Citrus Sinensis ID: 043227

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Protein Sequence
MVTTFRKLVSVLLILISLTLVTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEEccccccccEEEEEccccccccccccEEEEEEEccccccccccccEEEEEEEEEEEEccccccEEEEEEEEEEEcccccEEEEEEccccccccEEEEEEEEcccEEEEEEEEEEEEEEEEccccccEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHccccccccccccHcccccccccEEEEEEEEEcccccccEEEEEcccccccccccccEEEEEccccccccccccccccccEEEEEEccccccEEEEEEEEEEEcccccccEEEEEcccHHHHHcccccEEcccccEEEEEEEEEEEEEEEccccccEEEEEEEEEEEc
Coil and Loop (DISEMBL)
MVTTFRKLVSVLLILISLTLVTaksrhfsrtlspssqkLRKEKLSHLHFYfhdivsgknpTAVRVAQAAmtnhsptlFGVVVmiddpltmepepssklvgrAQGIYASASQNETGLLMAMNFSfmegkyngstlsvlgrnAVLStvrempivggsgLFRFARGYAqakthtfdpktgdAVVEYNVNVFHY
Flexible Loop (DISEMBL)
MVTTFRKLVSVLLILISLtlvtaksrhfsrtlspssqklRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAmtnhsptlFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKthtfdpktgdaVVEYNVNVFHY
Low Complexity Region (SEG)
MVTTFRKlvsvllilisltlvtAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY
Disordered region (IsUnstruct)
***TFRKLVSVLLILISLTLVTAKS******************LSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDP****************GIYASA*QNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVF**
Disordered Region (DISOPRED)
*****RKLVSVLLILISLTLVTAKSRHF***************LSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY
Disordered Region (DISEMBL)
MVTTFRKLVSVLLILISLTLVTAKS*************LRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY
Disordered Region (DISPRO)
*VTTFRKLVSVLLILISLTLVTAKSR********S*QKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVTTFRKLVSVLLILISLTLVTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	190	2.2.26 [Sep-21-2011]
P13240	184	Disease resistance respon	N/A	no	0.805	0.831	0.306	8e-13

>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2

 Score = 73.6 bits (179), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 23/176 (13%)

Query: 10  SVLLILISLTLVTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIV-SGKN--------- 59
           S LL+L    ++ A S     +  P+ +K  K    +L FYFHDI+ +GKN         
Sbjct: 3   SKLLVLFVFVMLFALS-----SAIPNKRKPYKP-CKNLVFYFHDILYNGKNAANATSAIV 56

Query: 60  --PTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLL 117
             P  V + + A  +H    FG +++ DDP+T+    SSK VGRAQG Y   ++N     
Sbjct: 57  AAPEGVSLTKLAPQSH----FGNIIVFDDPITLSHSLSSKQVGRAQGFYIYDTKNTYTSW 112

Query: 118 MAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFD 173
           ++  F      + G T++  G + +++  R++ + GG+G F   RG A   T  F+
Sbjct: 113 LSFTFVLNSTHHQG-TITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITTDAFE 167

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
118483793	194	unknown [Populus trichocarpa]	0.947	0.927	0.773	4e-75
224139916	178	predicted protein [Populus trichocarpa]	0.936	1.0	0.769	1e-74
225441531	192	PREDICTED: disease resistance response p	0.889	0.880	0.775	3e-73
225441529	192	PREDICTED: disease resistance response p	0.942	0.932	0.724	1e-72
224091581	182	predicted protein [Populus trichocarpa]	0.936	0.978	0.752	2e-72
356572136	191	PREDICTED: disease resistance response p	0.973	0.968	0.705	5e-71
255580704	196	Disease resistance response protein, put	1.0	0.969	0.683	7e-71
225441533	189	PREDICTED: disease resistance response p	0.873	0.878	0.757	1e-69
147835199	154	hypothetical protein VITISV_009422 [Viti	0.8	0.987	0.815	2e-69
147790587	153	hypothetical protein VITISV_000433 [Viti	0.8	0.993	0.809	1e-68

>gi|118483793|gb|ABK93789.1| unknown [Populus trichocarpa]

 Score =  286 bits (731), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 140/181 (77%), Positives = 155/181 (85%), Gaps = 1/181 (0%)

Query: 11  VLLILIS-LTLVTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAA 69
           VL I++S L +  AKS+ F++ LSP++  L+KEKLSHLHFYFHDIVSGKNPTAVR+A+A 
Sbjct: 14  VLSIVLSYLIIANAKSQRFTKYLSPATLGLKKEKLSHLHFYFHDIVSGKNPTAVRIARAD 73

Query: 70  MTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKY 129
           MTN S T FG+V MIDDPLTM PE SSKLVGRAQG YASASQN+ GLLM MNF FMEGK+
Sbjct: 74  MTNTSSTGFGMVAMIDDPLTMTPELSSKLVGRAQGFYASASQNDVGLLMTMNFVFMEGKF 133

Query: 130 NGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFH 189
           NGSTLSVLGRN+V STVREMPIVGGSGLFRFARGYAQA TH FD  TGDAVVEYNV VFH
Sbjct: 134 NGSTLSVLGRNSVFSTVREMPIVGGSGLFRFARGYAQASTHMFDRTTGDAVVEYNVYVFH 193

Query: 190 Y 190
           Y
Sbjct: 194 Y 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139916|ref|XP_002323339.1| predicted protein [Populus trichocarpa] gi|222867969|gb|EEF05100.1| predicted protein [Populus trichocarpa]

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/178 (76%), Positives = 152/178 (85%)

