985  999999999999887


Q ss_pred             CCeeecCCCCCCccHHHHHhhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCC
Q 043209          143 PTSFNPHQFKNPANPKTHYETTGPEIWEGTRG--------QVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAES  213 (221)
Q Consensus       143 ~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s  213 (221)
                      ++++|++++ |+.++..||.|++.||++|++.        .||+||+|+|+||+++|++.+||+. +|++|||||||+++
T Consensus       231 ~~~~~i~~~-n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~~~  309 (442)
T 3ss7_X          231 PNCFFIDDE-NSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHS  309 (442)
T ss_dssp             TTEEECCTT-TCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEETTC
T ss_pred             CCceeCCCC-ChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeCCc
Confidence            678999885 5555556999999999999842        2569999999999999999999997 89999999999999


Q ss_pred             ccC
Q 043209          214 AIL  216 (221)
Q Consensus       214 ~~~  216 (221)
                      +++
T Consensus       310 ~~~  312 (442)
T 3ss7_X          310 PCM  312 (442)
T ss_dssp             CHH
T ss_pred             hHH
Confidence            875

>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1

Probab=100.00  E-value=1.9e-45  Score=321.22  Aligned_cols=196  Identities=26%  Similarity=0.340  Sum_probs=176.9

Q ss_pred             CCCceeecccccCCCCCeEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCe
Q 043209           17 GNTPMVYLNNIVDGCKARIAAKLEMMEP-CSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYK   95 (221)
Q Consensus        17 ~~TPl~~~~~l~~~~g~~i~~K~E~~~p-tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~   95 (221)
                      .+|||+++++|++. |++||+|+|++|| |||||+|++.+++..+.  +.+.++ .+|+++|+||||.|+|++|+++|++
T Consensus        95 ~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl~  170 (389)
T 1wkv_A           95 KPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGYR  170 (389)
T ss_dssp             CSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTCE
T ss_pred             CCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCCe
Confidence            57999999999876 8899999999999 99999999999999854  333345 5699999999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHHHHcCCEEE-EeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhC-
Q 043209           96 LILVMPAFMSLEKRIILQAYGAQLI-LTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTR-  173 (221)
Q Consensus        96 ~~ivvp~~~~~~~~~~l~~~Ga~V~-~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~-  173 (221)
                      |+||||+.++..++..++.+||+|+ .++.. +++++++.+++++++. +.+|++||+|+.++.+||.+++.||++|+. 
T Consensus       171 ~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~~-~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~  248 (389)
T 1wkv_A          171 ARVYLPGAAEEFGKLLPRLLGAQVIVDPEAP-STVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRR  248 (389)
T ss_dssp             EEEEEETTSCHHHHHHHHHTTCEEEEETTCS-SSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEEEECCCCCHHHHHHHHHcCCEEEEEcCCC-CHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999 77732 5889999999988775 789999999999988899999999999994 


Q ss_pred             --CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCC
Q 043209          174 --GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG  218 (221)
Q Consensus       174 --~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~  218 (221)
                        ..||+||+|+|+||+++|++.+|++.+|++|||||||++++++.|
T Consensus       249 ~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~~~~l~G  295 (389)
T 1wkv_A          249 GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG  295 (389)
T ss_dssp             TTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTT
T ss_pred             cCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCCCCcccc
Confidence              369999999999999999999999999999999999999877653

>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*

Probab=100.00  E-value=6.9e-46  Score=325.74  Aligned_cols=201  Identities=20%  Similarity=0.203  Sum_probs=176.8

Q ss_pred             cccCCCceeecccccCCCC-CeEEEEeCCCC-CCCchhhHHHHHHHHHHH--HcCC----CC-------CCCe-EEEeeC
Q 043209           14 ELIGNTPMVYLNNIVDGCK-ARIAAKLEMME-PCSSVKDRIAFSMIKDAE--EKGL----IT-------PGKT-VLIECT   77 (221)
Q Consensus        14 ~~~~~TPl~~~~~l~~~~g-~~i~~K~E~~~-ptGs~K~R~a~~~~~~a~--~~g~----~~-------~g~~-~vv~as   77 (221)
                      ..+++|||+++++|++.+| .+||+|+|++| |+||||||++.+++.++.  +.|.    +.       .+.+ +||++|
T Consensus        40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS  119 (398)
T 4d9i_A           40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT  119 (398)
T ss_dssp             TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred             CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence            4678999999999998888 59999999999 999999999999999884  2231    00       1134 699999


Q ss_pred             CChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCC-----CC
Q 043209           78 SGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQ-----FK  152 (221)
Q Consensus        78 sGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~  152 (221)
                      +||||+|+|++|+.+|++|+||||++++..+++.++.+||+|+.++.+  |+++.+.+++++++. +++|+++     |+
T Consensus       120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~--~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~  196 (398)
T 4d9i_A          120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMN--YDDTVRLTMQHAQQH-GWEVVQDTAWEGYT  196 (398)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSC--HHHHHHHHHHHHHHH-TCEECCSSCBTTBC
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHHc-CCEEecCcccCCcC
Confidence            999999999999999999999999999999999999999999999985  899999999999887 8899986     65


Q ss_pred             -CCccHHHHHhhHHHHHHHhhCCC---CCEEEEccCchhHHHHHHHHHHhc--CCCcEEEEEeCCCCccCC
Q 043209          153 -NPANPKTHYETTGPEIWEGTRGQ---VDIFVSGIGTGGTVSGVGNFLKKK--NPEIKVYGVEPAESAILN  217 (221)
Q Consensus       153 -n~~~~~~g~~t~~~Ei~~q~~~~---~d~vv~p~G~Gg~~~Gi~~~~~~~--~~~~kvigVe~~~s~~~~  217 (221)
                       |+.+...||.|++.||++|++..   ||+||+|+|+||+++|++.++++.  .|++|||+|||++++++.
T Consensus       197 ~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~~~~~~  267 (398)
T 4d9i_A          197 KIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIY  267 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETTSCHHH
T ss_pred             CCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCCCchHH
Confidence             34555569999999999999544   999999999999999999999876  478999999999998875

>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*

Probab=100.00  E-value=1.6e-45  Score=316.87  Aligned_cols=202  Identities=19%  Similarity=0.166  Sum_probs=176.1

Q ss_pred             chhHHhhcccCCCceeecccccCCC-C-CeEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGC-K-ARIAAKLEMME-P--CSSVKDRIAFSMIKDAEEKGLITPGKTVLIE--CTSG   79 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~-g-~~i~~K~E~~~-p--tGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~--assG   79 (221)
                      ..++++...+++|||+++++|++.+ | .+||+|+|++| |  +||||||++.+++.+++++|.     .+||+  +|+|
T Consensus         4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~GassG   78 (338)
T 1tzj_A            4 QRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQS   78 (338)
T ss_dssp             GGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETTC
T ss_pred             ccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCchh
Confidence            4567789999999999999998877 7 89999999997 8  999999999999999998884     45888  7999


Q ss_pred             hHHHHHHHHHHHcCCeEEEEecCCCCHH--------HHHHHHHcCCEEEEeCCCCChhH-----HHHHHHHHHhhCCCee
Q 043209           80 NTGIGMACFAAAKGYKLILVMPAFMSLE--------KRIILQAYGAQLILTNAEMGIDE-----EFRIVEELLNKIPTSF  146 (221)
Q Consensus        80 N~~~alA~~a~~~g~~~~ivvp~~~~~~--------~~~~l~~~Ga~V~~v~~~~~~~~-----~~~~a~~~~~~~~~~~  146 (221)
                      |||+|+|++|+.+|++|++|||++.+..        |++.++.+||+|+.++.+  +++     +.+.+++++++.+..+
T Consensus        79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~~~~~~a~~l~~~~~~~~  156 (338)
T 1tzj_A           79 NQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG--FDIGFRRSWEDALESVRAAGGKPY  156 (338)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC---------CHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc--chhhHHHHHHHHHHHHHhcCCceE
Confidence            9999999999999999999999987654        999999999999999875  333     4777888888764445


Q ss_pred             e-cCC-CCCCccHHHHHhhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCCccCC
Q 043209          147 N-PHQ-FKNPANPKTHYETTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESAILN  217 (221)
Q Consensus       147 ~-~~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s~~~~  217 (221)
                      + .++ ++|+.+++ ||.+++.||++|++   ..+|+||+|+|||||++|++.+|++. +|+ |||+|||++++.+.
T Consensus       157 ~~p~~~~~n~~~~~-g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~~~~~~  231 (338)
T 1tzj_A          157 AIPAGCSDHPLGGL-GFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASAKPAQT  231 (338)
T ss_dssp             ECCGGGTSSTTTTT-HHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSSCHHHH
T ss_pred             EeCCCcCCCcccHH-HHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccCchHHH
Confidence            4 456 89999997 89999999999995   47999999999999999999999998 888 99999999987653

>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*

Probab=100.00  E-value=8e-43  Score=312.76  Aligned_cols=198  Identities=15%  Similarity=0.169  Sum_probs=176.6

Q ss_pred             hhcccCCCceeecccccCC-CC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCChHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDG-CK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEE---KGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~-~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~---~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      +...+++|||+++++|++. +| .+||+|+|++|||||||||++.+++..+.+   ++   .+..+||++|+||||.|+|
T Consensus       124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~---~g~~~Vv~aSsGNtG~AlA  200 (486)
T 1e5x_A          124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMK---RPVVGVGCASTGDTSAALS  200 (486)
T ss_dssp             CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTT---CCCCEEEECCCSHHHHHHH
T ss_pred             ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCCCHHHHHHH
Confidence            3556889999999999887 77 489999999999999999999888876554   33   1245699999999999999


Q ss_pred             HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209           87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG  165 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  165 (221)
                      ++|+++|++|+||+|.+ ++..|+++++.+||+|+.++++  |+++.+.+++++++. ++++++++ |+.+++ ||.|++
T Consensus       201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g~--~dd~~~~a~~l~~~~-~~~~vns~-N~~~i~-gq~t~~  275 (486)
T 1e5x_A          201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTD--FDGCMKLIREITAEL-PIYLANSL-NSLRLE-GQKTAA  275 (486)
T ss_dssp             HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-CEEEGGGS-HHHHHH-HHTHHH
T ss_pred             HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CEEEeCCC-CHHHHH-HHHHHH
Confidence            99999999999999996 9999999999999999999986  999999999999887 78889887 899997 899999


Q ss_pred             HHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCcEEEEEeCCCCccCC
Q 043209          166 PEIWEGTRG-QVDIFVSGIGTGGTVSGVGNFLKKKN------PEIKVYGVEPAESAILN  217 (221)
Q Consensus       166 ~Ei~~q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~~------~~~kvigVe~~~s~~~~  217 (221)
                      +||++|+++ .+|+||+|+|+||+++|++.+|++..      |.+|||+|||++++++.
T Consensus       276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~~~~~~l~  334 (486)
T 1e5x_A          276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQAANANPLY  334 (486)
T ss_dssp             HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHH
T ss_pred             HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEecCCCchHH
Confidence            999999965 58999999999999999999998864      78999999999987764

>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}

Probab=100.00  E-value=9.5e-43  Score=307.46  Aligned_cols=197  Identities=18%  Similarity=0.197  Sum_probs=164.1

Q ss_pred             cccC-CCceeecccccCCC-CCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           14 ELIG-NTPMVYLNNIVDGC-KARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        14 ~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      ..++ +|||+++++|++.+ +++||+|+|++|||||||+|++.+++..+.++|.    ...|+++|+||||.|+|++|+.
T Consensus        72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~  147 (418)
T 1x1q_A           72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL  147 (418)
T ss_dssp             HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred             cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence            4564 59999999998887 5899999999999999999999999998888874    3445568999999999999999


Q ss_pred             cCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeee-cCCCCCCc----cHHHHH
Q 043209           92 KGYKLILVMPAFM---SLEKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFN-PHQFKNPA----NPKTHY  161 (221)
Q Consensus        92 ~g~~~~ivvp~~~---~~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n~~----~~~~g~  161 (221)
                      +|++|+||||...   ...|+..++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.    ++..||
T Consensus       148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq  227 (418)
T 1x1q_A          148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ  227 (418)
T ss_dssp             HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence            9999999999852   23678899999999999984 3368888887754 4665445555 45554432    233499


Q ss_pred             hhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhc-CCCcEEEEEeCCCCc
Q 043209          162 ETTGPEIWEGTR----GQVDIFVSGIGTGGTVSGVGNFLKKK-NPEIKVYGVEPAESA  214 (221)
Q Consensus       162 ~t~~~Ei~~q~~----~~~d~vv~p~G~Gg~~~Gi~~~~~~~-~~~~kvigVe~~~s~  214 (221)
                      .|++.||++|+.    ..+|+||+|+|+||+++|++.+||+. +|++|||||||++++
T Consensus       228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~~g~~  285 (418)
T 1x1q_A          228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEG  285 (418)
T ss_dssp             THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEECCTT
T ss_pred             HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEecCCcc
Confidence            999999999983    35999999999999999999999987 899999999999984

>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*

Probab=100.00  E-value=3.4e-42  Score=301.36  Aligned_cols=198  Identities=19%  Similarity=0.218  Sum_probs=164.8

Q ss_pred             hhcccCC-CceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHH
Q 043209           12 ITELIGN-TPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        12 ~~~~~~~-TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a   89 (221)
                      +...+++ |||+++++|++.+| ++||+|+|++|||||||||++.+++..++++|.    ...|+++|+||||+|+|++|
T Consensus        43 ~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~----~~vv~~~ssGN~g~a~A~aa  118 (388)
T 1v8z_A           43 LKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK----TRLIAETGAGQHGVATAMAG  118 (388)
T ss_dssp             HHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHH
T ss_pred             HHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHH
Confidence            3457765 99999999988876 899999999999999999999999999888874    34344589999999999999


Q ss_pred             HHcCCeEEEEecCC-C--CHHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeee-cCCCCCCc----cHHH
Q 043209           90 AAKGYKLILVMPAF-M--SLEKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFN-PHQFKNPA----NPKT  159 (221)
Q Consensus        90 ~~~g~~~~ivvp~~-~--~~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n~~----~~~~  159 (221)
                      +.+|++|+||||+. .  ...|++.++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.    ++..
T Consensus       119 ~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~  198 (388)
T 1v8z_A          119 ALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRD  198 (388)
T ss_dssp             HHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHH
T ss_pred             HHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHH
Confidence            99999999999974 2  24668899999999999985 3358888888854 5666545444 56665543    2344


Q ss_pred             HHhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCc
Q 043209          160 HYETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA  214 (221)
Q Consensus       160 g~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~  214 (221)
                      ||.|++.||++|+    +..+|+||+|+|+||+++|++.+++. +|++|||||||++++
T Consensus       199 ~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~~-~~~~~vigve~~~~~  256 (388)
T 1v8z_A          199 FQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLVGVEAGGKG  256 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETB
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHhh-CCCceEEEEccCccc
Confidence            8999999999999    44699999999999999999999884 899999999999864

>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...

Probab=100.00  E-value=2.7e-42  Score=302.77  Aligned_cols=196  Identities=17%  Similarity=0.184  Sum_probs=164.4

Q ss_pred             hcccCC-CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCChHHHHHHHHHH
Q 043209           13 TELIGN-TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIE-CTSGNTGIGMACFAA   90 (221)
Q Consensus        13 ~~~~~~-TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~-assGN~~~alA~~a~   90 (221)
                      ...+++ |||+++++|++.+|++||+|+|++|||||||+|++.+++..++++|.    . .+|+ +|+||||.|+|++|+
T Consensus        49 ~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~----~-~vi~e~ssGNhg~a~A~aa~  123 (396)
T 1qop_B           49 KNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK----S-EIIAETGAGQHGVASALASA  123 (396)
T ss_dssp             HHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----C-EEEEEESSSHHHHHHHHHHH
T ss_pred             HHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc----C-EEEEecCchHHHHHHHHHHH
Confidence            356765 99999999999899999999999999999999999999999988884    3 4665 899999999999999


Q ss_pred             HcCCeEEEEecCC-CCH--HHHHHHHHcCCEEEEeCC-CCChhHHHHHHHHH-HhhCCCeee-cCCCCCCc----cHHHH
Q 043209           91 AKGYKLILVMPAF-MSL--EKRIILQAYGAQLILTNA-EMGIDEEFRIVEEL-LNKIPTSFN-PHQFKNPA----NPKTH  160 (221)
Q Consensus        91 ~~g~~~~ivvp~~-~~~--~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~~-~~~~~~~~~-~~~~~n~~----~~~~g  160 (221)
                      ++|++|+||||+. .+.  .|++.++.+||+|+.++. ..+++++.+.+.+. +++.++.+| ++++.|+.    ++..|
T Consensus       124 ~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~~g  203 (396)
T 1qop_B          124 LLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREF  203 (396)
T ss_dssp             HHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHT
T ss_pred             HCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHHHH
Confidence            9999999999985 333  457889999999999985 44588888888764 565445544 45554432    33448


Q ss_pred             HhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCc
Q 043209          161 YETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA  214 (221)
Q Consensus       161 ~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~  214 (221)
                      |.|++.||++|+    +..+|+||+|+|+||+++|++.+++ .+|++|||||||++++
T Consensus       204 ~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~~~~~  260 (396)
T 1qop_B          204 QRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEPGGHG  260 (396)
T ss_dssp             TTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEEEETB
T ss_pred             HhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeCCCcc
Confidence            999999999999    5579999999999999999999998 4899999999999874

>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A

Probab=100.00  E-value=3.3e-41  Score=297.74  Aligned_cols=196  Identities=17%  Similarity=0.208  Sum_probs=161.6

Q ss_pred             hcccCC-CceeecccccCCCC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           13 TELIGN-TPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        13 ~~~~~~-TPl~~~~~l~~~~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ...+++ |||+++++|++.+| .+||+|+|++|||||||+|++.+++..++++|.    ...|+++|+||||.|+|++|+
T Consensus        75 ~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa  150 (422)
T 2o2e_A           75 ANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACA  150 (422)
T ss_dssp             TTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred             HHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHH
Confidence            345554 99999999999884 899999999999999999999999999888874    444667999999999999999


Q ss_pred             HcCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCC-CCChhHHHHHHHH-HHhhCCCeee-cCCCCC--Cc--cHHHH
Q 043209           91 AKGYKLILVMPAFMS---LEKRIILQAYGAQLILTNA-EMGIDEEFRIVEE-LLNKIPTSFN-PHQFKN--PA--NPKTH  160 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~---~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n--~~--~~~~g  160 (221)
                      ++|++|+||||....   ..|+.+++.+||+|+.++. +.+++++.+.+.+ ++++.++.+| ++++.|  |.  ++..|
T Consensus       151 ~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~  230 (422)
T 2o2e_A          151 LLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDF  230 (422)
T ss_dssp             HHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHH
T ss_pred             HcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHH
Confidence            999999999998522   4577899999999999985 3468889888754 5666445555 455443  22  34458


Q ss_pred             HhhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 043209          161 YETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAES  213 (221)
Q Consensus       161 ~~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s  213 (221)
                      |.+++.||.+|+    +..||+||+|+|+||+++|++.+++. .|.+|||||||+++
T Consensus       231 q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~~g~  286 (422)
T 2o2e_A          231 QRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEAAGD  286 (422)
T ss_dssp             TTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEECC-
T ss_pred             HHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEecCCC
Confidence            999999999998    34599999999999999999888864 78999999999997

>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1

Probab=100.00  E-value=1.4e-35  Score=262.35  Aligned_cols=179  Identities=14%  Similarity=0.119  Sum_probs=152.6

Q ss_pred             CCCceeecccccCCCCCeEEEEeCCC-CCCCchhhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCChHHHHHH-HHHHH
Q 043209           17 GNTPMVYLNNIVDGCKARIAAKLEMM-EPCSSVKDRIAFSMI---KDAEEKGLITPGKTVLIECTSGNTGIGMA-CFAAA   91 (221)
Q Consensus        17 ~~TPl~~~~~l~~~~g~~i~~K~E~~-~ptGs~K~R~a~~~~---~~a~~~g~~~~g~~~vv~assGN~~~alA-~~a~~   91 (221)
                      ++|||+++++       +||+ +|++ |||||||||++.+++   .++ +++.    ..+|+++|+||||.|+| .+|+.
T Consensus        82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~~----~~~Iv~atsGNtG~A~A~~~a~~  148 (428)
T 1vb3_A           82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGDK----PVTILTATSGDTGAAVAHAFYGL  148 (428)
T ss_dssp             SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTTC----CEEEEEECSSSHHHHHHHHTTTC
T ss_pred             CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-HhcC----CCEEEecCCchHHHHHHHHHhhh
Confidence            7899999863       6999 7888 699999999999885   444 2232    56799999999999999 59999


Q ss_pred             cCCeEEEEecC-CCCHHHHHHHHHcCCEE--EEeCCCCChhHHHHHHHHHHhh-----CCCeeecCCCCCCccHHHHHhh
Q 043209           92 KGYKLILVMPA-FMSLEKRIILQAYGAQL--ILTNAEMGIDEEFRIVEELLNK-----IPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        92 ~g~~~~ivvp~-~~~~~~~~~l~~~Ga~V--~~v~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      +|++|+||+|+ +++..++++|+.+||+|  +.+++  +++++.+.+++++++     ..+++++++ .|+.++. ||.+
T Consensus       149 ~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~-~n~~~~~-gq~t  224 (428)
T 1vb3_A          149 PNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDG--DFDACQALVKQAFDDEELKVALGLNSANS-INISRLL-AQIC  224 (428)
T ss_dssp             TTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEES--CHHHHHHHHHHGGGCHHHHHHHTEECCST-TSHHHHH-HTTH
T ss_pred             cCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCC-CCHHHHH-HHHH
Confidence            99999999999 59999999999999999  56665  499999999888753     125666766 4788876 8999


Q ss_pred             HHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209          164 TGPEIWEGTRG---QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE  212 (221)
Q Consensus       164 ~~~Ei~~q~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~  212 (221)
                      ++.||++|+..   .+|+||+|+|+||+++|++.+++...|.+|||+|++++
T Consensus       225 ~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~~~~  276 (428)
T 1vb3_A          225 YYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN  276 (428)
T ss_dssp             HHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSC
T ss_pred             HHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeecCCC
Confidence            99999999964   59999999999999999999998877888999999886

>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1

Probab=100.00  E-value=3.7e-33  Score=250.75  Aligned_cols=190  Identities=16%  Similarity=0.046  Sum_probs=148.4

Q ss_pred             ccCCCceee--cccccCCCCCeEEEEeCCCCCCCchhhHHHHHHH---HHHH-HcCC-----CCCCCeEEEeeCCChHHH
Q 043209           15 LIGNTPMVY--LNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMI---KDAE-EKGL-----ITPGKTVLIECTSGNTGI   83 (221)
Q Consensus        15 ~~~~TPl~~--~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~---~~a~-~~g~-----~~~g~~~vv~assGN~~~   83 (221)
                      ..+.|||++  ++++     .+||+|.|++|||||||||++.+++   .+++ ++|.     +.+ ..+||++||||||.
T Consensus        93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~-~~~Iv~ATSGNtG~  166 (514)
T 1kl7_A           93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKK-QITVVGATSGDTGS  166 (514)
T ss_dssp             STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCC-CEEEEEECSSSHHH
T ss_pred             CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCC-CCEEEECCCCcHHH
Confidence            477899999  7655     4799999999999999999999994   4443 3441     333 35699999999999


Q ss_pred             HHHHHH--HHcCCeEEEEecCC-CCHHHHHHHH---HcCCEEEEeCCCCChhHHHHHHHHHHhhCC-----CeeecCCCC
Q 043209           84 GMACFA--AAKGYKLILVMPAF-MSLEKRIILQ---AYGAQLILTNAEMGIDEEFRIVEELLNKIP-----TSFNPHQFK  152 (221)
Q Consensus        84 alA~~a--~~~g~~~~ivvp~~-~~~~~~~~l~---~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~  152 (221)
                      | |.+|  +..|++++||+|++ ++..++.++.   ..|++|+.+++  +|+++++.+++++++.+     +.++.++. 
T Consensus       167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~g--~fdda~~~vk~l~~~~~~~~~~~~~~~Ns~-  242 (514)
T 1kl7_A          167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTG--TFDNCQDIVKAIFGDKEFNSKHNVGAVNSI-  242 (514)
T ss_dssp             H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESS--CHHHHHHHHHHHHHCSSCC--CCBCCCCSC-
T ss_pred             H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcCC--CHHHHHHHHHHHHhcccccccceeEeeCCC-
Confidence            9 5555  78899999999997 8888777773   44556666666  49999999999988752     23333332 


Q ss_pred             CCccHHHHHhhHHHHHHHhh-C---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          153 NPANPKTHYETTGPEIWEGT-R---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       153 n~~~~~~g~~t~~~Ei~~q~-~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      |+..++ |+.+.+.|+++|+ +   +.+|+||+|+|+||++.|++.+.+.-.|.+|+|+|||++ +++
T Consensus       243 N~~ri~-gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~~~n-~~l  308 (514)
T 1kl7_A          243 NWARIL-AQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEN-DIL  308 (514)
T ss_dssp             CHHHHH-HHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSC-CHH
T ss_pred             CHhHHh-hHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEeCCc-chH
Confidence            555554 9999999999998 4   358999999999999999887554445888999999998 444

>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}

Probab=100.00  E-value=4.8e-33  Score=247.27  Aligned_cols=182  Identities=15%  Similarity=0.133  Sum_probs=150.9

Q ss_pred             CCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHH-HHHHHHHHc
Q 043209           18 NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSM---IKDAE-EKGLITPGKTVLIECTSGNTGI-GMACFAAAK   92 (221)
Q Consensus        18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~---~~~a~-~~g~~~~g~~~vv~assGN~~~-alA~~a~~~   92 (221)
                      -|||+++..       ++|+|.|++|||||||||++.++   +..+. ++|.    ..+|+++||||||. +++++|+++
T Consensus        93 ~~pl~~l~~-------~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~  161 (468)
T 4f4f_A           93 VCPLVQTDA-------NEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRD  161 (468)
T ss_dssp             SSCEEEEET-------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCS
T ss_pred             CCceEEecC-------CeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhcc
Confidence            389998642       69999999999999999999999   66664 5553    35799999999995 556778889


Q ss_pred             CCeEEEEecCC-CCHHHHHHHHHcC-CEE--EEeCCCCChhHHHHHHHHHHhhCC-----CeeecCCCCCCccHHHHHhh
Q 043209           93 GYKLILVMPAF-MSLEKRIILQAYG-AQL--ILTNAEMGIDEEFRIVEELLNKIP-----TSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        93 g~~~~ivvp~~-~~~~~~~~l~~~G-a~V--~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~n~~~~~~g~~t  163 (221)
                      |++++||+|++ ++..++++++.+| ++|  +.++++  |+++.+.+++++++.+     +++++++ .|+..++ |+.|
T Consensus       162 Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g~--fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~ri~-GQ~T  237 (468)
T 4f4f_A          162 NTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEGN--FDDCQNLVKGMFNDLEFCDALSLSGVNS-INWARIM-PQVV  237 (468)
T ss_dssp             SEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEESC--HHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHHHG-GGHH
T ss_pred             CCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCCC--HHHHHHHHHHHHhccccccccceEeCCC-CCHHHHH-hHHH
Confidence            99999999998 9999999999997 465  566664  9999999999887642     3566665 5787775 9999


Q ss_pred             HHHHHHHhhCCCCCE---EEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          164 TGPEIWEGTRGQVDI---FVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~---vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      ++.||++|++ .+|.   |+||+|+||+++|++.+.+.-.|..|+|+| +.++++|
T Consensus       238 ~~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a-~n~~~~l  291 (468)
T 4f4f_A          238 YYFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIA-TNDNDIL  291 (468)
T ss_dssp             HHHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEE-ECSCCHH
T ss_pred             HHHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEE-eCCchHH
Confidence            9999999994 7899   999999999999999884443478899999 7777665

>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}

Probab=100.00  E-value=6.5e-32  Score=240.35  Aligned_cols=186  Identities=17%  Similarity=0.075  Sum_probs=152.4

Q ss_pred             CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCChHHHHHHHHHH-HcC
Q 043209           19 TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSM---IKDAE-EKGLITPGKTVLIECTSGNTGIGMACFAA-AKG   93 (221)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~---~~~a~-~~g~~~~g~~~vv~assGN~~~alA~~a~-~~g   93 (221)
                      |||+++..-   .+.++|+|.|++|||||||||++.++   +..+. ++|.    ..+|+++||||||.|.+++++ ..|
T Consensus       103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G  175 (487)
T 3v7n_A          103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG  175 (487)
T ss_dssp             SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred             ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence            799887520   01239999999999999999999998   77775 4553    456999999999999777776 789


