Citrus Sinensis ID: 043313


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPKKGSGDVIKPNEVQLSGATIA
cccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHHHHHHHHHEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHEEEEEEccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcHccHHHHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHcccccccHHHHccccccEEEEEEEc
MVSAEAARNIVGIIGNVIsfglflsptptFWRIIKrkdteefhpyAYICACMNCMFWILyglpvvhpdstlVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCyykstpkkgsgdvikpnevqlsgatia
MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKStpkkgsgdvikpnevqlsgatia
MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPKKGSGDVIKPNEVQLSGATIA
*******RNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYK************************
****EAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCY**************************
MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPKKGSGDVIKPNEVQLSGATIA
**SAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPKKGS****KPNEVQLSGATIA
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPKKGSGDVIKPNEVQLSGATIA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query240 2.2.26 [Sep-21-2011]
Q8W0K2254 Bidirectional sugar trans yes no 0.979 0.925 0.554 5e-71
A2WSD3254 Bidirectional sugar trans N/A no 0.979 0.925 0.55 3e-70
A2WSD8259 Bidirectional sugar trans N/A no 0.958 0.888 0.565 4e-70
Q8LR09259 Bidirectional sugar trans no no 0.958 0.888 0.565 4e-70
Q8LBF7258 Bidirectional sugar trans yes no 0.945 0.879 0.526 5e-68
A2YZ24266 Bidirectional sugar trans N/A no 0.987 0.890 0.491 3e-66
Q0J349265 Bidirectional sugar trans no no 0.987 0.894 0.487 2e-65
Q944M5251 Bidirectional sugar trans no no 0.979 0.936 0.549 4e-65
Q9FM10240 Bidirectional sugar trans no no 0.904 0.904 0.536 6e-63
Q8LFH5239 Bidirectional sugar trans no no 0.970 0.974 0.512 2e-62
>sp|Q8W0K2|SWT6B_ORYSJ Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. japonica GN=SWEET6B PE=2 SV=1 Back     alignment and function desciption
 Score =  267 bits (682), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 171/240 (71%), Gaps = 5/240 (2%)

Query: 1   MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILY 60
           M+S +AARN+VGIIGNVISFGLFLSP PTFWRI KRKD E+F    Y+   +NCM W+ Y
Sbjct: 1   MISPDAARNVVGIIGNVISFGLFLSPVPTFWRICKRKDVEQFKADPYLATLLNCMLWVFY 60

Query: 61  GLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLG-EVAFLGVIAV 119
           G+P+VHP+S LVVTING+GL +E  YL IF +Y+  KK  +++A+  LG E+ F+  + +
Sbjct: 61  GIPIVHPNSILVVTINGIGLIVEGTYLFIFFLYSPNKKRLRMLAV--LGVELVFMLAVIL 118

Query: 120 ITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGA 179
              +  H    R++ VGI+C  F  IMY SPL+I  KVIKTKSVEYMPFFLSL  F NG 
Sbjct: 119 GVLLSAHTHKKRSMIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGV 178

Query: 180 VWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPK--KGSGDVIKPNEVQLSGA 237
            WTAY LI+FD ++ + NGLG + GAIQLI+Y CYY++TPK  K + DV  P+ +   GA
Sbjct: 179 CWTAYALIRFDIYVTIPNGLGAIFGAIQLILYACYYRTTPKKTKAAKDVEMPSVISGPGA 238




Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
Oryza sativa subsp. japonica (taxid: 39947)
>sp|A2WSD3|SWT6B_ORYSI Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica GN=SWEET6B PE=3 SV=1 Back     alignment and function description
>sp|A2WSD8|SWT6A_ORYSI Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica GN=SWEET6A PE=3 SV=1 Back     alignment and function description
>sp|Q8LR09|SWT6A_ORYSJ Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. japonica GN=SWEET6A PE=3 SV=1 Back     alignment and function description
>sp|Q8LBF7|SWET7_ARATH Bidirectional sugar transporter SWEET7 OS=Arabidopsis thaliana GN=SWEET7 PE=2 SV=1 Back     alignment and function description
>sp|A2YZ24|SWT7B_ORYSI Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica GN=SWEET7B PE=3 SV=1 Back     alignment and function description
>sp|Q0J349|SWT7B_ORYSJ Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica GN=SWEET7B PE=3 SV=2 Back     alignment and function description
>sp|Q944M5|SWET4_ARATH Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana GN=SWEET4 PE=2 SV=1 Back     alignment and function description
>sp|Q9FM10|SWET5_ARATH Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana GN=SWEET5 PE=2 SV=2 Back     alignment and function description
>sp|Q8LFH5|SWET8_ARATH Bidirectional sugar transporter SWEET8 OS=Arabidopsis thaliana GN=SWEET8 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
224055573242 predicted protein [Populus trichocarpa] 0.995 0.987 0.691 5e-93
255552606242 conserved hypothetical protein [Ricinus 0.975 0.966 0.601 5e-77
225457069234 PREDICTED: bidirectional sugar transport 0.970 0.995 0.601 7e-76
225452486254 PREDICTED: bidirectional sugar transport 0.908 0.858 0.584 3e-71
356571441246 PREDICTED: bidirectional sugar transport 0.975 0.951 0.567 1e-69
356546178 775 PREDICTED: peptidyl-prolyl cis-trans iso 0.975 0.301 0.563 3e-69
115438366254 Os01g0605700 [Oryza sativa Japonica Grou 0.979 0.925 0.554 3e-69
388514839242 unknown [Lotus japonicus] 0.970 0.962 0.563 3e-69
225457066235 PREDICTED: bidirectional sugar transport 0.975 0.995 0.546 7e-69
449446857236 PREDICTED: bidirectional sugar transport 0.983 1.0 0.616 8e-69
>gi|224055573|ref|XP_002298546.1| predicted protein [Populus trichocarpa] gi|222845804|gb|EEE83351.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  346 bits (887), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 166/240 (69%), Positives = 191/240 (79%), Gaps = 1/240 (0%)