Query: 13  LILISLTLVTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTN 72
           ++L  L +  AKS+ F++ LSP++  L+KEKLSHLHFYFHDIVSGKNPTAVR+A+A MTN
Sbjct: 1   IVLSFLIIANAKSQRFTKYLSPATLGLKKEKLSHLHFYFHDIVSGKNPTAVRIARADMTN 60

Query: 73  HSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGS 132
            S T FG+V MIDDPLTM PE SSKLVGRAQG YASASQN+ GLLM MNF FMEGK+NGS
Sbjct: 61  TSSTGFGMVAMIDDPLTMTPELSSKLVGRAQGFYASASQNDVGLLMTMNFVFMEGKFNGS 120

Query: 133 TLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
           TLSVLGRN+V STVREMPIVGGSGLFRFARGYAQA TH FD  TGDAVVEYNV VFHY
Sbjct: 121 TLSVLGRNSVFSTVREMPIVGGSGLFRFARGYAQASTHMFDRTTGDAVVEYNVYVFHY 178

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441531|ref|XP_002280791.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera]

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 131/169 (77%), Positives = 146/169 (86%)

Query: 22  TAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVV 81
           + +S  FSR LSP S  L++EKLSHLHFYFHDI+SG  PTAVRVA+AAMTN S T+FG V
Sbjct: 24  SGESHRFSRNLSPESIGLKEEKLSHLHFYFHDIISGPKPTAVRVAEAAMTNKSATVFGAV 83

Query: 82  VMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNA 141
           +M+DDPLT+ PEPSSKLVGRAQGIYASASQ E G LM +NF+FMEGKYNGSTLSVLGRN 
Sbjct: 84  LMMDDPLTVGPEPSSKLVGRAQGIYASASQEEMGFLMVLNFAFMEGKYNGSTLSVLGRNT 143

Query: 142 VLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
           + S VREM IVGGSGLFRFARGYAQA+THTF+PKTGD VVEYNV VFHY
Sbjct: 144 IFSKVREMSIVGGSGLFRFARGYAQARTHTFNPKTGDVVVEYNVYVFHY 192

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441529|ref|XP_002280711.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera]

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 137/189 (72%), Positives = 152/189 (80%), Gaps = 10/189 (5%)

Query: 12  LLILISLTLVT----------AKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPT 61
           LLILI++   T           +S  FSR LSP S  L++EKLSHLHFYFHDI+S   PT
Sbjct: 4   LLILITIFFSTIAAVAASGSSEESHRFSRNLSPESMGLKEEKLSHLHFYFHDIISSPKPT 63

Query: 62  AVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMN 121
           AVRVA+AAMTN S T+FG V M+DD LT+ PEPSSKLVGRAQGIYASASQ E GLLM +N
Sbjct: 64  AVRVAEAAMTNKSATVFGAVFMMDDLLTVGPEPSSKLVGRAQGIYASASQEEMGLLMVLN 123

Query: 122 FSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVV 181
           F+FMEGKYNGSTLSVLGRN + S VREMPIVGGSGLFRFARGYAQA+THTF+ KTGDAVV
Sbjct: 124 FAFMEGKYNGSTLSVLGRNTIFSKVREMPIVGGSGLFRFARGYAQARTHTFNLKTGDAVV 183

Query: 182 EYNVNVFHY 190
           EYNV VFHY
Sbjct: 184 EYNVYVFHY 192

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091581|ref|XP_002309288.1| predicted protein [Populus trichocarpa] gi|222855264|gb|EEE92811.1| predicted protein [Populus trichocarpa]

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 134/178 (75%), Positives = 152/178 (85%)

Query: 13  LILISLTLVTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTN 72
           +IL SLTL  AK   FSR LSP +  L++EKLSHLHFYFHDIVSG NPTAV VA+AAMTN
Sbjct: 5   VILFSLTLAAAKPEGFSRNLSPKTLGLKREKLSHLHFYFHDIVSGSNPTAVPVARAAMTN 64

Query: 73  HSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGS 132
           +S + FG+V M+DDPLT++PE SSKLVGRAQGIYASASQ+E   LMA+NF F EGKYNGS
Sbjct: 65  NSFSSFGLVTMMDDPLTVKPEISSKLVGRAQGIYASASQSELSFLMALNFVFTEGKYNGS 124

Query: 133 TLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
           TLS+LGRN+VLS +REMP+VGGSGLFRFARGYAQAKTH  D KTGDA+VEYNV VFHY
Sbjct: 125 TLSILGRNSVLSGIREMPVVGGSGLFRFARGYAQAKTHDLDFKTGDAIVEYNVYVFHY 182

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572136|ref|XP_003554226.1| PREDICTED: disease resistance response protein 206-like [Glycine max]

 Score =  272 bits (695), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 132/187 (70%), Positives = 152/187 (81%), Gaps = 2/187 (1%)

Query: 6   RKLVSVLLILISL--TLVTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAV 63
           + L  +  I+++L  +  TAKS  F R++SP++  L+KEKLSHLHF+FHDI SG  PTAV
Sbjct: 5   KNLTYIFTIVLTLLFSFATAKSHSFHRSISPTALGLQKEKLSHLHFFFHDIGSGPKPTAV 64

Query: 64  RVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFS 123
           RVAQA MTN S   FG++VM DDPLT+ PEP SKLVG+AQGIY  ASQ + GLLM M+F+
Sbjct: 65  RVAQAHMTNTSSAFFGILVMADDPLTVGPEPGSKLVGKAQGIYGFASQEDVGLLMIMSFA 124

Query: 124 FMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEY 183
           F EGKYNGSTLS+LGRNAV STVREMPIVGGSG FRFARGYAQAKTHTFD KTGDAVVEY
Sbjct: 125 FTEGKYNGSTLSLLGRNAVFSTVREMPIVGGSGAFRFARGYAQAKTHTFDYKTGDAVVEY 184