Q ss_pred             CeEEEEecCC-CCHHHHHHHHHcCC---EEEEeCCCCChhHHHHHHHHHHhhC-----CCeeecCCCCCCccHHHHHhhH
Q 043209           94 YKLILVMPAF-MSLEKRIILQAYGA---QLILTNAEMGIDEEFRIVEELLNKI-----PTSFNPHQFKNPANPKTHYETT  164 (221)
Q Consensus        94 ~~~~ivvp~~-~~~~~~~~l~~~Ga---~V~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~  164 (221)
                      ++++||+|++ ++..|+++|+.+|+   +|+.++++  |++|++.+++++++.     -+..+++++ |+..++ |+.+.
T Consensus       176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G~--fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~ri~-gQ~ty  251 (487)
T 3v7n_A          176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNGV--FDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWARVV-AQVVY  251 (487)
T ss_dssp             EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEESC--HHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHHHH-HHHHH
T ss_pred             CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECCC--HHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHHHH-hHHHH
Confidence            9999999997 99999999999998   67778775  999999999887631     156677664 787775 99988


Q ss_pred             HHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          165 GPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       165 ~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      ++|+..|+.   +.+|+|+||+|+||+++|++.+.+.-.|..|+|+||+++ +++
T Consensus       252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~~~n-~~l  305 (487)
T 3v7n_A          252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVATNEN-DVL  305 (487)
T ss_dssp             HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEECTTC-HHH
T ss_pred             HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEeCCC-cHH
Confidence            888888873   359999999999999999988765545878999999998 443

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=94.92  E-value=0.69  Score=33.25  Aligned_cols=50  Identities=20%  Similarity=0.163  Sum_probs=40.2

Q ss_pred             EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      .++..+.|..|..++...+..|.+++++-.   +..+.+.++..|..++.-+.
T Consensus         9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~   58 (140)
T 3fwz_A            9 HALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNA   58 (140)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCT
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCC
Confidence            378888999999999999999998887764   46677777788888766544

>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2

Probab=93.50  E-value=0.94  Score=35.01  Aligned_cols=76  Identities=20%  Similarity=0.323  Sum_probs=57.0

Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 043209           43 EPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM-------PA--FMSLEKRIILQ  113 (221)
Q Consensus        43 ~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~l~  113 (221)
                      +|.--+=+......+++|.+.|.    +..||.+++|.++..+.-..  -|++.++|-       |.  ..+++..+.|+
T Consensus        22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~   95 (201)
T 1vp8_A           22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR   95 (201)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence            44446667788888899999885    56555556699987666533  688888887       43  35788999999


Q ss_pred             HcCCEEEEeCC
Q 043209          114 AYGAQLILTNA  124 (221)
Q Consensus       114 ~~Ga~V~~v~~  124 (221)
                      ..|.+|+.-..
T Consensus        96 ~~G~~V~t~tH  106 (201)
T 1vp8_A           96 KRGAKIVRQSH  106 (201)
T ss_dssp             HTTCEEEECCC
T ss_pred             hCCCEEEEEec
Confidence            99999998654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=92.86  E-value=1  Score=37.12  Aligned_cols=60  Identities=28%  Similarity=0.335  Sum_probs=46.3

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +...+.+|++.+|...+|..|.+++..++..|.+++++..   +..+++.++.+|++.+....
T Consensus       134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~  193 (325)
T 3jyn_A          134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETIDYS  193 (325)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEETT
T ss_pred             HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEeCC
Confidence            4456788888666666899999999999999997665543   56788888899997665433

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=92.57  E-value=1.5  Score=36.27  Aligned_cols=59  Identities=27%  Similarity=0.378  Sum_probs=45.8

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +...+.+|++.+|...+|..|.+++..++.+|.+++++..   +..+++.++.+|++.+...
T Consensus       142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~  200 (334)
T 3qwb_A          142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINA  200 (334)
T ss_dssp             TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred             HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeC
Confidence            3456788888666666899999999999999997665543   5678888899999866543

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=92.56  E-value=0.83  Score=39.78  Aligned_cols=57  Identities=35%  Similarity=0.357  Sum_probs=46.1

Q ss_pred             CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ..+.+|.+.+|...+|..|.+.+..|+.+|.+.+++.   .+..+++.++.+|++.+...
T Consensus       224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~---~~~~~~~~~~~lGa~~vi~~  280 (456)
T 3krt_A          224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVV---SSPQKAEICRAMGAEAIIDR  280 (456)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHHTCCEEEET
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEE---CCHHHHHHHHhhCCcEEEec
Confidence            4678888766666669999999999999999877776   36788999999999876543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=92.30  E-value=1.1  Score=37.08  Aligned_cols=63  Identities=24%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      +.....+.+|++ |+..++|..|...+..|+.+|.+.++.+.  .+..|++.++.+||+.+....+
T Consensus       152 ~~~~~~~~~g~~-VlV~GaG~vG~~aiq~ak~~G~~~vi~~~--~~~~k~~~a~~lGa~~~i~~~~  214 (346)
T 4a2c_A          152 AFHLAQGCENKN-VIIIGAGTIGLLAIQCAVALGAKSVTAID--ISSEKLALAKSFGAMQTFNSSE  214 (346)
T ss_dssp             HHHHTTCCTTSE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHhccCCCCE-EEEECCCCcchHHHHHHHHcCCcEEEEEe--chHHHHHHHHHcCCeEEEeCCC
Confidence            344556778877 45556688999999999999998877773  4678899999999987765544

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=92.15  E-value=2.6  Score=33.87  Aligned_cols=74  Identities=14%  Similarity=0.067  Sum_probs=47.8

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++--|+++|......|.+++++-... ......+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36778999999999999998888898866643321 1123345677788877765432 23445555555555554

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=92.10  E-value=1.8  Score=35.69  Aligned_cols=58  Identities=24%  Similarity=0.295  Sum_probs=45.5

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEEEEe
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIIL-QAYGAQLILT  122 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l-~~~Ga~V~~v  122 (221)
                      +...+.+|++.+|...+|..|.+++..++..|.+++++.   .+..+++.+ +.+|++.+..
T Consensus       143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~~~g~~~~~~  201 (336)
T 4b7c_A          143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA---GGAEKCRFLVEELGFDGAID  201 (336)
T ss_dssp             HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCSEEEE
T ss_pred             HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHHcCCCEEEE
Confidence            566788888877777779999999999999999766554   346778877 8899976554

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=92.01  E-value=1.7  Score=36.33  Aligned_cols=60  Identities=22%  Similarity=0.160  Sum_probs=46.7

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +...+.+|++.+|...+|..|.+++..++..|.+++++.   .+..+++.++.+|++.+....
T Consensus       161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~~~  220 (353)
T 4dup_A          161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATA---GSTGKCEACERLGAKRGINYR  220 (353)
T ss_dssp             TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHHTCSEEEETT
T ss_pred             HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEEeCC
Confidence            556788888867776889999999999999999855554   356788888889998765433

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=91.99  E-value=2.1  Score=35.48  Aligned_cols=62  Identities=21%  Similarity=0.240  Sum_probs=46.2

Q ss_pred             HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           59 DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        59 ~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      .+.+...+.+|++.+| .++|..|.+.+..|+.+|.+++++.   .+..+++.++.+|++.+.-..
T Consensus       157 ~~l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~i~~~  218 (340)
T 3s2e_A          157 KGLKVTDTRPGQWVVI-SGIGGLGHVAVQYARAMGLRVAAVD---IDDAKLNLARRLGAEVAVNAR  218 (340)
T ss_dssp             HHHHTTTCCTTSEEEE-ECCSTTHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHHcCCCCCCEEEE-ECCCHHHHHHHHHHHHCCCeEEEEe---CCHHHHHHHHHcCCCEEEeCC
Confidence            3445566788887555 4568899999999999999765543   357888889999998765443

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=91.90  E-value=3.2  Score=33.38  Aligned_cols=74  Identities=20%  Similarity=0.048  Sum_probs=44.9

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++--|+++|......|.++++.-... ......+.++..|.+++.+..+- +.++..+..++..++.
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            46778888889999999998888888755542211 11223455666777777654331 2334444445555544

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=91.73  E-value=2  Score=36.45  Aligned_cols=58  Identities=21%  Similarity=0.280  Sum_probs=43.1

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      .+...+.+|.+.+| .++|..|......|+.+|.+.++.+.  .+..+++.++.+|++++.
T Consensus       178 l~~~~~~~g~~VlV-~GaG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~i~  235 (398)
T 1kol_A          178 AVTAGVGPGSTVYV-AGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIAD  235 (398)
T ss_dssp             HHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEEE
T ss_pred             HHHcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcEEc
Confidence            34456788877555 55799999999999999985444442  357888889999998543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=91.24  E-value=0.92  Score=38.32  Aligned_cols=52  Identities=19%  Similarity=0.109  Sum_probs=40.8

Q ss_pred             CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           67 TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        67 ~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+|.+.+|...+|..|.+.+..|+.+|.+++++.    +..+++.++.+|++.++-
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~  214 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFD  214 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEE
Confidence            5677766666779999999999999999866554    356788889999976553

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=91.23  E-value=1.8  Score=35.54  Aligned_cols=59  Identities=27%  Similarity=0.352  Sum_probs=45.1

Q ss_pred             HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +.+...+.+|.+.+|...+|..|.+....|+.+|.+++++.    +..+++.++.+|++.+.-
T Consensus       144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~  202 (321)
T 3tqh_A          144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCIN  202 (321)
T ss_dssp             HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEE
T ss_pred             HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEe
Confidence            44567788888756655689999999999999999766554    345678889999986543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=91.10  E-value=2.6  Score=35.32  Aligned_cols=57  Identities=28%  Similarity=0.285  Sum_probs=44.7

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +...+.+|++.+|.. +|..|.+.+..|+.+|.+++++.   .+..+++.++.+|++.+..
T Consensus       183 ~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~  239 (363)
T 3uog_A          183 EKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTS---SSREKLDRAFALGADHGIN  239 (363)
T ss_dssp             TTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHTCSEEEE
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEe---cCchhHHHHHHcCCCEEEc
Confidence            556788888755555 89999999999999999766554   3567888899999976654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=90.95  E-value=2.4  Score=35.19  Aligned_cols=54  Identities=22%  Similarity=0.294  Sum_probs=44.0

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQL  119 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V  119 (221)
                      +...+.+|++.+|...+|..|.+++..|+..|.+++++    .+..+++.++.+|++.
T Consensus       144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~  197 (343)
T 3gaz_A          144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP  197 (343)
T ss_dssp             TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred             HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence            56678888886666668999999999999999976555    2567788889999998

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=90.93  E-value=2.5  Score=35.43  Aligned_cols=58  Identities=26%  Similarity=0.318  Sum_probs=44.1

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +.+.+.+|++.+|...+|..|.+++..|+.+|.+++++..   +..+++.++.+|++.+..
T Consensus       157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~  214 (362)
T 2c0c_A          157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPIN  214 (362)
T ss_dssp             HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEe
Confidence            4456778877666666899999999999999997555543   467788888899986553

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=90.79  E-value=5.3  Score=31.86  Aligned_cols=56  Identities=23%  Similarity=0.294  Sum_probs=38.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++..+|+.+++--|.++|......|.+++++......        ......++..|.++..+..
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKC   69 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEEC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeC
Confidence            3677889899999999999988899987776544221        2234445566777665543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=90.74  E-value=1.4  Score=36.76  Aligned_cols=65  Identities=18%  Similarity=0.309  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           53 AFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        53 a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++.++..+.+.|    ++..+|.+.+|..|.+.+..|+.+|.+++++..   +..+++.++.+|++.+....
T Consensus       153 a~~~~~~~~~~g----~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~  217 (349)
T 3pi7_A          153 AIAMFDIVKQEG----EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNEK  217 (349)
T ss_dssp             HHHHHHHHHHHC----CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEETT
T ss_pred             HHHHHHHHhhCC----CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEECC
Confidence            455555554333    145566678899999999999999997666653   34567777889997665443

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=90.64  E-value=2  Score=36.16  Aligned_cols=59  Identities=22%  Similarity=0.229  Sum_probs=43.8

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+...+.+|.+.+|. ++|..|.+....|+.+|.+-++.+  +.+..+++.++.+|++.+..
T Consensus       175 l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~a~~lGa~~vi~  233 (370)
T 4ej6_A          175 VDLSGIKAGSTVAIL-GGGVIGLLTVQLARLAGATTVILS--TRQATKRRLAEEVGATATVD  233 (370)
T ss_dssp             HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEEC
T ss_pred             HHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEC
Confidence            345567788775555 569999999999999999555554  33577888889999986654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=90.56  E-value=1.7  Score=36.12  Aligned_cols=58  Identities=26%  Similarity=0.433  Sum_probs=44.5

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +...+.+|++.+|...+|..|.+++..|+.+|.+++++...   ..+++.++.+|++.+..
T Consensus       153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~v~~  210 (342)
T 4eye_A          153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR---TAATEFVKSVGADIVLP  210 (342)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---GGGHHHHHHHTCSEEEE
T ss_pred             HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEec
Confidence            56678888886777777999999999999999977666543   44566777889886653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=90.51  E-value=4.3  Score=34.99  Aligned_cols=101  Identities=15%  Similarity=0.068  Sum_probs=65.9

Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCCC-H----------
Q 043209           40 EMMEPCSSVKDRIAFSMIKDAEEKGLI-TPGKTVLIECTSGNTGIGMACFAAA-KGYKLILVMPAFMS-L----------  106 (221)
Q Consensus        40 E~~~ptGs~K~R~a~~~~~~a~~~g~~-~~g~~~vv~assGN~~~alA~~a~~-~g~~~~ivvp~~~~-~----------  106 (221)
                      =+.+|.|+-+.  ....+...++++.+ ..++..+|+.+++..|+|+|..... .|.+++++-..... .          
T Consensus        19 ~~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn   96 (405)
T 3zu3_A           19 VTAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYN   96 (405)
T ss_dssp             CCCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHH
T ss_pred             cCCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchh
Confidence            35678887554  55667777777776 4457778888888999999999888 99988776433211 1          


Q ss_pred             --HHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209          107 --EKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus       107 --~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                        ...+.++..|.++..+..+ .+.++..+.+.+..++.
T Consensus        97 ~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~  135 (405)
T 3zu3_A           97 SAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL  135 (405)
T ss_dssp             HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence              1233566788877665433 23445555666666665

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=90.44  E-value=1.7  Score=36.84  Aligned_cols=63  Identities=22%  Similarity=0.347  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEee-CCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           53 AFSMIKDAEEKGLITPGKTVLIEC-TSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        53 a~~~~~~a~~~g~~~~g~~~vv~a-ssGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++..+..+.+.     |.+.+|.. .+|..|.+....|+.+|.+++++.   .+..+++.++.+|++.+...
T Consensus       160 a~~~~~~~~~~-----g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~~~  223 (379)
T 3iup_A          160 ALGMVETMRLE-----GHSALVHTAAASNLGQMLNQICLKDGIKLVNIV---RKQEQADLLKAQGAVHVCNA  223 (379)
T ss_dssp             HHHHHHHHHHT-----TCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE---SSHHHHHHHHHTTCSCEEET
T ss_pred             HHHHHHHhccC-----CCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHhCCCcEEEeC
Confidence            44555554433     35556653 789999999999999999866654   35788888999999865543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=90.07  E-value=2  Score=35.75  Aligned_cols=60  Identities=25%  Similarity=0.157  Sum_probs=44.0

Q ss_pred             HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +.+...+.+|.+.+|. ++|..|.+....|+.+|.+-++.+  +.+..+++.++.+|++.+.-
T Consensus       158 al~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~  217 (352)
T 3fpc_A          158 GAELANIKLGDTVCVI-GIGPVGLMSVAGANHLGAGRIFAV--GSRKHCCDIALEYGATDIIN  217 (352)
T ss_dssp             HHHHTTCCTTCCEEEE-CCSHHHHHHHHHHHTTTCSSEEEE--CCCHHHHHHHHHHTCCEEEC
T ss_pred             HHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEE--CCCHHHHHHHHHhCCceEEc
Confidence            3455667888775555 579999999999999998434444  34577888899999976543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=90.04  E-value=1.9  Score=35.79  Aligned_cols=60  Identities=17%  Similarity=0.207  Sum_probs=44.2

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      .+...+.+|++.+|...+|..|.+++..|+.+|.+++++....   .+++.++.+|++.+...
T Consensus       137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~  196 (340)
T 3gms_A          137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDT  196 (340)
T ss_dssp             HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEET
T ss_pred             HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeC
Confidence            3556788888877777777999999999999999876665433   35566667898766543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=89.90  E-value=3.9  Score=32.02  Aligned_cols=55  Identities=16%  Similarity=0.107  Sum_probs=36.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|.-|.++|......|.+++++-..... ....+.++..+.++..+.
T Consensus         9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   64 (253)
T 3qiv_A            9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVA   64 (253)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            3667888889999999999988889886665432111 122334455566665544

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=89.85  E-value=6.4  Score=32.87  Aligned_cols=55  Identities=22%  Similarity=0.241  Sum_probs=39.1

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.+++--|.++|......|.+++++......        ....+.++..|.++..+.
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~  107 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCI  107 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEE
Confidence            3677888888999999999988899987777644321        233455666777766554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=89.85  E-value=3.9  Score=32.80  Aligned_cols=54  Identities=17%  Similarity=0.076  Sum_probs=37.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|.-|.++|......|.+++++.... ......+.++..|.++..+.
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   87 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR   87 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            6778899999999999999888999877766442 22333455566665555443

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=89.83  E-value=4.8  Score=29.87  Aligned_cols=49  Identities=18%  Similarity=0.104  Sum_probs=38.1

Q ss_pred             EEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           73 LIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        73 vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++..+.|..|..++...+.. |.+++++-.   +..+.+.++..|.+++..+.
T Consensus        42 v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~   91 (183)
T 3c85_A           42 VLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDA   91 (183)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCT
T ss_pred             EEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCC
Confidence            66667899999999999888 998777743   45677777788888766544

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=89.64  E-value=5.4  Score=34.34  Aligned_cols=50  Identities=16%  Similarity=0.233  Sum_probs=40.2

Q ss_pred             EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      .|+..+.|..|..++......|++++++-   .+..+++.++..|..++.-+.
T Consensus         6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId---~d~~~v~~~~~~g~~vi~GDa   55 (413)
T 3l9w_A            6 RVIIAGFGRFGQITGRLLLSSGVKMVVLD---HDPDHIETLRKFGMKVFYGDA   55 (413)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEEE---CCHHHHHHHHHTTCCCEESCT
T ss_pred             eEEEECCCHHHHHHHHHHHHCCCCEEEEE---CCHHHHHHHHhCCCeEEEcCC
Confidence            37888899999999999999999988774   346777888888887766554

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=89.61  E-value=4  Score=32.66  Aligned_cols=46  Identities=22%  Similarity=0.106  Sum_probs=32.3

Q ss_pred             CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcC
Q 043209           70 KTVLIECTSGN--TGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYG  116 (221)
Q Consensus        70 ~~~vv~assGN--~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~G  116 (221)
                      +..+|+..+|+  -|.++|......|.+++++.... ....++.+...+
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~   74 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEF   74 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGG
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhc
Confidence            56678877777  89999988888898876665444 455555554433

>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*

Probab=89.54  E-value=6.2  Score=30.73  Aligned_cols=48  Identities=13%  Similarity=0.136  Sum_probs=36.3

Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC---CCcEEEEEeCCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN---PEIKVYGVEPAE  212 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~---~~~kvigVe~~~  212 (221)
                      ....+++++-+.++|+||+.  +...+.|+..++++.+   .++.|+|++...
T Consensus       168 ~~~~~~l~~~~~~~~ai~~~--~d~~a~g~~~al~~~g~vp~di~vvg~d~~~  218 (272)
T 3o74_A          168 RLMQQLIDDLGGLPDALVTT--SYVLLQGVFDTLQARPVDSRQLQLGTFGDNQ  218 (272)
T ss_dssp             HHHHHHHHHHTSCCSEEEES--SHHHHHHHHHHHHTSCGGGCCCEEEEESCCG
T ss_pred             HHHHHHHhcCCCCCcEEEEe--CchHHHHHHHHHHHcCCCccceEEEEeCChH
Confidence            45566666652269999984  6678889999999987   579999997653

>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}

Probab=89.53  E-value=6.8  Score=31.18  Aligned_cols=47  Identities=11%  Similarity=0.070  Sum_probs=35.4

Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE  212 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~  212 (221)
                      ....+++++- ++||+|||.  +..++.|+..++++.+    .++.|+|.+...
T Consensus       176 ~~~~~~l~~~-~~~~ai~~~--nd~~A~g~~~al~~~G~~vP~di~vig~D~~~  226 (294)
T 3qk7_A          176 LAASRLLALE-VPPTAIITD--CNMLGDGVASALDKAGLLGGEGISLIAYDGLP  226 (294)
T ss_dssp             HHHHHHHHSS-SCCSEEEES--SHHHHHHHHHHHHHTTCSSTTSCEEEEETCSC
T ss_pred             HHHHHHHcCC-CCCcEEEEC--CHHHHHHHHHHHHHcCCCCCCceEEEeecCcc
Confidence            3445565553 579999974  6678889999999987    378999998654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=89.47  E-value=1.9  Score=36.01  Aligned_cols=60  Identities=22%  Similarity=0.293  Sum_probs=45.9

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~  121 (221)
                      +.+.+.+|.+.+|...+|..|.+....|+.+|.+.++++.... ...+++.++.+|++.+.
T Consensus       161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi  221 (357)
T 1zsy_A          161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI  221 (357)
T ss_dssp             HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred             HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence            4466788888666666799999999999999998887775543 34567788899997654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=89.38  E-value=7.1  Score=31.16  Aligned_cols=54  Identities=17%  Similarity=0.107  Sum_probs=33.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +..+|+.++|--|.++|......|.+++++-.... .....+.++..|.++..+.
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   81 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVA   81 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence            66788888899999999888888887554432211 1122334455566665544

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=89.21  E-value=5  Score=31.86  Aligned_cols=55  Identities=16%  Similarity=0.183  Sum_probs=37.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +..+|+.++|.-|.++|......|.++++.......  ....+.++..|.++..+..
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG   83 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEc
Confidence            567888888999999999999899987666433211  2223445566777665543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=89.14  E-value=4  Score=32.26  Aligned_cols=54  Identities=13%  Similarity=0.110  Sum_probs=35.7

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|--|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   84 (262)
T 3rkr_A           30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA   84 (262)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEE
Confidence            567888888999999999988889986665433211 122344555666665544

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=89.13  E-value=4.4  Score=33.79  Aligned_cols=57  Identities=19%  Similarity=0.189  Sum_probs=43.8

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|++.+|+..+|..|.+++..++..|.+++++..   +..+++.++.+|++.+.
T Consensus       156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~  212 (354)
T 2j8z_A          156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGF  212 (354)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEE
T ss_pred             HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEE
Confidence            4556788888677666899999999999999997655543   46777777889987654

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=89.05  E-value=2.5  Score=33.98  Aligned_cols=74  Identities=9%  Similarity=-0.040  Sum_probs=52.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++--|+++|......|.+++++-.........+.+...|.++..+..+ .+.++..+...+..++.
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            477799999999999999999999998888776555566667777778776655432 13445555555555554

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=88.91  E-value=5.6  Score=32.64  Aligned_cols=57  Identities=28%  Similarity=0.302  Sum_probs=43.5

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|++.+|+..+|..|.+++..++..|.+++++..   +..+++.++.+|++.+.
T Consensus       139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~  195 (333)
T 1v3u_A          139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAF  195 (333)
T ss_dssp             TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred             HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence            4556778888777777899999999999999997665542   45677777888986544

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=88.72  E-value=2.6  Score=35.95  Aligned_cols=57  Identities=23%  Similarity=0.356  Sum_probs=42.9

Q ss_pred             CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +.+.+|.+.+|. ++|..|.+....|+.+|.+-++.+  +.+..+++.++.+|++.+.-.
T Consensus       209 ~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~--~~~~~~~~~~~~lGa~~vi~~  265 (404)
T 3ip1_A          209 GGIRPGDNVVIL-GGGPIGLAAVAILKHAGASKVILS--EPSEVRRNLAKELGADHVIDP  265 (404)
T ss_dssp             CCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEE--CSCHHHHHHHHHHTCSEEECT
T ss_pred             cCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCCEEEcC
Confidence            357888775555 559999999999999999544444  246788899999999866543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=88.61  E-value=7.1  Score=30.29  Aligned_cols=55  Identities=27%  Similarity=0.227  Sum_probs=37.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-CCCH-HHHHHHHHcCCEEEEeCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA-FMSL-EKRIILQAYGAQLILTNA  124 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~-~~~~-~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++.+|+..+|..|.+++......|.+++++... .... ...+.++..|.++..+..
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~   64 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA   64 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEEC
Confidence            566888888999999999988889987776654 2222 223445555666655543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=88.57  E-value=4  Score=33.14  Aligned_cols=53  Identities=15%  Similarity=0.097  Sum_probs=35.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILT  122 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v  122 (221)
                      +..+|+..+|.-|.+++......|.+++++...... ....+.++..|.++..+
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~   85 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV   85 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEE
Confidence            677888889999999999998899886665433211 12233445556555544

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=88.56  E-value=4.2  Score=30.57  Aligned_cols=57  Identities=28%  Similarity=0.459  Sum_probs=42.0

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|++.+|+..+|..|.+++..++..|.+++++..   +..+.+.++.+|++.+.
T Consensus        32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~   88 (198)
T 1pqw_A           32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVG   88 (198)
T ss_dssp             TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEE
T ss_pred             HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEe
Confidence            3456778877666666899999999999999987655542   45666677788986543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=88.56  E-value=4.6  Score=31.54  Aligned_cols=53  Identities=13%  Similarity=0.114  Sum_probs=34.4

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILT  122 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v  122 (221)
                      ++.+|+.++|..|.+++......|.+++++...... ....+.++..|.++..+
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~   67 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSV   67 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence            567888899999999999988889886666533111 11223444445555444

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=88.49  E-value=7.1  Score=31.33  Aligned_cols=55  Identities=25%  Similarity=0.271  Sum_probs=37.8

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++..+|+.+++.-|.++|......|.+++++......        ....+.++..|.++..+.
T Consensus         9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (285)
T 3sc4_A            9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIV   71 (285)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEE
Confidence            3677888888999999999988889987776644321        223444555666666554

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=88.49  E-value=4.2  Score=34.04  Aligned_cols=59  Identities=15%  Similarity=0.257  Sum_probs=43.1

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +...+.+|++.+|. ++|..|.+.+..|+.+|.+.++.+.  .+..+++.++.+|++.+.-.
T Consensus       184 ~~~~~~~g~~VlV~-GaG~vG~~a~qlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~  242 (371)
T 1f8f_A          184 NALKVTPASSFVTW-GAGAVGLSALLAAKVCGASIIIAVD--IVESRLELAKQLGATHVINS  242 (371)
T ss_dssp             TTTCCCTTCEEEEE-SCSHHHHHHHHHHHHHTCSEEEEEE--SCHHHHHHHHHHTCSEEEET
T ss_pred             hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCCEEecC
Confidence            45567888775555 5799999999999999985444442  35778888899999765543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=88.48  E-value=4.9  Score=33.26  Aligned_cols=55  Identities=22%  Similarity=0.225  Sum_probs=42.7

Q ss_pred             CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ..+.++++.+|...+|..|.+++..++.+|.+++++..   +..+++.++.+|++.+.
T Consensus       162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~~  216 (343)
T 2eih_A          162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADETV  216 (343)
T ss_dssp             SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred             cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence            46778888777777799999999999999997655543   46777778888987543

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=88.46  E-value=4.1  Score=33.77  Aligned_cols=52  Identities=29%  Similarity=0.325  Sum_probs=40.7

Q ss_pred             CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +|.+.+|.+.+|..|.+.+..|+.+|.+++++.   .+..+++.++.+|++.+..
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~  201 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTA---SRNETIEWTKKMGADIVLN  201 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEC---CSHHHHHHHHHHTCSEEEC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCcEEEE
Confidence            677767776889999999999999999655543   3567888888899876553

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=88.42  E-value=6.6  Score=32.67  Aligned_cols=57  Identities=25%  Similarity=0.386  Sum_probs=44.0

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.++++.+|...+|..|.+++..++..|.+++++..   +..+++.++.+|++.+.
T Consensus       164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~  220 (351)
T 1yb5_A          164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF  220 (351)
T ss_dssp             TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred             HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence            3566788888777777799999999999999987655542   46677788889987554

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=88.35  E-value=5  Score=31.73  Aligned_cols=55  Identities=20%  Similarity=0.329  Sum_probs=37.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|--|.+++......|.++++....+..  ....+.++..|.++..+.
T Consensus         4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (258)
T 3oid_A            4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK   60 (258)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            3677888888999999999988899988776433211  122344555666665554

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=88.32  E-value=4.9  Score=31.83  Aligned_cols=55  Identities=18%  Similarity=0.176  Sum_probs=36.3

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|--|.++|......|.+++++..... .....+.++..|.++..+.
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   66 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVG   66 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            467788889999999999998889998766543211 1122334555566665543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=88.30  E-value=3.1  Score=34.69  Aligned_cols=58  Identities=17%  Similarity=0.151  Sum_probs=43.1

Q ss_pred             CCCCCC-CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEE
Q 043209           64 GLITPG-KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLIL  121 (221)
Q Consensus        64 g~~~~g-~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~  121 (221)
                      +.+.+| .+.+|...+|..|.+....|+.+|.+.++++..... ..+.+.++.+|++.+.
T Consensus       162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi  221 (364)
T 1gu7_A          162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI  221 (364)
T ss_dssp             SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred             hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence            567888 776666667999999999999999987777754333 3445667889987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=88.29  E-value=5.9  Score=32.78  Aligned_cols=58  Identities=26%  Similarity=0.265  Sum_probs=43.3

