Citrus Sinensis ID: 043286

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MARPQHHFQQNYQQPQQQSKSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKMYIRE
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHccccccccccccccEccccccccccEcccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHcHHHHHcccccHHHHHccccccccccccHHHHcccc
Coil and Loop (DISEMBL)
marpqhhfqqnyqqpqqqsKSFRNLyamdgqisppvayyssannlqdqsqhppyippfhvvgfapgpvnatdgsdggadlqwnsglepkrkrlkeqdflennsqissvdflqarpvstglglsldntrmaSSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYaqsrdskegcgdsevddtasccngraiDFHILCKENNDMKELMTCKMYIRE
Flexible Loop (DISEMBL)
marpqhhfqqnyqqpqqQSKSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLennsqissvdflqarPVSTGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEkvqanqlqtislVEDKVIEKlrekeaeveninkrnlelEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILckenndmkelMTCKMYIRE
Low Complexity Region (SEG)
MArpqhhfqqnyqqpqqqsksfrnLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKMYIRE
Disordered region (IsUnstruct)
*************************************Y***************YIPPFHVVGFAP***********************************************************************LLSFIGDDI*********EIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVI******************************************NMINALKVNLQHVYA***************DTASCCNGRAIDFHILCKENNDMKELMTCKMY***
Disordered Region (DISOPRED)
********************************************************PFHVVGFAPGPVN***************************************************************************IDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVN*********************DTASCCNGRA************MKELMTCKMYIR*
Disordered Region (DISEMBL)
*******************KSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVY****************DTASCCNGRAIDFHILCKENNDMKELMTCKMYIRE
Disordered Region (DISPRO)
*****HH*********Q*SKSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNAT*GSDGGADLQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQA*PVST***************DSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDS*********************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MARPQHHFQQNYQQPQQQSKSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKMYIRE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
224098324	337	predicted protein [Populus trichocarpa]	0.909	0.804	0.828	1e-131
224137558	337	predicted protein [Populus trichocarpa]	0.909	0.804	0.824	1e-131
118482316	337	unknown [Populus trichocarpa]	0.909	0.804	0.821	1e-130
358248862	351	uncharacterized protein LOC100783373 [Gl	0.979	0.831	0.742	1e-128
356564178	342	PREDICTED: uncharacterized protein LOC10	0.916	0.798	0.782	1e-125
255538268	336	ATP binding protein, putative [Ricinus c	0.906	0.803	0.816	1e-124
357437787	340	Baculoviral IAP repeat-containing protei	0.979	0.858	0.746	1e-124
302142301	330	unnamed protein product [Vitis vinifera]	0.959	0.866	0.758	1e-123
187942401	335	SBP1 [Nicotiana alata]	0.966	0.859	0.744	1e-121
82470795	335	S-RNase-binding protein [Petunia integri	0.966	0.859	0.744	1e-121

>gi|224098324|ref|XP_002334565.1| predicted protein [Populus trichocarpa] gi|222872651|gb|EEF09782.1| predicted protein [Populus trichocarpa]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/274 (82%), Positives = 254/274 (92%), Gaps = 3/274 (1%)

Query: 20  KSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGAD 79
           K+ RNLYA+D QISP VAY++ +N LQDQSQHPPY+PPFHVVGFAPGP N  DGSDGG +
Sbjct: 22  KNLRNLYAIDSQISPAVAYFNPSN-LQDQSQHPPYVPPFHVVGFAPGPGN--DGSDGGLE 78

Query: 80  LQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLS 139
           LQWN GLEPKRKRLKEQDFLENNSQISSVDFLQAR VSTGLGLSLDNTR++SS DSALLS
Sbjct: 79  LQWNYGLEPKRKRLKEQDFLENNSQISSVDFLQARSVSTGLGLSLDNTRVSSSGDSALLS 138

Query: 140 FIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEA 199
            IGDDIDSELQRQD E+D+FLK+QGDRLRQ I EKVQA+QLQTISLVE+KV++KLR+KEA
Sbjct: 139 LIGDDIDSELQRQDVEVDKFLKIQGDRLRQTILEKVQADQLQTISLVEEKVLQKLRQKEA 198

Query: 200 EVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGD 259
           EVE+INK+NLELEE+MEQLS+EAGAWQ+RAR+NENMINA+K N+Q VYAQSRDSKEGCGD
Sbjct: 199 EVESINKKNLELEEKMEQLSMEAGAWQERARYNENMINAIKFNIQQVYAQSRDSKEGCGD 258

Query: 260 SEVDDTASCCNGRAIDFHILCKENNDMKELMTCK 293
           SEVDDTASCCNGRAIDFH+L  +NNDMKELMTCK
Sbjct: 259 SEVDDTASCCNGRAIDFHLLSNDNNDMKELMTCK 292

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137558|ref|XP_002327156.1| predicted protein [Populus trichocarpa] gi|222835471|gb|EEE73906.1| predicted protein [Populus trichocarpa]

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/274 (82%), Positives = 254/274 (92%), Gaps = 3/274 (1%)

Query: 20  KSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGAD 79
           K+ RNLYA+D QISP VAY++ +N LQDQSQHPPY+PPFHVVGFAPGP N  DGSDGG +
Sbjct: 22  KNLRNLYAIDSQISPAVAYFNPSN-LQDQSQHPPYVPPFHVVGFAPGPGN--DGSDGGLE 78

Query: 80  LQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLS 139
           LQWN GLEPKRKRLKEQDFLENNSQISSVDFLQAR VSTGLGLSLDNTR++SS DSALLS
Sbjct: 79  LQWNYGLEPKRKRLKEQDFLENNSQISSVDFLQARSVSTGLGLSLDNTRVSSSGDSALLS 138

Query: 140 FIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEA 199
            IGDDIDSELQRQD E+D+FLK+QGDRLRQ I EKVQA+QLQTISLVE+KV++KLR+KEA
Sbjct: 139 LIGDDIDSELQRQDVEVDKFLKIQGDRLRQTILEKVQADQLQTISLVEEKVLQKLRQKEA 198

Query: 200 EVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGD 259
           EVE+INK+N+ELEE+MEQLS+EAGAWQ+RAR+NENMINA+K N+Q VYAQSRDSKEGCGD
Sbjct: 199 EVESINKKNMELEEKMEQLSMEAGAWQERARYNENMINAIKFNIQQVYAQSRDSKEGCGD 258

Query: 260 SEVDDTASCCNGRAIDFHILCKENNDMKELMTCK 293
           SEVDDTASCCNGRAIDFH+L  +NNDMKELMTCK
Sbjct: 259 SEVDDTASCCNGRAIDFHLLSNDNNDMKELMTCK 292

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482316|gb|ABK93084.1| unknown [Populus trichocarpa]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 225/274 (82%), Positives = 253/274 (92%), Gaps = 3/274 (1%)

Query: 20  KSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGAD 79
           K+ RNLYA+D QISP VAY++ +N LQDQSQHPPY+PPFHV GFAPGP N  DGSDGG +
Sbjct: 22  KNLRNLYAIDSQISPAVAYFNPSN-LQDQSQHPPYVPPFHVEGFAPGPGN--DGSDGGLE 78

Query: 80  LQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLS 139
           LQWN GLEPKRKRLKEQDFLENNSQISSVDFLQAR VSTGLGLSLDNTR++SS DSALLS
Sbjct: 79  LQWNYGLEPKRKRLKEQDFLENNSQISSVDFLQARSVSTGLGLSLDNTRVSSSGDSALLS 138