Query: 184 NVNVFHY 190
           NV VFHY
Sbjct: 185 NVYVFHY 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580704|ref|XP_002531174.1| Disease resistance response protein, putative [Ricinus communis] gi|223529244|gb|EEF31217.1| Disease resistance response protein, putative [Ricinus communis]

 Score =  271 bits (694), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 134/196 (68%), Positives = 155/196 (79%), Gaps = 6/196 (3%)

Query: 1   MVTTFRKLVSVLLILISLTL------VTAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDI 54
           M  TF +L  + L+ +S+TL       TAKS  FSR LSP++  L++EKLSHLHFYFHDI
Sbjct: 1   MAKTFSRLPFIPLLFLSITLFFSNTLTTAKSNSFSRILSPATLGLKREKLSHLHFYFHDI 60

Query: 55  VSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNET 114
           VSG+N TAV VA A MTNHS + FG+V M+DDPLT EP  SSK+VGRAQGIYASASQ+E 
Sbjct: 61  VSGRNATAVPVASADMTNHSSSAFGLVNMMDDPLTAEPHLSSKIVGRAQGIYASASQSEL 120

Query: 115 GLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDP 174
             LM +NF+F +GKYNGS LSVLGRN+V S +REMPIVGGSGLFRFARGYAQAKTH  D 
Sbjct: 121 SFLMVLNFAFTQGKYNGSNLSVLGRNSVFSGIREMPIVGGSGLFRFARGYAQAKTHELDL 180

Query: 175 KTGDAVVEYNVNVFHY 190
           KTGDA+VEYNV VFHY
Sbjct: 181 KTGDAIVEYNVYVFHY 196

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441533|ref|XP_002280817.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera] gi|297739799|emb|CBI29981.3| unnamed protein product [Vitis vinifera]

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 128/169 (75%), Positives = 143/169 (84%), Gaps = 3/169 (1%)

Query: 22  TAKSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVV 81
           + +S  FSR LSP S  L++EKLSHLHFYFHDI+SG  PTAVRVA+AAMTN S T+FG V
Sbjct: 24  SGESHRFSRNLSPESMGLKEEKLSHLHFYFHDIISGPKPTAVRVAEAAMTNKSATMFGAV 83

Query: 82  VMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNA 141
           +M+DDPLT+ PEPSSKLVGRAQGIYASASQ E GLLM +NF+FMEGKYNGSTLSVLGRN 
Sbjct: 84  LMMDDPLTVGPEPSSKLVGRAQGIYASASQEEMGLLMVLNFAFMEGKYNGSTLSVLGRNT 143

Query: 142 VLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
           + S VREMPIVGGSGLFRFARGYAQA+T TF+    D VVEYNV VFHY
Sbjct: 144 IFSKVREMPIVGGSGLFRFARGYAQARTRTFNL---DVVVEYNVYVFHY 189

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147835199|emb|CAN76752.1| hypothetical protein VITISV_009422 [Vitis vinifera]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 124/152 (81%), Positives = 137/152 (90%)

Query: 39  LRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKL 98
           L++EKLSHLHFYFHDI+SG  PTAVRVA+AAMTN SPT+FG V+M+DDPLT+ PEPSSKL
Sbjct: 3   LKEEKLSHLHFYFHDIISGPKPTAVRVAEAAMTNKSPTVFGAVLMMDDPLTVGPEPSSKL 62

Query: 99  VGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLF 158
           VGRAQGIYASASQ E G LM +NF+FMEGKYNGSTLSVLGRN + S VREMPIVGGSGLF
Sbjct: 63  VGRAQGIYASASQEEIGFLMVLNFAFMEGKYNGSTLSVLGRNTIFSKVREMPIVGGSGLF 122

Query: 159 RFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
           RFARGYAQA+THTF+ KTGD VVEYNV VFHY
Sbjct: 123 RFARGYAQARTHTFNVKTGDVVVEYNVYVFHY 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147790587|emb|CAN76521.1| hypothetical protein VITISV_000433 [Vitis vinifera]

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 123/152 (80%), Positives = 136/152 (89%)

Query: 39  LRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKL 98
           L++EKLSHLHFYFHDI+SG  PTAVRVA+AAMTN S T+FG V+M+DDPLT+ PEPSSKL
Sbjct: 2   LKEEKLSHLHFYFHDIISGPKPTAVRVAEAAMTNKSATVFGAVLMMDDPLTVGPEPSSKL 61

Query: 99  VGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLF 158
           VGRAQGIYASASQ E G LM +NF+FMEGKYNGSTLSVLGRN + S VREM IVGGSGLF
Sbjct: 62  VGRAQGIYASASQEEMGFLMVLNFAFMEGKYNGSTLSVLGRNTIFSKVREMSIVGGSGLF 121

Query: 159 RFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
           RFARGYAQA+THTF+PKTGD VVEYNV VFHY
Sbjct: 122 RFARGYAQARTHTFNPKTGDVVVEYNVYVFHY 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
TAIR|locus:2047002	187	AT2G21100 "AT2G21100" [Arabido	0.784	0.796	0.604	9.8e-48
TAIR|locus:2009769	189	AT1G65870 "AT1G65870" [Arabido	0.873	0.878	0.578	1.1e-46
TAIR|locus:2196282	185	AT1G58170 "AT1G58170" [Arabido	0.842	0.864	0.562	1.6e-45
TAIR|locus:2154359	191	AT5G49040 "AT5G49040" [Arabido	0.857	0.853	0.542	5.6e-45
TAIR|locus:2091521	186	AT3G13650 "AT3G13650" [Arabido	0.863	0.881	0.544	5e-44
TAIR|locus:2035661	187	AT1G55210 "AT1G55210" [Arabido	0.842	0.855	0.554	1.2e-42
TAIR|locus:2162361	185	AT5G42500 "AT5G42500" [Arabido	0.847	0.870	0.538	1.5e-42
TAIR|locus:2017689	193	AT1G22900 "AT1G22900" [Arabido	0.852	0.839	0.536	3.6e-41
TAIR|locus:2162366	182	AT5G42510 "AT5G42510" [Arabido	0.815	0.851	0.537	9.6e-41
TAIR|locus:2091551	173	AT3G13662 "AT3G13662" [Arabido	0.710	0.780	0.536	4.3e-38