Query: 1   MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILY 60
           MVSAEAARN+VGIIGNVISFGLFLSP PTF+RI K+KD EEF PY Y    +NC+FWILY
Sbjct: 1   MVSAEAARNVVGIIGNVISFGLFLSPVPTFYRICKKKDVEEFQPYPYAATVLNCLFWILY 60

Query: 61  GLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVI 120
           GLP+V PDSTLVVTIN VGL LELIYLSIFC+++ Q KGRK V + L GEV F+  I V 
Sbjct: 61  GLPIVKPDSTLVVTINSVGLVLELIYLSIFCIFDTQNKGRKKVFLVLFGEVIFMAAIVVT 120

Query: 121 TFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAV 180
           TF+ FH    RTLFVG+ CDIFNI+MYASPL+I  KV+ TKSVEYMP  LSLANF NG V
Sbjct: 121 TFLAFHTHEKRTLFVGVFCDIFNILMYASPLTIVKKVVTTKSVEYMPLSLSLANFLNGCV 180

Query: 181 WTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPKKGSGDVIKPNEVQLSGATIA 240
           WTAY LI+FD FI+VSNGLG   G +QL++Y  YYKSTPK+GS DV KP+E+QLS +  A
Sbjct: 181 WTAYALIRFDIFILVSNGLGAFFGFLQLVLYAFYYKSTPKRGSQDV-KPSEIQLSASDAA 239




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552606|ref|XP_002517346.1| conserved hypothetical protein [Ricinus communis] gi|223543357|gb|EEF44888.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|225457069|ref|XP_002283068.1| PREDICTED: bidirectional sugar transporter SWEET5 [Vitis vinifera] gi|297733804|emb|CBI15051.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225452486|ref|XP_002274582.1| PREDICTED: bidirectional sugar transporter SWEET6b [Vitis vinifera] gi|296087682|emb|CBI34938.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356571441|ref|XP_003553885.1| PREDICTED: bidirectional sugar transporter SWEET6b-like [Glycine max] Back     alignment and taxonomy information
>gi|356546178|ref|XP_003541508.1| PREDICTED: peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|115438366|ref|NP_001043522.1| Os01g0605700 [Oryza sativa Japonica Group] gi|75161759|sp|Q8W0K2.1|SWT6B_ORYSJ RecName: Full=Bidirectional sugar transporter SWEET6b; Short=OsSWEET6b gi|17385713|dbj|BAB78664.1| MtN3-like [Oryza sativa Japonica Group] gi|20804777|dbj|BAB92461.1| MtN3-like [Oryza sativa Japonica Group] gi|113533053|dbj|BAF05436.1| Os01g0605700 [Oryza sativa Japonica Group] gi|125571110|gb|EAZ12625.1| hypothetical protein OsJ_02536 [Oryza sativa Japonica Group] gi|215708860|dbj|BAG94129.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|388514839|gb|AFK45481.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|225457066|ref|XP_002279850.1| PREDICTED: bidirectional sugar transporter SWEET5 [Vitis vinifera] gi|147768304|emb|CAN64755.1| hypothetical protein VITISV_010543 [Vitis vinifera] gi|297733802|emb|CBI15049.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449446857|ref|XP_004141187.1| PREDICTED: bidirectional sugar transporter SWEET5-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
UNIPROTKB|Q8W0K2254 SWEET6B "Bidirectional sugar t 0.970 0.917 0.566 2.7e-68
UNIPROTKB|A2WSD8259 SWEET6A "Bidirectional sugar t 0.979 0.907 0.571 7.2e-68
UNIPROTKB|Q8LR09259 SWEET6A "Bidirectional sugar t 0.979 0.907 0.571 7.2e-68
UNIPROTKB|A2WSD3254 SWEET6B "Bidirectional sugar t 0.970 0.917 0.561 9.2e-68
TAIR|locus:505006381251 SWEET4 [Arabidopsis thaliana ( 0.975 0.932 0.551 8.2e-67
TAIR|locus:2123426258 SWEET7 [Arabidopsis thaliana ( 0.958 0.891 0.526 6.7e-65
UNIPROTKB|A2YZ24266 SWEET7B "Bidirectional sugar t 0.916 0.827 0.520 3e-62
UNIPROTKB|Q0J349265 SWEET7B "Bidirectional sugar t 0.916 0.830 0.515 1.3e-61
TAIR|locus:2173782239 SWEET8 [Arabidopsis thaliana ( 0.966 0.970 0.514 4.3e-61
TAIR|locus:2170748240 AtVEX1 "VEGETATIVE CELL EXPRES 0.904 0.904 0.536 1.2e-60
UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 137/242 (56%), Positives = 174/242 (71%)