Query: 140 FIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEA 199
            IGDDIDSELQRQD E+D+FLK+QGDRLRQ I EKVQA+QLQTISLVE+KV++KLR+KEA
Sbjct: 139 LIGDDIDSELQRQDVEVDKFLKIQGDRLRQTILEKVQADQLQTISLVEEKVLQKLRQKEA 198

Query: 200 EVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGD 259
           EVE+INK+N+ELEE+MEQLS+EAGAWQ+RAR+NENMINA+K N+Q VYAQSRDSKEGCGD
Sbjct: 199 EVESINKKNMELEEKMEQLSMEAGAWQERARYNENMINAIKFNIQQVYAQSRDSKEGCGD 258

Query: 260 SEVDDTASCCNGRAIDFHILCKENNDMKELMTCK 293
           SEVDDTASCCNGRAIDFH+L  +NNDMKELMTCK
Sbjct: 259 SEVDDTASCCNGRAIDFHLLSNDNNDMKELMTCK 292

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248862|ref|NP_001239697.1| uncharacterized protein LOC100783373 [Glycine max] gi|255637148|gb|ACU18905.1| unknown [Glycine max]

 Score =  462 bits (1189), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/307 (74%), Positives = 260/307 (84%), Gaps = 15/307 (4%)

Query: 1   MARPQHHFQQNYQQPQQQ------------SKSFRNLYAMDGQISPPVAYYSSANNLQDQ 48
           MA PQHHFQ++YQ  QQQ            +K+FRNL  +DGQ+S  VA+Y+   +LQ+Q
Sbjct: 1   MAFPQHHFQRHYQSQQQQQQQQQQQQQQPQTKNFRNLQTIDGQMSQQVAFYN-PTDLQEQ 59

Query: 49  SQHPPYIPPFHVVGFAPGPVNATDGSDGGADLQ--WNSGLEPKRKRLKEQDFLENNSQIS 106
           SQHPPYIPPFHVVGFAPGPV   DGSDGG DLQ  WN GLEP+RKRLKEQDFLENNSQIS
Sbjct: 60  SQHPPYIPPFHVVGFAPGPVPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQIS 119

Query: 107 SVDFLQARPVSTGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDR 166
           SVDFLQ R VSTGLGLSLDNT + S+ DSALLS IGDDI  ELQ+QD EIDRFLKVQG+R
Sbjct: 120 SVDFLQPRSVSTGLGLSLDNTHLTSTGDSALLSLIGDDIKCELQQQDVEIDRFLKVQGER 179

Query: 167 LRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQ 226
           LRQA+ EKVQA QLQ++SL+EDKV++KLREKEAEVE+INKRN+ELE+RMEQL+VEAG WQ
Sbjct: 180 LRQAVLEKVQATQLQSVSLIEDKVLQKLREKEAEVESINKRNMELEDRMEQLTVEAGTWQ 239

Query: 227 QRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDM 286
           QRAR+NENMI+ALK NLQ  Y QSRDSKEGCGDSEVDDTASCCNGR++DFH+L +EN DM
Sbjct: 240 QRARYNENMISALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRSLDFHLLSRENTDM 299

Query: 287 KELMTCK 293
           KE+MTCK
Sbjct: 300 KEMMTCK 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564178|ref|XP_003550333.1| PREDICTED: uncharacterized protein LOC100811918 [Glycine max]

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/276 (78%), Positives = 245/276 (88%), Gaps = 3/276 (1%)

Query: 20  KSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGGAD 79
           KSFRNL  +DGQ+S  VA+Y+   +LQDQSQHPPYIPPFHVVGFAPGPV   DGSDGG D
Sbjct: 23  KSFRNLQTIDGQMSQQVAFYN-PTDLQDQSQHPPYIPPFHVVGFAPGPVPPADGSDGGVD 81

Query: 80  LQ--WNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSAL 137
           LQ  WN GLEP+RKRLKEQDFLENNSQISSVDFLQ R VSTGLGLSLDNTR+ S+ DSAL
Sbjct: 82  LQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSAL 141

Query: 138 LSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREK 197
           LS IGDDI+ ELQ+QDAEIDRFLKVQG RLRQA+ EKVQA QLQ++SL+EDK+++KLREK
Sbjct: 142 LSLIGDDIERELQQQDAEIDRFLKVQGGRLRQAVLEKVQATQLQSVSLIEDKILQKLREK 201

Query: 198 EAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGC 257
           EA VE+INKRN+ELE++MEQL+VEAG+WQQRAR+NENMI ALK NLQ  Y QSRDSKEGC
Sbjct: 202 EAMVESINKRNIELEDQMEQLTVEAGSWQQRARYNENMIAALKFNLQQAYVQSRDSKEGC 261

Query: 258 GDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCK 293
           GDSEVDDTASCCNGR++DFH+L +EN DMKE+MTCK
Sbjct: 262 GDSEVDDTASCCNGRSLDFHLLSRENTDMKEMMTCK 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538268|ref|XP_002510199.1| ATP binding protein, putative [Ricinus communis] gi|223550900|gb|EEF52386.1| ATP binding protein, putative [Ricinus communis]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/278 (81%), Positives = 251/278 (90%), Gaps = 8/278 (2%)

Query: 19  SKSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPP-FHVVGFAPGPVNATDGSDGG 77
           SK+ RNLY++DGQ+     YY+  N LQDQSQHPPYIPP FHVVGFAPGP    DGSDGG
Sbjct: 22  SKNLRNLYSIDGQV-----YYNPVN-LQDQSQHPPYIPPPFHVVGFAPGPATIADGSDGG 75

Query: 78  ADLQWNS-GLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSA 136
           ADL WN+ GLEPK+K+LKEQDFLENNSQISSVDFLQAR VSTGLGLSLDNTR++SS DSA
Sbjct: 76  ADLPWNNYGLEPKKKKLKEQDFLENNSQISSVDFLQARSVSTGLGLSLDNTRLSSSGDSA 135

Query: 137 LLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLRE 196
           L+S IGDDID ELQRQDAEIDRFLKVQGDRLRQ I EKVQANQLQ +SLVE+KV+EKLRE
Sbjct: 136 LISLIGDDIDRELQRQDAEIDRFLKVQGDRLRQTILEKVQANQLQALSLVEEKVLEKLRE 195

Query: 197 KEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEG 256
           KEAEVE+I+KRN+ELEE+MEQLSVEAGAWQQRAR+NE++INAL  NLQ VYAQS+DSKEG
Sbjct: 196 KEAEVESISKRNMELEEQMEQLSVEAGAWQQRARYNESVINALNFNLQQVYAQSKDSKEG 255

Query: 257 CGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKM 294
           CGDSEVDDTASCCNGRAIDFH+L KENNDMKELMTCK+
Sbjct: 256 CGDSEVDDTASCCNGRAIDFHLLSKENNDMKELMTCKV 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437787|ref|XP_003589169.1| Baculoviral IAP repeat-containing protein [Medicago truncatula] gi|355478217|gb|AES59420.1| Baculoviral IAP repeat-containing protein [Medicago truncatula] gi|388499058|gb|AFK37595.1| unknown [Medicago truncatula]

 Score =  449 bits (1155), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/296 (74%), Positives = 255/296 (86%), Gaps = 4/296 (1%)

Query: 1   MARPQHHFQQNYQQPQQQ---SKSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPP 57
           MA  Q  FQ++YQQ QQ    +KSFRNL  ++GQ+S  +A+Y+   +LQDQSQHPPYIPP
Sbjct: 1   MAFLQDQFQRHYQQQQQPQPQTKSFRNLQTIEGQMSQQMAFYN-PTDLQDQSQHPPYIPP 59