TAIR|locus:2047002 AT2G21100 "AT2G21100" [Arabidopsis thaliana (taxid:3702)]

 Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
 Identities = 90/149 (60%), Positives = 118/149 (79%)

Query:    41 KEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVG 100
             K+K+++L FYFHD +SGKNPTAV+VAQ   T  SPTLFG V M+DD LT   +P SKLVG
Sbjct:    39 KDKVTNLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALTETADPKSKLVG 98

Query:   101 RAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRF 160
             RAQG+Y S+ + E GL+MAM+F F +G Y  ST+S++G+N+ ++ +REMPIVGG+G+FR 
Sbjct:    99 RAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMFRM 158

Query:   161 ARGYAQAKTHTFDPKTGDAVVEYNVNVFH 189
             ARGYA A+T+ FDPKTGDA+V YNV + H
Sbjct:   159 ARGYAIARTNWFDPKTGDAIVGYNVTIMH 187

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2009769 AT1G65870 "AT1G65870" [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 96/166 (57%), Positives = 124/166 (74%)

Query:    24 KSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVM 83
             +S+ FS T+       + +KL+HLHFYFHDIVSG  PT+V+VA    TN S T FG+V +
Sbjct:    24 ESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSVQVANGPTTNSSATGFGLVAV 83

Query:    84 IDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVL 143
             +DD LT+ PE +S+ VGRAQG+YASA QN+ GLLMA N  F +GK++ ST+++ GRN VL
Sbjct:    84 VDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVL 143

Query:   144 STVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFH 189
             S VREMPI+GG+G FRF RGYA AKT  F+  +GDAVVEYNV ++H
Sbjct:   144 SKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2196282 AT1G58170 "AT1G58170" [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 90/160 (56%), Positives = 119/160 (74%)

Query:    31 TLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTM 90
             TL  +    +KEKL+H   Y+HDIV+G++ ++V +          T FG++ MID+PLT+
Sbjct:    26 TLESNFLHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTL 85

Query:    91 EPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMP 150
              P+ SSK+VGRAQG YA  S+ E GLLMAMNF+ ++GKYNGST++VLGRN+V   VREMP
Sbjct:    86 TPKLSSKMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMP 145

Query:   151 IVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
             ++GGSGLFRFARGY QA TH F+ KTG+A+VEYN  + HY
Sbjct:   146 VIGGSGLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2154359 AT5G49040 "AT5G49040" [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 89/164 (54%), Positives = 121/164 (73%)

Query:    28 FSRTLSPSSQKL-RKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDD 86
             F+RT++     L +KEKL+HL  Y+HDIV+G+NP+++R+        S + FG + MID+
Sbjct:    28 FARTINRKHLGLGKKEKLTHLRVYWHDIVTGRNPSSIRIQGPVAKYSSSSYFGSITMIDN 87

Query:    87 PLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTV 146
              LT++   +S +VG+AQG+Y  A+Q E GLLMAMN +F  GKYNGST+++LGRN V+S V
Sbjct:    88 ALTLDVPINSTVVGQAQGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKV 147

Query:   147 REMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
             REMP+VGGSG+FRFARGY +A+T  FD KTGDA VE N  + HY
Sbjct:   148 REMPVVGGSGMFRFARGYVEARTKLFDMKTGDATVESNCYILHY 191

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2091521 AT3G13650 "AT3G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 91/167 (54%), Positives = 120/167 (71%)

Query:    24 KSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVM 83
             K  +F++T+      LRKEKL+H   Y+HDI+SG NP++V V    ++N S   FG V +
Sbjct:    23 KGENFAKTIDKKHFGLRKEKLTHFRVYWHDILSGSNPSSV-VINPPISNSS--FFGSVTV 79

Query:    84 IDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVL 143
             ID+ LT E   +S LVG+AQGIYA+  Q +   LM MNF+F  GKYNGS++++LGRNAVL
Sbjct:    80 IDNRLTTEVAVNSTLVGQAQGIYAATGQRDASALMVMNFAFKTGKYNGSSIAILGRNAVL 139

Query:   144 STVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
             + VREMP++GGSGLFRFARGY +A+T  FD K+GDA VEY+  V HY
Sbjct:   140 TKVREMPVIGGSGLFRFARGYVEARTMWFDQKSGDATVEYSCYVLHY 186

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

TAIR|locus:2035661 AT1G55210 "AT1G55210" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 91/164 (55%), Positives = 117/164 (71%)

Query:    28 FSRTLSPSSQKL-RKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDD 86
             F+RT+      L +KEKL+H   Y+HDI+SG NPT++ + Q  +TN S   FG + MID+
Sbjct:    27 FARTMDRKLLGLHKKEKLTHFKVYWHDILSGPNPTSIMI-QPPVTNSS--YFGAISMIDN 83

Query:    87 PLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTV 146
              LT +   +S ++G+AQG YA A+Q E G LMAMNF+F  GKYNGST+++LGRN  LS V
Sbjct:    84 ALTAKVPMNSTVLGQAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEV 143