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +...+.++++.+|+..+|..|.+++..++.. |.+++++..   +..+++.++.+|++.+..
T Consensus       164 ~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~  222 (347)
T 1jvb_A          164 RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVIN  222 (347)
T ss_dssp             HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred             HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEec
Confidence            3456778888777777779999999999999 997554432   467777788899876543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=88.18  E-value=4.1  Score=32.18  Aligned_cols=55  Identities=11%  Similarity=0.087  Sum_probs=36.3

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++..+|+.++|--|.++|......|.+++++-.... .....+.++..|.++..+.
T Consensus        12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   67 (256)
T 3gaf_A           12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE   67 (256)
T ss_dssp             TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            367788888899999999988888988666543321 1122344555666665544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=88.12  E-value=5  Score=31.87  Aligned_cols=54  Identities=22%  Similarity=0.033  Sum_probs=35.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|-.|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   86 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV   86 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEE
Confidence            567888899999999999988889886666533211 112233444565555443

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=88.09  E-value=5.1  Score=32.92  Aligned_cols=56  Identities=25%  Similarity=0.327  Sum_probs=42.8

Q ss_pred             cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ...+.++++.+|+..+|..|.+++..++..|.+++++..   +..+++.++.+|++.+.
T Consensus       140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~  195 (333)
T 1wly_A          140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTI  195 (333)
T ss_dssp             TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred             hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence            556788888677666799999999999999987665543   45677777788987554

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=88.09  E-value=5.2  Score=31.94  Aligned_cols=55  Identities=22%  Similarity=0.212  Sum_probs=36.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|--|.++|......|.+++++..... .....+.++..|.++..+.
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   59 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV   59 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence            356788888899999999998888988666543311 1122344555677666543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=88.08  E-value=5.7  Score=32.48  Aligned_cols=56  Identities=25%  Similarity=0.278  Sum_probs=43.1

Q ss_pred             cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ...+.++++.+|+..+|..|.+++..++..|.+++++..   +..+++.++.+|++.+.
T Consensus       135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~  190 (327)
T 1qor_A          135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVI  190 (327)
T ss_dssp             TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred             hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence            566788888677777899999999999999987665543   46677777788987554

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=87.93  E-value=4.7  Score=31.39  Aligned_cols=54  Identities=19%  Similarity=0.091  Sum_probs=36.7

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|.-|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLV   60 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence            567888888999999999988889987766543211 222344555666665543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=87.91  E-value=5.4  Score=31.90  Aligned_cols=54  Identities=19%  Similarity=0.187  Sum_probs=35.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+..+|-.|.+++......|.+++++......  ....+.++..|.++..+.
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   85 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK   85 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEE
Confidence            567888888999999999988889887766543211  112344555666655443

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=87.90  E-value=8.3  Score=30.12  Aligned_cols=53  Identities=15%  Similarity=0.177  Sum_probs=35.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +..+|+.++|.-|.+++......|.+++++.... .....+.++..|.++..+.
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~   60 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVP-APEAEAAIRNLGRRVLTVK   60 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC-CHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc-hhHHHHHHHhcCCcEEEEE
Confidence            5678899999999999999888998876664332 1222224555666665543

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=87.85  E-value=3.5  Score=33.42  Aligned_cols=32  Identities=28%  Similarity=0.257  Sum_probs=25.3

Q ss_pred             CeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGN--TGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN--~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+..+|.  -|.++|......|.+++++..
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r   65 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ   65 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC
Confidence            66788888877  999999988888988666543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=87.81  E-value=6.9  Score=31.23  Aligned_cols=55  Identities=18%  Similarity=0.171  Sum_probs=37.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++..+|+.++|--|.++|......|.++++......  .....+.++..|.++..+.
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~   87 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR   87 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            367788888999999999998889998776643321  1223344556676666554

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=87.76  E-value=4.4  Score=32.47  Aligned_cols=54  Identities=19%  Similarity=0.104  Sum_probs=35.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|--|.++|......|.+++++..... .....+.++..|.++..+.
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   79 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS   79 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            56789999999999999998888988666543311 1122344555566665543

>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}

Probab=87.76  E-value=9.1  Score=30.43  Aligned_cols=47  Identities=6%  Similarity=-0.030  Sum_probs=35.0

Q ss_pred             hHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCC
Q 043209          163 TTGPEIWEGTR--GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPA  211 (221)
Q Consensus       163 t~~~Ei~~q~~--~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~  211 (221)
                      ....+++++.+  ..||+|||  .+..++.|+..++++.+    .++.|+|.+..
T Consensus       178 ~~~~~~l~~~~~~~~~~ai~~--~~d~~A~g~~~al~~~g~~vP~di~vig~D~~  230 (295)
T 3hcw_A          178 NYMQNLHTRLKDPNIKQAIIS--LDAMLHLAILSVLYELNIEIPKDVMTATFNDS  230 (295)
T ss_dssp             HHHHHHHHHHTCTTSCEEEEE--SSHHHHHHHHHHHHHTTCCTTTTEEEEEECCS
T ss_pred             HHHHHHHhhcccCCCCcEEEE--CChHHHHHHHHHHHHcCCCCCCceEEEEeCCh
Confidence            34556666552  36899986  56778899999999987    37889998753

>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2

Probab=87.74  E-value=3.2  Score=32.13  Aligned_cols=75  Identities=19%  Similarity=0.306  Sum_probs=53.6

Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 043209           43 EPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM-------PA--FMSLEKRIILQ  113 (221)
Q Consensus        43 ~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~l~  113 (221)
                      +|.--+=+......+++|.+.+.    +..||.+++|.++..+.-..  -| +.++|-       |.  ..+++..+.|+
T Consensus        30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~  102 (206)
T 1t57_A           30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL  102 (206)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence            45556677788888899999885    56555556699876655422  34 666665       33  35788999999


Q ss_pred             HcCCEEEEeCC
Q 043209          114 AYGAQLILTNA  124 (221)
Q Consensus       114 ~~Ga~V~~v~~  124 (221)
                      ..|.+|+.-..
T Consensus       103 ~~G~~V~t~tH  113 (206)
T 1t57_A          103 ERGVNVYAGSH  113 (206)
T ss_dssp             HHTCEEECCSC
T ss_pred             hCCCEEEEeec
Confidence            99999997654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=87.68  E-value=5.7  Score=31.64  Aligned_cols=54  Identities=20%  Similarity=0.178  Sum_probs=37.1

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +..+|+.++|--|.++|......|.++++......  .....+.++..|.++..+.
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (269)
T 4dmm_A           29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK   84 (269)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEE
Confidence            66788888899999999998889998877654321  1223344556676666554

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=87.68  E-value=5.8  Score=32.01  Aligned_cols=54  Identities=19%  Similarity=0.204  Sum_probs=37.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|--|.++|......|.+++++.....  .....+.++..|.++..+.
T Consensus        48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~  103 (291)
T 3ijr_A           48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP  103 (291)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE
Confidence            67788999999999999998889998776654421  1122334555666666554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=87.67  E-value=8.3  Score=29.87  Aligned_cols=32  Identities=25%  Similarity=0.379  Sum_probs=25.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      +++.+|+.++|.-|.+++......|.+++++.
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~   45 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGASVVLLG   45 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence            36678888889999999988888888766554

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=87.67  E-value=1.4  Score=38.17  Aligned_cols=55  Identities=27%  Similarity=0.338  Sum_probs=45.1

Q ss_pred             CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ..+.+|++.+|...+|..|.+++..|+.+|.+.+++.   .+..+++.++.+|++.+.
T Consensus       216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~---~~~~~~~~~~~lGa~~~i  270 (447)
T 4a0s_A          216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVV---SSAQKEAAVRALGCDLVI  270 (447)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTTCCCEE
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHhcCCCEEE
Confidence            5678888866666679999999999999999877766   367888889999997654

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=87.41  E-value=7.3  Score=32.47  Aligned_cols=55  Identities=20%  Similarity=0.185  Sum_probs=41.1

Q ss_pred             CCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           64 GLITPGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        64 g~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      ..+.+|.+.+|.. .|..|......|+.+ |.+++++.   .+..+++.++.+||+.+.-
T Consensus       182 ~~~~~g~~VlV~G-aG~vG~~avqlak~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~vi~  237 (359)
T 1h2b_A          182 RTLYPGAYVAIVG-VGGLGHIAVQLLKVMTPATVIALD---VKEEKLKLAERLGADHVVD  237 (359)
T ss_dssp             TTCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEE---SSHHHHHHHHHTTCSEEEE
T ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEe---CCHHHHHHHHHhCCCEEEe
Confidence            5677887755554 489999999999999 98744443   2577888899999976553

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=87.37  E-value=3.4  Score=33.20  Aligned_cols=54  Identities=19%  Similarity=0.241  Sum_probs=37.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +..+|+.++|--|.++|......|.+++++...+.  .....+.++..|.++..+.
T Consensus        30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (280)
T 4da9_A           30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR   85 (280)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            56788888999999999998889998777653321  1222344556676666554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=87.36  E-value=6.2  Score=30.87  Aligned_cols=32  Identities=28%  Similarity=0.262  Sum_probs=26.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+..+|..|.+++......|.+++++..
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r   39 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAAR   39 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            56789999999999999998888988666543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=87.32  E-value=6.1  Score=31.37  Aligned_cols=55  Identities=24%  Similarity=0.210  Sum_probs=37.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|.-|.++|......|.+++++......  ....+.++..|.++..+.
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   85 (271)
T 4iin_A           29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIK   85 (271)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEE
Confidence            3667888888999999999988899987776653321  122344556666665554

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=87.25  E-value=5.5  Score=33.05  Aligned_cols=56  Identities=23%  Similarity=0.265  Sum_probs=41.6

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|++.+|.. +|..|.+++..|+.+|.+ ++.+.  .+..+++.++.+|++.+.
T Consensus       162 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~-Vi~~~--~~~~~~~~~~~lGa~~~~  217 (352)
T 1e3j_A          162 RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAF-VVCTA--RSPRRLEVAKNCGADVTL  217 (352)
T ss_dssp             HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCE-EEEEE--SCHHHHHHHHHTTCSEEE
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCE-EEEEc--CCHHHHHHHHHhCCCEEE
Confidence            444577887755554 699999999999999998 44332  357788888999997544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=87.24  E-value=9.1  Score=29.86  Aligned_cols=52  Identities=13%  Similarity=0.197  Sum_probs=33.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHc--CCEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYK-LILVMPAFMSLEKRIILQAY--GAQLILT  122 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~-~~ivvp~~~~~~~~~~l~~~--Ga~V~~v  122 (221)
                      ++.+|+.++|--|.+++......|.+ ++++. .+.....++.++..  +.++..+
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~-r~~~~~~~~~l~~~~~~~~~~~~   60 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAINPKVNITFH   60 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SSCCHHHHHHHHHHCTTSEEEEE
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEe-cCchHHHHHHHHHhCCCceEEEE
Confidence            56788888899999999998888987 44443 33333444444433  4454443

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=87.17  E-value=4.6  Score=32.24  Aligned_cols=33  Identities=27%  Similarity=0.275  Sum_probs=27.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      +++.+|+.++|--|.++|......|.+++++-.
T Consensus        10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r   42 (281)
T 3s55_A           10 GKTALITGGARGMGRSHAVALAEAGADIAICDR   42 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC
Confidence            367788888999999999999999998776654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=87.10  E-value=6.1  Score=32.34  Aligned_cols=55  Identities=16%  Similarity=0.181  Sum_probs=37.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----------CCCHHHHHHHHHcCCEEEEeCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPA-----------FMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~-----------~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +..+|+.++|--|.++|......|.+++++...           .......+.++..|.++..+..
T Consensus        28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (322)
T 3qlj_A           28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS   93 (322)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEEC
Confidence            667888888999999999988889987776432           1112334556666777766544

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=87.01  E-value=6  Score=31.11  Aligned_cols=32  Identities=19%  Similarity=0.303  Sum_probs=26.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      +..+|+.++|.-|.+++......|.+++++..
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   34 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADL   34 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888999999999988888988666543

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=86.93  E-value=1.5  Score=36.01  Aligned_cols=58  Identities=22%  Similarity=0.191  Sum_probs=43.3

Q ss_pred             HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           59 DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        59 ~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      .+.+...+.+|.+.+|... |..|.+....|+.+|.+++++.    +..+++.++.+|++.+.
T Consensus       133 ~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~  190 (315)
T 3goh_A          133 QAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY  190 (315)
T ss_dssp             HHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred             HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence            3446677888887555555 9999999999999999766665    33466677889987654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=86.92  E-value=6.4  Score=31.25  Aligned_cols=73  Identities=16%  Similarity=0.257  Sum_probs=45.7

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK  141 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~  141 (221)
                      +++.+|+.++|--|.++|......|.++++......  .....+.++..|.++..+..+ .+.++..+..++..++
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            366788888899999999998889998877654321  122344566677777665433 1233344444444443

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=86.91  E-value=7.5  Score=30.70  Aligned_cols=31  Identities=39%  Similarity=0.357  Sum_probs=25.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      +..+|+..+|.-|.+++......|.+++++.
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   44 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVD   44 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence            5678888899999999998888888766654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=86.73  E-value=4.9  Score=32.36  Aligned_cols=32  Identities=22%  Similarity=0.132  Sum_probs=26.2

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      +..+|+.++|--|.++|......|.+++++-.
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r   60 (283)
T 3v8b_A           29 PVALITGAGSGIGRATALALAADGVTVGALGR   60 (283)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            56788888999999999988888987766543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=86.70  E-value=6.5  Score=31.39  Aligned_cols=53  Identities=11%  Similarity=0.109  Sum_probs=34.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILT  122 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v  122 (221)
                      ++.+|+..+|.-|.+++......|.+++++...... ....+.++..|.++..+
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~   76 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR   76 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence            567888899999999999988889887665433111 11123344445555443

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=86.68  E-value=3.4  Score=32.62  Aligned_cols=55  Identities=22%  Similarity=0.315  Sum_probs=34.3

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|--|.++|......|.+++++...... ....+.++..|.++..+.
T Consensus         6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   61 (257)
T 3imf_A            6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ   61 (257)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            3567888888999999999988889886665432111 112233344455555443

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=86.64  E-value=7.6  Score=32.11  Aligned_cols=59  Identities=20%  Similarity=0.321  Sum_probs=42.7

Q ss_pred             HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +.+...+.+|++.+|...+|..|.+++..++..|.+++++...   ..+++.++.+|++.+.
T Consensus       161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~~  219 (347)
T 2hcy_A          161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVFI  219 (347)
T ss_dssp             HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEEE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceEE
Confidence            3444457788887777777999999999999999976665533   3345666778987543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=86.62  E-value=7.4  Score=30.36  Aligned_cols=55  Identities=18%  Similarity=0.181  Sum_probs=37.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|--|.+++......|.++++......  .....+.++..|.++..+.
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   60 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ   60 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            356688888899999999998889998877654321  1222344566676665554

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=86.62  E-value=8.8  Score=31.81  Aligned_cols=57  Identities=28%  Similarity=0.411  Sum_probs=43.0

Q ss_pred             HcCCCCCC--CeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH-cCCEEEE
Q 043209           62 EKGLITPG--KTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQA-YGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g--~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~-~Ga~V~~  121 (221)
                      +.+.+.+|  ++.+|+..+|..|.+++..++..|. +++++..   +..+++.++. +|++.+.
T Consensus       152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~  212 (357)
T 2zb4_A          152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAI  212 (357)
T ss_dssp             HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEE
T ss_pred             HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEE
Confidence            45667788  8877777779999999999999998 6655543   3567777766 8986544

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=86.49  E-value=7.2  Score=30.80  Aligned_cols=54  Identities=22%  Similarity=0.192  Sum_probs=37.3

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|--|.+++......|.++++....+.  .....+.++..|.++..+.
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~   82 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLS   82 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEE
Confidence            56688888899999999999889998877664432  1223445556666665543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=86.48  E-value=5.2  Score=31.09  Aligned_cols=32  Identities=19%  Similarity=0.200  Sum_probs=25.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+.++|..|.+++......|.+++++..
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r   43 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDI   43 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcC
Confidence            56688888899999999988888887666553

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=86.45  E-value=7  Score=31.62  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=27.1

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      +..+|+.+++--|.++|......|.+++++-.
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~   60 (299)
T 3t7c_A           29 KVAFITGAARGQGRSHAITLAREGADIIAIDV   60 (299)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEec
Confidence            67788889999999999999889998877653

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=86.30  E-value=8.3  Score=30.80  Aligned_cols=31  Identities=10%  Similarity=0.242  Sum_probs=22.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      ++.+|+.++|--|.++|......|.+++++.
T Consensus        13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~   43 (311)
T 3o26_A           13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTC   43 (311)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cEEEEecCCchHHHHHHHHHHHCCCEEEEEe
Confidence            5667888888888888888777777655544

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=86.05  E-value=6.7  Score=30.92  Aligned_cols=32  Identities=31%  Similarity=0.460  Sum_probs=26.2

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      +++.+|+..+|..|.+++......|.+++++.
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   38 (262)
T 1zem_A            7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLD   38 (262)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            35678888999999999998888898866654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=85.98  E-value=6.7  Score=32.44  Aligned_cols=57  Identities=32%  Similarity=0.399  Sum_probs=42.1

Q ss_pred             HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +.+...+ +|++.+|... |..|.+++..|+.+|. +++++..   +..+++.++.+|++.+.
T Consensus       160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~  217 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVI  217 (348)
T ss_dssp             HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred             HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence            3455566 8877566555 9999999999999998 6555432   47788888899997554

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=85.90  E-value=8  Score=30.32  Aligned_cols=32  Identities=16%  Similarity=0.225  Sum_probs=25.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+..+|.-|.+++......|.+++++..
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   34 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY   34 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888999999999988888987666543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=85.78  E-value=5.1  Score=33.73  Aligned_cols=58  Identities=28%  Similarity=0.311  Sum_probs=43.5

Q ss_pred             HHHcCC-CCCCCeEEEeeCCChHHHHHHHHHHHcC-CeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           60 AEEKGL-ITPGKTVLIECTSGNTGIGMACFAAAKG-YKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        60 a~~~g~-~~~g~~~vv~assGN~~~alA~~a~~~g-~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +.+... +.+|.+.+|.. +|..|.+.+..|+.+| .+++++.+   +..+++.++.+|++.+.
T Consensus       186 al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi  245 (380)
T 1vj0_A          186 AFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTL  245 (380)
T ss_dssp             HHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred             HHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEE
Confidence            344556 77887766666 8999999999999999 46655543   56788888999997554

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=85.75  E-value=6.8  Score=30.51  Aligned_cols=32  Identities=22%  Similarity=0.272  Sum_probs=26.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+..+|..|.+++......|.+++++..
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r   36 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYA   36 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888899999999988888988776654

>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}

Probab=85.66  E-value=12  Score=29.53  Aligned_cols=46  Identities=17%  Similarity=0.121  Sum_probs=35.3

Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC-CcEEEEEeCC
Q 043209          163 TTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNP-EIKVYGVEPA  211 (221)
Q Consensus       163 t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~-~~kvigVe~~  211 (221)
                      ....+++++- +++|+||+.  +..++.|+..++++.+. ++.|+|++..
T Consensus       184 ~~~~~~l~~~-~~~~ai~~~--~d~~a~g~~~al~~~g~~di~vig~d~~  230 (293)
T 3l6u_A          184 RVMRQVIDSG-IPFDAVYCH--NDDIAMGVLEALKKAKISGKIVVGIDGN  230 (293)
T ss_dssp             HHHHHHHHTT-CCCSEEEES--SHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHhC-CCCCEEEEC--CchHHHHHHHHHHhCCCCCeEEEEecCC
Confidence            3455666554 579999975  66778899999999875 8999999754

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=85.57  E-value=6.1  Score=31.41  Aligned_cols=32  Identities=31%  Similarity=0.340  Sum_probs=27.1

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      ++..+|+.++|--|.++|......|.+++++-
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   44 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGADIIAVD   44 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence            36778998999999999999988999877765

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=85.50  E-value=7.8  Score=30.74  Aligned_cols=33  Identities=24%  Similarity=0.371  Sum_probs=26.9

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++..+|+..+|..|.+++......|.+++++..
T Consensus        21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r   53 (267)
T 1vl8_A           21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR   53 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            366788889999999999998888988666553

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=85.36  E-value=5.7  Score=31.77  Aligned_cols=56  Identities=16%  Similarity=0.030  Sum_probs=40.9

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +++.+|+.++|--|.++|......|.+++++-.........+.++..|.++..+..
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   86 (273)
T 3uf0_A           31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVA   86 (273)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEe
Confidence            36778888999999999999999999877766332223445566777888876644

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=85.20  E-value=9.7  Score=31.29  Aligned_cols=57  Identities=25%  Similarity=0.230  Sum_probs=42.9

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQ-AYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~-~~Ga~V~~  121 (221)
                      +...+.+|++.+|...+|..|.+++..++..|.+++++.   .+..+++.++ .+|++.+.
T Consensus       149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~---~~~~~~~~~~~~~g~~~~~  206 (345)
T 2j3h_A          149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSA---GSKEKVDLLKTKFGFDDAF  206 (345)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHHTSCCSEEE
T ss_pred             HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHHcCCceEE
Confidence            445677888867777779999999999999998755544   2467777777 68986544

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=85.20  E-value=7.5  Score=31.48  Aligned_cols=53  Identities=19%  Similarity=0.197  Sum_probs=34.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcC-CEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYG-AQLILT  122 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~G-a~V~~v  122 (221)
                      ++.+|+.++|--|.++|......|.+++++..... .....+.++..| .++..+
T Consensus        42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   96 (293)
T 3rih_A           42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV   96 (293)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEE
Confidence            56788888899999999988888988777654321 223334444444 344433

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=85.09  E-value=3.5  Score=34.63  Aligned_cols=54  Identities=24%  Similarity=0.216  Sum_probs=41.0

Q ss_pred             CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +.+|++.+|...+|..|.+++..|+.+|.+++++.    +..+++.++.+|++.+.-.
T Consensus       181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~  234 (375)
T 2vn8_A          181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDY  234 (375)
T ss_dssp             TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEEC
Confidence            67888766666689999999999999998765543    2356777889999866543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=85.02  E-value=6.4  Score=31.39  Aligned_cols=33  Identities=24%  Similarity=0.270  Sum_probs=27.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++..+|+.++|--|.++|......|.+++++-.
T Consensus        15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r   47 (280)
T 3pgx_A           15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDI   47 (280)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence            367788889999999999999889998777653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=84.90  E-value=9.6  Score=30.34  Aligned_cols=54  Identities=22%  Similarity=0.185  Sum_probs=35.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCC---EEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGA---QLILT  122 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga---~V~~v  122 (221)
                      +++.+|+.++|--|.++|......|.+++++-.... .....+.++..|.   ++..+
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~   68 (281)
T 3svt_A           11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE   68 (281)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEE
Confidence            367788889999999999998888998766543211 1122344555554   55444

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=84.90  E-value=3.5  Score=34.72  Aligned_cols=58  Identities=21%  Similarity=0.273  Sum_probs=41.8

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      .+...+.+|.+.+|. +.|..|.+.+..|+.+|.+-++.+.  .+..+++.++.+|++.+.
T Consensus       186 ~~~~~~~~g~~VlV~-GaG~vG~~a~q~a~~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi  243 (378)
T 3uko_A          186 WNTAKVEPGSNVAIF-GLGTVGLAVAEGAKTAGASRIIGID--IDSKKYETAKKFGVNEFV  243 (378)
T ss_dssp             HTTTCCCTTCCEEEE-CCSHHHHHHHHHHHHHTCSCEEEEC--SCTTHHHHHHTTTCCEEE
T ss_pred             HhhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHcCCcEEE
Confidence            355667888775555 5699999999999999994444442  245677788899997654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=84.82  E-value=6.4  Score=31.45  Aligned_cols=32  Identities=25%  Similarity=0.310  Sum_probs=27.2

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      ++..+|+.+++--|.++|......|.+++++-
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~   42 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVD   42 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence            36778999999999999999999999877764

>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}

Probab=84.73  E-value=5.6  Score=32.97  Aligned_cols=64  Identities=22%  Similarity=0.113  Sum_probs=43.5

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHH----HcCCEEEEeCC
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQ----AYGAQLILTNA  124 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~----~~Ga~V~~v~~  124 (221)
                      ++.|.+.+|.+..+..-.+|.++|+..++.++|++++++.|+..  +...++.++    ..|+.+..+..
T Consensus       138 e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d  207 (307)
T 3tpf_A          138 EWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYD  207 (307)
T ss_dssp             HTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred             HHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence            34565543555445555689999999999999999999999863  333333333    66777766543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=84.67  E-value=9.4  Score=29.96  Aligned_cols=72  Identities=15%  Similarity=0.081  Sum_probs=49.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK  141 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~  141 (221)
                      +..+|+.++|.-|.++|......|.+++++-... ......+.++..|.++..+..+ .+.++..+..++..++
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            6678888999999999999999999877766442 2344456677778888766543 1334444555555444

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=84.59  E-value=5.7  Score=31.69  Aligned_cols=32  Identities=19%  Similarity=0.192  Sum_probs=25.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      +..+|+.++|--|.++|......|.+++++..
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r   60 (270)
T 3ftp_A           29 QVAIVTGASRGIGRAIALELARRGAMVIGTAT   60 (270)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            56788888899999999988888987766553

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=84.57  E-value=8.6  Score=30.09  Aligned_cols=71  Identities=15%  Similarity=0.174  Sum_probs=46.4

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhh
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNK  141 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~  141 (221)
                      ++.+|+..+|..|.+++......|.+++++.... .....+.++..|.++..+..+- +.++..+..++..++
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-PAPALAEIARHGVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-CHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-hHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5678888899999999999988999876665433 3445566666787777665431 233334444444433

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=84.52  E-value=6.8  Score=30.95  Aligned_cols=32  Identities=22%  Similarity=0.367  Sum_probs=25.9

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      +++.+|+.++|--|.++|......|.+++++.
T Consensus        10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~   41 (262)
T 3pk0_A           10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAG   41 (262)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            36678888889999999998888898776654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=84.38  E-value=3.7  Score=34.05  Aligned_cols=57  Identities=18%  Similarity=0.155  Sum_probs=40.7

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      .++..+.+|.+.+| .++|..|.+.+..|+.+|.+++++..   +..+++.++.+|++.+.
T Consensus       169 l~~~~~~~g~~VlV-~GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v~  225 (348)
T 3two_A          169 LKFSKVTKGTKVGV-AGFGGLGSMAVKYAVAMGAEVSVFAR---NEHKKQDALSMGVKHFY  225 (348)
T ss_dssp             HHHTTCCTTCEEEE-ESCSHHHHHHHHHHHHTTCEEEEECS---SSTTHHHHHHTTCSEEE
T ss_pred             HHhcCCCCCCEEEE-ECCcHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHhcCCCeec
Confidence            33345778877555 45699999999999999997555543   34466677889987654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=84.37  E-value=12  Score=29.63  Aligned_cols=32  Identities=22%  Similarity=0.318  Sum_probs=26.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+..+|..|.+++......|.+++++..
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r   64 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGLKVVGCAR   64 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence            56788989999999999998888988766653

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=84.35  E-value=8.3  Score=31.11  Aligned_cols=55  Identities=13%  Similarity=0.191  Sum_probs=35.1

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC---CHHHHHHHHHcCCEEEEeCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM---SLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~---~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++.+|+.++|--|.++|......|.++++......   .....+.++..|.++..+..
T Consensus        50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (294)
T 3r3s_A           50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG  107 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEe
Confidence            67788889999999999988888988666543211   11122334455666655543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=84.18  E-value=4.9  Score=32.22  Aligned_cols=54  Identities=15%  Similarity=0.049  Sum_probs=33.7

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|..|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   99 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA   99 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEE
Confidence            567888899999999998888888877764322111 111233444466555443

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=84.13  E-value=7.1  Score=30.93  Aligned_cols=31  Identities=10%  Similarity=0.188  Sum_probs=25.3

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      +..+|+..+|.-|.+++......|.+++++.
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~   56 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSH   56 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence            5668888889999999998888898876655

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=83.99  E-value=14  Score=29.39  Aligned_cols=70  Identities=11%  Similarity=0.103  Sum_probs=44.5

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      ++.|||.+++--|+++|......|.++++.-   .+..+...+...+.++..+..+ .+.++..+..++..++.
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   73 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFID---IDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL   73 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEe---CCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5668888999999999999999998876653   2455556666566655544322 12344444444444443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=83.97  E-value=8.5  Score=30.60  Aligned_cols=33  Identities=27%  Similarity=0.311  Sum_probs=27.3

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++..+|+.+++--|.++|......|.+++++-.
T Consensus        11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A           11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            367788889999999999998889998777643

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=83.95  E-value=7.9  Score=30.74  Aligned_cols=33  Identities=27%  Similarity=0.265  Sum_probs=27.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      +++.+|+.++|--|.++|......|.+++++-.
T Consensus        10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~   42 (287)
T 3pxx_A           10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDI   42 (287)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcc
Confidence            367789999999999999999999998777653