Query: 58  FHVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVS 117
           FHVVGFAPGPV   DGSDGG DL WN GLEP+RKRLKEQDFLENNSQISSVDFLQ R VS
Sbjct: 60  FHVVGFAPGPVIPADGSDGGVDLHWNFGLEPERKRLKEQDFLENNSQISSVDFLQPRSVS 119

Query: 118 TGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQA 177
           TGLGLSLDNTR+AS+ DSALLS IGDDID ELQ+QD E+DRFLK+QG++LRQ I EKVQA
Sbjct: 120 TGLGLSLDNTRLASTGDSALLSLIGDDIDRELQQQDLEMDRFLKLQGEQLRQTILEKVQA 179

Query: 178 NQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMIN 237
            QLQ++S++EDKV++KLREKE EVENINKRN+ELE++MEQLSVEAGAWQQRAR+NENMI 
Sbjct: 180 TQLQSVSIIEDKVLQKLREKETEVENINKRNMELEDQMEQLSVEAGAWQQRARYNENMIA 239

Query: 238 ALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCK 293
           ALK NLQ  Y Q RDSKEGCGDSEVDDTASCCNGR++DFH+L  EN++MK+LM CK
Sbjct: 240 ALKFNLQQAYLQGRDSKEGCGDSEVDDTASCCNGRSLDFHLLSNENSNMKDLMKCK 295

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142301|emb|CBI19504.3| unnamed protein product [Vitis vinifera]

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/294 (75%), Positives = 251/294 (85%), Gaps = 8/294 (2%)

Query: 1   MARPQHHFQQNYQQPQQQSKSFRNLYAMDGQISPPVAYYSSANNLQDQSQHPPYIPPFHV 60
           MA P H FQQ       +SK +RNLY  +GQIS   A+YS+ N  QDQS HPPYIPPFHV
Sbjct: 1   MAMPHHPFQQ-------ESKPYRNLYTNEGQISQQAAFYSTTN-FQDQSHHPPYIPPFHV 52

Query: 61  VGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENNSQISSVDFLQARPVSTGL 120
            GFAPGP  A DG DGG +L+WN GLE K+KRLKEQDFLEN+SQISSVDFLQ R VSTGL
Sbjct: 53  EGFAPGPFAAADGDDGGGELRWNYGLESKKKRLKEQDFLENHSQISSVDFLQPRSVSTGL 112

Query: 121 GLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQL 180
           GLSLD+ RMASS DSA +  IGDDID ELQRQDAEIDRFLKVQ DR+RQAI EKVQA+QL
Sbjct: 113 GLSLDHGRMASSGDSAFIHLIGDDIDLELQRQDAEIDRFLKVQSDRMRQAILEKVQASQL 172

Query: 181 QTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALK 240
           QT+SL+EDKV+ +LR+KE EVE+INK+N+ELEERMEQL+VEAGAWQQRA++NENMI ALK
Sbjct: 173 QTMSLLEDKVLRQLRDKEVEVESINKKNMELEERMEQLTVEAGAWQQRAKYNENMITALK 232

Query: 241 VNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKM 294
            +LQ VYAQSRDSKEGCGDSEVDDTASCCNGRAIDFH+LCKENNDM+ELMTCK+
Sbjct: 233 FSLQRVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHLLCKENNDMRELMTCKV 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|187942401|gb|ACD40009.1| SBP1 [Nicotiana alata]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/297 (74%), Positives = 255/297 (85%), Gaps = 9/297 (3%)

Query: 1   MARPQHHFQ-QNYQQPQQQSKSFRNLYA-MDGQISPPVAYYSSANNLQDQSQHPPYIPPF 58
           MA P HH Q  + QQ QQQS SFR++Y  MDGQIS PVAY++ +N L +QSQHPPYIP F
Sbjct: 1   MALPHHHLQLHSIQQQQQQSNSFRDIYNNMDGQISTPVAYFNGSN-LPEQSQHPPYIPAF 59

Query: 59  HVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENN-SQISSVDFLQARPVS 117
            VVG APGP +     +GG DLQWN GLEPK++RLKEQDFLENN SQISSVDFLQ R VS
Sbjct: 60  QVVGLAPGPAD-----EGGLDLQWNYGLEPKKRRLKEQDFLENNNSQISSVDFLQQRSVS 114

Query: 118 TGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQA 177
           TGLGLSLDN R+ S  DSA L  +GDDI+ ELQRQDA+IDR++KVQGDRLRQAI EKVQA
Sbjct: 115 TGLGLSLDNGRLGSCGDSAFLGLVGDDIERELQRQDADIDRYIKVQGDRLRQAILEKVQA 174

Query: 178 NQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMIN 237
           NQLQTI+ VE+KVI+KLREKEAEVE+INK+N+ELE RMEQL++EA AWQQRA++NEN+IN
Sbjct: 175 NQLQTITCVEEKVIQKLREKEAEVEDINKKNMELELRMEQLALEANAWQQRAKYNENLIN 234

Query: 238 ALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKM 294
            LKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRA DFH+LC+++N+MKELMTCK+
Sbjct: 235 TLKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRATDFHLLCRDSNEMKELMTCKV 291

Source: Nicotiana alata

Species: Nicotiana alata

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|82470795|gb|ABB77434.1| S-RNase-binding protein [Petunia integrifolia subsp. inflata]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/297 (74%), Positives = 254/297 (85%), Gaps = 9/297 (3%)

Query: 1   MARPQHHFQQNYQQPQQQ-SKSFRNLYA-MDGQISPPVAYYSSANNLQDQSQHPPYIPPF 58
           MA P HH Q + QQ  QQ SKS+R++Y  MDGQIS PVAY++ +N L +QSQHPPYIPPF
Sbjct: 1   MALPHHHLQLHIQQQPQQQSKSYRDIYNNMDGQISTPVAYFNGSN-LPEQSQHPPYIPPF 59

Query: 59  HVVGFAPGPVNATDGSDGGADLQWNSGLEPKRKRLKEQDFLENN-SQISSVDFLQARPVS 117
            VVG APG V+     DGG DLQWN GLEPKRKR KEQDFLENN SQISS+DFLQ R VS
Sbjct: 60  QVVGLAPGLVD-----DGGLDLQWNYGLEPKRKRPKEQDFLENNNSQISSIDFLQPRSVS 114

Query: 118 TGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQA 177
           TGLGLSLDN R+ASS DSA L  +GDDI+ ELQRQDAEIDR++KVQGDRLRQAI EKVQA
Sbjct: 115 TGLGLSLDNGRLASSGDSAFLGLVGDDIERELQRQDAEIDRYIKVQGDRLRQAILEKVQA 174

Query: 178 NQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMIN 237
           NQLQT++ VE+KVI+KLREKE EVE+INK+N+ELE R EQL++EA AWQQRA++NEN+IN
Sbjct: 175 NQLQTVTYVEEKVIQKLREKETEVEDINKKNMELELRTEQLALEANAWQQRAKYNENLIN 234

Query: 238 ALKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKM 294
            LKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRA D H+LC+++N+MKELMTCK+
Sbjct: 235 TLKVNLQHVYAQSRDSKEGCGDSEVDDTASCCNGRATDLHLLCRDSNEMKELMTCKV 291