Query:     1 MVSAEAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILY 60
             M+S +AARN+VGIIGNVISFGLFLSP PTFWRI KRKD E+F    Y+   +NCM W+ Y
Sbjct:     1 MISPDAARNVVGIIGNVISFGLFLSPVPTFWRICKRKDVEQFKADPYLATLLNCMLWVFY 60

Query:    61 GLPVVHPDSTLVVTINGVGLALELIYLSIFCVYNRQKKGRKIVAIGLLG-EVAFLGVIAV 119
             G+P+VHP+S LVVTING+GL +E  YL IF +Y+  KK  +++A+  LG E+ F+  +AV
Sbjct:    61 GIPIVHPNSILVVTINGIGLIVEGTYLFIFFLYSPNKKRLRMLAV--LGVELVFM--LAV 116

Query:   120 ITFVVF--HNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFAN 177
             I  V+   H    R++ VGI+C  F  IMY SPL+I  KVIKTKSVEYMPFFLSL  F N
Sbjct:   117 ILGVLLSAHTHKKRSMIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLN 176

Query:   178 GAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKSTPKK--GSGDVIKPNEVQLS 235
             G  WTAY LI+FD ++ + NGLG + GAIQLI+Y CYY++TPKK   + DV  P+ +   
Sbjct:   177 GVCWTAYALIRFDIYVTIPNGLGAIFGAIQLILYACYYRTTPKKTKAAKDVEMPSVISGP 236

Query:   236 GA 237
             GA
Sbjct:   237 GA 238




GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0051119 "sugar transmembrane transporter activity" evidence=ISS
UNIPROTKB|A2WSD8 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q8LR09 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A2WSD3 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
TAIR|locus:505006381 SWEET4 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123426 SWEET7 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A2YZ24 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q0J349 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2173782 SWEET8 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170748 AtVEX1 "VEGETATIVE CELL EXPRESSED1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8W0K2SWT6B_ORYSJNo assigned EC number0.55410.97910.9251yesno
A2WSD8SWT6A_ORYSINo assigned EC number0.56590.95830.8880N/Ano
A2WSD3SWT6B_ORYSINo assigned EC number0.550.97910.9251N/Ano
Q8LBF7SWET7_ARATHNo assigned EC number0.52600.94580.8798yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_Genewise1_v1.C_LG_I2590
hypothetical protein (243 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 2e-27
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 3e-19
>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information
 Score =  100 bits (251), Expect = 2e-27
 Identities = 39/85 (45%), Positives = 57/85 (67%)

Query: 134 FVGIICDIFNIIMYASPLSIWHKVIKTKSVEYMPFFLSLANFANGAVWTAYGLIKFDKFI 193
            +G++C +F++ ++ SPLSI  KVIKTKSVE MPF   LA   + ++W  YGL+K D +I
Sbjct: 2   LLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGYI 61