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=83.93  E-value=9.6  Score=31.38  Aligned_cols=53  Identities=28%  Similarity=0.340  Sum_probs=39.1

Q ss_pred             CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           65 LITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        65 ~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      .+.+|++.+|... |..|.+++..++.+|.+++++.   .+..+++.++.+|++.+.
T Consensus       161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~  213 (339)
T 1rjw_A          161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVD---IGDEKLELAKELGADLVV  213 (339)
T ss_dssp             TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCSEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEe---CCHHHHHHHHHCCCCEEe
Confidence            4667777555555 7799999999999998654443   357788888889997543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=83.89  E-value=14  Score=28.88  Aligned_cols=52  Identities=23%  Similarity=0.222  Sum_probs=33.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~  123 (221)
                      +++.+|+.++|--|.+++......|.+++++-.   +..+.+ ..+.+|.++..+.
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~   58 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDI---NAEGAKAAAASIGKKARAIA   58 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHHCTTEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCceEEEE
Confidence            367788888899999999998888987665432   223222 2233455555543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=83.84  E-value=10  Score=29.75  Aligned_cols=33  Identities=30%  Similarity=0.422  Sum_probs=26.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      +++.+|+.++|.-|.+++......|.+++++..
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   39 (263)
T 3ai3_A            7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR   39 (263)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            356788889999999999998888987666543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=83.84  E-value=5.4  Score=32.08  Aligned_cols=31  Identities=26%  Similarity=0.410  Sum_probs=24.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEE
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILV   99 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~iv   99 (221)
                      +++.+|+.++|--|.++|......|.+++++
T Consensus         8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~   38 (280)
T 3tox_A            8 GKIAIVTGASSGIGRAAALLFAREGAKVVVT   38 (280)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            3667888888999999998888888875544

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=83.67  E-value=5.9  Score=30.52  Aligned_cols=32  Identities=31%  Similarity=0.322  Sum_probs=26.1

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+.++|..|.+++......|.++++...
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r   34 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGYALALGAR   34 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888899999999999889988666543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=83.63  E-value=11  Score=31.75  Aligned_cols=56  Identities=25%  Similarity=0.210  Sum_probs=41.4

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQAYGAQLI  120 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~~Ga~V~  120 (221)
                      .+...+.+|.+.+|. ++|..|...+..|+.+|. +++++.   .+..+++.++.+|++++
T Consensus       178 l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~i  234 (398)
T 2dph_A          178 CVSAGVKPGSHVYIA-GAGPVGRCAAAGARLLGAACVIVGD---QNPERLKLLSDAGFETI  234 (398)
T ss_dssp             HHHTTCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEE---SCHHHHHHHHTTTCEEE
T ss_pred             HHHcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEc---CCHHHHHHHHHcCCcEE
Confidence            345567888775554 569999999999999998 544443   35778888899999744

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=83.56  E-value=9.4  Score=30.82  Aligned_cols=33  Identities=21%  Similarity=0.214  Sum_probs=24.6

Q ss_pred             CeEEEeeCCC--hHHHHHHHHHHHcCCeEEEEecC
Q 043209           70 KTVLIECTSG--NTGIGMACFAAAKGYKLILVMPA  102 (221)
Q Consensus        70 ~~~vv~assG--N~~~alA~~a~~~g~~~~ivvp~  102 (221)
                      ++.+|+.++|  .-|.++|......|.+++++...
T Consensus        31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~   65 (296)
T 3k31_A           31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS   65 (296)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence            5667777776  78888888888889886665543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=83.55  E-value=6  Score=33.03  Aligned_cols=51  Identities=12%  Similarity=0.155  Sum_probs=38.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI  120 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~  120 (221)
                      |++.+|... |..|.+++..++.+|.+++++........+++.++.+|++.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v  231 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY  231 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence            777566665 999999999999999976666543223367778888999876

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=83.54  E-value=7.2  Score=31.92  Aligned_cols=31  Identities=19%  Similarity=0.222  Sum_probs=26.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      ++.+|+.++|--|.++|......|.+++++-
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~   77 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGADIVAID   77 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEe
Confidence            6778888889999999999888999887764

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=83.20  E-value=4.6  Score=33.64  Aligned_cols=50  Identities=18%  Similarity=0.206  Sum_probs=36.2

Q ss_pred             CeEEEeeCCChHHHHH-HHHH-HHcCCe-EEEEecCCCCHHHHHHHHHcCCEEE
Q 043209           70 KTVLIECTSGNTGIGM-ACFA-AAKGYK-LILVMPAFMSLEKRIILQAYGAQLI  120 (221)
Q Consensus        70 ~~~vv~assGN~~~al-A~~a-~~~g~~-~~ivvp~~~~~~~~~~l~~~Ga~V~  120 (221)
                      .+.+|... |..|... ...| +.+|.+ ++++.+......+++.++.+|++.+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v  226 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV  226 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence            66455554 9999999 8999 889997 6665544322337777889999876

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=83.13  E-value=8.8  Score=30.37  Aligned_cols=70  Identities=16%  Similarity=0.139  Sum_probs=48.6

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      ++.+|+.++|--|.++|......|.+++++.... .. ..+.++..++..+.++-. +.++..+...+..++.
T Consensus        28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~-~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   97 (260)
T 3gem_A           28 APILITGASQRVGLHCALRLLEHGHRVIISYRTE-HA-SVTELRQAGAVALYGDFS-CETGIMAFIDLLKTQT   97 (260)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC-CH-HHHHHHHHTCEEEECCTT-SHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh-HH-HHHHHHhcCCeEEECCCC-CHHHHHHHHHHHHHhc
Confidence            5668888899999999999888999877766443 22 244556677777777654 3455555666665554

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=82.95  E-value=12  Score=29.26  Aligned_cols=32  Identities=28%  Similarity=0.503  Sum_probs=25.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      +++.+|+..+|--|.+++......|.+++++.
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   35 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNG   35 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEe
Confidence            35668888889999999998888888766554

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=82.92  E-value=3  Score=34.26  Aligned_cols=57  Identities=25%  Similarity=0.362  Sum_probs=40.3

Q ss_pred             HcCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGK-TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~-~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ++..+.++. +.+|...+|..|.+++..|+.+|.+++++...   ..+++.++.+|++.+.
T Consensus       142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i  199 (328)
T 1xa0_A          142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVL  199 (328)
T ss_dssp             HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEE
T ss_pred             hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHcCCcEEE
Confidence            334566765 65666666999999999999999986665543   3455666779987554

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=82.71  E-value=13  Score=29.84  Aligned_cols=32  Identities=6%  Similarity=0.122  Sum_probs=26.2

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+.++|..|.+++......|.+++++..
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r   50 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASR   50 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            56788889999999999998888987666543

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=82.59  E-value=5.6  Score=33.31  Aligned_cols=57  Identities=23%  Similarity=0.200  Sum_probs=40.7

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|.+.+|. ++|..|.+.+..|+.+|.+-++.+.  .+..+++.++.+|++.+.
T Consensus       185 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi  241 (373)
T 1p0f_A          185 NTAKVTPGSTCAVF-GLGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATECL  241 (373)
T ss_dssp             TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred             hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEEE
Confidence            45567888775555 5799999999999999984343332  245677778889997544

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=82.56  E-value=3.3  Score=33.61  Aligned_cols=54  Identities=26%  Similarity=0.376  Sum_probs=39.8

Q ss_pred             cCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209           63 KGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI  120 (221)
Q Consensus        63 ~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~  120 (221)
                      .+ +.+|++.+|...+|..|.+++..++.+|.+++++...   ..+++.++.+|++.+
T Consensus       121 ~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~  174 (302)
T 1iz0_A          121 AQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR---PEKLALPLALGAEEA  174 (302)
T ss_dssp             TT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---GGGSHHHHHTTCSEE
T ss_pred             hc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhcCCCEE
Confidence            55 7788886666667999999999999999976665542   345555667887654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=82.53  E-value=11  Score=30.04  Aligned_cols=32  Identities=19%  Similarity=0.304  Sum_probs=26.3

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+.++|..|.+++......|.+++++..
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r   58 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASR   58 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            56788889999999999998888988666543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=82.45  E-value=13  Score=29.13  Aligned_cols=54  Identities=22%  Similarity=0.201  Sum_probs=34.3

Q ss_pred             CeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHH-HHcCCEEEEeC
Q 043209           70 KTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIIL-QAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l-~~~Ga~V~~v~  123 (221)
                      ++.+|+.++  +-.|.++|......|.+++++......  ...++.+ +.+|.++..+.
T Consensus        21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   79 (267)
T 3gdg_A           21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYK   79 (267)
T ss_dssp             CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCB
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEe
Confidence            566777777  788999998888889887776544332  2333333 23465655544

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=82.42  E-value=7.8  Score=30.39  Aligned_cols=73  Identities=14%  Similarity=0.134  Sum_probs=47.3

Q ss_pred             CCeEEEeeCC--ChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTS--GNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQA-YG-AQLILTNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~ass--GN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~-~G-a~V~~v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      +++.+|+..+  |.-|.++|......|.+++++.........++.+.. .| ..++.+|-. +.++..+...++.++.
T Consensus        14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVA-DDAQIDALFASLKTHW   90 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence            4677888866  889999999999999988777655444555555533 33 233444433 3455566666666654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=82.40  E-value=16  Score=28.90  Aligned_cols=51  Identities=20%  Similarity=0.217  Sum_probs=34.2

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTN  123 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~  123 (221)
                      ++.+|+.++|--|.++|......|.+++++-.   +..+++ ..+.+|.++..+.
T Consensus        28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~   79 (266)
T 3grp_A           28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGT---REDKLKEIAADLGKDVFVFS   79 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHHCSSEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHhCCceEEEE
Confidence            67788888899999999998888987666542   233332 2344566655543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=81.76  E-value=3.2  Score=34.12  Aligned_cols=56  Identities=21%  Similarity=0.346  Sum_probs=39.3

Q ss_pred             cCCCCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           63 KGLITPGK-TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        63 ~g~~~~g~-~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +..+.++. +.+|...+|..|.+++..|+.+|.+++++....   .+++.++.+|++.+.
T Consensus       144 ~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~---~~~~~~~~lGa~~v~  200 (330)
T 1tt7_A          144 QNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR---EAADYLKQLGASEVI  200 (330)
T ss_dssp             HTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS---STHHHHHHHTCSEEE
T ss_pred             hcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHHHHHHHcCCcEEE
Confidence            34466764 656666679999999999999999866665442   345566678886543

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=81.75  E-value=6.8  Score=32.80  Aligned_cols=57  Identities=25%  Similarity=0.246  Sum_probs=40.7

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|.+.+|. ++|..|.+.+..|+.+|.+-++.+.  .+..+++.++.+|++.+.
T Consensus       189 ~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi  245 (376)
T 1e3i_A          189 NTAKVTPGSTCAVF-GLGCVGLSAIIGCKIAGASRIIAID--INGEKFPKAKALGATDCL  245 (376)
T ss_dssp             TTSCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred             HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCcEEE
Confidence            45667888775555 4799999999999999984333332  245677778889997554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=81.57  E-value=7.1  Score=32.68  Aligned_cols=57  Identities=19%  Similarity=0.197  Sum_probs=40.6

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|++.+|.. +|..|.+++..|+.+|.+-++.+.  .+..+++.++.+|++.+.
T Consensus       185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi  241 (374)
T 2jhf_A          185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATECV  241 (374)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCceEe
Confidence            456678887755554 799999999999999984333332  245667777889987543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=81.46  E-value=13  Score=32.23  Aligned_cols=100  Identities=16%  Similarity=0.131  Sum_probs=63.2

Q ss_pred             CCCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCChHHHHHHHHHHH-cCCeEEEEecCCC-CH-----------
Q 043209           41 MMEPCSSVKDRIAFSMIKDAEEKGLIT-PGKTVLIECTSGNTGIGMACFAAA-KGYKLILVMPAFM-SL-----------  106 (221)
Q Consensus        41 ~~~ptGs~K~R~a~~~~~~a~~~g~~~-~g~~~vv~assGN~~~alA~~a~~-~g~~~~ivvp~~~-~~-----------  106 (221)
                      +.+|.|+++.  ....+.+.++++.+. .++..+|+.+++-.|+|+|..... .|.+++++-.+.. ..           
T Consensus        34 ~a~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~  111 (422)
T 3s8m_A           34 TTHPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNS  111 (422)
T ss_dssp             CCCHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHH
T ss_pred             cCCchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchh
Confidence            4556676553  334466666777763 457778888888899999999888 9998877653321 11           


Q ss_pred             -HHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209          107 -EKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus       107 -~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                       ...+.++..|.++..+..+ .+.++..+.+.+..++.
T Consensus       112 ~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~  149 (422)
T 3s8m_A          112 AAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM  149 (422)
T ss_dssp             HHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence             1235667789877765433 13344555555665554

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=81.13  E-value=7.4  Score=32.35  Aligned_cols=57  Identities=26%  Similarity=0.361  Sum_probs=41.3

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGY-KLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~-~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      .+...+.+|.+.+|. ++|..|.+.+..|+.+|. +++++.   .+..+++.++.+|++.+.
T Consensus       164 l~~~~~~~g~~VlV~-GaG~vG~~aiqlak~~Ga~~Vi~~~---~~~~~~~~a~~lGa~~vi  221 (356)
T 1pl8_A          164 CRRGGVTLGHKVLVC-GAGPIGMVTLLVAKAMGAAQVVVTD---LSATRLSKAKEIGADLVL  221 (356)
T ss_dssp             HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEE---SCHHHHHHHHHTTCSEEE
T ss_pred             HHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEC---CCHHHHHHHHHhCCCEEE
Confidence            344457788775554 569999999999999998 444443   357788888999997443

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=81.08  E-value=7.9  Score=32.35  Aligned_cols=57  Identities=19%  Similarity=0.292  Sum_probs=40.7

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +...+.+|++.+|. ++|..|.+.+..|+.+|.+-++.+.  .+..+++.++.+|++.+.
T Consensus       186 ~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi  242 (374)
T 1cdo_A          186 NTAKVEPGSTCAVF-GLGAVGLAAVMGCHSAGAKRIIAVD--LNPDKFEKAKVFGATDFV  242 (374)
T ss_dssp             TTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCCEEE
T ss_pred             hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHhCCceEE
Confidence            45567788775555 4699999999999999984333332  245677778889997544

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=81.05  E-value=16  Score=30.01  Aligned_cols=61  Identities=20%  Similarity=0.260  Sum_probs=39.9

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAK-GYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      .+...+.+|.+ |+..++|..|...+..++.+ |.+++++.   .+..|++..+.+|++.+.-..+
T Consensus       156 l~~~~~~~g~~-VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~---~~~~r~~~~~~~Ga~~~i~~~~  217 (348)
T 4eez_A          156 IKVSGVKPGDW-QVIFGAGGLGNLAIQYAKNVFGAKVIAVD---INQDKLNLAKKIGADVTINSGD  217 (348)
T ss_dssp             HHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTSCCEEEEEE---SCHHHHHHHHHTTCSEEEEC-C
T ss_pred             ecccCCCCCCE-EEEEcCCCccHHHHHHHHHhCCCEEEEEE---CcHHHhhhhhhcCCeEEEeCCC
Confidence            34445678877 44456677776666667665 66655543   3577888999999987765443

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=81.05  E-value=14  Score=29.16  Aligned_cols=32  Identities=13%  Similarity=0.276  Sum_probs=26.0

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+.++|-.|.+++......|.+++++..
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r   43 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYR   43 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888899999999988888887766654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=81.02  E-value=4.5  Score=33.05  Aligned_cols=53  Identities=26%  Similarity=0.369  Sum_probs=39.0

Q ss_pred             CCCCC-eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           66 ITPGK-TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        66 ~~~g~-~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      +.++. +.+|...+|..|.+....|+.+|.+++++...   ..+++.++.+|++-+.
T Consensus       143 ~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi  196 (324)
T 3nx4_A          143 IRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGR---ESTHGYLKSLGANRIL  196 (324)
T ss_dssp             CCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---GGGHHHHHHHTCSEEE
T ss_pred             cCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEE
Confidence            44432 44555566999999999999999987766643   4577778889997654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=80.66  E-value=16  Score=28.53  Aligned_cols=72  Identities=10%  Similarity=0.078  Sum_probs=44.2

Q ss_pred             CCeEEEeeCCCh--HHHHHHHHHHHcCCeEEEEecCCCCHHHHHH-HHHcCC---EEEEeCCCCChhHHHHHHHHHHhh
Q 043209           69 GKTVLIECTSGN--TGIGMACFAAAKGYKLILVMPAFMSLEKRII-LQAYGA---QLILTNAEMGIDEEFRIVEELLNK  141 (221)
Q Consensus        69 g~~~vv~assGN--~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~-l~~~Ga---~V~~v~~~~~~~~~~~~a~~~~~~  141 (221)
                      +++.+|+..+|.  -|.++|......|.+++++.........+.. .+..+.   .++.+|-. +.++..+..+++.++
T Consensus         7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-NDAEIETCFASIKEQ   84 (266)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-SSHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-CHHHHHHHHHHHHHH
Confidence            356688888877  9999999988899997776544333344333 334443   44444443 344555555555544

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=80.54  E-value=14  Score=28.33  Aligned_cols=25  Identities=20%  Similarity=0.127  Sum_probs=21.1

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGY   94 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~   94 (221)
                      +..+|+..+|..|.+++......|.
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~   27 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAAR   27 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcC
Confidence            4568888889999999988887887

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=80.47  E-value=11  Score=29.91  Aligned_cols=31  Identities=29%  Similarity=0.327  Sum_probs=25.4

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      ++.+|+..+|..|.+++......|.+++++.
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   37 (280)
T 1xkq_A            7 KTVIITGSSNGIGRTTAILFAQEGANVTITG   37 (280)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence            5678888889999999998888888766654

>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A

Probab=80.41  E-value=9.2  Score=31.63  Aligned_cols=61  Identities=16%  Similarity=0.118  Sum_probs=43.8

Q ss_pred             HHcCCCCCCCeEEEeeCC---ChHHHHHHHHHHHc-CCeEEEEecCC--CCHHHHHHHHHcCCEEEEeC
Q 043209           61 EEKGLITPGKTVLIECTS---GNTGIGMACFAAAK-GYKLILVMPAF--MSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~ass---GN~~~alA~~a~~~-g~~~~ivvp~~--~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      ++.|.+. |.+ |+..+-   +|.++|+..++.++ |++++++.|+.  .+..-++.++..|+++..+.
T Consensus       144 e~~g~l~-glk-va~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~  210 (306)
T 4ekn_B          144 REIGRID-GIK-IAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE  210 (306)
T ss_dssp             HHHSCST-TCE-EEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred             HHhCCcC-CCE-EEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence            3445443 344 444433   68999999999999 99999999985  45566667777888886654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=80.39  E-value=9.2  Score=29.55  Aligned_cols=32  Identities=16%  Similarity=0.275  Sum_probs=25.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+..+|..|.+++......|.+++++..
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r   34 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDL   34 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888999999999988888987666543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=80.35  E-value=12  Score=30.11  Aligned_cols=32  Identities=25%  Similarity=0.318  Sum_probs=25.8

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEec
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMP  101 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp  101 (221)
                      ++.+|+..+|..|.+++......|.+++++..
T Consensus        27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r   58 (297)
T 1xhl_A           27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGR   58 (297)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            56688888899999999888888887666543

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=80.13  E-value=14  Score=31.20  Aligned_cols=66  Identities=26%  Similarity=0.312  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHH-cCC-CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEE
Q 043209           51 RIAFSMIKDAEE-KGL-ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLI  120 (221)
Q Consensus        51 R~a~~~~~~a~~-~g~-~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~  120 (221)
                      |+..+.+..+.+ .|. -..|++ |+..+.||-|..+|..++.+|.+++ +...  +..+.+..+.+|++.+
T Consensus       155 ~Gv~~~~~~~~~~~G~~~L~Gkt-V~I~G~GnVG~~~A~~l~~~GakVv-vsD~--~~~~~~~a~~~ga~~v  222 (355)
T 1c1d_A          155 VGVFEAMKATVAHRGLGSLDGLT-VLVQGLGAVGGSLASLAAEAGAQLL-VADT--DTERVAHAVALGHTAV  222 (355)
T ss_dssp             HHHHHHHHHHHHHTTCCCSTTCE-EEEECCSHHHHHHHHHHHHTTCEEE-EECS--CHHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCE-EEEECcCHHHHHHHHHHHHCCCEEE-EEeC--CccHHHHHHhcCCEEe
Confidence            466666666654 343 235555 8888999999999999999999877 4432  2333444455777644

>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}

Probab=80.08  E-value=20  Score=28.24  Aligned_cols=37  Identities=19%  Similarity=0.271  Sum_probs=30.3

Q ss_pred             CCCCEEEEccCchhHHHHHHHHHHhcC----CCcEEEEEeCCC
Q 043209          174 GQVDIFVSGIGTGGTVSGVGNFLKKKN----PEIKVYGVEPAE  212 (221)
Q Consensus       174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~----~~~kvigVe~~~  212 (221)
                      ++||+|||.  +..++.|+..++++.+    .++.|+|.+...
T Consensus       184 ~~~~ai~~~--~d~~A~g~~~al~~~g~~vP~di~vig~D~~~  224 (289)
T 3k9c_A          184 TPPTAVVAF--NDRCATGVLDLLVRSGRDVPADISVVGYDDSR  224 (289)
T ss_dssp             SCCSEEEES--SHHHHHHHHHHHHHTTCCTTTTCEEEEEECCT
T ss_pred             CCCCEEEEC--ChHHHHHHHHHHHHcCCCCCCceEEEEECCHH
Confidence            579999975  5677889999999987    379999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	221
d1z7wa1	320	c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (C	2e-57
d1jbqa_	355	c.79.1.1 (A:) Cystathionine beta-synthase {Human (	4e-50
d1y7la1	310	c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (C	2e-47
d1ve1a1	302	c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (C	2e-46
d1o58a_	293	c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei	1e-45
d1fcja_	302	c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei	2e-43
d2bhsa1	292	c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (C	1e-39
d1wkva1	382	c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (C	2e-30
d1tdja1	331	c.79.1.1 (A:5-335) Threonine deaminase {Escherichi	1e-28
d1v71a1	318	c.79.1.1 (A:6-323) Hypothetical protein C320.14 (S	3e-25
d1tyza_	338	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	3e-21
d1ve5a1	310	c.79.1.1 (A:2-311) Threonine deaminase {Thermus th	1e-20
d1f2da_	341	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	2e-20
d1e5xa_	477	c.79.1.1 (A:) Threonine synthase {Mouse-ear cress	3e-20
d1j0aa_	325	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	1e-17
d1p5ja_	319	c.79.1.1 (A:) L-serine dehydratase {Human (Homo sa	6e-17
d1v7ca_	351	c.79.1.1 (A:) Threonine synthase {Thermus thermoph	9e-17
d1v8za1	386	c.79.1.1 (A:1-386) Tryptophan synthase, beta-subun	1e-15
d1qopb_	390	c.79.1.1 (B:) Tryptophan synthase, beta-subunit {S	3e-12

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 320

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  182 bits (462), Expect = 2e-57
 Identities = 142/214 (66%), Positives = 173/214 (80%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           IA D+TELIGNTP+VYLNN+ +GC  R+AAKLEMMEPCSSVKDRI FSMI DAE+KGLI 
Sbjct: 3   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 62

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG++VLIE TSGNTG+G+A  AAAKGYKLI+ MPA MS E+RIIL A+G +L+LT+   G
Sbjct: 63  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 122

Query: 128 IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG 187
           +       EE+L K P  +   QF+NPANPK HYETTGPEIW+GT G++D FVSGIGTGG
Sbjct: 123 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 182

Query: 188 TVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
           T++G G +LK++N  +K+YGVEP ESAIL+GGK 
Sbjct: 183 TITGAGKYLKEQNANVKLYGVEPVESAILSGGKP 216

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 4e-50
 Identities = 91/217 (41%), Positives = 129/217 (59%), Gaps = 6/217 (2%)

Query: 8   IANDITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGL 65
           I  DI + IG+TPMV +N I    G K  + AK E      SVKDRI+  MI+DAE  G 
Sbjct: 34  ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 93

Query: 66  ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE 125
           + PG T+ IE TSGNTGIG+A  AA +GY+ I+VMP  MS EK  +L+A GA+++ T   
Sbjct: 94  LKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 152

Query: 126 MG---IDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSG 182
                 +    +   L N+IP S    Q++N +NP  HY+TT  EI +   G++D+ V+ 
Sbjct: 153 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 212

Query: 183 IGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG 219
           +GTGGT++G+   LK+K P  ++ GV+P  S +    
Sbjct: 213 VGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAEPE 249

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} Length = 310

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

 Score =  156 bits (395), Expect = 2e-47
 Identities = 89/217 (41%), Positives = 128/217 (58%), Gaps = 5/217 (2%)

Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           AI  D +  IGNTP+V L +   G    +  K+E   P  SVK RI  +M+  AE+ G +
Sbjct: 1   AIYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTL 58

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
           T GK + ++ TSGNTGI +A  AAA+GYK+ L MP  MSLE++ +L   G  L+LT    
Sbjct: 59  TKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 117

Query: 127 GIDEEF-RIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185
           G+     +  E + +         QF+NPANP+ H ETTGPEIW+ T G+VD+ V+G+GT
Sbjct: 118 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGT 177

Query: 186 GGTVSGVGNFLKK-KNPEIKVYGVEPAESAILNGGKA 221
           GG+++G+   +K     +I    VEP ES +++   A
Sbjct: 178 GGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLA 214

>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermus thermophilus [TaxId: 274]

 Score =  153 bits (387), Expect = 2e-46
 Identities = 105/209 (50%), Positives = 146/209 (69%), Gaps = 2/209 (0%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK- 70
           +   IG TP+V L  +V+   A +  KLE + P  S+KDR A+ MIKDAEE+G++ PG  
Sbjct: 3   VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62

Query: 71  TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDE 130
            V++E TSGNTGIG+A  AA++GY+LIL MPA MS E++ +L+A+GA+L+LT+ E  +  
Sbjct: 63  QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRML- 121

Query: 131 EFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVS 190
             R     L +   +F P QFKNPAN + HYETTGPE++E   G++D FV G GTGGT++
Sbjct: 122 AAREEALRLKEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181

Query: 191 GVGNFLKKKNPEIKVYGVEPAESAILNGG 219
           GVG +LK++ P +KV  VEPA S +L+GG
Sbjct: 182 GVGRYLKERIPHVKVIAVEPARSNVLSGG 210

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} Length = 293

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

 Score =  151 bits (382), Expect = 1e-45
 Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 9/213 (4%)

Query: 10  NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
           + +  LIG+TP+V L++I     +RI  KLE   P  SVKDR A  MI DAE++GL+  G
Sbjct: 2   HMMERLIGSTPIVRLDSI----DSRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG 57

Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
              ++E TSGN GI +A   A +G+++IL MP  MS+E+R +L+  GA+L+LT  E+G+ 
Sbjct: 58  ---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMK 114

Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV 189
                  E+  +   +   +QF+NP N  +H  TTGPEI +    Q+D FV+G+GTGGT+
Sbjct: 115 GAVEKALEISRETG-AHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTI 173

Query: 190 SGVGNFLKKKNPE-IKVYGVEPAESAILNGGKA 221
           SGVG  LK      +K+  VEPA+S +L+GG+ 
Sbjct: 174 SGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQP 206

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

 Score =  145 bits (367), Expect = 2e-43
 Identities = 98/217 (45%), Positives = 134/217 (61%), Gaps = 7/217 (3%)

Query: 8   IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLIT 67
           I  D +  IG+TP+V LN I      RI AK+E   P  SVK RI  +MI DAE++G++ 
Sbjct: 3   IYEDNSLTIGHTPLVRLNRI---GNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 59

Query: 68  PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMG 127
           PG  + +E T+GNTGI +A  AAA+GYKL L MP  MS+E+R +L+A GA L+LT    G
Sbjct: 60  PGVEL-VEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118

Query: 128 IDEEFRIVEELLNKI-PTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTG 186
           +    +  EE++           QF NPANP+ H +TTGPEIWE T GQVD+F+SG+GTG
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178

Query: 187 GTVSGVGNF--LKKKNPEIKVYGVEPAESAILNGGKA 221
           GT++GV  +    K   ++    VEP +S ++    A
Sbjct: 179 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALA 215

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} Length = 292

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

 Score =  135 bits (340), Expect = 1e-39
 Identities = 89/209 (42%), Positives = 129/209 (61%), Gaps = 2/209 (0%)

Query: 10  NDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPG 69
           + + + IGNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE++G I PG
Sbjct: 1   STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG 60

Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
             + IE TSGNTGI +A  AA KGY++ L+MP  MS E+R  ++AYGA+LIL   E G++
Sbjct: 61  DVL-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGME 119

Query: 130 EEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTV 189
               +  E +          QF NP NP  HY TTGPEIW+ T G++  FVS +GT GT+
Sbjct: 120 GARDLALE-MANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTI 178

Query: 190 SGVGNFLKKKNPEIKVYGVEPAESAILNG 218
           +GV  F+++++  + + G++P E + + G
Sbjct: 179 TGVSRFMREQSKPVTIVGLQPEEGSSIPG 207