Source: Petunia integrifolia subsp. inflata

Species: Petunia integrifolia

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
TAIR|locus:2825812	325	SBP1 "S-ribonuclease binding p	0.882	0.809	0.659	1.5e-90
TAIR|locus:2036596	340	AT1G60610 [Arabidopsis thalian	0.661	0.579	0.330	2.5e-26
TAIR|locus:2019983	339	AT1G10650 [Arabidopsis thalian	0.677	0.595	0.348	7.6e-25
TAIR|locus:2207385	358	BRG2 "BOI-related gene 2" [Ara	0.744	0.620	0.338	1.6e-22
TAIR|locus:2089225	335	BRG3 "BOI-related gene 3" [Ara	0.553	0.492	0.337	1.7e-18
TAIR|locus:2171042	300	AT5G47050 [Arabidopsis thalian	0.419	0.416	0.379	2.2e-18
TAIR|locus:2129336	314	AT4G17680 [Arabidopsis thalian	0.493	0.468	0.337	5.3e-17
TAIR|locus:2131571	265	AT4G35070 "AT4G35070" [Arabido	0.416	0.467	0.304	2.3e-16
TAIR|locus:2035564	312	AT1G32740 "AT1G32740" [Arabido	0.630	0.602	0.292	6.6e-16
TAIR|locus:2133990	304	RING [Arabidopsis thaliana (ta	0.483	0.473	0.340	9.7e-14

TAIR|locus:2825812 SBP1 "S-ribonuclease binding protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
 Identities = 182/276 (65%), Positives = 217/276 (78%)

Query:    28 MDGQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPGPVNATDGSDGG--ADLQWNSG 85
             +DGQISP + +  S  NL DQSQHPPYIPPFHV GFAPGPV   DGSDGG  AD +WN G
Sbjct:    19 IDGQISPELGFNRS-ENLHDQSQHPPYIPPFHVAGFAPGPVVQIDGSDGGNGADFEWNYG 77

Query:    86 L--EPKRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLSFIGD 143
             L  EP+R+R+KEQDFLENNSQISS+DFLQAR VSTGLGLSLDN R+ASS  SALLS +GD
Sbjct:    78 LGLEPRRERIKEQDFLENNSQISSIDFLQARSVSTGLGLSLDNARVASSDGSALLSLVGD 137

Query:   144 DIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVEN 203
             DID ELQRQDA+IDRFLK+QGD+LR AI +K++  Q +T+SL+E+KV++KLREK+ E+E 
Sbjct:   138 DIDRELQRQDADIDRFLKIQGDQLRHAILDKIKRGQQKTVSLMEEKVVQKLREKDEELER 197

Query:   204 INKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVD 263
             IN++N ELE RMEQL++EA AWQQRA++NENMI AL  NL     + RDS EGCGDSEVD
Sbjct:   198 INRKNKELEVRMEQLTMEAEAWQQRAKYNENMIAALNYNLDRAQGRPRDSIEGCGDSEVD 257

Query:   264 DTASCCNGRAIDFHILCKENNDMKELMTCKMY-IRE 298
             DTASC NGR  D       NN+ K +M C+   +RE
Sbjct:   258 DTASCFNGR--D-----NSNNNTKTMMMCRFCGVRE 286

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0007165 "signal transduction" evidence=RCA

GO:0009755 "hormone-mediated signaling pathway" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

TAIR|locus:2036596 AT1G60610 [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 72/218 (33%), Positives = 128/218 (58%)

Query:    74 SDGGADLQWNSGLEPKRKRLKEQDF-LENNSQISSVDFLQARPVSTGLGLSLDNTRMASS 132
             S  G + + N+ ++ ++K     ++   NN+ +   +  +   VSTGL LS D+    SS
Sbjct:    62 STRGRETENNNIMQRQQKLQISLNYNYNNNNTVVQDEVPKQNLVSTGLRLSYDDDERNSS 121

Query:   133 ADSA-------LLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISL 185
               SA       +   +GD+I  +L RQ+ E+D+F+K + D++ + +++  Q +    ++ 
Sbjct:   122 VTSANGSITTPVYQSLGDNIRLDLNRQNDELDQFIKFRADQMAKGVRDIKQRHVTSFVTA 181

Query:   186 VEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQH 245
             +E  V +KL+EK+ E+E++NK+N EL ++++Q++VEA  W  +A++NE+++NALKVNLQ 
Sbjct:   182 LEKDVSKKLQEKDHEIESMNKKNRELVDKIKQVAVEAQNWHYKAKYNESVVNALKVNLQQ 241

Query:   246 VYAQSRDS-------------KEGCGDSEVDDTASCCN 270
             V +   D+             KEG GDSE+DD A+  N
Sbjct:   242 VMSHGNDNNAVGGGVADHHQMKEGFGDSEIDDEAASYN 279

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2019983 AT1G10650 [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 78/224 (34%), Positives = 124/224 (55%)

Query:    89 KRKRLKEQDFLENNSQISSV--DFLQARPVSTGLGLSLDNTRMASSADSA---------L 137
             +R++ K Q  L  N   +SV  +  +   VSTGL LS D+    SS  SA         +
Sbjct:    75 QRQQQKLQMSLNYNYNNTSVREEVPKENLVSTGLRLSYDDDEHNSSVTSASGSILAASPI 134

Query:   138 LSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREK 197
                + D +  +L RQ  E D+F+K+Q  ++ + +++  Q +    ++ +E  V +KL+EK
Sbjct:   135 FQSLDDSLRIDLHRQKDEFDQFIKIQAAQMAKGVRDMKQRHIASFLTTLEKGVSKKLQEK 194

Query:   198 EAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQ----H---VYAQS 250
             + E+ ++NK+N EL ER++Q+++EA  W  RA++NE+++N LK NLQ    H   V A +
Sbjct:   195 DHEINDMNKKNKELVERIKQVAMEAQNWHYRAKYNESVVNVLKANLQQAMSHNNSVIAAA 254

Query:   251 RDSKEGCGDSEVDDTASCCNGRAIDFHILCKENNDMKELMTCKM 294
                KEG GDSE+DD AS      ID +     N  + + M CKM
Sbjct:   255 DQGKEGFGDSEIDDAASSY----IDPNNNNNNNMGIHQRMRCKM 294

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2207385 BRG2 "BOI-related gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 85/251 (33%), Positives = 126/251 (50%)

Query:    30 GQISPPVAYYSSANNLQDQSQHPPYIPPFHVVGFAPG-PVNATDGSDGGADLQWNSGLEP 88
             G +SP    +S  N+    +   P  P  HV G +   P  A   +DG  +L       P
Sbjct:    44 GVVSP----FSVPNHTSTTTTATP--PLLHVYGGSDTIPTTAGYYADGATNLDCEFFPLP 97

Query:    89 KRKRLKEQDFLENNSQISSVDFLQARPVSTGLGLSLDNTRMASSADSALLSFIGDDID-- 146
              RKR ++      +S+ +    L   P S+    S  N    ++  + L SF+G DID  
Sbjct:    98 TRKRSRD------SSRSNYHHLLLQNPRSS----SCVNAATTTTT-TTLFSFLGQDIDIS 146

Query:   147 SELQRQDAEIDRFLKV---QGDRLRQAIQEKVQANQLQTI-SLVEDKVIEKLREKEAEVE 202
             S + +Q  EIDRF+ +   Q +R++  I+EK +  Q +TI   +E  ++++LR KE E E
Sbjct:   147 SHMNQQQHEIDRFVSLHLYQMERVKYEIEEK-RKRQARTIMEAIEQGLVKRLRVKEEERE 205

Query:   203 NINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCG---- 258
              I K N  LEER++ LS+E   W+  A+ NE   N L+ NL+HV AQ +D   G G    
Sbjct:   206 RIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEKN 265

Query:   259 DSEVDDTASCC 269
              +E DD  SCC
Sbjct:   266 MNEEDDAESCC 276

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043067 "regulation of programmed cell death" evidence=IMP