Query:   147 REMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFHY 190
             REMPIVGGSGLFRFARGY +A+T   + K GDA VEY+  V HY
Sbjct:   144 REMPIVGGSGLFRFARGYVEARTKWINLKNGDATVEYSCYVLHY 187

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2162361 AT5G42500 "AT5G42500" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 90/167 (53%), Positives = 117/167 (70%)

Query:    24 KSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVM 83
             +S  +S T  P  Q  + +K +HLHFYFHD++SG  PTAV+VA+A  TN S   FGV+++
Sbjct:    24 ESEAYSTT-KPC-QGYKPDKFTHLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMI 81

Query:    84 IDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVL 143
              DDPLT  P+PSSK VGRAQG+YA  +       M  N +F  G++NGST+++ GRN + 
Sbjct:    82 ADDPLTEGPDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIF 141

Query:   144 STVREMPIVGGSGLFRFARGYAQAKTHTFDPKTG-DAVVEYNVNVFH 189
             S VREMPI+GG+G FRFARGYAQAKT+      G DAVVEYNV ++H
Sbjct:   142 SKVREMPIIGGTGAFRFARGYAQAKTYKV---VGLDAVVEYNVFIWH 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2017689 AT1G22900 "AT1G22900" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 89/166 (53%), Positives = 117/166 (70%)

Query:    24 KSRHFSRTLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVM 83
             +S+ +S+T +P  Q  + +KL+HLHFYFHDI+SG  PT +RVA+A  TN S T+FG V++
Sbjct:    32 QSKPYSKT-TPF-QGNKPDKLTHLHFYFHDIISGDKPTTIRVAEAPGTNSSATVFGAVLI 89

Query:    84 IDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVL 143
             +D P+T  PE SSK VGRAQG+YAS      G  M  NF F EG++NGST ++ GRN +L
Sbjct:    90 VDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPIL 149

Query:   144 STVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFH 189
                RE+PI+GG+G FRFARGYA  KT+       DAVVEYNV ++H
Sbjct:   150 LEERELPIIGGTGDFRFARGYALPKTYKV--VNIDAVVEYNVFIWH 193

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2162366 AT5G42510 "AT5G42510" [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 86/160 (53%), Positives = 112/160 (70%)

Query:    31 TLSPSSQKLRKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTM 90
             T +P  Q  + EK +HLHFYFHD++SG  PTAV+VA+A  T      FGV+++ DDPLT 
Sbjct:    27 TTTPY-QGYKPEKFTHLHFYFHDVISGDKPTAVKVAEARPTTTLNVKFGVIMIADDPLTE 85

Query:    91 EPEPSSKLVGRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMP 150
              P+PSSK VGRAQG+YAS +  +    M  N+ F  G++NGST++V GRN + S VRE+P
Sbjct:    86 GPDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELP 145

Query:   151 IVGGSGLFRFARGYAQAKTHTFDPKTG-DAVVEYNVNVFH 189
             I+GG+G FRFARGYA  KT+      G DAVVEYNV ++H
Sbjct:   146 IIGGTGAFRFARGYALPKTYKI---VGLDAVVEYNVFIWH 182

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2091551 AT3G13662 "AT3G13662" [Arabidopsis thaliana (taxid:3702)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 74/138 (53%), Positives = 106/138 (76%)

Query:    40 RKEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLV 99
             +KEKL+HL  Y+H+ V+G+NP++V + Q  + +   +L G + M+DDPLT +   ++ +V
Sbjct:    38 KKEKLTHLRVYWHNSVNGRNPSSVMIQQPVLNS---SLSGSITMMDDPLTFDVPRNATVV 94

Query:   100 GRAQGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFR 159
             G+AQG+Y +A+Q E G LM MNF+F  GKYNGST+++LGRN V+S VREMP+VGGSG+FR
Sbjct:    95 GQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSGIFR 154

Query:   160 FARGYAQAKTHTFDPKTG 177
             FARGY +A+T +FD K G
Sbjct:   155 FARGYVEARTKSFDLKAG 172

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XVI.1936.1 SubName- Full=Putative uncharacterized protein; (178 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	190
pfam03018	144	pfam03018, Dirigent, Dirigent-like protein	1e-75

>gnl|CDD|217321 pfam03018, Dirigent, Dirigent-like protein

 Score =  223 bits (570), Expect = 1e-75
 Identities = 89/147 (60%), Positives = 106/147 (72%), Gaps = 3/147 (2%)

Query: 43  KLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRA 102
           KL+HLHFY HDIV+G N TAV+VA    TN S   FG VV+IDDPLT  P+ +SKLVGRA
Sbjct: 1   KLTHLHFYMHDIVTGPNATAVQVASPPGTNSSG--FGTVVVIDDPLTEGPDLNSKLVGRA 58

Query: 103 QGIYASASQNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFAR 162
           QG Y  ASQ+   LLMA  F F  G+YNGSTL+V+GRN V   VRE+ +VGG+G FR AR
Sbjct: 59  QGFYVYASQDGLSLLMAFTFVFTSGEYNGSTLAVMGRNPVFEEVRELSVVGGTGKFRMAR 118

Query: 163 GYAQAKTHTFDPKTGDAVVEYNVNVFH 189
           GYA A+T+ F   +GDA+VE NV V H
Sbjct: 119 GYALARTY-FSLTSGDAIVELNVYVKH 144

This family contains a number of proteins which are induced during disease response in plants. Members of this family are involved in lignification. Length = 144

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	190
PF03018	144	Dirigent: Dirigent-like protein; InterPro: IPR0042	100.0
PF06351	176	Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR	97.79
PLN02343	229	allene oxide cyclase	97.05

>PF03018 Dirigent: Dirigent-like protein; InterPro: IPR004265 This family contains a number of proteins which are induced during disease response in plants