Query: 194 VVSNGLGTVLGAIQLIIYGCYYKST 218
           ++ NG+G VLG I LI++  Y    
Sbjct: 62  IIPNGVGCVLGTIYLILFIIYPPKK 86


This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 240
KOG1623243 consensus Multitransmembrane protein [General func 100.0
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.88
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.84
KOG1623 243 consensus Multitransmembrane protein [General func 99.54
COG409589 Uncharacterized conserved protein [Function unknow 99.34
TIGR00951220 2A43 Lysosomal Cystine Transporter. 99.31
COG409589 Uncharacterized conserved protein [Function unknow 99.22
KOG3211230 consensus Predicted endoplasmic reticulum membrane 98.98
PF0419361 PQ-loop: PQ loop repeat 98.39
PF0419361 PQ-loop: PQ loop repeat 98.15
KOG2913260 consensus Predicted membrane protein [Function unk 97.87
PRK01021 608 lpxB lipid-A-disaccharide synthase; Reviewed 96.79
smart0067932 CTNS Repeated motif present between transmembrane 96.42
PHA02246192 hypothetical protein 96.31
TIGR00951 220 2A43 Lysosomal Cystine Transporter. 96.28
smart0067932 CTNS Repeated motif present between transmembrane 95.47
KOG2489592 consensus Transmembrane protein [General function 91.7
KOG3211230 consensus Predicted endoplasmic reticulum membrane 90.64
KOG1589118 consensus Uncharacterized conserved protein [Funct 90.08
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 89.97
PHA02246192 hypothetical protein 88.99
KOG2913 260 consensus Predicted membrane protein [Function unk 85.48
KOG3145372 consensus Cystine transporter Cystinosin [Amino ac 83.63
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 82.3
PF0757872 LAB_N: Lipid A Biosynthesis N-terminal domain; Int 82.18
COG3952113 Predicted membrane protein [Function unknown] 80.7
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=9.2e-46  Score=315.45  Aligned_cols=209  Identities=45%  Similarity=0.818  Sum_probs=186.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHhhccccCCCceEEeehhHHHHHHH
Q 043313            5 EAARNIVGIIGNVISFGLFLSPTPTFWRIIKRKDTEEFHPYAYICACMNCMFWILYGLPVVHPDSTLVVTINGVGLALEL   84 (240)
Q Consensus         5 ~~~~~i~~~l~~~~t~~~~~splp~i~~i~k~kst~~~s~~pf~~~~~n~~~Wl~YG~~~l~~d~~~li~~N~~g~~~~~   84 (240)
                      +....+++.+|.++|++++++|+|+++||+|+||+|+.|+.||+++.+||++|+.||  ..++|+..++.+|.+|+.++.
T Consensus         3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG--~~~~~d~llitIN~~G~~ie~   80 (243)
T KOG1623|consen    3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYG--LLKVHDYLLITINGIGLVIET   80 (243)
T ss_pred             chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhh--hhccCceEEEEEehhcHHHHH
Confidence            456789999999999999999999999999999999999999999999999999999  566634999999999999999


Q ss_pred             HHHHHHHhhccCchhhHHHHHHHHHHHHHHHHHHhhhhhhccCCceehhhhhhHHHHHHHHHHhhhHHHHHHHHhcCCCC
Q 043313           85 IYLSIFCVYNRQKKGRKIVAIGLLGEVAFLGVIAVITFVVFHNTNTRTLFVGIICDIFNIIMYASPLSIWHKVIKTKSVE  164 (240)
Q Consensus        85 ~y~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~i~~~~Spl~~i~~v~k~kst~  164 (240)
                      .|+..|+.|+++|+ +.+.  .......++.....+++...++++.+.+.+|.+|++.+++||+|||..+++++|+||+|
T Consensus        81 ~Yi~~f~~ya~~k~-~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE  157 (243)
T KOG1623|consen   81 VYISIFLYYAPKKK-TVKI--VLALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVE  157 (243)
T ss_pred             HHHHHHheecCchh-eeEe--eehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCcee
Confidence            99999999998887 2211  22222333444444556667888888999999999999999999999999999999999


Q ss_pred             ccchHHHHHHHHhhHHHhhhhccccCeeEEeehHHHHHHHHHHHhheeeeeCCC
Q 043313          165 YMPFFLSLANFANGAVWTAYGLIKFDKFIVVSNGLGTVLGAIQLIIYGCYYKST  218 (240)
Q Consensus       165 ~l~~~~~~~~~~~~~~W~~YG~l~~d~~i~~~N~~G~~l~~~~l~l~~~y~~~~  218 (240)
                      .||++++++.++++..|++||++++|.+|.+||.+|..+++.|+.+|+.||+++
T Consensus       158 ~mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~  211 (243)
T KOG1623|consen  158 YMPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTT  211 (243)
T ss_pred             eechHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCc
Confidence            999999999999999999999999999999999999999999999999998766



>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>KOG2913 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>KOG2489 consensus Transmembrane protein [General function prediction only] Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>KOG1589 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information
>KOG2913 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism] Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>PF07578 LAB_N: Lipid A Biosynthesis N-terminal domain; InterPro: IPR011499 This domain is found at the N terminus of a group of Chlamydial lipid A biosynthesis proteins Back     alignment and domain information
>COG3952 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00