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 382

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score =  113 bits (283), Expect = 2e-30
 Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 12/218 (5%)

Query: 8   IANDITELIGN---TPMVYLNNIVDGCKARIAAKLEMMEPCS-SVKDRIAFSMIKDAEEK 63
           +     +       TP+V    +      R+  KLE   P S SVKDR A  +I     +
Sbjct: 82  VFPSPLDFFERGKPTPLVRSR-LQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRR 140

Query: 64  GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN 123
             +  G  V  + TS N G+ ++  A   GY+  + +P       +++ +  GAQ+I+  
Sbjct: 141 --VEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDP 197

Query: 124 AEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE---GTRGQVDIFV 180
                      V +  +K     + +QF N AN + H   T  EI+         +    
Sbjct: 198 EAPSTVHLLPRVMK-DSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVA 256

Query: 181 SGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG 218
             +GT G +S    +L+  +P I+   V+PA+   + G
Sbjct: 257 GSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPG 294

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} Length = 331

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 9/203 (4%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKT 71
           + E    TP+  +  +       I  K E  +P  S K R A++M+    E+        
Sbjct: 21  VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQ----KAH 76

Query: 72  VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEE 131
            +I  ++GN   G+A  +A  G K ++VMP   +  K   ++ +G +++L  A     + 
Sbjct: 77  GVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKA 136

Query: 132 FRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSG 191
             I    L++         F +P       + T           +D     +G GG  +G
Sbjct: 137 KAIE---LSQQQGFTWVPPFDHPMVI--AGQGTLALELLQQDAHLDRVFVPVGGGGLAAG 191

Query: 192 VGNFLKKKNPEIKVYGVEPAESA 214
           V   +K+  P+IKV  VE  +SA
Sbjct: 192 VAVLIKQLMPQIKVIAVEAEDSA 214

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 318

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 98.4 bits (244), Expect = 3e-25
 Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 9/201 (4%)

Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           + +  I +    TP++  + +     A +  K E  +   + K R A + +    E    
Sbjct: 10  SASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEA--- 66

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
              K  ++  +SGN    +A  A   G    ++MP      K    + YG Q+I    + 
Sbjct: 67  -QRKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVI--MYDR 123

Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTG 186
             D+  ++ +E+  +         + +P +      T   E++E   G +D     +G G
Sbjct: 124 YKDDREKMAKEISEREG-LTIIPPYDHP-HVLAGQGTAAKELFEEV-GPLDALFVCLGGG 180

Query: 187 GTVSGVGNFLKKKNPEIKVYG 207
           G +SG     +   P  +VYG
Sbjct: 181 GLLSGSALAARHFAPNCEVYG 201

>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]} Length = 338

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Pseudomonas sp., strain ACP [TaxId: 306]

 Score = 87.8 bits (216), Expect = 3e-21
 Identities = 39/227 (17%), Positives = 65/227 (28%), Gaps = 23/227 (10%)

Query: 12  ITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSV---KDRIAFSMIKDAEEKGLI 66
                G TP+  L  +    G K  + AK E      +    K R    +I +A  +G  
Sbjct: 9   YPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCD 68

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT---- 122
           T    V I     N    +A  AA  G K +LV   +++    +  +    Q+       
Sbjct: 69  TL---VSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGAD 125

Query: 123 ------NAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW-----EG 171
                   ++G    +    E +                +P       G           
Sbjct: 126 VRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAE 185

Query: 172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG 218
              + D  V    TG T +G+           +V GV+ +       
Sbjct: 186 LGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPAQTR 232

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]} Length = 310

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

 Score = 85.8 bits (211), Expect = 1e-20
 Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 12/210 (5%)

Query: 7   AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
           A    I      TP++    +      R+  K E ++   S K R A S     E     
Sbjct: 8   AAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE----- 62

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
                 L+  +SGN   G+A  A   G K ++VMP   S  K+   +AYGA+++      
Sbjct: 63  --NPKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVTA 120

Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTR--GQVDIFVSGIG 184
              EE         +       H F +P             + +  R        ++ +G
Sbjct: 121 KNREEVARAL---QEETGYALIHPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVG 177

Query: 185 TGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
            GG ++G+   +K  +P   V GVEP  + 
Sbjct: 178 GGGLLAGLATAVKALSPTTLVLGVEPEAAD 207

>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]} Length = 341

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Yeast (Hansenula saturnus) [TaxId: 4906]

 Score = 85.5 bits (210), Expect = 2e-20
 Identities = 35/226 (15%), Positives = 63/226 (27%), Gaps = 26/226 (11%)

Query: 12  ITELIGNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSV---KDRIAFSMIKDAEEKGLI 66
                G +P+  LN +    G K  + AK E      +    K R    ++ D  E    
Sbjct: 9   YPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGD-- 66

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
                V I     N    +A  AA  G K +L+   ++ + +           I  +  M
Sbjct: 67  -YTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIM 125

Query: 127 GIDE---------------EFRIVEELLNKIPTSFNPHQFKNPANPKTHY---ETTGPEI 168
           G D                   + E           P            +          
Sbjct: 126 GADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYGGLGFVGFADEVINQ 185

Query: 169 WEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
                 + D  V    TG T +G+   + +   +  V  ++ + ++
Sbjct: 186 EVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTS 231

>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 477

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 86.2 bits (212), Expect = 3e-20
 Identities = 20/183 (10%), Positives = 52/183 (28%), Gaps = 5/183 (2%)

Query: 17  GNTPMVYLNNIVD--GCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLI 74
           GN+ + +             +  K   +    S KD     ++        +      + 
Sbjct: 120 GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVG 179

Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRI 134
             ++G+T   ++ + A+ G   I+ +P    +    ++Q       + + +   D   ++
Sbjct: 180 CASTGDTSAALSAYCASAGIPSIVFLP-ANKISMAQLVQPIANGAFVLSIDTDFDGCMKL 238

Query: 135 VEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGN 194
           + E               N    +         + +      D  +   G  G +     
Sbjct: 239 IRE--ITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYK 296

Query: 195 FLK 197
             K
Sbjct: 297 GFK 299

>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 325

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 77.8 bits (190), Expect = 1e-17
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 9/209 (4%)

Query: 12  ITELIGNTPMVYLNNIVDGCKARIAAKLEMM--EPCSSVKDRIAFSMIKDAEEKGLITPG 69
           +  +   TP+ YL NI     A +  K + +        K R    ++ DA  KG     
Sbjct: 15  VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVV- 73

Query: 70  KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID 129
             + +     N        A   G   ILV+     L+   +L                 
Sbjct: 74  --ITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSF 131

Query: 130 EEFRIVEEL----LNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGT 185
           E  +  EE+      +    +              Y     EI   +  + D  V   G+
Sbjct: 132 ELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSEVKFDSIVVAAGS 191

Query: 186 GGTVSGVGNFLKKKNPEIKVYGVEPAESA 214
           GGT++G+   L   N +I+  G+      
Sbjct: 192 GGTLAGLSLGLSILNEDIRPVGIAVGRFG 220

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 319

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (185), Expect = 6e-17
 Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 7/192 (3%)

Query: 15  LIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLI 74
           L   TP+     +       +  K++  +P  S K R      K   ++G         +
Sbjct: 4   LHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGCAH-----FV 58

Query: 75  ECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRI 134
             ++GN G+  A  A   G    +V+P          L+  GA   +    +    E   
Sbjct: 59  CSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDEAFEL-- 116

Query: 135 VEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGN 194
            + L    P       F +P   + H                 I +S  G G     V  
Sbjct: 117 AKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQG 176

Query: 195 FLKKKNPEIKVY 206
             +    ++ V 
Sbjct: 177 LQECGWGDVPVI 188

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]} Length = 351

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.5 bits (184), Expect = 9e-17
 Identities = 41/220 (18%), Positives = 70/220 (31%), Gaps = 17/220 (7%)

Query: 9   ANDITELIGNTPMVYLNNIV--DGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLI 66
              I+ L G+TP++ L           R+ AK E + P  S KDR     +  A E G  
Sbjct: 19  TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGAQ 78

Query: 67  TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEM 126
                     ++GNT    A +AA  G   I+V+PA      ++         I+     
Sbjct: 79  AV-----ACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIV----Q 129

Query: 127 GIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTG 186
                   +                    +     +T   E+ +            +G  
Sbjct: 130 VEGNFDDALRLTQKLTEAFPVALVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNA 189

Query: 187 GTVS------GVGNFLKKKNPEIKVYGVEPAESAILNGGK 220
           G ++         + L K     ++ G + A +A L  G+
Sbjct: 190 GNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLVLGR 229

>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 386

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 72.6 bits (177), Expect = 1e-15
 Identities = 39/214 (18%), Positives = 69/214 (32%), Gaps = 18/214 (8%)

Query: 19  TPMVYLNNIVDGCK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECT 77
           TP+ Y   + +    A+I  K E +    + K   A      A+  G       ++ E  
Sbjct: 51  TPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMG----KTRLIAETG 106

Query: 78  SGNTGIGMACFAAAKGYKLILVMPAF---MSLEKRIILQAYGAQLILTNAEMG-----ID 129
           +G  G+  A   A  G K+ + M A            ++  GA +I  N+        I+
Sbjct: 107 AGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAIN 166

Query: 130 EEFRIVEELLNK--IPTSFNPHQFKNPANPKTHYETTGPEI---WEGTRGQVDIFVSGIG 184
           E  R                      P   +      G E         GQ+   +    
Sbjct: 167 EALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACV 226

Query: 185 TGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNG 218
            GG+ +    +    + ++K+ GVE     + +G
Sbjct: 227 GGGSNAMGIFYPFVNDKKVKLVGVEAGGKGLESG 260

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} Length = 390

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

 Score = 62.9 bits (152), Expect = 3e-12
 Identities = 38/217 (17%), Positives = 64/217 (29%), Gaps = 19/217 (8%)

Query: 19  TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTS 78
           T +    NI  G +  +  K E +    + K          A+  G          E  +
Sbjct: 56  TALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEII----AETGA 111

Query: 79  GNTGIGMACFAAAKGYKLILVMPA---FMSLEKRIILQAYGAQLILTNAEMGIDEEFRIV 135
           G  G+  A  +A  G K  + M A            ++  GA++I  ++      +    
Sbjct: 112 GQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSA-TLKDACN 170

Query: 136 EELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTR-----------GQVDIFVSGIG 184
           E L +   +    H     A     Y T   E                 G++   V    
Sbjct: 171 EALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACV 230

Query: 185 TGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGKA 221
            GG+ +         +  + + GVEP    I  G   
Sbjct: 231 GGGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEHG 267

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1ve1a1	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	100.0
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	100.0
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	100.0
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	100.0
d1ve5a1	310	Threonine deaminase {Thermus thermophilus [TaxId:	100.0
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1e5xa_	477	Threonine synthase {Mouse-ear cress (Arabidopsis t	100.0
d1v7ca_	351	Threonine synthase {Thermus thermophilus [TaxId: 2	100.0
d1v8za1	386	Tryptophan synthase, beta-subunit {Archaeon Pyroco	100.0
d1qopb_	390	Tryptophan synthase, beta-subunit {Salmonella typh	100.0
d1j0aa_	325	1-aminocyclopropane-1-carboxylate deaminase {Archa	100.0
d1tyza_	338	1-aminocyclopropane-1-carboxylate deaminase {Pseud	100.0
d1f2da_	341	1-aminocyclopropane-1-carboxylate deaminase {Yeast	99.97
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	99.8
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	99.32
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.51
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.26
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.15
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.11
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.65
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.65
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.61
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	95.59
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	95.57
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.42
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.07
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.02
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	94.85
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.74
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.47
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	94.46
d1vp8a_	190	Hypothetical protein AF0103 {Archaeoglobus fulgidu	93.76
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	93.64
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	93.54
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	93.51
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	93.15
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	92.99
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	92.98
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	92.87
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	92.81
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	92.72
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.66
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	92.33
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	92.13
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	92.03
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	91.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	91.75
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	91.67
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	91.53
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	91.1
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	90.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.9
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	90.9
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	90.85
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	90.72
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	90.69
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	90.61
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	90.57
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.49
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	90.1
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	90.1
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	89.63
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	89.56
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	89.42
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	88.95
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	88.86
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	88.81
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	88.58
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	88.19
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	87.98
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	87.87
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	87.63
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	87.36
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	87.19
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	86.67
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	86.24
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	85.4
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	85.01
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	84.15
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	83.77
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	83.73
d1t57a_	186	Hypothetical protein MTH1675 {Methanobacterium the	83.64
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	83.53
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	81.8
d1jx6a_	338	Quorum-sensing signal (autoinducer-2) binding prot	81.6
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	80.78
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	80.74
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	80.23

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.6e-53  Score=358.27  Aligned_cols=214  Identities=66%  Similarity=1.098  Sum_probs=195.7

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      ++.+++++.+|+|||+++++|++.+|++||+|+|++|||||||||++.+++.+++++|.+.++...||++|+||||.|+|
T Consensus         2 ~i~~~i~~~iG~TPLv~~~~l~~~~g~~i~~K~E~~nptGSfKdRgA~~~i~~a~~~g~~~~~~~~vv~aSsGN~g~a~A   81 (320)
T d1z7wa1           2 RIAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLA   81 (320)
T ss_dssp             CCCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHH
T ss_pred             chhhhhhhhcCCCCeEECCCcccccCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCceEEeeCCchHHHHHH
Confidence            46678899999999999999999999999999999999999999999999999999998877777899999999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      ++|+.+|++|++|+|++++..|+++++.+||+|+.++...+..+....+.+...+.++++|+++++|+.++.+|+.|++.
T Consensus        82 ~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~g~~t~~~  161 (320)
T d1z7wa1          82 FTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGP  161 (320)
T ss_dssp             HHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHhCCCceecccccccchHHHhhhhHHH
Confidence            99999999999999999999999999999999999976533334445555555556689999999999998889999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      ||.+|+.+.+|+||+|+|+||+++|++.+|+..+|.+++++|||++|+.+.++.
T Consensus       162 EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~~~s~~~~~~~  215 (320)
T d1z7wa1         162 EIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGK  215 (320)
T ss_dssp             HHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCGGGTCC
T ss_pred             HHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccccCCccccCCC
Confidence            999999778999999999999999999999999999999999999999987764

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=100.00  E-value=3.5e-51  Score=343.64  Aligned_cols=207  Identities=44%  Similarity=0.733  Sum_probs=191.3

Q ss_pred             hhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           12 ITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        12 ~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      +.+.+|+|||+++++|++.+|++||+|+|++|||||||||++.+++..+.++|.+.++. +|+++|+||||.|+|++|+.
T Consensus         3 i~~~IG~TPL~~~~~l~~~~g~~iy~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~-~vv~aSsGN~g~a~A~~a~~   81 (292)
T d2bhsa1           3 LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGD-VLIEATSGNTGIALAMIAAL   81 (292)
T ss_dssp             GGGGSSCCCEEECSSSSCCSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTS-EEEEECCSHHHHHHHHHHHH
T ss_pred             hhcccCCCceEECCccChhhCCEEEEEeCCCCCCCCcHHHHHHHHHHHHHHhCCcCCCc-eeeeecccchhHHHHHHHHh
Confidence            56789999999999999999999999999999999999999999999999999877764 59999999999999999999


Q ss_pred             cCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209           92 KGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEG  171 (221)
Q Consensus        92 ~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  171 (221)
                      +|++|+||+|++++..|++.++.+||+|+.++.+.++.++...+.+..++. +.+|.+||+|+.++.+|+.++++||++|
T Consensus        82 ~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~Ei~~q  160 (292)
T d2bhsa1          82 KGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG-EGKLLDQFNNPDNPYAHYTTTGPEIWQQ  160 (292)
T ss_dssp             HTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT-SSEECCTTTCTHHHHHHHHTHHHHHHHH
T ss_pred             cCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc-cccccCCCchhcchhhHHHHHHHHhHHh
Confidence            999999999999999999999999999999987755556666676776666 7889999999999988999999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          172 TRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       172 ~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      +++.+|+||+|+|+||+++|++.++++..|+++|++|||++++++..+.
T Consensus       161 ~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep~~~~~~~~~~  209 (292)
T d2bhsa1         161 TGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIR  209 (292)
T ss_dssp             TTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTTCCCTTCC
T ss_pred             cCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecccccccccccc
Confidence            9878999999999999999999999999999999999999999887653

>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.8e-51  Score=343.35  Aligned_cols=209  Identities=50%  Similarity=0.832  Sum_probs=192.7

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCC-eEEEeeCCChHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGK-TVLIECTSGNTGIGMACFA   89 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~-~~vv~assGN~~~alA~~a   89 (221)
                      |+...+++|||+++++|++.+|++||+|+|++|||||||+|++.+++.+++++|.+.+++ .+|+++|+||||.|+|++|
T Consensus         2 ri~~~ig~TPLi~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~~~~vv~~SsGN~g~a~A~~a   81 (302)
T d1ve1a1           2 RVEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIA   81 (302)
T ss_dssp             CGGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHH
T ss_pred             cccCccCCCCeEECcccchhhCCEEEEEeCCCCcccCcHHHHHHHHHHHHHHhCCCCCCCCcEEEEecCCcchhhhhhhh
Confidence            567889999999999999999999999999999999999999999999999999777654 5799999999999999999


Q ss_pred             HHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHH
Q 043209           90 AAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIW  169 (221)
Q Consensus        90 ~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  169 (221)
                      +.+|++|++|+|+..+..+++.++.+|++++.+....+..+....+.+..++. +++|++||+|+.++.+|+.|++.||+
T Consensus        82 ~~~g~~~~iv~p~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~EI~  160 (302)
T d1ve1a1          82 ASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEEL-GAFMPDQFKNPANVRAHYETTGPELY  160 (302)
T ss_dssp             HHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHH-TCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred             hccCcceeEeeecccchheeehhhhhhhcchhcccccchHHHHHHhhhhhhcc-CccccccCccchhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999988755556666666677766 89999999999999889999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCCC
Q 043209          170 EGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGGK  220 (221)
Q Consensus       170 ~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~~  220 (221)
                      +|++++||+||+|+|+||+++|++.+|+..+|+++||||||++++.+..+.
T Consensus       161 ~q~~~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~iigve~~~~~~~~~~~  211 (302)
T d1ve1a1         161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGK  211 (302)
T ss_dssp             HHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGGCTTTTCC
T ss_pred             HHcCCCCCeEEEeecCcHHHHHHHHHHHhcCCCCEEEEEEecccceeeecc
Confidence            999878999999999999999999999999999999999999999987654

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.8e-50  Score=339.71  Aligned_cols=205  Identities=45%  Similarity=0.685  Sum_probs=185.8

Q ss_pred             hHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACF   88 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~   88 (221)
                      |+++...+|+|||+++++|    +.+||+|+|++|||||||||++.+++.+++++|...++   |+++|+||||.|+|++
T Consensus         1 ~~~i~~~ig~TPL~~~~~l----~~~i~~K~E~~nptGSfK~Rga~~~i~~a~~~g~~~~~---vv~~SsGN~g~a~A~~   73 (293)
T d1o58a_           1 HHMMERLIGSTPIVRLDSI----DSRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG---IVEPTSGNMGIAIAMI   73 (293)
T ss_dssp             CCHHHHHSCCCCEEECTTT----CTTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTTC---EEEECSSHHHHHHHHH
T ss_pred             CchhhhhcCCCCcEECCCC----CCEEEEEECCCCCccChHHHHHHHHHHHHHHcCCCCcc---eEEecCcchhhHHHHh
Confidence            4678889999999998865    45899999999999999999999999999999865444   9999999999999999


Q ss_pred             HHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHH
Q 043209           89 AAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEI  168 (221)
Q Consensus        89 a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  168 (221)
                      |+.+|++|++|+|++++..|+++++.+||+|+.++.+.+......++.+++++. +++|+++|+|+.++.+|+.+++.||
T Consensus        74 a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~Ei  152 (293)
T d1o58a_          74 GAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEI  152 (293)
T ss_dssp             HHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHH
T ss_pred             hhhccceeEeeccccccHHHeeccccCCcEEEEecCcchhhHHHHHHHHHHhcc-CCEEeeeccccceeeeccccHHHhh
Confidence            999999999999999999999999999999999987644556677777888887 7899999999998888999999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCCCCCC
Q 043209          169 WEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILNGGKA  221 (221)
Q Consensus       169 ~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~~~~~  221 (221)
                      .+|+++++|+||+|+|+||+++|++.+|++.. +++|||+|||++|++|+++.+
T Consensus       153 ~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~~ii~vep~~~~~l~~~~~  206 (293)
T d1o58a_         153 LKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKSPVLSGGQP  206 (293)
T ss_dssp             HHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTSCTTTTCCC
T ss_pred             hhhcCCCCCEEEEecCcchhHHHHHHHHHHHCCCCCeEEEEecCCCccccCCCc
Confidence            99998889999999999999999999999865 469999999999999987653

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-50  Score=344.12  Aligned_cols=210  Identities=42%  Similarity=0.674  Sum_probs=186.9

Q ss_pred             chhHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIG   84 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~a   84 (221)
                      ++++.+.+.+|+|||+++++|++.+|  ++||+|+|++|||||||||++.+++.+|+++|.+.+++ +|+++|+||||.|
T Consensus        33 ~~~~~i~~~IG~TPLv~l~~ls~~~G~~~~i~~K~E~~nptGSfKdRga~~~i~~a~~~g~~~~~~-~vv~aSsGN~g~a  111 (355)
T d1jbqa_          33 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPGD-TIIEPTSGNTGIG  111 (355)
T ss_dssp             SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTTC-EEEEECSSHHHHH
T ss_pred             cccccHHHhcCCCCcEECcchhHHhCCCCEEEEEECCCCCccCHHHHHHHHHHHHHHHcCCcccCc-eEEEecccchhhH
Confidence            56778889999999999999999877  58999999999999999999999999999999877764 5999999999999


Q ss_pred             HHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChh---HHHHHHHHHHhhCCCeeecCCCCCCccHHHHH
Q 043209           85 MACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGID---EEFRIVEELLNKIPTSFNPHQFKNPANPKTHY  161 (221)
Q Consensus        85 lA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  161 (221)
                      +|++|+++|++|+||||.+++..|++.|+.+||+|+.++......   +......+...+.+..+|.+++.|+.++.+||
T Consensus       112 ~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~  191 (355)
T d1jbqa_         112 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY  191 (355)
T ss_dssp             HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred             HHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHHHhccccccccccCcccchhhhc
Confidence            999999999999999999999999999999999999987643222   34444555555655788899999998888899


Q ss_pred             hhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          162 ETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       162 ~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      .|++.||++|++++||+||+|+|+||+++|++.+|++.++++||++|||++|+.+.
T Consensus       192 ~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep~gs~~~~  247 (355)
T d1jbqa_         192 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGSILAE  247 (355)
T ss_dssp             HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTCSCSS
T ss_pred             ccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecccCCcccc
Confidence            99999999999888999999999999999999999999999999999999997654

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=5.2e-50  Score=339.90  Aligned_cols=204  Identities=22%  Similarity=0.289  Sum_probs=189.0

Q ss_pred             cccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHH
Q 043209            4 EKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGI   83 (221)
Q Consensus         4 ~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~   83 (221)
                      ++..+++++.+++++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++.+.+.    ...|+++|+||||.
T Consensus         7 di~~a~~ri~~~i~~TPl~~~~~l~~~~g~~i~~K~E~~nptGSfKdRga~~~~~~~~~~~~----~~~vv~~ssGN~g~   82 (318)
T d1v71a1           7 DVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQR----KAGVLTFSSGNHAQ   82 (318)
T ss_dssp             HHHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHH----HHCEEECCSSHHHH
T ss_pred             HHHHHHHHHhccCCCCCEEEchhhhHHHCCEEEEEeCCCCCCCCHHHHHHHHHHHHhhhccc----cceeeeeccchhhH
Confidence            46678899999999999999999999999999999999999999999999999988766543    34599999999999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      ++|++|+.+|++|++|+|.+.+..+++.++.+||+|+.++..  ++++...+++++++. +++|+++|+|+.+++ ||.+
T Consensus        83 a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~a~~~a~~~-g~~~~~~~~~~~~~~-g~~t  158 (318)
T d1v71a1          83 AIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHVLA-GQGT  158 (318)
T ss_dssp             HHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHHHH-HHTH
T ss_pred             HHHHhhcccccceeecccccccHHHHHHHHHcCCcEEeccCC--chHHHHHHHHHHHhc-CCEecCCcccccccc-ccch
Confidence            999999999999999999999999999999999999999875  778888899998887 899999999998886 9999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      +++||++|+ +++|+||+|+|+||+++|++.+++..+|+++|++|+|++++++
T Consensus       159 ~~~Ei~~q~-~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~~~~~~~~  210 (318)
T d1v71a1         159 AAKELFEEV-GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEAGNDG  210 (318)
T ss_dssp             HHHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGGCHH
T ss_pred             HHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeecccccchhhh
Confidence            999999999 5799999999999999999999999999999999999987653

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=7.5e-48  Score=325.94  Aligned_cols=206  Identities=42%  Similarity=0.683  Sum_probs=181.9

Q ss_pred             hhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209            8 IANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus         8 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +|++++..+|+|||++++++++  +.+||+|+|++|||||||||+|.+++.++.+.|.+.+++ +||++|+||||.|+|+
T Consensus         2 ~y~~~~~~ig~TPLv~~~~l~~--~~~I~lK~E~~nptGSfK~RgA~~~i~~a~~~g~~~~~~-~vv~~SsGN~g~a~A~   78 (310)
T d1y7la1           2 IYADNSYSIGNTPLVRLKHFGH--NGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGK-EIVDATSGNTGIALAY   78 (310)
T ss_dssp             CCSSGGGGCCCCCEEECSSSSS--TTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTTC-EEEESCCSHHHHHHHH
T ss_pred             ccchhhhhcCCCCeEECCCCCC--CCEEEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCCCc-eeeeecCCCchHHHHH
Confidence            6888999999999999988876  578999999999999999999999999999999877774 5999999999999999


Q ss_pred             HHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHH-HhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           88 FAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEEL-LNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~-~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      +|+.+|++|+||+|.+++..|+++++.+||+|+.+++..+.++......+. .+...+.+|+++++|+.+++.|+.+++.
T Consensus        79 ~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  158 (310)
T d1y7la1          79 VAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGP  158 (310)
T ss_dssp             HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhhcCccccCCCCcchhhHHHhhhhHHH
Confidence            999999999999999999999999999999999998752222233322222 3333478899999999999889999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHh-cCCCcEEEEEeCCCCccC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKK-KNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~-~~~~~kvigVe~~~s~~~  216 (221)
                      ||.+|+++.||+||+|+|+||+++|++.++|. ..|++|+++|||.+++.+
T Consensus       159 Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk~~~~~~~~~i~ve~~~~~~~  209 (310)
T d1y7la1         159 EIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVI  209 (310)
T ss_dssp             HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTSCHH
T ss_pred             HHHHhcCCCCCEEEecCcCCcchhHHHHHHHHhhcccceeccccccCchhh
Confidence            99999988899999999999999999999985 779999999999998654

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=5.1e-48  Score=334.02  Aligned_cols=210  Identities=24%  Similarity=0.315  Sum_probs=184.8

Q ss_pred             ccchhHHhhcccC---CCceeecccccCCCCCeEEEEeCCCCCCC-chhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCh
Q 043209            5 KCAIANDITELIG---NTPMVYLNNIVDGCKARIAAKLEMMEPCS-SVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGN   80 (221)
Q Consensus         5 ~~~~~~~~~~~~~---~TPl~~~~~l~~~~g~~i~~K~E~~~ptG-s~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN   80 (221)
                      -+.+|++..+.++   +|||+++ ++....|++||+|+|++|||| |||||++.+++.+|.++  +.++. +||++|+||
T Consensus        79 ~~~~~~~~l~~~~~~~PTPLvrl-~l~~~~G~~IylKlE~~NPtGgSfKdR~A~~~i~~A~~~--~~~g~-~VVeaSSGN  154 (382)
T d1wkva1          79 GEMVFPSPLDFFERGKPTPLVRS-RLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKGS-LVADATSSN  154 (382)
T ss_dssp             TTCEESSHHHHHHHSCSCCEEEC-CCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTT--SCTTC-EEEEECCHH
T ss_pred             cceEeCCHHHHhcCCCCCCEEEC-CCCCCCCCEEEEEecCCCCCCCccHHHHHHHHHHHHHhc--cCCCC-EEEEeCCcH
Confidence            3456777666664   4999997 566678999999999999986 99999999999998643  45654 499999999


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHH
Q 043209           81 TGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTH  160 (221)
Q Consensus        81 ~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  160 (221)
                      ||.|+|++|+.+|++|+||+|++++..|++.++.+||+|+.++...+..+...++.+.+++. +++|++|++|+.++.+|
T Consensus       155 ~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~-~~~~~~q~~N~~~~~~h  233 (382)
T d1wkva1         155 FGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAH  233 (382)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecCcchhhHHHHHHHhhhcccc-Cccccccccccceeeeh
Confidence            99999999999999999999999999999999999999999987655566667777777776 78999999999999989