Probab=100.00  E-value=5.5e-53  Score=336.59  Aligned_cols=144  Identities=56%  Similarity=0.943  Sum_probs=135.8

Q ss_pred             ceeEEEEEeeeecCCCCcceEEeeccccCCCCCCcceeEEEEeeccccCCCCCCcceeeEEEEEEeecCCcceEEEEEEE
Q 043227           43 KLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQNETGLLMAMNF  122 (190)
Q Consensus        43 k~t~l~fY~Hd~~sg~n~t~~~v~~~~~~~~s~~~FG~~~v~Dd~lt~gp~~~S~~VGrAQG~~~~~~~~~~~~~~~~~~  122 (190)
                      |++||+|||||+++|||+|++.|++++..+.  .+||+++|+||||||||+++||+||||||+|+.+++++.+|++++++
T Consensus         1 ~~t~l~fY~H~~~~g~n~t~~~v~~~~~~~~--~~FG~~~V~D~~lt~gp~~~S~~VGraqG~~~~~s~~~~~~~~~~~~   78 (144)
T PF03018_consen    1 KETHLHFYMHDIVSGPNPTAVVVAEPPGPSS--SGFGTVVVFDDPLTEGPDPDSKLVGRAQGFYVSASLDGSSWFMSFTL   78 (144)
T ss_pred             CceEEEEEeeecCCCCCCCEEEeccCCCCCC--CCCcEEEEEeeceEcCCCCCCccceEEEEEEEeecccCccEEEEEEE
Confidence            6899999999999999999999998775433  39999999999999999999999999999999999999999999999


Q ss_pred             EeecCcccCceEEEEccccccCcceeEEEeeccccccceeEEEEEEEEeeCCCCCCeEEEEEEEEEe
Q 043227          123 SFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVFH  189 (190)
Q Consensus       123 vF~~g~~~GSTl~v~G~~~~~~~~rE~aVVGGTG~Fr~ArG~a~~~t~~~~~~~~~~i~e~~V~v~h  189 (190)
                      +|++++||||||+++|+++..+++||||||||||+||||||||+++++ .+..+.++|+|||||++|
T Consensus        79 vF~~g~~~GStl~v~G~~~~~~~~~e~~VVGGTG~Fr~ArG~~~~~~~-~~~~~~~~v~e~~v~~~h  144 (144)
T PF03018_consen   79 VFEDGEYNGSTLSVMGRDPFFEPVRELAVVGGTGEFRMARGYAKLRTV-FDSSGGNAVLELNVHLFH  144 (144)
T ss_pred             EEEecccCCCeEEEeCCCcccCcccEEeEecCCCeEcceEEEEEEEEE-eecCCCCEEEEEEEEEEC
Confidence            999999999999999999999999999999999999999999999999 344678999999999998

>PF06351 Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR009410 This family consists of several plant specific allene oxide cyclase proteins (5

Probab=97.79  E-value=0.0016  Score=53.18  Aligned_cols=120  Identities=22%  Similarity=0.306  Sum_probs=74.3

Q ss_pred             cCceeEEEEEeeeecCCCCcceEEeeccccCCCCCCcceeEEEEeeccccCCCCCCcceeeEEEEEEeecC----CcceE
Q 043227           41 KEKLSHLHFYFHDIVSGKNPTAVRVAQAAMTNHSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQ----NETGL  116 (190)
Q Consensus        41 ~~k~t~l~fY~Hd~~sg~n~t~~~v~~~~~~~~s~~~FG~~~v~Dd~lt~gp~~~S~~VGrAQG~~~~~~~----~~~~~  116 (190)
                      +.|...|++|=-+...-.-|.-.++-     .++....|..+-|.|+|++|.-  -+.+|--+|+-+.-..    .+..+
T Consensus         4 p~kvqel~vyeiNErdR~SPa~L~ls-----~k~~nslGDlvpFsNklY~g~l--~~rlGitaG~Cvliq~~p~k~Gdry   76 (176)
T PF06351_consen    4 PTKVQELSVYEINERDRGSPAYLRLS-----QKSVNSLGDLVPFSNKLYDGDL--QKRLGITAGICVLIQHVPEKKGDRY   76 (176)
T ss_dssp             ----EEEEEEEE--S-S--S--B--S-----SSSSS-TT-EEEEEEEEEETTS--S-EEEEEEEEEEEEEEECCCTEEEE
T ss_pred             ccceEEEEEEEEcccccCCCcEEEcc-----cccchhcccccccccccccchh--hhhhcccceEEEEEEeccccCCceE
Confidence            45666777775443321122222321     2334679999999999999987  6899999999765442    33344


Q ss_pred             EEEEEEEeecCcccCceEEEEccccccCcceeEEEeeccccccceeEEEEEEEEee
Q 043227          117 LMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPIVGGSGLFRFARGYAQAKTHTF  172 (190)
Q Consensus       117 ~~~~~~vF~~g~~~GSTl~v~G~~~~~~~~rE~aVVGGTG~Fr~ArG~a~~~t~~~  172 (190)
                      =-.+++.|-  +| | .|+++|..... +..-++|.||||-|+.|+|-++++..-+
T Consensus        77 EaiySfyfG--dy-G-hISvqGpy~t~-eDtyLAVTGGtGiF~g~~GqVkL~qivf  127 (176)
T PF06351_consen   77 EAIYSFYFG--DY-G-HISVQGPYLTY-EDTYLAVTGGTGIFEGVYGQVKLHQIVF  127 (176)
T ss_dssp             EEEEEEE-G--GG-E-EEEEEEEEETT-S-EEEEEEEEEETTTT-EEEEEEEEEET
T ss_pred             EEEEEEEec--cc-c-eEEEecccccc-cceeEEEeccCceeecceEEEEEEEeec
Confidence            446667773  33 4 79999987654 4568999999999999999999987754

3.99.6 from EC). The allene oxide cyclase (AOC)-catalysed step in jasmonate (JA) biosynthesis is important in the wound response of tomato [].; GO: 0016853 isomerase activity, 0009507 chloroplast; PDB: 2GIN_A 2DIO_B 2BRJ_B 2Q4I_B 1Z8K_A 1ZVC_A.