TAIR|locus:2089225 BRG3 "BOI-related gene 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 59/175 (33%), Positives = 94/175 (53%)

Query:   102 NSQISSVDFLQARPVSTGLGLSLDNTRMASSADSAL-------LSFIGDDIDSELQRQDA 154
             NS  ++VDFL  RPVS+      ++  +  SA   +       L F+G D+ S +Q+   
Sbjct:    83 NSD-NNVDFL--RPVSSRKRSREESVVLNPSAYMQIQKNPTDPLMFLGQDLSSNVQQHHF 139

Query:   155 EIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEER 214
             +IDR +    +R+R  I+EK +    + +  VE  +++ LR K+ E+ +I K NL LEE+
Sbjct:   140 DIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHIGKLNLFLEEK 199

Query:   215 MEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTASCC 269
             ++ L VE   W+  A+ NE  +NAL+ NLQ V A    ++     +  DD  SCC
Sbjct:   200 VKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVADDAQSCC 254

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0043067 "regulation of programmed cell death" evidence=IMP

TAIR|locus:2171042 AT5G47050 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 49/129 (37%), Positives = 78/129 (60%)

Query:   116 VSTGLGLSLDNTRMASSADSALLSF-IGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEK 174
             VSTGL LS + ++   + +   LSF I  D+  E++ Q  E++RFL++QG++L++ + E 
Sbjct:    79 VSTGLRLSREQSQ---NQEQRFLSFPITGDVAGEIKSQTDELNRFLQIQGEQLKRMLAEN 135

Query:   175 VQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNEN 234
              + N  + +   E+ V  +LREKEAE+E   +R++ELE R  Q+  EA AWQ RA   E 
Sbjct:   136 SERNYRELLRTTEESVRRRLREKEAEIEKATRRHVELEARATQIETEARAWQMRAAAREA 195

Query:   235 MINALKVNL 243
                +L+  L
Sbjct:   196 EATSLQAQL 204

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2129336 AT4G17680 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 52/154 (33%), Positives = 83/154 (53%)

Query:   103 SQISSV-DFLQARP--VSTGLGLSLDNTRMASSADSALLSFIGDDIDSELQRQDAEIDRF 159
             SQ+  + + LQ  P  VSTGL L  D     S       S +  D+  +++RQ  E+DRF
Sbjct:    81 SQVIDITELLQKTPNVVSTGLRLFHDQ----SQNQQQFFSSLPGDVTGKIKRQRDELDRF 136

Query:   160 LKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLS 219
             ++ QG+ LR+ + +  +   ++ +   E+ V  KLR+KEAE+E   +R+ ELE R+  + 
Sbjct:   137 IQTQGEELRRTLADNRERRYVELLCAAEEIVGRKLRKKEAELEKATRRHAELEARVAHIV 196

Query:   220 VEAGAWQQRARHNENMINALKVNLQHVYAQSRDS 253
              EA  WQ RA   E  +++L  +LQ   A   D+
Sbjct:   197 EEARNWQLRAATREAEVSSLHAHLQQAIANRLDT 230

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0031347 "regulation of defense response" evidence=IMP

TAIR|locus:2131571 AT4G35070 "AT4G35070" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/125 (30%), Positives = 73/125 (58%)

Query:   147 SELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINK 206
             +++++Q  EID+F+K+Q +RLR  +QE+ +      +  +E K +  + +KE E+     
Sbjct:    76 AQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLLMSQKEEEMSKALN 135

Query:   207 RNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTA 266
             +N+ELE+ + ++ +E   WQ+ AR NE ++  L   L+ V  ++    +  G++EV+D  
Sbjct:   136 KNMELEDLLRKMEMENQTWQRMARENEAIVQTLNTTLEQVRERAATCYDA-GEAEVEDEG 194

Query:   267 SCCNG 271
             S C G
Sbjct:   195 SFCGG 199

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2035564 AT1G32740 "AT1G32740" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 6.6e-16, P = 6.6e-16
 Identities = 59/202 (29%), Positives = 96/202 (47%)

Query:    79 DLQWNSGLEPKRKRLKEQD---FLENNS----QISSVDFLQA--RPVSTGLGLSLDNTRM 129
             ++ +N+G   +RKR +E +    L   S    Q+  +  L     P S  +   L   R+
Sbjct:    43 NMLFNNGSSNQRKRRRETNNHQLLPMQSHQFPQVIDLSLLHNYNHPPSNMVHTGL---RL 99

Query:   130 ASSADSAL-LSFIGDDI-DSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVE 187
              S  D A  +S + +D+  + + RQ  E+D FL  Q + LR+ + EK + +    +  VE
Sbjct:   100 FSGEDQAQKISHLSEDVFAAHINRQSEELDEFLHAQAEELRRTLAEKRKMHYKALLGAVE 159

Query:   188 DKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVY 247
             + ++ KLREKE E+E   +R+ EL  R  QL  E   WQ+RA+ +E+   +L+  LQ   
Sbjct:   160 ESLVRKLREKEVEIERATRRHNELVARDSQLRAEVQVWQERAKAHEDAAASLQSQLQQAV 219

Query:   248 AQSRDSKEGCGDSEVDDTASCC 269
              Q         DS   +    C
Sbjct:   220 NQCAGGCVSAQDSRAAEEGLLC 241

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2133990 RING [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 9.7e-14, P = 9.7e-14
 Identities = 50/147 (34%), Positives = 78/147 (53%)

Query:   128 RMASSADSALLSFIGDDIDSELQ-RQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLV 186
             R + + DS+  S I  ++ S++Q +Q +EIDRF+  Q ++LR  I+ + Q       S V
Sbjct:    94 RRSVAFDSSSPSLINVELVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAV 153

Query:   187 EDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHV 246
             ++ + +KL+EK+ E+  I   N  L+ER++ L VE   W+  A+ NE   N L+ NL  V
Sbjct:   154 QNVIAKKLKEKDDEIVRIRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQV 213

Query:   247 YAQSRDSKEGCGDSEVDDTASC--CNG 271
              AQ           E D  +SC  C G
Sbjct:   214 LAQLETFPTASAVVEDDAESSCGSCCG 240

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009739 "response to gibberellin stimulus" evidence=IEP

GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0043069 "negative regulation of programmed cell death" evidence=IMP

GO:2000117 "negative regulation of cysteine-type endopeptidase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.14830001 hypothetical protein (337 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	298
KOG1100	207	consensus Predicted E3 ubiquitin ligase [Posttrans	99.92
PF00038	312	Filament: Intermediate filament protein; InterPro:	89.63
PF09726	697	Macoilin: Transmembrane protein; InterPro: IPR0191	88.13
PF15619	194	Lebercilin: Ciliary protein causing Leber congenit	86.07
KOG0804	493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	85.68
PF12240	205	Angiomotin_C: Angiomotin C terminal; InterPro: IPR	85.19
PF11180	192	DUF2968: Protein of unknown function (DUF2968); In	80.43