Q ss_pred             HhhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCCCC
Q 043209          161 YETTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILNGG  219 (221)
Q Consensus       161 ~~t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~~~  219 (221)
                      |.|++.||++|++   ..+|+||+|+|+||+++|++.++++.+|++|||+|||++++.+++.
T Consensus       234 ~~ttg~EI~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkiigVep~~~~~i~g~  295 (382)
T d1wkva1         234 MRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQGDSIPGI  295 (382)
T ss_dssp             HHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECTTCCCTTC
T ss_pred             hhcchHHHHHHhhcCCCceeEEEEecccccccccceeehhhhCCccceeEeccccccccccc
Confidence            9999999999983   3689999999999999999999999999999999999999988764

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-48  Score=328.59  Aligned_cols=195  Identities=19%  Similarity=0.207  Sum_probs=183.1

Q ss_pred             ccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCC
Q 043209           15 LIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGY   94 (221)
Q Consensus        15 ~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~   94 (221)
                      +.-+|||+++++|++.+|++||+|+|++|||||||||++.+++.++.++|.     ++||++|+||||.|+|++|+.+|+
T Consensus         4 ~~~~TPl~~~~~L~~~~g~~i~~K~E~~nptGSfK~R~a~~~~~~a~~~g~-----~~vv~aSsGN~g~a~A~~a~~~G~   78 (319)
T d1p5ja_           4 LHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAAYAARQLGV   78 (319)
T ss_dssp             SSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTC
T ss_pred             CceeCCcEEhHHhHHHHCCEEEEEeCCCCCCCCcHHHHHHHHHHHHHHcCC-----CEEEEeCCCcHHHHHHHHhhhccc
Confidence            345799999999999999999999999999999999999999999999984     569999999999999999999999


Q ss_pred             eEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHHhhCC
Q 043209           95 KLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWEGTRG  174 (221)
Q Consensus        95 ~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~  174 (221)
                      +|+||||++.+..|++.++.+|++|+.++.+  ++++.+.++++++++++.+|+++++|+.+++ |+.+++.||++|+..
T Consensus        79 ~~~i~~p~~~~~~k~~~~~~~Ga~v~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-g~~~~~~Ei~~q~~~  155 (319)
T d1p5ja_          79 PATIVVPGTTPALTIERLKNEGATCKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLIWE-GHASIVKELKETLWE  155 (319)
T ss_dssp             CEEEEECTTCCHHHHHHHHHTTCEEEECCSC--HHHHHHHHHHHHHHSTTEEECCSSCCHHHHH-HHTHHHHHHHHHCSS
T ss_pred             cceeccccccccccccccccceecccccccc--chhHHHHHHHHhhccCccccccccccccccc-ccchhhhhhhccccC
Confidence            9999999999999999999999999999886  8999999999998887889999999999986 999999999999977


Q ss_pred             CCCEEEEccCchhHHHHHHHHHHhcC-CCcEEEEEeCCCCccCC
Q 043209          175 QVDIFVSGIGTGGTVSGVGNFLKKKN-PEIKVYGVEPAESAILN  217 (221)
Q Consensus       175 ~~d~vv~p~G~Gg~~~Gi~~~~~~~~-~~~kvigVe~~~s~~~~  217 (221)
                      .||++|+|+|+||+++|++.+|++.. |++++++|||++++++.
T Consensus       156 ~~d~vv~~vg~Gg~~~g~~~~~~~~~~~~~~~i~ve~~~~~~~~  199 (319)
T d1p5ja_         156 KPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFGAHSFH  199 (319)
T ss_dssp             CCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETTSCHHH
T ss_pred             CCceeeecccCCcchhhhHHHHHHhccCCeeeeecccccccccc
Confidence            89999999999999999999999865 89999999999998764

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-48  Score=332.21  Aligned_cols=198  Identities=26%  Similarity=0.322  Sum_probs=184.3

Q ss_pred             HhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHH
Q 043209           11 DITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        11 ~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      ++++.+++|||+++++|++.+|++||+|+|++|||||||||++.+++..+.+++.    ..+|+++|+||||.|+|++|+
T Consensus        20 ~v~~~~~~TPL~~~~~L~~~lg~~i~~K~E~~nptGS~KdRga~~~i~~~~~~~~----~~~vv~assGN~g~a~A~~a~   95 (331)
T d1tdja1          20 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA   95 (331)
T ss_dssp             CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred             ccceeccCCceeEHHHhhHHHCCEEEEEECCCCCCCChHHHHHHHHHHHHHHhCC----CCeeeecccchhHHHHHHhhc
Confidence            4678899999999999999999999999999999999999999999998876653    455999999999999999999


Q ss_pred             HcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHHHHHH
Q 043209           91 AKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGPEIWE  170 (221)
Q Consensus        91 ~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  170 (221)
                      .+|++|++|+|...+..|++.++.+||+|+.++..  +++..+.+++++++. +++|+++++|+.++. ||.+++.||.+
T Consensus        96 ~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-g~~t~~~Ei~~  171 (331)
T d1tdja1          96 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN--FDEAKAKAIELSQQQ-GFTWVPPFDHPMVIA-GQGTLALELLQ  171 (331)
T ss_dssp             HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSS--HHHHHHHHHHHHHHH-CCEECCSSCCHHHHH-HHHHHHHHHHH
T ss_pred             cccccceeeccccchhHHHHHHHhcCCEEEEcCcc--cccchhhhhhhhhcC-CCccccccCChHHhh-hhhhHHHHHHH
Confidence            99999999999999999999999999999999875  788888888888876 899999999999986 99999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          171 GTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       171 q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      |. +++|+||+|+|+||+++|++.+|++.+|++|||+|||++++++.
T Consensus       172 q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~~~~~~~~  217 (331)
T d1tdja1         172 QD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSACLK  217 (331)
T ss_dssp             HC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTTCHHH
T ss_pred             hc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecccccchHH
Confidence            98 57999999999999999999999999999999999999998763

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.2e-48  Score=325.99  Aligned_cols=204  Identities=24%  Similarity=0.275  Sum_probs=185.0

Q ss_pred             ccccchhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHH
Q 043209            3 SEKCAIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTG   82 (221)
Q Consensus         3 ~~~~~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~   82 (221)
                      .+|..+|+++.+.+++|||+++++|++.+|++||+|+|++|||||||||++.+++.++..       ..+|+++|+||||
T Consensus         4 ~~i~~a~~~i~~~ig~TPL~~~~~L~~~~g~~i~~K~E~~nPtGSfKdRgA~~~~~~~~~-------~~~vv~aSsGN~g   76 (310)
T d1ve5a1           4 QDLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALEN-------PKGLLAVSSGNHA   76 (310)
T ss_dssp             HHHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSSS-------CCCEEEECSSHHH
T ss_pred             HHHHHHHHHHhCcCCCCceeEhhhhhHHhCCEEEEEeCCCCCcCCcHHHHHHHHHHHhcc-------cCCccccCchhhH
Confidence            457789999999999999999999999999999999999999999999999887765422       2349999999999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHh
Q 043209           83 IGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYE  162 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  162 (221)
                      .|+|++|+.+|++|+||||++.+..+++.++.+|++|+.+++.  ++++...+++.+++. +++|++||+||.++. |+.
T Consensus        77 ~a~A~~aa~~G~~~~i~vp~~~~~~~~~~~~~~Ga~vi~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~np~~~~-g~~  152 (310)
T d1ve5a1          77 QGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLVIA-GQG  152 (310)
T ss_dssp             HHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHHHH-HHH
T ss_pred             HHHHHHHHHcCCeEEEeecccchHHHHHHHhhhccccceeecc--chhHHHHHHHHHHhc-CCcCCCCCCChhhHh-hhh
Confidence            9999999999999999999999999999999999999999875  778888999998887 899999999999997 999


Q ss_pred             hHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          163 TTGPEIWEGTR---GQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       163 t~~~Ei~~q~~---~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      +++.||++|++   ..||+||+|+|+||+++|++.++++.+|.+++++|||++++++.
T Consensus       153 t~~~Ei~~q~~~~~~~~d~vv~~~g~Gg~~~g~~~~~~~~~~~~~ii~ve~~~~~~~~  210 (310)
T d1ve5a1         153 TAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEAADDAK  210 (310)
T ss_dssp             HHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGGCHHH
T ss_pred             hhHHHHHHHHHhcCCceeeeeeccCcchhhhhhhhhhhccCCccceEEEEeeccchhh
Confidence            99999999973   46999999999999999999999999999999999999987653

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=7.6e-45  Score=305.90  Aligned_cols=203  Identities=47%  Similarity=0.729  Sum_probs=175.8

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      ++|+++++.+|+|||++++++   .+++||+|+|++|||||||+|++.+++.++++.|++.++. +++++|+||||.|+|
T Consensus         2 k~~~~i~~~ig~TPLi~L~~l---~~~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~-~vv~assGn~g~a~A   77 (302)
T d1fcja_           2 KIYEDNSLTIGHTPLVRLNRI---GNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGV-ELVEPTNGNTGIALA   77 (302)
T ss_dssp             CEESSGGGGCCCCCEEECSSS---SSSCEEEEETTSSGGGBTHHHHHHHHHHHHHHHTCCCTTC-EEEEECSSHHHHHHH
T ss_pred             chHhHHHHhhCCCCcEECCcc---CCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHcCCCCCCc-eEEEeccccchhHHH
Confidence            578899999999999987655   4579999999999999999999999999999999888774 499999999999999


Q ss_pred             HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHH---HHhhCCCeeecCCCCCCccHHHHHhh
Q 043209           87 CFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEE---LLNKIPTSFNPHQFKNPANPKTHYET  163 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~---~~~~~~~~~~~~~~~n~~~~~~g~~t  163 (221)
                      ++|+.+|++|++|+|.+++..+++.++.+|++|+.++..  +.+....++.   ..++..+.++.++++++.++..|+.+
T Consensus        78 ~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t  155 (302)
T d1fcja_          78 YVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGA--KGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKT  155 (302)
T ss_dssp             HHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG--GHHHHHHHHHHHHHHTSTTTEEECCTTTCTHHHHHHHHT
T ss_pred             HHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccc--cccchhhhHHHHHHhhhccceeccccccccchhHHHHhH
Confidence            999999999999999999999999999999999999876  3333333322   23333467888999999988889999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcE--EEEEeCCCCcc
Q 043209          164 TGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIK--VYGVEPAESAI  215 (221)
Q Consensus       164 ~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~k--vigVe~~~s~~  215 (221)
                      ++.||++|+++.+|+||+|+|+||+++|++.+++..+++++  +++++|..++.
T Consensus       156 i~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~~~~~v~~~~~~s~~  209 (302)
T d1fcja_         156 TGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPV  209 (302)
T ss_dssp             HHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTTTCCTTCEEEEEEETTSCH
T ss_pred             HHHHHHHhcCCCCCEEEEcCCCccccccceeeeeeccccccccccccccccchh
Confidence            99999999988899999999999999999999999987654  56666666553

>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.4e-41  Score=297.06  Aligned_cols=204  Identities=14%  Similarity=0.143  Sum_probs=180.5

Q ss_pred             hHHhhcccCCCceeecccccCC-CC-CeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDG-CK-ARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMA   86 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~-~g-~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA   86 (221)
                      -+.++.++|+|||+++++|+++ +| .+||+|+|++|||||||||++.+++..+.+.+....+..+|+++|+||||.|+|
T Consensus       112 ~~~v~lgeG~TPLv~~~~L~~~~lG~~~ly~K~E~~nPTGSfKDRga~~~i~~a~~~~~~~~~~~~vv~aSsGNtg~AlA  191 (477)
T d1e5xa_         112 DDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALS  191 (477)
T ss_dssp             GGCCCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTCCCCEEEECCCSHHHHHHH
T ss_pred             CCccccCCCCCceEEchhhhHhhCCCceEEEEECCCCCCcccHHHHHHHHHHHHHHhccccCCcceEEeecCchHHHHHH
Confidence            4558899999999999999876 56 589999999999999999999999999877655444556799999999999999


Q ss_pred             HHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHH
Q 043209           87 CFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTG  165 (221)
Q Consensus        87 ~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  165 (221)
                      ++|+++|++|+||+|.+ .+..|+.+++.+||+|+.++++  ++++.+.+++++++. + +|..++.|+++++ |+.|++
T Consensus       192 a~aa~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~V~~v~g~--~dda~~~~~e~a~~~-~-~~~~~~~N~~~~~-g~~t~~  266 (477)
T d1e5xa_         192 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTD--FDGCMKLIREITAEL-P-IYLANSLNSLRLE-GQKTAA  266 (477)
T ss_dssp             HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-C-EEEGGGSHHHHHH-HHTHHH
T ss_pred             HHHHhcCCCeEEEeCCCCcCHHHHHHHHhcCccccccccC--chhhHHHhhhhcccc-c-eecccccccccch-hhhHHH
Confidence            99999999999999985 6788999999999999999886  999999999999886 4 4566778999987 999999


Q ss_pred             HHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhc------CCCcEEEEEeCCCCccCC
Q 043209          166 PEIWEGTRG-QVDIFVSGIGTGGTVSGVGNFLKKK------NPEIKVYGVEPAESAILN  217 (221)
Q Consensus       166 ~Ei~~q~~~-~~d~vv~p~G~Gg~~~Gi~~~~~~~------~~~~kvigVe~~~s~~~~  217 (221)
                      .||++|+.+ .+|++++|+|+||+++|++.+|+..      .+.+++++||+++++++.
T Consensus       267 ~Ei~~ql~~~~pd~v~vp~G~gg~~~g~~~g~~~l~~~G~~~~~P~~~~v~a~~~~~~~  325 (477)
T d1e5xa_         267 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRMVCAQAANANPLY  325 (477)
T ss_dssp             HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEETTSSTHH
T ss_pred             HHHHHhhccccceeeeecccCCcchhhHHHHHHHHhhcCccccCceEEEEeccchhhHH
Confidence            999999964 5999999999999999999999875      246799999999998763

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.3e-40  Score=283.36  Aligned_cols=198  Identities=24%  Similarity=0.262  Sum_probs=174.3

Q ss_pred             HHhhcccCCCceeeccc--ccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHH
Q 043209           10 NDITELIGNTPMVYLNN--IVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMAC   87 (221)
Q Consensus        10 ~~~~~~~~~TPl~~~~~--l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~   87 (221)
                      +.+++.+|+|||+++++  ++...|++||+|+|++|||||||||++.+++.++.++|     .++++++|+||||.++|+
T Consensus        20 ~~i~~~~gnTPLv~l~~~~l~~~~g~~i~~K~E~~nptGSfK~R~a~~~i~~a~~~g-----~~~iv~~SsGN~g~a~a~   94 (351)
T d1v7ca_          20 PVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGG-----AQAVACASTGNTAASAAA   94 (351)
T ss_dssp             CCCCSCCCCCCEEECCCCHHHHTTTEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTT-----CSEEEEECSSHHHHHHHH
T ss_pred             CccccCCCCCCCeECCCcchhhccCCEEEEEEcCCCCccChHHHHHHHHHHHHHhcC-----CCeeeeeccccHHHHHHH
Confidence            34677889999999875  56678899999999999999999999999999999987     456999999999999999


Q ss_pred             HHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCCCCCCccHHHHHhhHHH
Q 043209           88 FAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQFKNPANPKTHYETTGP  166 (221)
Q Consensus        88 ~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  166 (221)
                      +|+++|++|+|+||.+. +..++..++.+||+|+.++.+  ++++.+.+++++++. ++++. ++.|+.++. ||.|++.
T Consensus        95 ~a~~~g~~~~i~~p~~~~~~~~~~~~~~~Ga~vi~~~~~--~~~~~~~a~~l~~~~-~~~~~-~~~~~~~~~-g~~t~~~  169 (351)
T d1v7ca_          95 YAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALV-NSVNPHRLE-GQKTLAF  169 (351)
T ss_dssp             HHHHHTCEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SCEEC-STTSHHHHH-HHTHHHH
T ss_pred             HHhhhcccceeecCCchHHHHHHHhhhcCCCceEeeccc--cchhhhhHHHHhhhh-ccccc-cccCchhhh-hhhhHHH
Confidence            99999999999999875 567888899999999999876  889999999999987 56655 455777775 9999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhc------CCCcEEEEEeCCCCccCC
Q 043209          167 EIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKK------NPEIKVYGVEPAESAILN  217 (221)
Q Consensus       167 Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~------~~~~kvigVe~~~s~~~~  217 (221)
                      ||++|++..+|++++++|+||+.+|++.+++..      ++.+++++|++.++.++.
T Consensus       170 Ei~eQl~~~~d~~~~~~g~gg~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  226 (351)
T d1v7ca_         170 EVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQAAGAAPLV  226 (351)
T ss_dssp             HHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEEGGGCHHH
T ss_pred             HHHHHHhhhccceeeeecccCCcchhHHHHHHHhhcccccCCcceeeeeccccchhh
Confidence            999999888999999999999999999987754      378999999999876654

>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=3e-38  Score=274.07  Aligned_cols=199  Identities=19%  Similarity=0.199  Sum_probs=162.3

Q ss_pred             cccC-CCceeecccccCCC-CCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           14 ELIG-NTPMVYLNNIVDGC-KARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        14 ~~~~-~TPl~~~~~l~~~~-g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      .+++ +|||+++++|++.+ +++||+|+|++|||||||||++.+++..|.+.|.    .+.++++|+||||.++|++|+.
T Consensus        45 ~~~~rpTPLi~~~~Ls~~lgg~~Iy~K~E~lnptGS~KdR~a~~~i~~a~~~G~----~~~v~~~s~Gn~g~a~A~aaa~  120 (386)
T d1v8za1          45 TWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK----TRLIAETGAGQHGVATAMAGAL  120 (386)
T ss_dssp             HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHHH
T ss_pred             hcCCCCCcceEhHhhHHhcCCCeEEEEeccCCCCCCccchHHHHHHHHHhhcCC----ceeEeecccchHHHHHHHHHHH
Confidence            3466 69999999999887 4899999999999999999999999999999996    5668888999999999999999


Q ss_pred             cCCeEEEEecCC---CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHH-HhhCCCee-----ecCCCCCCccHHHHH
Q 043209           92 KGYKLILVMPAF---MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEEL-LNKIPTSF-----NPHQFKNPANPKTHY  161 (221)
Q Consensus        92 ~g~~~~ivvp~~---~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~-~~~~~~~~-----~~~~~~n~~~~~~g~  161 (221)
                      +|++|+||||..   ....++..++.+||+|+.++.. ..+.++...+.+. ........     ..++++++.++..++
T Consensus       121 ~G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (386)
T d1v8za1         121 LGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQ  200 (386)
T ss_dssp             TTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHH
T ss_pred             cCCcccccccchhhhhhHHHHHHHHhcCCeEEEecCCcchHHHHHHHHHHHHHhhhhhhhhccccccCccccchhhhccc
Confidence            999999999853   4567899999999999998753 3456665555443 33322222     234455666676789


Q ss_pred             hhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          162 ETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       162 ~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      .+++.|+.+|+    +..||+||+|+|+|++++|++.++++ ++++++|+|||.+++...
T Consensus       201 ~~~~~Ei~~q~~~~~g~~pd~vv~~vGgG~~~~g~~~~~~~-~~~v~iigvep~g~~~~~  259 (386)
T d1v8za1         201 SVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFVN-DKKVKLVGVEAGGKGLES  259 (386)
T ss_dssp             HHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGG
T ss_pred             hhhhhhHHHHHHHhcCCCCCEEEECCCChHHHHHHHHHhhh-ccCceEEEEecCcccccc
Confidence            99999998887    34589999999999999999887655 789999999998876554

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=1.1e-37  Score=270.60  Aligned_cols=200  Identities=18%  Similarity=0.191  Sum_probs=160.8

Q ss_pred             hcccCC-CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHH
Q 043209           13 TELIGN-TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAA   91 (221)
Q Consensus        13 ~~~~~~-TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~   91 (221)
                      ..++|+ |||+++++|++.+|++||+|+|++|||||||||++.+++..|++.|+    ++.++++|+||||.++|++|++
T Consensus        49 ~~~~grpTPL~~~~~Ls~~lg~~IylK~E~lnptGS~K~R~a~~~i~~A~~~G~----~~iv~easaGN~g~a~A~aaa~  124 (390)
T d1qopb_          49 KNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK----SEIIAETGAGQHGVASALASAL  124 (390)
T ss_dssp             HHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHHH
T ss_pred             HhcCCCCchhhEhHhhhhhhCCEEEEEEecCCcccccchhHHHHHHHHHhhcCC----ceeeeehhHHHHHHHHHHHHHh
Confidence            345656 99999999999999999999999999999999999999999999996    5667889999999999999999


Q ss_pred             cCCeEEEEecCCCC---HHHHHHHHHcCCEEEEeCC-CCChhHHHHHH-HHHHhhCCCeeecCCCCC-Cc----cHHHHH
Q 043209           92 KGYKLILVMPAFMS---LEKRIILQAYGAQLILTNA-EMGIDEEFRIV-EELLNKIPTSFNPHQFKN-PA----NPKTHY  161 (221)
Q Consensus        92 ~g~~~~ivvp~~~~---~~~~~~l~~~Ga~V~~v~~-~~~~~~~~~~a-~~~~~~~~~~~~~~~~~n-~~----~~~~g~  161 (221)
                      +|++|+||||...+   ..++..|+.+||+|+.++. ..++.+....+ +++.......+|+....+ +.    ....++
T Consensus       125 ~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (390)
T d1qopb_         125 LGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQ  204 (390)
T ss_dssp             HTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHTT
T ss_pred             ccCceEEeecccccccchHHHHHHHhcCceEEEecCCchhhhHhHHHHHHHHhhhhhhhhhccccccccccccccccchh
Confidence            99999999998544   6678999999999999964 22455554444 444444434444433322 21    122378


Q ss_pred             hhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccCC
Q 043209          162 ETTGPEIWEGT----RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAILN  217 (221)
Q Consensus       162 ~t~~~Ei~~q~----~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~~  217 (221)
                      .+++.|+.+|+    +..||+||+|+|+|++++|++.+|++ .+.+++++++|.+....+
T Consensus       205 ~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~~~f~~-~~~~~~ig~ep~~~g~~~  263 (390)
T d1qopb_         205 RMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFIN-DTSVGLIGVEPGGHGIET  263 (390)
T ss_dssp             THHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEEEEETBGGG
T ss_pred             hhhcchhHHHHHHHcCCccceEEecccccchhhheeccccc-ccceeEeccccccccccc
Confidence            89999998775    45699999999999999999999976 567999999998765443

>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=9.3e-35  Score=244.81  Aligned_cols=206  Identities=20%  Similarity=0.171  Sum_probs=159.4

Q ss_pred             chhHHhhcccCCCceeecccccCCCCCeEEEEeCCCC--CCCchhhHHHHHHHHHHHHcCCCCCCCe-EEEeeCCChHHH
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCKARIAAKLEMME--PCSSVKDRIAFSMIKDAEEKGLITPGKT-VLIECTSGNTGI   83 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~~--ptGs~K~R~a~~~~~~a~~~g~~~~g~~-~vv~assGN~~~   83 (221)
                      ..+++++...++|||+++++|++.+|++||+|+|++|  ||||||||++.+++.+++++|.    .. .++++|+|||+.
T Consensus        10 ~~~p~i~l~~~~TPL~~~~~L~~~~G~~v~iK~Ed~~~~~tgS~K~R~~~~~i~~a~~~g~----~~~~~~~~s~gN~g~   85 (325)
T d1j0aa_          10 AKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA----DVVITVGAVHSNHAF   85 (325)
T ss_dssp             TTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC----SEEEEECCTTCHHHH
T ss_pred             HhCCcccCCCCCCceeEHHHhHHHHCCEEEEEecCCCCCCcchhHHHHHHHHHHHHHHCCC----CeeEEEeeCcchHHH
Confidence            3446788999999999999999999999999999988  9999999999999999998884    23 244568899999


Q ss_pred             HHHHHHHHcCCeEEEEecCCCCHHHHHHHHHc---CCEEEEeCCCCChh-HHHHHHHHHHhhCCCeeecCCCCCCccHHH
Q 043209           84 GMACFAAAKGYKLILVMPAFMSLEKRIILQAY---GAQLILTNAEMGID-EEFRIVEELLNKIPTSFNPHQFKNPANPKT  159 (221)
Q Consensus        84 alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~---Ga~V~~v~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~  159 (221)
                      |+|++|+.+|++|++|+|...+..+...+..+   |++++..+...... .....++....+....+++.+..+......
T Consensus        86 a~A~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (325)
T d1j0aa_          86 VTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTL  165 (325)
T ss_dssp             HHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHHHT
T ss_pred             HHHHHHhhhcCceEEEeecccccchhhhhccccceeEEeccCcccccchHHHHHHHHHHHhhccCceeeecCCCcccccc
Confidence            99999999999999999998766554444433   33443333331111 122333333333334555555444334445


Q ss_pred             HHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCccC
Q 043209          160 HYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAIL  216 (221)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~~  216 (221)
                      ++.+++.|+.+|.+..+|+||+|+|+|++++|++.+++...+++++++|++...+..
T Consensus       166 ~~~~~~~e~~~~~~~~~d~vv~~~G~G~~~~gi~~~~~~~~~~~~v~~v~~~~~~~~  222 (325)
T d1j0aa_         166 GYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGRFGEV  222 (325)
T ss_dssp             HHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSSCSSS
T ss_pred             ccchhhcccccccccccceeecccccchhhhhHHHHHHhhCccccccccccccchhh
Confidence            889999999999988899999999999999999999999999999999999987654

>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Pseudomonas sp., strain ACP [TaxId: 306]

Probab=100.00  E-value=2.4e-32  Score=228.86  Aligned_cols=202  Identities=19%  Similarity=0.105  Sum_probs=154.5

Q ss_pred             hHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCch---hhHHHHHHHHHHHHcCCCCCCCe-EEEeeCCChHH
Q 043209            9 ANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSV---KDRIAFSMIKDAEEKGLITPGKT-VLIECTSGNTG   82 (221)
Q Consensus         9 ~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~---K~R~a~~~~~~a~~~g~~~~g~~-~vv~assGN~~   82 (221)
                      ++|+++.+++|||+++++|++.+|  ++||+|+|++||+|||   |||++.+++.+++++|.    +. .++++|+|||+
T Consensus         6 ~~r~~l~~g~TPL~~~~~L~~~lg~~~~i~~K~E~~~ptgS~~gnK~R~~~~~i~~a~~~g~----~~v~~~~~s~gN~g   81 (338)
T d1tyza_           6 FPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC----DTLVSIGGIQSNQT   81 (338)
T ss_dssp             SCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHHHHHHHHHTTC----CEEEEEEETTCHHH
T ss_pred             CCccccCCCCCceeEhHHHHHHHCCCCEEEEEECCCCCCcccccCHHHHHHHHHHHHHHCCC----CeEEEEccCCchHH
Confidence            567899999999999999999887  5899999999999999   99999999999999984    33 23456889999


Q ss_pred             HHHHHHHHHcCCeEEEEecCCCC--------HHHHHHHHHcCCEEEEeCCCCCh--h-HHHHHHHHHHhhCCCeeecCCC
Q 043209           83 IGMACFAAAKGYKLILVMPAFMS--------LEKRIILQAYGAQLILTNAEMGI--D-EEFRIVEELLNKIPTSFNPHQF  151 (221)
Q Consensus        83 ~alA~~a~~~g~~~~ivvp~~~~--------~~~~~~l~~~Ga~V~~v~~~~~~--~-~~~~~a~~~~~~~~~~~~~~~~  151 (221)
                      .|+|++|+.+|++|++|+|...+        ..+.+.++.+|+.++.++...+.  . ...+.+....+...+.++..++
T Consensus        82 ~A~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1tyza_          82 RQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAG  161 (338)
T ss_dssp             HHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEECCCC-------CHHHHHHHHHHHTTCCEEEECGG
T ss_pred             HHHHHHHhhccCcEEEEECCCcchhhhhhhhccccceeeeeccccccccCCcchhHHHHHHHHHhhhhhcccceeeeccc
Confidence            99999999999999999998654        34566788999999998764221  1 2222333333444455655554


Q ss_pred             CCCccHHHHHhhHHHHHH-----HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCcc
Q 043209          152 KNPANPKTHYETTGPEIW-----EGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESAI  215 (221)
Q Consensus       152 ~n~~~~~~g~~t~~~Ei~-----~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~~  215 (221)
                      .++.... +..+.+.|..     ++....+|+||+|+|+|++++|++.+|+...+.++++++++..++.
T Consensus       162 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~iv~~~G~G~~~~G~~~~~~~~~~~~~~~~~~~~~~~~  229 (338)
T d1tyza_         162 CSDHPLG-GLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDASAKPA  229 (338)
T ss_dssp             GTSSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGGGEEEEECSSCHH
T ss_pred             CccCccc-cccccchHHHHHHHHHhcCCCccEEEEeecChhHHHHHHHHHHHHhhhhcccceeeccchh
Confidence            4433332 3344444433     3344679999999999999999999999999999999999988754

>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Yeast (Hansenula saturnus) [TaxId: 4906]

Probab=99.97  E-value=2.3e-31  Score=223.56  Aligned_cols=203  Identities=17%  Similarity=0.131  Sum_probs=160.1