>PLN02343 allene oxide cyclase

Probab=97.05  E-value=0.034  Score=47.15  Aligned_cols=90  Identities=24%  Similarity=0.338  Sum_probs=70.7

Q ss_pred             CcceeEEEEeeccccCCCCCCcceeeEEEEEEeecC----CcceEEEEEEEEeecCcccCceEEEEccccccCcceeEEE
Q 043227           76 TLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQ----NETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPI  151 (190)
Q Consensus        76 ~~FG~~~v~Dd~lt~gp~~~S~~VGrAQG~~~~~~~----~~~~~~~~~~~vF~~g~~~GSTl~v~G~~~~~~~~rE~aV  151 (190)
                      ...|.++-|.+.|+.|.-  -|.+|--.|+-+.-..    .+..+=-++++.|-  +| | .|++||....-+ ..-++|
T Consensus        85 ~sLGDlVPFsNKlY~g~L--~kRlGiTaG~Cvliq~~pek~gDryEa~ySfyfG--Dy-G-HisvqGpyltye-Dt~Lai  157 (229)
T PLN02343         85 NALGDLVPFTNKLYTGDL--KKRLGITAGLCVLIQHVPEKKGDRYEAIYSFYFG--DY-G-HISVQGPYLTYE-DTYLAI  157 (229)
T ss_pred             ccccceeccccccccchh--hhhhcccceeEEEEEeccccCCceeEEEEEEEec--Cc-c-eeEEeccccccc-cceEEe
Confidence            568999999999999865  5789999999665543    34455567778884  34 4 699999876544 468999


Q ss_pred             eeccccccceeEEEEEEEEee
Q 043227          152 VGGSGLFRFARGYAQAKTHTF  172 (190)
Q Consensus       152 VGGTG~Fr~ArG~a~~~t~~~  172 (190)
                      .||+|-|+.|+|-+++..+-+
T Consensus       158 TGGsGiFega~GqvkL~qivf  178 (229)
T PLN02343        158 TGGSGIFEGAYGQVKLHQIVF  178 (229)
T ss_pred             ecCcceeecceeEEEEeeeee
Confidence            999999999999999877654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	190
2brj_A	188	Arabidopsis thaliana genomic DNA, chromosome 3, TA	98.7
4h6b_A	195	Allene oxide cyclase; B-barrel, oxylipins, fatty a	98.4

>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A

Probab=98.70  E-value=6.5e-07  Score=72.62  Aligned_cols=102  Identities=22%  Similarity=0.259  Sum_probs=79.5

Q ss_pred             CCcceeEEEEeeccccCCCCCCcceeeEEEEEEeec----CCcceEEEEEEEEeecCcccCceEEEEccccccCcceeEE
Q 043227           75 PTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASAS----QNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMP  150 (190)
Q Consensus        75 ~~~FG~~~v~Dd~lt~gp~~~S~~VGrAQG~~~~~~----~~~~~~~~~~~~vF~~g~~~GSTl~v~G~~~~~~~~rE~a  150 (190)
                      ....|..+.|+++|.+|..  -+.||.-+|+-+...    ..+..+--.+++.|-+.   | .|+++|..... +...+|
T Consensus        42 ~~slGDlvpFsNkLydg~l--~~rvG~taG~Cv~~~~~p~~~gdryE~tyS~yfgd~---G-hISvQGpy~t~-~Dt~LA  114 (188)
T 2brj_A           42 MFGLGDLVPFTNKLYTGDL--KKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDY---G-HLSVQGPYLTY-EDSFLA  114 (188)
T ss_dssp             SSCTTCEEEECCEEEETTS--SCEEEEEEEEEEEEEEEGGGTEEEEEEEEEEECGGG---E-EEEEEEEEETT-BCEEEE
T ss_pred             CcCcccEEeeccccccccc--ceeccccceEEEEEEecCCCCCcEEEEEEEEEeCCC---c-eEEEecccccc-ccceee
Confidence            4568999999999997765  689999999977665    33455666777778442   4 79999986333 446899


Q ss_pred             EeeccccccceeEEEEEEEEeeCCCCCCeEEEEEEEEE
Q 043227          151 IVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNVF  188 (190)
Q Consensus       151 VVGGTG~Fr~ArG~a~~~t~~~~~~~~~~i~e~~V~v~  188 (190)
                      |.||||.|+.|+|.+++++..+.     ..++|.+|+.
T Consensus       115 ITGGTGif~gA~G~Vkl~~i~~P-----~k~~yTf~L~  147 (188)
T 2brj_A          115 ITGGAGIFEGAYGQVKLQQLVYP-----TKLFYTFYLK  147 (188)
T ss_dssp             EEEEEETTTTCEEEEEEEEEETT-----TEEEEEEEEE
T ss_pred             EecCcceEcceEEEEEEEeeccC-----ceEEEEEEEe
Confidence            99999999999999999998752     2578888874

>4h6b_A Allene oxide cyclase; B-barrel, oxylipins, fatty acid, metabolites, allene-oxide C activity, isomerase; HET: 10X 10Y; 1.35A {Physcomitrella patens} PDB: 4h6c_A 4h6a_A* 4h69_A*