>KOG1100 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=3e-25  Score=200.26  Aligned_cols=126  Identities=45%  Similarity=0.738  Sum_probs=117.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043286          144 DIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAG  223 (298)
Q Consensus       144 ~L~sqLqqQ~~EID~~lr~Q~ErLR~~L~E~rqRh~r~ll~avE~~~~~rLReKE~EIera~rrn~ELEErlrql~aE~Q  223 (298)
                      +|++++++|..|||+|+.+|.|+||..+.+.++++.+.++.++|..+.++||+|++||++++++|++|+++++++++|+|
T Consensus        15 ~~~~~~~~q~~~id~f~~~~~~~l~~~~~~~~~~~~~~~l~~~e~~~~~~l~~k~~ei~~~~~~~~~l~~~~~~~~~e~~   94 (207)
T KOG1100|consen   15 DLASDIQRQSDEIDRFLKIQGEQLRRELEENRQRELRNLLKAVEEALVKKLREKDEEIERIGNLNWELEERVKSLYVEAQ   94 (207)
T ss_pred             cceeecccccchhhHHHHhhHHHHHHHHHHhChHHHHHHHHHHHHHHHHHhhcchhHHHhcccccceehhhhhhhhhhHH
Confidence            78889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHhc----c---CCcCCCCCCCCCCCcccc
Q 043286          224 AWQQRARHNENMINALKVNLQHVYAQS----R---DSKEGCGDSEVDDTASCC  269 (298)
Q Consensus       224 aWq~~A~snEA~an~Lra~LqQvlaq~----~---~~~eg~gdse~DDA~ScC  269 (298)
                      .|+++|++||+++++|+.+|+|++++.    .   .+..++|+.+.||++|+.
T Consensus        95 ~w~~~a~~ne~~~~~l~~nl~q~~~~~~~~~~~~~~~~~~~g~~~~~~~~s~~  147 (207)
T KOG1100|consen   95 IWRDRAQTNEATVNSLRTNLDQVLAQCPASAPAEERGQKSCGDREADDGKSSY  147 (207)
T ss_pred             HHHHHHHhChHHHHHHHHHHHHHHHhcccccCchhhhccccCccccccccccc
Confidence            999999999999999999999999984    1   123357888888888843

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope

Probab=89.63  E-value=18  Score=33.83  Aligned_cols=99  Identities=18%  Similarity=0.316  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhHHHHHHHHHHHHHHHHHHHHH----
Q 043286          145 IDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVED--KVIEKLREKEAEVENINKRNLELEERMEQL----  218 (298)
Q Consensus       145 L~sqLqqQ~~EID~~lr~Q~ErLR~~L~E~rqRh~r~ll~avE~--~~~~rLReKE~EIera~rrn~ELEErlrql----  218 (298)
                      ....+.+-+.|++...+.+.+.|+.....    ....+-.+=+.  .+...+.....||+.+..+|..|+.+|..+    
T Consensus       178 ye~~~~~~~~e~e~~y~~k~~~l~~~~~~----~~~~~~~~~~E~~~~r~~~~~l~~el~~l~~~~~~Le~~l~~le~~~  253 (312)
T PF00038_consen  178 YEEIAQKNREELEEWYQSKLEELRQQSEK----SSEELESAKEELKELRRQIQSLQAELESLRAKNASLERQLRELEQRL  253 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhhhhhhhhcccccccccccccc----cccccchhHhHHHHHHhhhhHhhhhhhccccchhhhhhhHHHHHHHH
Confidence            34455677778888888888887765533    22222222222  445668899999999999999999999765    


Q ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 043286          219 SVEAGAWQQRARHNENMINALKVNLQHVY  247 (298)
Q Consensus       219 ~aE~QaWq~~A~snEA~an~Lra~LqQvl  247 (298)
                      ..+.+.|+..-..-|+....|+..+++.+
T Consensus       254 ~~~~~~~~~~i~~le~el~~l~~~~~~~~  282 (312)
T PF00038_consen  254 DEEREEYQAEIAELEEELAELREEMARQL  282 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhccchhHHHHHHHHHHHH
Confidence            57778899999999999999999887654

They generally form filamentous structures 8 to 14 nm wide. IF proteins are members of a very large multigene family of proteins which has been subdivided in five major subgroups: Type I: Acidic cytokeratins. Type II: Basic cytokeratins. Type III: Vimentin, desmin, glial fibrillary acidic protein (GFAP), peripherin, and plasticin. Type IV: Neurofilaments L, H and M, alpha-internexin and nestin. Type V: Nuclear lamins A, B1, B2 and C. All IF proteins are structurally similar in that they consist of: a central rod domain comprising some 300 to 350 residues which is arranged in coiled-coiled alpha-helices, with at least two short characteristic interruptions; a N-terminal non-helical domain (head) of variable length; and a C-terminal domain (tail) which is also non-helical, and which shows extreme length variation between different IF proteins. While IF proteins are evolutionary and structurally related, they have limited sequence homologies except in several regions of the rod domain. This entry represents the central rod domain found in IF proteins.; PDB: 3TNU_B 3KLT_D 1GK4_F 3TRT_A 3G1E_A 3UF1_C 1GK6_B 1GK7_A 3TYY_B 3V4W_A ....

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes

Probab=88.13  E-value=20  Score=38.65  Aligned_cols=53  Identities=19%  Similarity=0.310  Sum_probs=39.3

Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 043286          192 EKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQ  244 (298)
Q Consensus       192 ~rLReKE~EIera~rrn~ELEErlrql~aE~QaWq~~A~snEA~an~Lra~Lq  244 (298)
                      .|.|+.|.||.++++.....||+++.++.|.+.-+..-+.++.-+-.|.+.|.
T Consensus       545 ~r~~~lE~E~~~lr~elk~kee~~~~~e~~~~~lr~~~~e~~~~~e~L~~aL~  597 (697)
T PF09726_consen  545 QRRRQLESELKKLRRELKQKEEQIRELESELQELRKYEKESEKDTEVLMSALS  597 (697)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence            47788899999999999999999999999998777753334333344444443

; GO: 0016021 integral to membrane

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease

Probab=86.07  E-value=27  Score=31.87  Aligned_cols=93  Identities=19%  Similarity=0.339  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH--------HHH
Q 043286          148 ELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERME--------QLS  219 (298)
Q Consensus       148 qLqqQ~~EID~~lr~Q~ErLR~~L~E~rqRh~r~ll~avE~~~~~rLReKE~EIera~rrn~ELEErlr--------ql~  219 (298)
                      .++....++.++|.-|.+.+|. |.+.-++ +    ..-+..+-++||++++||.++.-.+..|...+.        .|.
T Consensus        51 k~e~~e~~Lpqll~~h~eEvr~-Lr~~LR~-~----q~~~r~~~~klk~~~~el~k~~~~l~~L~~L~~dknL~eReeL~  124 (194)
T PF15619_consen   51 KYEDTEAELPQLLQRHNEEVRV-LRERLRK-S----QEQERELERKLKDKDEELLKTKDELKHLKKLSEDKNLAEREELQ  124 (194)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHH-HHHHHHH-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHH
Confidence            4556667888889999888887 5444222 1    223455667899999999988877776655333        233


Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 043286          220 VEAGAWQQRARHNENMINALKVNLQHV  246 (298)
Q Consensus       220 aE~QaWq~~A~snEA~an~Lra~LqQv  246 (298)
                      -+-..-......++-.+..|..+|+-.
T Consensus       125 ~kL~~~~~~l~~~~~ki~~Lek~leL~  151 (194)
T PF15619_consen  125 RKLSQLEQKLQEKEKKIQELEKQLELE  151 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444455556666666666666543

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]

Probab=85.68  E-value=43  Score=34.89  Aligned_cols=96  Identities=17%  Similarity=0.215  Sum_probs=68.4