Q ss_pred             chhHHhhcccCCCceeecccccCCCC--CeEEEEeCCCCCCCch---hhHHHHHHHHHHHHcCCCCCCCe-EEEeeCCCh
Q 043209            7 AIANDITELIGNTPMVYLNNIVDGCK--ARIAAKLEMMEPCSSV---KDRIAFSMIKDAEEKGLITPGKT-VLIECTSGN   80 (221)
Q Consensus         7 ~~~~~~~~~~~~TPl~~~~~l~~~~g--~~i~~K~E~~~ptGs~---K~R~a~~~~~~a~~~g~~~~g~~-~vv~assGN   80 (221)
                      ..++++.+.+++|||+++++|++.+|  .+||+|+|++||+|||   |+|++.+++.+++++|.    .. .++++|+||
T Consensus         4 ~~~~~~~l~~~~TPl~~~~~L~~~lg~~~~i~~K~E~~~p~GSf~gnK~R~~~~~i~~a~~~g~----~~i~~~~as~gN   79 (341)
T d1f2da_           4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY----THLVSIGGRQSN   79 (341)
T ss_dssp             TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC----SEEEEEEETTCH
T ss_pred             ccccCccCCCCCCceeEHHHHHHHHCCCCEEEEEECCCCCCCccccChHHHHHHHHHHHHHCCC----CEEEEEccCcch
Confidence            34677889999999999999999988  4899999999999999   99999999999999884    22 235678899


Q ss_pred             HHHHHHHHHHHcCCeEEEEecCCCCHH-----------HHHHHHHcCCEEEEeCCCCCh---hHHHHHHHHHHhhCCCee
Q 043209           81 TGIGMACFAAAKGYKLILVMPAFMSLE-----------KRIILQAYGAQLILTNAEMGI---DEEFRIVEELLNKIPTSF  146 (221)
Q Consensus        81 ~~~alA~~a~~~g~~~~ivvp~~~~~~-----------~~~~l~~~Ga~V~~v~~~~~~---~~~~~~a~~~~~~~~~~~  146 (221)
                      ||.|+|++|+.+|++|++|+|.+.+..           ++..++.+|+++..++...+.   .................+
T Consensus        80 ~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (341)
T d1f2da_          80 QTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPY  159 (341)
T ss_dssp             HHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHHhcCceEEEccCCCCHHHHHHHHHhhccceechhhccccccccCCchhhHHHHHHHHHHHHHHhhccCcc
Confidence            999999999999999999999976543           466778999999999764221   123333333444443444


Q ss_pred             ecCCC--CCCccHHHHHhhHHHHHHHhh---CCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCCCc
Q 043209          147 NPHQF--KNPANPKTHYETTGPEIWEGT---RGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAESA  214 (221)
Q Consensus       147 ~~~~~--~n~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~s~  214 (221)
                      ++..+  .++... .++.+.+.++.+|+   ...+|++|+|+|+|++++|++.+++...+.++++++++..+.
T Consensus       160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  231 (341)
T d1f2da_         160 PIPAGCSEHKYGG-LGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDASFTS  231 (341)
T ss_dssp             EECGGGTTSTTTT-THHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECSSCH
T ss_pred             ccCCcccccccch-hhehhhhHHHHHHHhhccCCceEEEEecccccchhhHHHHHHHhcccccccccccccch
Confidence            44333  344444 36677777776654   457999999999999999999999999999999999998764

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=9.4e-19  Score=151.58  Aligned_cols=185  Identities=12%  Similarity=0.043  Sum_probs=139.4

Q ss_pred             CCceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHc-CCeE
Q 043209           18 NTPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAK-GYKL   96 (221)
Q Consensus        18 ~TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~-g~~~   96 (221)
                      ..|+.++.       .++|+.-..+.||+|||||++..+...+...+.  .++..|++|||||+|.|.+.+++.. ++++
T Consensus        83 ~~p~~~~~-------~~~~~lELfhGPT~aFKD~a~~~~~~~~~~~~~--~~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~  153 (428)
T d1vb3a1          83 PAPVANVE-------SDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAG--DKPVTILTATSGDTGAAVAHAFYGLPNVKV  153 (428)
T ss_dssp             CCCEEEEE-------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHTT--TCCEEEEEECSSSHHHHHHHHTTTCTTEEE
T ss_pred             Cccceecc-------CCceeeeeccCCCcccccchhhHHHHHHhhhcc--cccceeeecCCCCcchhHHHHHhCccccce
Confidence            35665543       268988888889999999998876554443321  2246699999999999999888766 6889


Q ss_pred             EEEecCC-CCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCC----CeeecCCCCCCccHHHHHhhHHHHHHHh
Q 043209           97 ILVMPAF-MSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIP----TSFNPHQFKNPANPKTHYETTGPEIWEG  171 (221)
Q Consensus        97 ~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  171 (221)
                      +|+.|.. ++..+.++|..+|++|+.+.-+++||+|++.++++..+.+    ....--..-|+..++ ++.+.+.|++.|
T Consensus       154 ~vl~P~g~vS~~Q~~Qmtt~g~nv~vi~V~G~fDDcq~lvk~~f~d~~~~~~~~l~s~NSIN~~Rl~-~Q~vyyf~a~~q  232 (428)
T d1vb3a1         154 VILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLL-AQICYYFEAVAQ  232 (428)
T ss_dssp             EEEEETTCSCHHHHHHHHSCCTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCSTTSHHHHH-HTTHHHHHHHTT
T ss_pred             EEEecCCCCcHHHHHHHhhccCCceEEecCCChhHHHHHHHHHhhhhhhhhcCCeeeecccChhHHh-hhHHHHHHHHHH
Confidence            9999974 8889999999999988765545569999999999886541    011111223566665 899999999999


Q ss_pred             hCC---CCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209          172 TRG---QVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE  212 (221)
Q Consensus       172 ~~~---~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~  212 (221)
                      +..   .++.++||+|++|.+.+.+.+.+.--|--+++....++
T Consensus       233 l~~~~~~~~~~~VPtGNfGni~Ag~~Ak~mGLPi~~~i~AtN~N  276 (428)
T d1vb3a1         233 LPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN  276 (428)
T ss_dssp             SCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEECSC
T ss_pred             hccccCCceEEeccHHHHHHHHHHHHhhhcCCceeeeecccccC
Confidence            853   47789999999999999888887766777777666554

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=1.7e-10  Score=101.01  Aligned_cols=190  Identities=17%  Similarity=0.064  Sum_probs=126.8

Q ss_pred             CceeecccccCCCCCeEEEEeCCCCCCCchhhHHHHHHHHH---HHHc--CCC---CCCCeEEEeeCCChHHHHHHHHHH
Q 043209           19 TPMVYLNNIVDGCKARIAAKLEMMEPCSSVKDRIAFSMIKD---AEEK--GLI---TPGKTVLIECTSGNTGIGMACFAA   90 (221)
Q Consensus        19 TPl~~~~~l~~~~g~~i~~K~E~~~ptGs~K~R~a~~~~~~---a~~~--g~~---~~g~~~vv~assGN~~~alA~~a~   90 (221)
                      +||.++.   .....++|+--=.+.||.+|||.++..+...   .+++  ..+   ...+..|++||||.+|.|.+.+.+
T Consensus        96 ~pl~~~~---~~~~~~~~vlELfhGPT~aFKD~a~~~l~~~~~~~l~~~~~~~~~~~~~~~~il~aTSGDTG~Aa~~af~  172 (511)
T d1kl7a_          96 TPLVQNV---TGDKENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTGSAAIYGLR  172 (511)
T ss_dssp             SCEECCT---TCSSSCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEEECSSSHHHHHHHHHT
T ss_pred             Ccccccc---cCCCCceEEEeeccCCcccccCcchhhHHHHHHHHHHhcccccccccCceEEEEEecCCCccHHHHHHhc
Confidence            6776642   1223468876556679999999988665533   2221  000   112567999999999999999887


Q ss_pred             Hc-CCeEEEEecCC-CCHHHHHHHHHcCC-EEEEeCCCCChhHHHHHHHHHHhhCC--CeeecCCCCCCccHH------H
Q 043209           91 AK-GYKLILVMPAF-MSLEKRIILQAYGA-QLILTNAEMGIDEEFRIVEELLNKIP--TSFNPHQFKNPANPK------T  159 (221)
Q Consensus        91 ~~-g~~~~ivvp~~-~~~~~~~~l~~~Ga-~V~~v~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~n~~~~~------~  159 (221)
                      .. +++++|+.|.. ++..+.++|...++ +|+.+.-+++||||+..++++..+..  ..+.+ ..-|..||.      .
T Consensus       173 ~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~G~fDDcq~~vk~~f~d~~~~~~~~l-~s~NSiNw~Rll~Qiv  251 (511)
T d1kl7a_         173 GKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNCQDIVKAIFGDKEFNSKHNV-GAVNSINWARILAQMT  251 (511)
T ss_dssp             TCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHHHHHHHHHHHHHCSSCC--CCB-CCCCSCCHHHHHHHHH
T ss_pred             CCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEeccChHHHHHHHHHHHhhhhhhccccc-ccccceeehhhhhhHH
Confidence            54 89999999995 88888899988754 77766555569999999999987753  11222 223555553      1


Q ss_pred             HHhhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCcEEEEEeCCC
Q 043209          160 HYETTGPEIWEGTRGQVDIFVSGIGTGGTVSGVGNFLKKKNPEIKVYGVEPAE  212 (221)
Q Consensus       160 g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~~~kvigVe~~~  212 (221)
                      .|-+....+.....+++=.++||+|+-|.+.+-+.+-+.=-|--|+|+...++
T Consensus       252 yYf~ay~q~~~~~~~~~v~f~VPTGNfGni~Ag~~Ak~MGLPI~klivAtN~N  304 (511)
T d1kl7a_         252 YYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNEN  304 (511)
T ss_dssp             HHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEECSC
T ss_pred             HHHHHHHHHhhhccCCeeEEEeccCcHHHHHHHHHHHhcCCChheEEEecCCc
Confidence            23333333333222344579999999998888777655444666888877665

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.051  Score=39.07  Aligned_cols=72  Identities=25%  Similarity=0.327  Sum_probs=52.5

Q ss_pred             HHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHH
Q 043209           59 DAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFR  133 (221)
Q Consensus        59 ~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~  133 (221)
                      ++.++..+.+|.+ |+..++|..|...+..++.+|.+-++++.  ..+.+++..+.+||+.+....+.+..+..+
T Consensus        17 ~a~~~~~~~~gd~-VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d--~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~   88 (171)
T d1pl8a2          17 HACRRGGVTLGHK-VLVCGAGPIGMVTLLVAKAMGAAQVVVTD--LSATRLSKAKEIGADLVLQISKESPQEIAR   88 (171)
T ss_dssp             HHHHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEECSSCCHHHHHH
T ss_pred             HHHHHhCCCCCCE-EEEECCCccHHHHHHHHHHcCCceEEecc--CCHHHHHHHHHhCCcccccccccccccccc
Confidence            3445556778876 56667899999999999999996666663  468899999999998877665433433333

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.26  E-value=0.02  Score=41.88  Aligned_cols=61  Identities=26%  Similarity=0.274  Sum_probs=51.0

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      +.+.+++|++.+|.+.+|.-|.++...|+..|.+++.++.   +.++.+.++.+|++.+....+
T Consensus        23 ~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~---~~~~~~~~~~~Ga~~vi~~~~   83 (182)
T d1v3va2          23 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAFNYKT   83 (182)
T ss_dssp             TTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTS
T ss_pred             HHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC---CHHHHHHHHhhhhhhhccccc
Confidence            4566788888888889999999999999999998887763   467899999999998766554

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.15  E-value=0.12  Score=36.71  Aligned_cols=59  Identities=22%  Similarity=0.241  Sum_probs=44.9

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++..+.+|.+.+| .++|..|...+..++.+|.+++++-   .+..+++.++.+|++...+..
T Consensus        20 ~~~~~~~g~~vlV-~G~G~vG~~~~~~ak~~Ga~vi~v~---~~~~r~~~a~~~ga~~~~~~~   78 (170)
T d1e3ja2          20 RRAGVQLGTTVLV-IGAGPIGLVSVLAAKAYGAFVVCTA---RSPRRLEVAKNCGADVTLVVD   78 (170)
T ss_dssp             HHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEECC
T ss_pred             HHhCCCCCCEEEE-EcccccchhhHhhHhhhcccccccc---hHHHHHHHHHHcCCcEEEecc
Confidence            3445778877455 5789999999999999998755543   468899999999998766543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.11  E-value=0.025  Score=40.98  Aligned_cols=60  Identities=23%  Similarity=0.248  Sum_probs=48.1

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +.+.+.||++.+|.+.+|..|.++...|+..|.++++..   .+..+.+.++.+||+.+.-..
T Consensus        22 ~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~---~s~~k~~~~~~lGa~~vi~~~   81 (179)
T d1qora2          22 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV---GTAQKAQSALKAGAWQVINYR   81 (179)
T ss_dssp             TTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEE---SSHHHHHHHHHHTCSEEEETT
T ss_pred             HHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecc---cchHHHHHHHhcCCeEEEECC
Confidence            456788888877778889999999999999999866665   357888889999998665433

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.65  E-value=0.064  Score=38.22  Aligned_cols=58  Identities=19%  Similarity=0.215  Sum_probs=44.3

Q ss_pred             CCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           64 GLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        64 g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      ..+++|++ |+..++|..|...+..++.+|.+++++.   .++.+++..+.+||+......+
T Consensus        23 ~~~~~g~~-VlV~GaG~vG~~~~~~ak~~G~~Vi~~~---~~~~~~~~a~~~Ga~~~i~~~~   80 (166)
T d1llua2          23 TNARPGQW-VAISGIGGLGHVAVQYARAMGLHVAAID---IDDAKLELARKLGASLTVNARQ   80 (166)
T ss_dssp             HTCCTTCE-EEEECCSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEETTT
T ss_pred             hCCCCCCE-EEEeeccccHHHHHHHHHHcCCccceec---chhhHHHhhhccCccccccccc
Confidence            34677777 5556779999999999999997755553   4688899999999987665443

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.65  E-value=0.098  Score=37.87  Aligned_cols=74  Identities=22%  Similarity=0.279  Sum_probs=50.7

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHH
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEEL  138 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~  138 (221)
                      +.+.+.+|.+ |+..++|..|......|+.+|.+-++++.  .++.+++.++.+||+.+....+.+..+..+...++
T Consensus        22 ~~~~~~~G~~-VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~   95 (182)
T d1vj0a2          22 EYPESFAGKT-VVIQGAGPLGLFGVVIARSLGAENVIVIA--GSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI   95 (182)
T ss_dssp             TCSSCCBTCE-EEEECCSHHHHHHHHHHHHTTBSEEEEEE--SCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHH
T ss_pred             HHhCCCCCCE-EEEECCCccchhheecccccccccccccc--cccccccccccccceEEEeccccchHHHHHHHHHh
Confidence            4566778877 44456799999999999999986444442  36888899999999776654443343444444444

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.61  E-value=0.014  Score=43.10  Aligned_cols=62  Identities=21%  Similarity=0.185  Sum_probs=49.2

Q ss_pred             HcCCCCCCCeEEEe-eCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeC
Q 043209           62 EKGLITPGKTVLIE-CTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        62 ~~g~~~~g~~~vv~-assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +.+.++||++.+|. +.+|..|.+....|+.+|.++++++.... ...+.+.++.+||+.+...
T Consensus        22 ~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~   85 (189)
T d1gu7a2          22 HYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE   85 (189)
T ss_dssp             SSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH
T ss_pred             HHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec
Confidence            45678888776664 67789999999999999999998886543 4567788999999887754

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.59  E-value=0.065  Score=38.59  Aligned_cols=60  Identities=23%  Similarity=0.373  Sum_probs=46.8

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +.+.+++|++.+|...+|..|.+....|+.+|.++++.+.   ++.+++.++.+|++-+.-..
T Consensus        22 ~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~---~~~~~~~~~~~Ga~~vi~~~   81 (174)
T d1yb5a2          22 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVFNHR   81 (174)
T ss_dssp             TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETT
T ss_pred             HHhCCCCCCEEEEEeccccccccccccccccCcccccccc---cccccccccccCcccccccc
Confidence            4566888887666666799999999999999998777763   46788899999997655433

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.57  E-value=0.019  Score=36.28  Aligned_cols=57  Identities=19%  Similarity=0.321  Sum_probs=43.7

Q ss_pred             HHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCC
Q 043209           58 KDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGA  117 (221)
Q Consensus        58 ~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga  117 (221)
                      ....+.+...++.+.+|...+|.-|....-.++.+|.+++....   ++++.+.++.+||
T Consensus        21 ~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~---s~~k~~~~~~lGA   77 (77)
T d1o8ca2          21 MALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG---RESTHEYLKSLGA   77 (77)
T ss_dssp             HHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES---CGGGHHHHHHHTE
T ss_pred             HHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHHCCC
Confidence            33455566667788788888899999999999999998777764   4567777777875

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.42  E-value=0.12  Score=38.22  Aligned_cols=74  Identities=18%  Similarity=0.219  Sum_probs=52.9

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHh
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLN  140 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~  140 (221)
                      .+...+.+|.+ |+..+.|..|...+..++.+|...++++.  .++.|++..+.+|++.+....+.   +..+...++..
T Consensus        18 ~~~a~v~~G~t-VlV~GaG~vGl~a~~~ak~~ga~~Vi~~d--~~~~rl~~a~~~Ga~~~~~~~~~---~~~~~i~~~t~   91 (195)
T d1kola2          18 AVTAGVGPGST-VYVAGAGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIADLSLDT---PLHEQIAALLG   91 (195)
T ss_dssp             HHHTTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEEETTSSS---CHHHHHHHHHS
T ss_pred             HHHhCCCCCCE-EEEECcCHHHHHHHHHHHhhcccceeeec--ccchhhHhhhhccccEEEeCCCc---CHHHHHHHHhC
Confidence            34456888877 55567899999989999999987666663  36889999999999987655442   33344444443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.07  E-value=0.11  Score=37.06  Aligned_cols=62  Identities=21%  Similarity=0.209  Sum_probs=46.5

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      .++..+.++.+.+|...+|..|..++..++..|...++++..  +..+++.++.+|++.+....
T Consensus        20 l~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~--~~~~~~~~~~~Ga~~~i~~~   81 (170)
T d1jvba2          20 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV--REEAVEAAKRAGADYVINAS   81 (170)
T ss_dssp             HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES--SHHHHHHHHHHTCSEEEETT
T ss_pred             HHHhCCCCCCEEEEEeccccceeeeeeccccccccccccccc--chhhHHHHHHcCCceeeccC
Confidence            344557788775555557999999999999999876666644  57899999999997665443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.02  E-value=0.15  Score=36.05  Aligned_cols=57  Identities=23%  Similarity=0.270  Sum_probs=45.0

Q ss_pred             CCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           65 LITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        65 ~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      .+.||.+ |+..++|..|...+..++..|.+++++   +.+..+++.++.+|++.+....+
T Consensus        24 ~~~~g~~-vlv~G~G~iG~~a~~~a~~~g~~v~~~---~~~~~r~~~~k~~Ga~~~~~~~~   80 (168)
T d1rjwa2          24 GAKPGEW-VAIYGIGGLGHVAVQYAKAMGLNVVAV---DIGDEKLELAKELGADLVVNPLK   80 (168)
T ss_dssp             TCCTTCE-EEEECCSTTHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCSEEECTTT
T ss_pred             CCCCCCE-EEEeecccchhhhhHHHhcCCCeEecc---CCCHHHhhhhhhcCcceeccccc
Confidence            3678876 555577999999999999999975444   34688999999999998877655

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.85  E-value=0.095  Score=37.75  Aligned_cols=60  Identities=27%  Similarity=0.438  Sum_probs=47.7

Q ss_pred             HcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           62 EKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        62 ~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +.+.+++|++.+|.+.+|..|..+.-.|+.+|.+.++.+.   +..+.+.++.+|++-+....
T Consensus        19 ~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~---~~~~~~~l~~~Ga~~vi~~~   78 (183)
T d1pqwa_          19 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVGDSR   78 (183)
T ss_dssp             TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEEETT
T ss_pred             HHhCCCCCCEEEEECCCCCcccccchhhccccccceeeec---ccccccccccccccccccCC
Confidence            4556788887666677899999999999999998888773   46788899999998765433

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.74  E-value=0.13  Score=37.18  Aligned_cols=60  Identities=22%  Similarity=0.129  Sum_probs=46.0

Q ss_pred             HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +.+...+.+|.+ |+..+.|-.|...+..|+.+|.+-++++.  .+..|++..+.+||+....
T Consensus        19 a~~~a~~~~g~~-VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d--~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2          19 GAELADIEMGSS-VVVIGIGAVGLMGIAGAKLRGAGRIIGVG--SRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             HHHHTTCCTTCC-EEEECCSHHHHHHHHHHHTTTCSCEEEEC--CCHHHHHHHHHHTCSEEEC
T ss_pred             HHHHhCCCCCCE-EEEEcCCcchhhhhhhhhccccccccccc--chhhhHHHHHhhCcccccc
Confidence            345566888877 44567899999999999999986566663  3688899999999976553

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.47  E-value=0.18  Score=36.14  Aligned_cols=59  Identities=15%  Similarity=0.257  Sum_probs=46.2

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+...+.||.+ |+..+.|--|.+.+..|+.+|.+.+++...  +..|++..+.+|++-+.-
T Consensus        21 ~~~~~~~~g~~-VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~--~~~k~~~a~~~Ga~~~i~   79 (174)
T d1f8fa2          21 INALKVTPASS-FVTWGAGAVGLSALLAAKVCGASIIIAVDI--VESRLELAKQLGATHVIN   79 (174)
T ss_dssp             HTTTCCCTTCE-EEEESCSHHHHHHHHHHHHHTCSEEEEEES--CHHHHHHHHHHTCSEEEE
T ss_pred             HHhhCCCCCCE-EEEeCCCHHHhhhhhcccccccceeeeecc--HHHHHHHHHHcCCeEEEe
Confidence            45566888877 555677999999999999999987777743  578999999999865443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.46  E-value=0.071  Score=38.43  Aligned_cols=58  Identities=24%  Similarity=0.354  Sum_probs=44.9

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      .++..++||++.+|...+|.-|.+....|+.+|.+++++..   +..+++.++.+|++.+.
T Consensus        20 l~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~---~~~~~~~~~~lGa~~~i   77 (171)
T d1iz0a2          20 LKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS---RPEKLALPLALGAEEAA   77 (171)
T ss_dssp             HHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SGGGSHHHHHTTCSEEE
T ss_pred             HHHhCCCCCCEEEEEeccccchhhhhhhhcccccccccccc---cccccccccccccceee
Confidence            34456888888666666799999999999999998766653   34577788899997665

>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: PK C-terminal domain-like
family: MTH1675-like
domain: Hypothetical protein AF0103
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.76  E-value=0.3  Score=35.51  Aligned_cols=76  Identities=20%  Similarity=0.323  Sum_probs=56.6

Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 043209           43 EPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM-------PA--FMSLEKRIILQ  113 (221)
Q Consensus        43 ~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~l~  113 (221)
                      +|.-.+=+..+...+++|.+.|.    +..||.+++|.++..++-+.  .|++.++|-       |.  ..+++..+.|+
T Consensus        11 ~~G~~NT~~~l~~a~~rA~Elgi----~~iVvAStsG~TA~~~~e~~--~g~~lvvVth~~GF~~pg~~e~~~e~~~~L~   84 (190)
T d1vp8a_          11 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR   84 (190)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CeEEEEeCCcHHHHHHHHHh--cCCeEEEEecccCCCCCCcccCCHHHHHHHH
Confidence            34556677788888899999885    66566666799988776655  388887774       21  24688999999


Q ss_pred             HcCCEEEEeCC
Q 043209          114 AYGAQLILTNA  124 (221)
Q Consensus       114 ~~Ga~V~~v~~  124 (221)
                      ..|.+|+.-..
T Consensus        85 ~~G~~V~t~tH   95 (190)
T d1vp8a_          85 KRGAKIVRQSH   95 (190)
T ss_dssp             HTTCEEEECCC
T ss_pred             HcCCEEEEecc
Confidence            99999987543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=93.64  E-value=0.11  Score=37.88  Aligned_cols=64  Identities=19%  Similarity=0.331  Sum_probs=47.6

Q ss_pred             HHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           57 IKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        57 ~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      +....+.+....+.+.+|.+.+|..|.+..-.|+.+|.+++.+..   +..+.+.++.+||+.+.-.
T Consensus        20 ~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~---~~~k~~~~~~lGad~vi~~   83 (177)
T d1o89a2          20 VMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG---RESTHEYLKSLGASRVLPR   83 (177)
T ss_dssp             HHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES---CGGGHHHHHHHTEEEEEEG
T ss_pred             HHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEec---chhHHHHHHhhcccccccc
Confidence            333445554434446788888899999999999999999888774   4556777889999987653

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=93.54  E-value=0.084  Score=38.10  Aligned_cols=63  Identities=21%  Similarity=0.335  Sum_probs=48.7

Q ss_pred             HHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           57 IKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        57 ~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      +..+.+.|...++.+.+|.+.+|.-|.+..-.|+.+|.+++..+..   ..|.+.++.+|++.+..
T Consensus        12 ~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s---~~k~~~~~~lGad~vi~   74 (167)
T d1tt7a2          12 VHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN---REAADYLKQLGASEVIS   74 (167)
T ss_dssp             HHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS---SSTHHHHHHHTCSEEEE
T ss_pred             HHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecC---HHHHHHHHhhcccceEe
Confidence            3445566666566677888888999999999999999998887754   44677788899998753

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.43  Score=36.41  Aligned_cols=74  Identities=15%  Similarity=0.186  Sum_probs=42.7

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcC--CEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYG--AQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~G--a~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      ++..+|+.+++--|.++|....+.|.++++.-.+... ....+.++..|  .+++.+..+ .+.++..+...+..++.
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3677888899999999999988899886655422111 11233455544  455544322 12344445555555443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=93.15  E-value=0.3  Score=34.65  Aligned_cols=61  Identities=25%  Similarity=0.217  Sum_probs=45.9

Q ss_pred             HHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           60 AEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        60 a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +.++..+.||.+.+| .+.|..|......|+.+|.+.+++..   +..+++.++.+|++.+....
T Consensus        22 al~~~~~~~G~~VlI-~GaG~vG~~a~qlak~~Ga~~i~~~~---~~~~~~~a~~lGad~~i~~~   82 (168)
T d1uufa2          22 PLRHWQAGPGKKVGV-VGIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVVNSR   82 (168)
T ss_dssp             HHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEEETT
T ss_pred             HHHHhCCCCCCEEEE-eccchHHHHHHHHhhcccccchhhcc---chhHHHHHhccCCcEEEECc
Confidence            345567889887555 56799999999999999998876543   34567788899998776544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.99  E-value=0.12  Score=37.50  Aligned_cols=67  Identities=25%  Similarity=0.317  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           53 AFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        53 a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      |+..+....+.|...+|++.+|.+.+|.-|.+.--.|+.+|.+++.....   +.|.+.++.+||+.+.-
T Consensus        16 A~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s---~~k~~~~~~lGa~~vi~   82 (176)
T d1xa0a2          16 AALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVLA   82 (176)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCc---hHHHHHHHhcccceeee
Confidence            33344445567777778888888889999999999999999999887744   44667778899998764

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.98  E-value=0.19  Score=35.78  Aligned_cols=58  Identities=24%  Similarity=0.181  Sum_probs=42.7

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .++..+.||.+.+| .+.|..|...+..++.+|.+++++-.   +..|++..+.+||+-+..
T Consensus        20 l~~~~~~~g~~vlI-~GaG~vG~~a~q~ak~~G~~vi~~~~---~~~k~~~a~~lGa~~~i~   77 (168)
T d1piwa2          20 LVRNGCGPGKKVGI-VGLGGIGSMGTLISKAMGAETYVISR---SSRKREDAMKMGADHYIA   77 (168)
T ss_dssp             HHHTTCSTTCEEEE-ECCSHHHHHHHHHHHHHTCEEEEEES---SSTTHHHHHHHTCSEEEE
T ss_pred             HHHhCcCCCCEEEE-ECCCCcchhHHHHhhhcccccccccc---chhHHHHhhccCCcEEee
Confidence            33445788877444 56799999999999999998666543   345778889999975543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.87  E-value=0.22  Score=36.17  Aligned_cols=61  Identities=13%  Similarity=0.175  Sum_probs=43.0

Q ss_pred             CCCCCC--CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           64 GLITPG--KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        64 g~~~~g--~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      +.+++|  ++.+|.+.+|.-|....-.|+.+|.+.++.+... +..+.+..+.+|++.+.-..+
T Consensus        24 ~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~-~e~~~~l~~~~gad~vi~~~~   86 (187)
T d1vj1a2          24 GHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT-QEKCLFLTSELGFDAAVNYKT   86 (187)
T ss_dssp             SCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS-HHHHHHHHHHSCCSEEEETTS
T ss_pred             hCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccch-HHHHhhhhhcccceEEeeccc
Confidence            445555  5666666689999999999999999877766442 333444556799998876554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=92.81  E-value=0.47  Score=36.65  Aligned_cols=74  Identities=18%  Similarity=0.199  Sum_probs=43.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHH-HHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKR-IILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~-~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |++.||+.+++.-|.++|......|.++++.-..... .... +.....|.++..+..+ .+.++..+......++.
T Consensus        25 gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            3677999999999999999988899887766533211 1222 2234556665554322 12334444444444444