Probab=98.40  E-value=1.7e-05  Score=64.57  Aligned_cols=100  Identities=22%  Similarity=0.282  Sum_probs=75.4

Q ss_pred             CcceeEEEEeeccccCCCCCCcceeeEEEEEEeec----CCcceEEEEEEEEeecCcccCceEEEEccccccCcceeEEE
Q 043227           76 TLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASAS----QNETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVREMPI  151 (190)
Q Consensus        76 ~~FG~~~v~Dd~lt~gp~~~S~~VGrAQG~~~~~~----~~~~~~~~~~~~vF~~g~~~GSTl~v~G~~~~~~~~rE~aV  151 (190)
                      ...|.++.|.++|.+|..  -+.||...|+-+...    ..+...--.+++.|.+   .| +|+++|..-.- ...-++|
T Consensus        51 ~slGDLvpFsnkLydg~l--~~RiGitaG~Cv~i~~~~~k~GdryEci~Tf~fGD---~G-hIsvqGpy~t~-eDs~lAI  123 (195)
T 4h6b_A           51 NSLGDLVPFSNKIYDGSL--KTRLGITAGLCTLISHSDQKNGDRYEALYSFYFGD---YG-HISVQGPYITY-EDSYLAI  123 (195)
T ss_dssp             CCTTCEEEECCEEEETTS--CCEEEEEEEEEEEEEEETTTTEEEEEEEEEEECGG---GC-EEEEEEEEETT-BCEEEEE
T ss_pred             cccccccccccccccccc--cccccccccEEEEEeecCCCCCceEEEEEEEEecC---Cc-eEEEecceecc-CceeEEE
Confidence            469999999999999987  689999999976653    2233444566777754   36 69999987443 4467999


Q ss_pred             eeccccccceeEEEEEEEEeeCCCCCCeEEEEEEEE
Q 043227          152 VGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNV  187 (190)
Q Consensus       152 VGGTG~Fr~ArG~a~~~t~~~~~~~~~~i~e~~V~v  187 (190)
                      +||||.|+.|+|-+++..+-+-     ..+-|..|+
T Consensus       124 TGGTGiF~Ga~GqVkl~qiv~p-----fklfytfyl  154 (195)
T 4h6b_A          124 TGGSGIFAGCYGQAKLHQIIFP-----FKLFYTFYL  154 (195)
T ss_dssp             EEESGGGTTCEEEEEEEEEETT-----TEEEEEEEE
T ss_pred             ecCcceEcccEEEEEEeEeeee-----eeEEEEEEe
Confidence            9999999999999999777642     234555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	190
d2brja1	174	Allene oxide cyclase, AOC {Thale cress (Arabidopsi	97.58

>d2brja1 b.159.1.1 (A:15-188) Allene oxide cyclase, AOC {Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]}

class: All beta proteins
fold: AOC barrel-like
superfamily: Allene oxide cyclase-like
family: Allene oxide cyclase-like
domain: Allene oxide cyclase, AOC
species: Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]

Probab=97.58  E-value=0.0017  Score=49.86  Aligned_cols=103  Identities=22%  Similarity=0.307  Sum_probs=77.1

Q ss_pred             CCCCcceeEEEEeeccccCCCCCCcceeeEEEEEEeecC----CcceEEEEEEEEeecCcccCceEEEEccccccCccee
Q 043227           73 HSPTLFGVVVMIDDPLTMEPEPSSKLVGRAQGIYASASQ----NETGLLMAMNFSFMEGKYNGSTLSVLGRNAVLSTVRE  148 (190)
Q Consensus        73 ~s~~~FG~~~v~Dd~lt~gp~~~S~~VGrAQG~~~~~~~----~~~~~~~~~~~vF~~g~~~GSTl~v~G~~~~~~~~rE  148 (190)
                      +.....|..+-|-|.|..|..  -|.+|--.|+-+.-..    .+..+--++++.|-+  | | .|++||.....+. .-
T Consensus        26 ~~~n~lGDlVpFsNkly~g~l--~kRlGitaG~C~liq~~pek~gdryEa~ySfyfGD--y-G-hISvqGpyltyeD-ty   98 (174)
T d2brja1          26 SLMFGLGDLVPFTNKLYTGDL--KKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGD--Y-G-HLSVQGPYLTYED-SF   98 (174)
T ss_dssp             SSSSCTTCEEEECCEEEETTS--SCEEEEEEEEEEEEEEEGGGTEEEEEEEEEEECGG--G-E-EEEEEEEEETTBC-EE
T ss_pred             cccccccccccccchhcccch--hhhccceeeEEEEEEecCCcCcceeEEEEEEEecC--c-c-cEEEecccccccc-ce
Confidence            344679999999999997654  6889999999665542    334455577777854  4 4 7999998876544 68


Q ss_pred             EEEeeccccccceeEEEEEEEEeeCCCCCCeEEEEEEEE
Q 043227          149 MPIVGGSGLFRFARGYAQAKTHTFDPKTGDAVVEYNVNV  187 (190)
Q Consensus       149 ~aVVGGTG~Fr~ArG~a~~~t~~~~~~~~~~i~e~~V~v  187 (190)
                      ++|+||||-|+.|+|-+++..+-+-     ..+-|..|+
T Consensus        99 laiTGGsGiFeGa~GqVkL~qivfP-----fKlfYTFyL  132 (174)
T d2brja1          99 LAITGGAGIFEGAYGQVKLQQLVYP-----TKLFYTFYL  132 (174)
T ss_dssp             EEEEEEEETTTTCEEEEEEEEEETT-----TEEEEEEEE
T ss_pred             eeeecccceeecceeEEEEeeeeee-----eeEEEEEEE
Confidence            9999999999999999999877642     134555554