Q ss_pred             HHHHHHHHHH----HHHHHHHHhhHHHHH----HHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 043286          145 IDSELQRQDA----EIDRFLKVQGDRLRQ----AIQEKVQ-ANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERM  215 (298)
Q Consensus       145 L~sqLqqQ~~----EID~~lr~Q~ErLR~----~L~E~rq-Rh~r~ll~avE~~~~~rLReKE~EIera~rrn~ELEErl  215 (298)
                      |.++|+-|+.    .+-.+.+.|.+.+|.    .++|... .+--..+.++...+-+||.+-...+++..++..++.|-=
T Consensus       326 l~sqleSqr~y~e~~~~e~~qsqlen~k~~~e~~~~e~~~l~~~~~~~e~~kk~~e~k~~q~q~k~~k~~kel~~~~E~n  405 (493)
T KOG0804|consen  326 LTSQLESQRKYYEQIMSEYEQSQLENQKQYYELLITEADSLKQESSDLEAEKKIVERKLQQLQTKLKKCQKELKEEREEN  405 (493)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455655553    334444445555554    4445444 344457788888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHH
Q 043286          216 EQLSVEAGAWQQRARHNENMINALK  240 (298)
Q Consensus       216 rql~aE~QaWq~~A~snEA~an~Lr  240 (298)
                      +.|..+-+.|++.++.-|..-+...
T Consensus       406 ~~l~knq~vw~~kl~~~~e~~~~~~  430 (493)
T KOG0804|consen  406 KKLIKNQDVWRGKLKELEEREKEAL  430 (493)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876554443333

>PF12240 Angiomotin_C: Angiomotin C terminal; InterPro: IPR024646 This domain represents the C-terminal region of angiomotin

Probab=85.19  E-value=24  Score=32.96  Aligned_cols=82  Identities=17%  Similarity=0.311  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHhhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH---------------HhHHHHHHHHHHHHHHHHH
Q 043286          153 DAEIDRFLKVQGDRLRQ---AIQEKVQANQLQTISLVEDKVIEKLR---------------EKEAEVENINKRNLELEER  214 (298)
Q Consensus       153 ~~EID~~lr~Q~ErLR~---~L~E~rqRh~r~ll~avE~~~~~rLR---------------eKE~EIera~rrn~ELEEr  214 (298)
                      +.-=.++|.+++|-.+-   -|+|-.-|| .+ +.|++.+++.|.+               .-++||-.+++|+.|||-|
T Consensus        67 rEkEErILaLEad~~kWEqkYLEEs~mrq-~a-~dAaa~aa~~rdttiI~~s~~~s~~~s~r~~eel~~a~~K~qemE~R  144 (205)
T PF12240_consen   67 REKEERILALEADMTKWEQKYLEESAMRQ-FA-MDAAATAAAQRDTTIINHSPSESYNSSLREEEELHMANRKCQEMENR  144 (205)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHhhhHHHHHHHHHhcCCCCCCCccccchHHHHHhhhhHHHHHHH
Confidence            33445889999887763   255533222 22 3455555566666               3379999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 043286          215 MEQLSVEAGAWQQRARHNENMINALKVNL  243 (298)
Q Consensus       215 lrql~aE~QaWq~~A~snEA~an~Lra~L  243 (298)
                      |+.|.++-       .+.+||+..|+...
T Consensus       145 IK~LhaqI-------~EKDAmIkVLQqrs  166 (205)
T PF12240_consen  145 IKALHAQI-------AEKDAMIKVLQQRS  166 (205)
T ss_pred             HHHHHHHH-------HHHHHHHHHHHhhc
Confidence            99998764       56899998887643

Angiomotin regulates the action of angiogenesis-inhibitor angiostatin []. The C-terminal region of angiomotin appears to be involved in directing the protein chemotactically [].

>PF11180 DUF2968: Protein of unknown function (DUF2968); InterPro: IPR021350 This family of proteins has no known function

Probab=80.43  E-value=49  Score=30.67  Aligned_cols=81  Identities=19%  Similarity=0.280  Sum_probs=52.9

Q ss_pred             hhhH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 043286          142 GDDI-DSELQRQDAEIDRFLKVQGDRLRQAIQEK-VQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLS  219 (298)
Q Consensus       142 ~d~L-~sqLqqQ~~EID~~lr~Q~ErLR~~L~E~-rqRh~r~ll~avE~~~~~rLReKE~EIera~rrn~ELEErlrql~  219 (298)
                      ..+| ..+|+-|+.-+|++|..+.+|+...=.+. +.+.+.+-+..-...+.+-..+.+.|-..+..+..+|..+|++|.
T Consensus       102 ~~eirR~~LeAQka~~eR~ia~~~~ra~~LqaDl~~~~~Q~~~va~~Q~q~r~ea~aL~~e~~aaqaQL~~lQ~qv~~Lq  181 (192)
T PF11180_consen  102 DVEIRRAQLEAQKAQLERLIAESEARANRLQADLQIARQQQQQVAARQQQARQEAQALEAERRAAQAQLRQLQRQVRQLQ  181 (192)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456 46788888888888887766655433332 234444555555556666666777777777777777777777776


Q ss_pred             HHH
Q 043286          220 VEA  222 (298)
Q Consensus       220 aE~  222 (298)
                      .+.
T Consensus       182 ~q~  184 (192)
T PF11180_consen  182 RQA  184 (192)
T ss_pred             HHh
Confidence            554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	298
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 3e-05
 Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 36/183 (19%)

Query: 137 LLSFIGDDIDSELQRQDAEIDRFLKVQGDRLRQAIQEKVQANQLQT-------ISLV--- 186
            LS I + I   L       D +  V  D+L   I+  +  N L+          L    
Sbjct: 329 RLSIIAESIRDGLAT----WDNWKHVNCDKLTTIIESSL--NVLEPAEYRKMFDRLSVFP 382

Query: 187 ED-----KVIEKL--REKEAEVENI----NKRNLELEERMEQLSVEAGAWQQRAR-HNEN 234
                   ++  +     +++V  +    +K +L +E++ ++ ++   +     +   EN
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL-VEKQPKESTISIPSIYLELKVKLEN 441

Query: 235 MINALKVNLQHVYAQSRDSKEGCGDSEVDD-TASCCNGRAIDFHILCKENNDMKELMTCK 293
                +  + H         +      +D    S      I  H+   E+ +   L    
Sbjct: 442 EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS-----HIGHHLKNIEHPERMTLFR-M 495

Query: 294 MYI 296
           +++
Sbjct: 496 VFL 498

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 51/212 (24%)

Query: 95  EQDFLENNSQISSVDFLQARPVSTGLGLS---LDNTRMASSADSALLSFIGDDIDSELQR 151
           E  F++N       D    + +     LS   +D+  M+  A S  L        + L +
Sbjct: 26  EDAFVDNFDCKDVQDMP--KSI-----LSKEEIDHIIMSKDAVSGTLRLF----WTLLSK 74

Query: 152 QDAEIDRFLKVQGDRLRQA---IQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRN 208
           Q+  + +F+    + LR     +   ++  Q Q  S++    IE+      + +   K N
Sbjct: 75  QEEMVQKFV---EEVLRINYKFLMSPIKTEQRQP-SMMTRMYIEQRDRLYNDNQVFAKYN 130

Query: 209 LELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYAQSRDSKEGCGDSEVDDTASC 268
           +   +   +L           R  +N++         +         G G + V      
Sbjct: 131 VSRLQPYLKLR----QALLELRPAKNVL---------IDGVL-----GSGKTWV--ALDV 170

Query: 269 CNGRAI----DFHIL------CKENNDMKELM 290
           C    +    DF I       C     + E++
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEML 202

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	298
2oqq_A	42	Transcription factor HY5; homodimer leucine zipper	94.1
2v71_A	189	Nuclear distribution protein NUDE-like 1; developm	93.93
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	88.9
3oja_B	597	Anopheles plasmodium-responsive leucine-rich REPE	87.04
4etp_A	403	Kinesin-like protein KAR3; kinesin motor protein,	86.65
3oja_B	597	Anopheles plasmodium-responsive leucine-rich REPE	84.56
3mq9_A	471	Bone marrow stromal antigen 2 fused to maltose-BI	84.1
2v66_B	111	Nuclear distribution protein NUDE-like 1; structur	80.96
1uii_A	83	Geminin; human, DNA replication, cell cycle; 2.00A	80.45