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.72  E-value=0.61  Score=35.40  Aligned_cols=74  Identities=19%  Similarity=0.328  Sum_probs=44.9

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHH-HHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEK-RIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~-~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..||+.+++.-|+++|....+.|.++++.-..... ... .+..+.+|.++..+..+ .+.++..+..++..++.
T Consensus         5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4677899999999999999999999986665432111 111 22335667777655332 12344444555554443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.66  E-value=0.82  Score=30.29  Aligned_cols=37  Identities=24%  Similarity=0.199  Sum_probs=32.1

Q ss_pred             CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 043209           67 TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF  103 (221)
Q Consensus        67 ~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~  103 (221)
                      .|+..+|..-++|..|+-++.+|+++|++++++-|..
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~   44 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYA   44 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESST
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence            4555668888999999999999999999999998764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=92.33  E-value=0.35  Score=34.40  Aligned_cols=56  Identities=14%  Similarity=0.166  Sum_probs=43.5

Q ss_pred             CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      +.||.. |+..++|..|...+..++.+|...++++..  ++.|++.++.+|++-+....
T Consensus        30 ~~~g~~-vli~GaG~vG~~~~~~a~~~g~~~vv~~~~--~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2          30 LYPGAY-VAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             CCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHHHHHHHTTCSEEEETT
T ss_pred             cCCCCE-EEEeCCChHHHHHHHHHHhhcCcccccccc--hhHHHHHHhhcccceeecCc
Confidence            567766 666778999999999999999877666633  57899999999997665443

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=92.13  E-value=0.99  Score=34.21  Aligned_cols=74  Identities=20%  Similarity=0.311  Sum_probs=45.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHH-HHH-HHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEK-RII-LQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~-~~~-l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++.-|.++|......|.++++.-..+.. .++ .+. ....|.++..+..+ .+.++..+...+..++.
T Consensus         4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4777888888999999999999999886655433211 111 122 34567777766543 13444555555555544

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=92.03  E-value=0.81  Score=34.80  Aligned_cols=74  Identities=23%  Similarity=0.157  Sum_probs=45.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHH--HcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQ--AYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~--~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..||+.+++.-|+++|......|.++++.-..... ......+.  ..+.+++.+..+ .+.++..+...+..++.
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            4677899999999999999999999986655432111 11122222  245666655322 23455666666666554

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=91.96  E-value=0.35  Score=34.73  Aligned_cols=59  Identities=24%  Similarity=0.190  Sum_probs=47.4

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+...+.+|.+ |+..+.|--|...+..++.+|.+.+++...  +..|++..+.+|++.+.-
T Consensus        21 ~~~a~v~~G~~-VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~--~~~r~~~a~~~Ga~~~i~   79 (174)
T d1e3ia2          21 INTAKVTPGST-CAVFGLGCVGLSAIIGCKIAGASRIIAIDI--NGEKFPKAKALGATDCLN   79 (174)
T ss_dssp             HTTSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEEEC
T ss_pred             HHhhCCCCCCE-EEEECCChHHHHHHHHHHHhCCceeeeecc--chHHHHHHHHhCCCcccC
Confidence            45677888877 555688999999999999999977777743  567888999999987654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=91.75  E-value=0.34  Score=34.74  Aligned_cols=59  Identities=22%  Similarity=0.175  Sum_probs=47.2

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+.+.+++|.+ |+..+.|--|......|+.+|.+.++.+..  +..|++..+.+||+-+.-
T Consensus        20 ~~~a~~~~G~~-VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~--~~~kl~~a~~lGa~~~i~   78 (174)
T d1p0fa2          20 VNTAKVTPGST-CAVFGLGGVGFSAIVGCKAAGASRIIGVGT--HKDKFPKAIELGATECLN   78 (174)
T ss_dssp             HTTTCCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHTTCSEEEC
T ss_pred             HHhhCCCCCCE-EEEECCCchhHHHHHHHHHcCCceeeccCC--hHHHHHHHHHcCCcEEEc
Confidence            45567889876 555678999999999999999877777743  678888899999987764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=91.67  E-value=1  Score=34.36  Aligned_cols=32  Identities=22%  Similarity=0.270  Sum_probs=26.3

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      |+..||+.+++--|.++|......|.++++.-
T Consensus         6 gKvalITGas~GIG~aia~~la~~Ga~V~i~~   37 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRYGAKVVIAD   37 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            46778999999999999999888898866544

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=91.53  E-value=1.8  Score=32.50  Aligned_cols=73  Identities=11%  Similarity=0.145  Sum_probs=50.8

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++.-|.++|......|.++++.-.. ........++.+|.++..+..+ .+.++..+...+..++.
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~-~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVEGADIAIADLV-PAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-CCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-chHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4677999999999999999999999987665433 3455556678888887765432 23455555656655554

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=91.10  E-value=0.43  Score=33.75  Aligned_cols=59  Identities=15%  Similarity=0.204  Sum_probs=44.7

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+.+.++||.+ |+..+.|-.|......++.+|.+.++.+..  +..+++..+.+||+-...
T Consensus        21 ~~~~~~~~G~t-VlI~GaGGvG~~aiq~ak~~G~~~vi~~~~--~~~k~~~ak~lGa~~~i~   79 (176)
T d2fzwa2          21 VNTAKLEPGSV-CAVFGLGGVGLAVIMGCKVAGASRIIGVDI--NKDKFARAKEFGATECIN   79 (176)
T ss_dssp             HTTTCCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHHTCSEEEC
T ss_pred             HHhhCCCCCCE-EEEecchhHHHHHHHHHHHHhcCceEEEcc--cHHHHHHHHHhCCcEEEe
Confidence            35677889977 555556677888888999999988877733  567788889999876653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.94  E-value=0.86  Score=34.49  Aligned_cols=33  Identities=30%  Similarity=0.310  Sum_probs=27.6

Q ss_pred             CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      .|+..+|+.+++--|+++|......|.++++.-
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~   34 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVD   34 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            357889999999999999999999999866654

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.90  E-value=0.43  Score=34.22  Aligned_cols=59  Identities=20%  Similarity=0.270  Sum_probs=47.0

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+.+.+++|.+ |+..+.|-.|.....+|+.+|..-++.+.  .+..|++..+.+||+.+.-
T Consensus        22 ~~~~~~~~g~t-VlI~G~GgvGl~ai~~ak~~G~~~Vi~vd--~~~~kl~~Ak~~GA~~~in   80 (176)
T d1d1ta2          22 VKTGKVKPGST-CVVFGLGGVGLSVIMGCKSAGASRIIGID--LNKDKFEKAMAVGATECIS   80 (176)
T ss_dssp             HTTSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHHTCSEEEC
T ss_pred             HHhhCCCCCCE-EEEECCCchhHHHHHHHHHcCCceEEEec--CcHHHHHHHHhcCCcEEEC
Confidence            45566888876 66678899999999999999987777663  4577889999999987664

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.90  E-value=0.79  Score=34.82  Aligned_cols=74  Identities=16%  Similarity=0.140  Sum_probs=48.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++--|.++|......|.++++.-.... -....+.++..|.+++.+..+ .+.+++.+..++..++.
T Consensus        11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            477789999999999999999999998766543211 123345677788777665433 13445555555555554

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=90.85  E-value=1.4  Score=33.54  Aligned_cols=74  Identities=18%  Similarity=0.190  Sum_probs=50.2

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..||+.+++.-|.++|......|.++++.-....  .....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            367788888899999999999999998776654321  223456778889888766433 13445555555555554

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.72  E-value=1.5  Score=33.05  Aligned_cols=70  Identities=14%  Similarity=0.203  Sum_probs=45.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE--eCCCCChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL--TNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~--v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++.-|+++|......|.++++.-   .+..+++.+.....++..  +|-. +.++..+..++..++.
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~---r~~~~~~~~~~~~~~~~~~~~Dvs-~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICD---KDESGGRALEQELPGAVFILCDVT-QEDDVKTLVSETIRRF   77 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHHCTTEEEEECCTT-SHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHHhcCCCeEEEccCC-CHHHHHHHHHHHHHhc
Confidence            47789999999999999999999999866653   345555555444333333  3332 3455555555555544

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.69  E-value=1.1  Score=33.85  Aligned_cols=52  Identities=13%  Similarity=0.262  Sum_probs=33.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTN  123 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~  123 (221)
                      |+..||+.+++--|.++|......|.++++.-   .+..+++ ..+.+|.+.+.+.
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga~V~~~~---~~~~~~~~~~~~~~~~~~~~~   58 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSD---INEAAGQQLAAELGERSMFVR   58 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHHHCTTEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHHHhCCCeEEEE
Confidence            46778888888899999988888888755432   2333333 2344555555443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=90.61  E-value=1.6  Score=33.08  Aligned_cols=74  Identities=15%  Similarity=0.106  Sum_probs=49.3

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..||+.+++--|+++|......|.++++.-... .-....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         8 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999866654321 1123345667788877655432 23455555666665554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=90.57  E-value=0.83  Score=34.58  Aligned_cols=32  Identities=22%  Similarity=0.331  Sum_probs=26.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVM  100 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivv  100 (221)
                      |+..||+.+++--|+++|......|.++++.-
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~   37 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITG   37 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            46778888889999999988888898866554

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.49  E-value=0.75  Score=34.67  Aligned_cols=73  Identities=21%  Similarity=0.251  Sum_probs=50.0

Q ss_pred             CCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecC-----CCCHHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHH
Q 043209           66 ITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPA-----FMSLEKRIILQAYGAQLILTNAEM-GIDEEFRIVEEL  138 (221)
Q Consensus        66 ~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~-----~~~~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~  138 (221)
                      .+|+.+.+|+..+|--|.++|..-...|.+.++++..     +.....++.++..|++|..+..+- +.++..+...++
T Consensus         6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            5677788999999999999999988899876666532     223445677888999988765431 333433333333

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=90.10  E-value=0.83  Score=34.75  Aligned_cols=74  Identities=15%  Similarity=0.095  Sum_probs=52.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |++.+|+.+++.-|.++|......|.++++.-.... .....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           6 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            578899999999999999999999998777664321 133456788889888665332 23455666666666664

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=90.10  E-value=1.2  Score=33.73  Aligned_cols=74  Identities=16%  Similarity=0.191  Sum_probs=48.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..||+.+++.-|+++|......|.++++.-.... .....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            477899999999999999999999998665442211 122344567778877665432 13445555556655554

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.63  E-value=1.5  Score=32.98  Aligned_cols=73  Identities=14%  Similarity=0.172  Sum_probs=47.9

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      +..+|+.+++.-|+++|......|.++++.-... ......+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            3447888889999999999999999876654321 1122345567788887765432 23455666666666665

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.56  E-value=1.4  Score=33.46  Aligned_cols=73  Identities=16%  Similarity=0.012  Sum_probs=43.1

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNK  141 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~  141 (221)
                      |++.||+.+++.-|.++|......|.++++.-.... .....+.++..+.++..+..+ .+.++..+..++..++
T Consensus         8 gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           8 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            477788889999999999999889987666543211 122234455566666544322 1233344444444443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=89.42  E-value=0.97  Score=34.21  Aligned_cols=74  Identities=11%  Similarity=0.125  Sum_probs=51.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCC-CCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAF-MSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~-~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      ||..||+.+++.-|.++|......|.++++.-... .-....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY   77 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            46668999999999999999999999876654321 1123345677888888765433 24556666777777766

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=88.95  E-value=0.93  Score=34.32  Aligned_cols=75  Identities=19%  Similarity=0.229  Sum_probs=53.7

Q ss_pred             CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHcCCEEEEeCCCC-ChhHHHHHHHHHHhhC
Q 043209           68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS--LEKRIILQAYGAQLILTNAEM-GIDEEFRIVEELLNKI  142 (221)
Q Consensus        68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~--~~~~~~l~~~Ga~V~~v~~~~-~~~~~~~~a~~~~~~~  142 (221)
                      .|+..+|+.+++--|.++|......|.++++....+..  ....+.++.+|.+++.+..+- +.+++.+...+..++.
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            35777888888999999999999999998876644322  233567788999887765432 3556666666666665

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=88.86  E-value=2.5  Score=31.44  Aligned_cols=72  Identities=21%  Similarity=0.179  Sum_probs=47.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |++.||+.+++.-|.++|......|.++++.-..  .....+..+.+|.+++.+..+ .+.++..+..++..++.
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGASLVAVDRE--ERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4777999999999999999999999988765432  122334556678777655432 12344555555555443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=88.81  E-value=3  Score=31.28  Aligned_cols=44  Identities=14%  Similarity=0.172  Sum_probs=33.9

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIIL  112 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l  112 (221)
                      |+..+|+.+++--|.++|..-...|.+++++.........+..+
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~   48 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL   48 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHH
Confidence            47778888888899999999999999988887655445444443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.58  E-value=2.3  Score=32.83  Aligned_cols=74  Identities=14%  Similarity=0.148  Sum_probs=43.9

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHH-----HcCCEEEEeCCC-CChhHHHHHHHHHHhh
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQ-----AYGAQLILTNAE-MGIDEEFRIVEELLNK  141 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~-----~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~  141 (221)
                      |+..||+.+++.-|.++|......|.++++.-..... ....+.++     ..|.+++.+..+ .+.++..+..++..++
T Consensus        12 gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   91 (297)
T d1yxma1          12 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT   91 (297)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHH
Confidence            4778999999999999999999899986655432111 11223333     246666655432 1334445555554444


Q ss_pred             C
Q 043209          142 I  142 (221)
Q Consensus       142 ~  142 (221)
                      .
T Consensus        92 ~   92 (297)
T d1yxma1          92 F   92 (297)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=88.19  E-value=1.4  Score=33.72  Aligned_cols=73  Identities=19%  Similarity=0.209  Sum_probs=44.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCC---EEEE--eCCCCChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGA---QLIL--TNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga---~V~~--v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      |++.+|+.+++.-|+++|......|.++++.-.... .....+.++..|.   ++..  +|-. +.++..+...+..++.
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT-EASGQDDIINTTLAKF   82 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTT-SHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCC-CHHHHHHHHHHHHHHc
Confidence            477789988999999999999999998666542211 1122334555543   3443  3332 3445555555555554

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.98  E-value=1.3  Score=33.32  Aligned_cols=75  Identities=19%  Similarity=0.109  Sum_probs=51.4

Q ss_pred             CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS-LEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~-~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      .|+..+|+.+++--|.++|......|.++++.-..... ....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35788899999999999999999999987775543211 22345577888887654432 24556666666666665

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=87.87  E-value=0.92  Score=32.06  Aligned_cols=60  Identities=18%  Similarity=0.163  Sum_probs=44.8

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeC
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTN  123 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~  123 (221)
                      .+.+.++||.+ |+..+.|--|...+..++.+|...++++.  .+..|++..+.+|++-....
T Consensus        21 ~~~~~vk~Gdt-VlV~GaGG~G~~~~~~~~~~g~~~Vi~~~--~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2          21 VKVAKVTQGST-CAVFGLGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             HTTTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEECG
T ss_pred             HHhhCCCCCCE-EEEECCCCcHHHHHHHHHHcCCceEEeec--CcHHHHHHHHHhCCeeEEec
Confidence            45677889977 55556667888989999999987777773  35777888888998765543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=87.63  E-value=0.29  Score=30.58  Aligned_cols=49  Identities=12%  Similarity=0.031  Sum_probs=36.8

Q ss_pred             EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCC
Q 043209           72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAE  125 (221)
Q Consensus        72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~  125 (221)
                      +|..-++|..|+-++.+|+.+|++++++-|+...+...     .-.+++.++-+
T Consensus         3 ~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~-----~a~dvIT~e~E   51 (78)
T d3etja2           3 QVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP-----FQQSVITAEIE   51 (78)
T ss_dssp             EEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCGGGSC-----GGGSEEEESSS
T ss_pred             EEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCCcccc-----cccceEEEeec
Confidence            47788999999999999999999999999875433211     12367766544

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=87.36  E-value=1.1  Score=31.56  Aligned_cols=59  Identities=19%  Similarity=0.258  Sum_probs=41.5

Q ss_pred             HHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEe
Q 043209           61 EEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILT  122 (221)
Q Consensus        61 ~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v  122 (221)
                      .+.+.+++|.+ |+..+.|--+...+..++.++-..++.+.  ....|++..+.+||+-..-
T Consensus        21 ~~~a~~k~g~~-VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~--~~~~rl~~a~~~GAd~~in   79 (175)
T d1cdoa2          21 VNTAKVEPGST-CAVFGLGAVGLAAVMGCHSAGAKRIIAVD--LNPDKFEKAKVFGATDFVN   79 (175)
T ss_dssp             HTTTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCCEEEC
T ss_pred             HHhhCCCCCCE-EEEEecCCccchHHHHHHHHhhchheeec--chHHHHHHHHHcCCcEEEc
Confidence            35567888877 55555666777777777788876666663  3567888899999976653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=87.19  E-value=3  Score=31.21  Aligned_cols=71  Identities=25%  Similarity=0.266  Sum_probs=52.2

Q ss_pred             CCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209           68 PGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        68 ~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      .|+..+|+.+++.-|.++|......|.++++.-.+.   .+.+..+..+...+.+|-. +.++..+...+..++.
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~---~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP---EGKEVAEAIGGAFFQVDLE-DERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST---THHHHHHHHTCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHHHHhc
Confidence            357889999999999999999999999876554332   2345567788888888765 4566666676666664

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=86.67  E-value=1.7  Score=32.76  Aligned_cols=74  Identities=11%  Similarity=0.210  Sum_probs=51.2

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH--HHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEK--RIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~--~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |++.+|+.+++.-|.++|..-...|.++++.-.......+  .+..+.+|.++..+..+ .+.++..+..++..++.
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4677888999999999999999999987776654433322  23346678888765433 23456666667777765

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=86.24  E-value=1.9  Score=32.74  Aligned_cols=74  Identities=20%  Similarity=0.248  Sum_probs=52.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM--SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~--~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |++.+|+.+++.-|.++|......|.++++.-....  .....+.++..|.+++.+..+ .+.+++.+..++..++.
T Consensus        18 gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            477889999999999999999999999877654422  123455678889888765432 24556666666666554

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=85.40  E-value=6.5  Score=30.23  Aligned_cols=55  Identities=18%  Similarity=0.172  Sum_probs=40.3

Q ss_pred             CeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCC
Q 043209           70 KTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNA  124 (221)
Q Consensus        70 ~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~  124 (221)
                      ++.+|+.++|..|.+++......|.++++++.+..+..........|++++..+-
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~   58 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL   58 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCC
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeC
Confidence            5678888999999999999988999999998654343333333345777776554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=85.01  E-value=4  Score=30.57  Aligned_cols=71  Identities=23%  Similarity=0.222  Sum_probs=45.4

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKR-IILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~-~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |++.+|+.+++--|+++|......|.++++.-.   +..++ +..+.+|.++..+..+ .+.++..+..++..++.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r---~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGARVAIADI---NLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEES---CHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            467789999999999999999999988665532   33333 3345567777655432 13445555555555543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=84.15  E-value=5.1  Score=29.99  Aligned_cols=71  Identities=21%  Similarity=0.177  Sum_probs=44.5

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHH-HHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEK-RIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~-~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++--|+++|......|.++++.-.   +..+ .+..+.+|.++..+..+ .+.++..+..++..++.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r---~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            477789999999999999999999998655532   2333 33445566655544322 13445555555555544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.77  E-value=1.9  Score=32.48  Aligned_cols=74  Identities=12%  Similarity=0.093  Sum_probs=49.6

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCC-CHHHHHHHHHcCCEEEEeCCC-CChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFM-SLEKRIILQAYGAQLILTNAE-MGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~-~~~~~~~l~~~Ga~V~~v~~~-~~~~~~~~~a~~~~~~~  142 (221)
                      ++..+|+.+++--|+++|......|.++++.-.... -....+.++..|.++..+..+ .+.++..+...+..++.
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            467788888899999999988889998766543211 122345677888887765433 23455666666666665

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=83.73  E-value=5.3  Score=28.39  Aligned_cols=94  Identities=15%  Similarity=0.104  Sum_probs=55.1

Q ss_pred             eEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEEeCCCCChhHHHHHHHHHHhhCCCeeecCC
Q 043209           71 TVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLILTNAEMGIDEEFRIVEELLNKIPTSFNPHQ  150 (221)
Q Consensus        71 ~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~  150 (221)
                      +.|+.-++|..|.+.|..+++.|+++++|=.....-.++....       .++....+.+..+...+..++.+=.+.++.
T Consensus        44 k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~~GG~l~~~~-------~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~  116 (179)
T d1ps9a3          44 KNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------QIPGKEEFYETLRYYRRMIEVTGVTLKLNH  116 (179)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------TSTTCTTHHHHHHHHHHHHHHHTCEEEESC
T ss_pred             cEEEEECccHHHHHHHHHHHhhccceEEEeccCccCceEEEEE-------eCcccchHHHHHHHHHHhhhcCCeEEEeCC
Confidence            3499999999999999999999999999976543332222110       012222344444444444444422233322


Q ss_pred             CCCCccHHHHHhhHHHHHHHhhCCCCCEEEEccCchh
Q 043209          151 FKNPANPKTHYETTGPEIWEGTRGQVDIFVSGIGTGG  187 (221)
Q Consensus       151 ~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~p~G~Gg  187 (221)
                      .-+                .....++|+||+++|...
T Consensus       117 ~Vt----------------~~~~~~~d~vilAtG~~~  137 (179)
T d1ps9a3         117 TVT----------------ADQLQAFDETILASGIPN  137 (179)
T ss_dssp             CCC----------------SSSSCCSSEEEECCCEEC
T ss_pred             EEc----------------ccccccceeEEEeecCCC
Confidence            110                111246899999998754

>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: PK C-terminal domain-like
family: MTH1675-like
domain: Hypothetical protein MTH1675
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=83.64  E-value=2.3  Score=30.52  Aligned_cols=75  Identities=17%  Similarity=0.243  Sum_probs=51.8

Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEe-------cC--CCCHHHHHHHH
Q 043209           43 EPCSSVKDRIAFSMIKDAEEKGLITPGKTVLIECTSGNTGIGMACFAAAKGYKLILVM-------PA--FMSLEKRIILQ  113 (221)
Q Consensus        43 ~ptGs~K~R~a~~~~~~a~~~g~~~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivv-------p~--~~~~~~~~~l~  113 (221)
                      +|.-.+=+..+...+++|.+.|.    +..||.+++|.++..++-+   +.-+.++|-       |.  ..+++..+.|+
T Consensus        10 ~~G~~NT~~~l~~a~~ra~elgi----~~iVvAStsG~TA~~~~e~---~~~~lvvVth~~GF~~pg~~e~~~e~~~~L~   82 (186)
T d1t57a_          10 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEM---VEGNIVSVTHHAGFREKGQLELEDEARDALL   82 (186)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTT---CCSEEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CeEEEEeCCcHHHHHHHHh---cCCCEEEEecccCCCCCCCCccCHHHHHHHH
Confidence            34556677788888899999885    6656666679998665433   334554442       11  23678899999


Q ss_pred             HcCCEEEEeCC
Q 043209          114 AYGAQLILTNA  124 (221)
Q Consensus       114 ~~Ga~V~~v~~  124 (221)
                      ..|.+|+.-..
T Consensus        83 ~~G~~V~t~tH   93 (186)
T d1t57a_          83 ERGVNVYAGSH   93 (186)
T ss_dssp             HHTCEEECCSC
T ss_pred             HcCCEEEEecc
Confidence            99999987654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=83.53  E-value=3.1  Score=27.48  Aligned_cols=32  Identities=25%  Similarity=0.282  Sum_probs=29.1

Q ss_pred             EEEeeCCChHHHHHHHHHHHcCCeEEEEecCC
Q 043209           72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAF  103 (221)
Q Consensus        72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~  103 (221)
                      .++.-++|..|.-+|.+.+..|.+++++.+.+
T Consensus        32 ~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          32 RLLIVGGGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             eEEEECcchhHHHHHHHhhcccceEEEEeecc
Confidence            49999999999999999999999999998664

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=81.80  E-value=5  Score=29.72  Aligned_cols=70  Identities=20%  Similarity=0.153  Sum_probs=50.0

Q ss_pred             CCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCCEEEEeCCCCChhHHHHHHHHHHhhC
Q 043209           69 GKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRI-ILQAYGAQLILTNAEMGIDEEFRIVEELLNKI  142 (221)
Q Consensus        69 g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~-~l~~~Ga~V~~v~~~~~~~~~~~~a~~~~~~~  142 (221)
                      |+..+|+.+++--|.++|......|.++++.-.   +..+++ ..+.++++.+.+|-. +.++..+..++..++.
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r---~~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKEGARLVACDI---EEGPLREAAEAVGAHPVVMDVA-DPASVERGFAEALAHL   75 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTTCEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHhc
Confidence            467789999999999999999999998666542   344443 345678888887755 4566666666666654

>d1jx6a_ c.93.1.1 (A:) Quorum-sensing signal (autoinducer-2) binding protein LuxP {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Quorum-sensing signal (autoinducer-2) binding protein LuxP
species: Vibrio harveyi [TaxId: 669]

Probab=81.60  E-value=9.3  Score=29.12  Aligned_cols=34  Identities=18%  Similarity=0.214  Sum_probs=26.4

Q ss_pred             CCCCEEEEccCchhHHHHHHHHHHhcCC-CcEEEEEe
Q 043209          174 GQVDIFVSGIGTGGTVSGVGNFLKKKNP-EIKVYGVE  209 (221)
Q Consensus       174 ~~~d~vv~p~G~Gg~~~Gi~~~~~~~~~-~~kvigVe  209 (221)
                      +++|+||+.  +..++.|+..++++.++ ++.|+|++
T Consensus       230 ~~~~ai~~~--nd~~A~g~~~al~~~G~~~~~vig~D  264 (338)
T d1jx6a_         230 PDVDFIYAC--STDVALGAVDALAELGREDIMINGWG  264 (338)
T ss_dssp             CCCSEEEES--SHHHHHHHHHHHHHHTCTTSEEBCSB
T ss_pred             ccccccccc--cchhHhhhhhhhhhhhcccceeEEec
Confidence            568988875  45667889999999875 68888875

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=80.78  E-value=0.86  Score=32.23  Aligned_cols=30  Identities=23%  Similarity=0.365  Sum_probs=26.5

Q ss_pred             EEeeCCChHHHHHHHHHHHcCCe-EEEEecC
Q 043209           73 LIECTSGNTGIGMACFAAAKGYK-LILVMPA  102 (221)
Q Consensus        73 vv~assGN~~~alA~~a~~~g~~-~~ivvp~  102 (221)
                      |+.-++|+.|++.|..++++|++ +++|-..
T Consensus         7 VaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           7 IALLGAGPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             EEEECChHHHHHHHHHHHHCCCCeEEEEEec
Confidence            99999999999999999999995 7777543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=80.74  E-value=4  Score=26.42  Aligned_cols=50  Identities=20%  Similarity=0.166  Sum_probs=37.2

Q ss_pred             EEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCC---------HHHHHHHHHcCCEEEE
Q 043209           72 VLIECTSGNTGIGMACFAAAKGYKLILVMPAFMS---------LEKRIILQAYGAQLIL  121 (221)
Q Consensus        72 ~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~---------~~~~~~l~~~Ga~V~~  121 (221)
                      .++.-++|..|.-+|.+.+.+|.+++++-..+..         ..-.+.++..|.+++.
T Consensus        24 ~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~il~~~d~~~~~~l~~~l~~~GI~i~~   82 (117)
T d1ebda2          24 SLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVT   82 (117)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred             eEEEECCCccceeeeeeecccccEEEEEEecceecccccchhHHHHHHHHHhcCCEEEc
Confidence            4899999999999999999999999999755421         1123445666666553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=80.23  E-value=8.5  Score=27.82  Aligned_cols=67  Identities=22%  Similarity=0.254  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHH-cCCC-CCCCeEEEeeCCChHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEEE
Q 043209           51 RIAFSMIKDAEE-KGLI-TPGKTVLIECTSGNTGIGMACFAAAKGYKLILVMPAFMSLEKRIILQAYGAQLIL  121 (221)
Q Consensus        51 R~a~~~~~~a~~-~g~~-~~g~~~vv~assGN~~~alA~~a~~~g~~~~ivvp~~~~~~~~~~l~~~Ga~V~~  121 (221)
                      ++.++.+..+.+ .|.- -.|+ +|+.-+.||.|..+|......|.++++.-   ....++.....+|++++.
T Consensus         7 ~Gv~~~~~~~~~~~g~~~L~gk-~v~IqG~G~VG~~~A~~L~~~Gakvvv~d---~d~~~~~~~~~~g~~~~~   75 (201)
T d1c1da1           7 VGVFEAMKATVAHRGLGSLDGL-TVLVQGLGAVGGSLASLAAEAGAQLLVAD---TDTERVAHAVALGHTAVA   75 (201)
T ss_dssp             HHHHHHHHHHHHHTTCCCSTTC-EEEEECCSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCEECC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCC-EEEEECCCHHHHHHHHHHHHCCCEEEEec---chHHHHHHHHhhcccccC
Confidence            566666666543 3421 2344 48888999999999999999999876543   356677777778877653