>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}

Probab=94.10  E-value=0.15  Score=35.42  Aligned_cols=35  Identities=31%  Similarity=0.459  Sum_probs=27.7

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043286          196 EKEAEVENINKRNLELEERMEQLSVEAGAWQQRAR  230 (298)
Q Consensus       196 eKE~EIera~rrn~ELEErlrql~aE~QaWq~~A~  230 (298)
                      +.|.....+..+|.|||+|+..|..|++.-+.+-+
T Consensus         7 eLE~r~k~le~~naeLEervstLq~EN~mLRqvl~   41 (42)
T 2oqq_A            7 ELENRVKDLENKNSELEERLSTLQNENQMLRHILK   41 (42)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence            34445555667999999999999999999887643

>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}

Probab=93.93  E-value=1.4  Score=39.00  Aligned_cols=73  Identities=23%  Similarity=0.313  Sum_probs=52.5

Q ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH----H
Q 043286          161 KVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENM----I  236 (298)
Q Consensus       161 r~Q~ErLR~~L~E~rqRh~r~ll~avE~~~~~rLReKE~EIera~rrn~ELEErlrql~aE~QaWq~~A~snEA~----a  236 (298)
                      +.+.+.|+..|.|- +-.++.    +|.       |-|.||+.+.+++.+|..++.+|..|...|+.+....-.-    +
T Consensus        23 ~q~~~~le~El~EF-qesSrE----LE~-------ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~   90 (189)
T 2v71_A           23 KQSFQEARDELVEF-QEGSRE----LEA-------ELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQV   90 (189)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHH----HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH-HHHHHH----HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556666777664 333332    232       7788999999999999999999999999999988777555    4


Q ss_pred             HHHHHHHHH
Q 043286          237 NALKVNLQH  245 (298)
Q Consensus       237 n~Lra~LqQ  245 (298)
                      +.|...|.+
T Consensus        91 ~~Lq~el~~   99 (189)
T 2v71_A           91 SVLEDDLSQ   99 (189)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            555544443

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=88.90  E-value=1.9  Score=31.50  Aligned_cols=37  Identities=22%  Similarity=0.290  Sum_probs=31.7

Q ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043286          193 KLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRA  229 (298)
Q Consensus       193 rLReKE~EIera~rrn~ELEErlrql~aE~QaWq~~A  229 (298)
                      +..+-+.+++.+...|.+|+.++..|..|.+.|..+-
T Consensus        24 ~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll   60 (63)
T 1ci6_A           24 EQEALTGECKELEKKNEALKERADSLAKEIQYLKDLI   60 (63)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4556677889999999999999999999999988763

>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=87.04  E-value=16  Score=35.20  Aligned_cols=66  Identities=14%  Similarity=0.070  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 043286          181 QTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHV  246 (298)
Q Consensus       181 ~ll~avE~~~~~rLReKE~EIera~rrn~ELEErlrql~aE~QaWq~~A~snEA~an~Lra~LqQv  246 (298)
                      ..+..+...+..+...++.++.+..+...++++.++++..|...|...-+.......-|+..++..
T Consensus       505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~  570 (597)
T 3oja_B          505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLK  570 (597)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHH
Confidence            334444555555666666666666666667777777777777777777766666666555444433

>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}

Probab=86.65  E-value=1.8  Score=41.65  Aligned_cols=57  Identities=12%  Similarity=0.228  Sum_probs=51.9

Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 043286          192 EKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINALKVNLQHVYA  248 (298)
Q Consensus       192 ~rLReKE~EIera~rrn~ELEErlrql~aE~QaWq~~A~snEA~an~Lra~LqQvla  248 (298)
                      .++.++++||+.+.++..+|++.++++..|...+...-...|..---|+++|+.+.-
T Consensus         3 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkg   59 (403)
T 4etp_A            3 SKIAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRG   59 (403)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999999999999999999999998754

>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=84.56  E-value=30  Score=33.32  Aligned_cols=12  Identities=8%  Similarity=0.158  Sum_probs=6.4

Q ss_pred             HHHHHHHHHHHH
Q 043286          237 NALKVNLQHVYA  248 (298)
Q Consensus       237 n~Lra~LqQvla  248 (298)
                      +.++.+|.+...
T Consensus       568 ~~~~~~~~~l~~  579 (597)
T 3oja_B          568 SLKRQKVKQLEA  579 (597)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            334566666554

>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}

Probab=84.10  E-value=9.3  Score=36.07  Aligned_cols=24  Identities=8%  Similarity=0.173  Sum_probs=16.0

Q ss_pred             HHHHHHHHHHhhHHHHHHHHHHHH
Q 043286          153 DAEIDRFLKVQGDRLRQAIQEKVQ  176 (298)
Q Consensus       153 ~~EID~~lr~Q~ErLR~~L~E~rq  176 (298)
                      ...+.++|+.+.+++++.+.+.+.
T Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~  418 (471)
T 3mq9_A          395 ARNVTHLLQQELTEAQKGFQDVEA  418 (471)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhhhHHHHHH
Confidence            345667777777777777766543

>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}

Probab=80.96  E-value=21  Score=29.08  Aligned_cols=85  Identities=11%  Similarity=0.171  Sum_probs=63.0

Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 043286          160 LKVQGDRLRQAIQEKVQANQLQTISLVEDKVIEKLREKEAEVENINKRNLELEERMEQLSVEAGAWQQRARHNENMINAL  239 (298)
Q Consensus       160 lr~Q~ErLR~~L~E~rqRh~r~ll~avE~~~~~rLReKE~EIera~rrn~ELEErlrql~aE~QaWq~~A~snEA~an~L  239 (298)
                      |+..+++|+..+.+-+.+...+     ..-...-.-.-..||...+..+..|..+||.|++.+...-+-+|..-+.+.-+
T Consensus         8 L~~~~~~L~~E~e~~k~K~~~~-----~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~   82 (111)
T 2v66_B            8 LQADNQRLKYEVEALKEKLEHQ-----YAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDF   82 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHH
Confidence            4566667776666543332221     11111223345678999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHh
Q 043286          240 KVNLQHVYAQ  249 (298)
Q Consensus       240 ra~LqQvlaq  249 (298)
                      -++|.+++..
T Consensus        83 E~k~n~aiEr   92 (111)
T 2v66_B           83 EQRLNQAIER   92 (111)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999865

>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1

Probab=80.45  E-value=11  Score=29.41  Aligned_cols=53  Identities=21%  Similarity=0.369  Sum_probs=36.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 043286          163 QGDRLRQAIQEKVQANQLQTISLVED--KVIEKLREKEAEVENINKRNLELEERMEQL  218 (298)
Q Consensus       163 Q~ErLR~~L~E~rqRh~r~ll~avE~--~~~~rLReKE~EIera~rrn~ELEErlrql  218 (298)
                      -.++-|..|+|+||   .+|-.++++  ..-.++-.|++||......|.+|.+.+.++
T Consensus        25 Pse~YWk~lAE~RR---~AL~eaL~EN~~Lh~~ie~l~eEi~~lk~en~eL~elae~~   79 (83)
T 1uii_A           25 PSSQYWKEVAEKRR---KALYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHV   79 (83)
T ss_dssp             HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35677888888765   344455544  345667788899988888888877665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00