Citrus Sinensis ID: 043373

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------81
Protein Sequence
MISNQTRIRPSPLPTSSATRQLAHSPLLLRRVRAAGFTPRTDFSCKLSHGHESYNFPEKIIATTRKRGIRPPNIKQSEVAGAAAGAGEDEEEEEEKKESGEPVEDRLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVLESGGVESNKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVREIRESLVKLKESTEKEKKKINKDSVEGSRDGETVKIKKILKRWGLSEKDMKPALELVDGLSEGSRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLNNLK
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHcccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccHHccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHEEEccccccHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHHHHHHcHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccHHHHHHcccHHHHHHHHHccccccccccEEcccccccccccHHHHHHccccccccccccccHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEcccEEEccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccccEcccccccHHHHHHHHHHHccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccEEHHHHHHHHHHcHHHHHcccccccccHHHHHEEEEHHHHHHEEEcHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHEEEEEEEccHHHHHcccHHHHHHHHEEEEEEcccccEEcccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcHHHHcccccHHHHHHHHHHHEEcccccEEEEHcccccHHHHHHHHHHHHHHHHccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
misnqtrirpsplptssatrqlahsplLLRRVraagftprtdfscklshghesynfpeKIIATTrkrgirppnikqsevagaaagagedeeeeeekkesgepvedRLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEwnsggedgkigeLVEGLSREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVlesggvesnKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVkvddgiskeELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVREIRESLVKLKESTEKEKKKINkdsvegsrdgeTVKIKKILKrwglsekdmkPALELVdglsegsrvnSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYAsmkmcppktaafKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVvvkddgdlscfrpsnyslSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGkilkrsdsddhhkASAHLywdlsaptlwcshgpapppvwvttRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFnnkdlskfesdinaHYSVTTSAIINNFIQvinpgpitaavgtglsCIPFLVLLVSNIAMVFKgfhndddyvVASVHFFWGLYGLFICLIKTFGDAILLLNNLK
Flexible Loop (DISEMBL)
misnqtrirpsplptssatrqlahspLLLRRVRAAGFTPRTDFscklshghesynfpEKIIATtrkrgirppnikqsevagaaagagedeeeeeekkesgepvedrlseeeKKKIcefagrlseeekIRIFEIlmglseeekRKLSEIVeewnsggedgkigelveglsregkRKLCgvlkdlsdgdkEKITElleglnekqtkKLIELVESLSEEGLKRVGKHvlesggvesnkafELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVREIRESLvklkestekekkkinkdsvegsrdgetvkikkilkrwglsekdmkPALElvdglsegsrvnSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLNNLK
Low Complexity Region (SEG)
MISNQTRIRPSPLPTSSATRQLAHSPLLLRRVRAAGFTPRTDFSCKLSHGHESYNFPEKIIATTRKRGIRPPNIKQsevagaaagagedeeeeeekkesgepvedRLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVLESGGVESNKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVREIReslvklkestekekkkinkdsveGSRDGETVKIKKILKRWGLSEKDMKPALELVDGLSEGSRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLNNLK
Disordered region (IsUnstruct)
**************************LLLRRVRAAGFTPRTDFSCKLSHGHESYNFPEKIIA*****************************************************CEFAGRLSEEEKIRIFEILMGL*************************************KLCGVLK************************LIELVE******LKRVGKHVLESGGVESNKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVR***********************************IKKILKRWGL*******************************EEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKR********ASAHLYWDLSAPTLWC********VWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLN***
Disordered Region (DISOPRED)
*********************LAHSPLLLRRVRAAGFTPRTDFSCKLSHGHESYNFPEKIIATTRKRG**********************************************ICEFAGRLSEEEKIRI*********************************************************************************************************************************VAIFKILLCLREIVKVDDGISK**********************************************************************KKIL***********************************************LANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLNNL*
Disordered Region (DISEMBL)
*********************LAHSPLLLRRVRAAGFTPRTDFSCKLSHGHESYNFPEKIIATTRKRGIRPPNIKQ**********************************EKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVLESGGVESNKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVREIRESLVKLKE*******************GETVKIKKILKRWGLSEKDMKPALELVDGLSEGSRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLNNLK
Disordered Region (DISPRO)
************LPTSS**********LLRRVRAAGFTPRTDFSCKLSHGHESYNFPEKIIATTRKRGIRPPNIKQ************************EPVEDRLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVLESGGVESNKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVREIRESLVKLKESTEKEKKKINKDSVEGSRDGETVKIKKILKRWGLSEKDMKPALELVDGLSEGSRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLNNLK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MISNQTRIRPSPLPTSSATRQLAHSPLLLRRVRAAGFTPRTDFSCKLSHGHESYNFPEKIIATTRKRGIRPPNIKQSEVAGAAAGAGEDEEEEEEKKESGEPVEDRLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGLSREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVLESGGVESNKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSVEGSRDGETVKIKKILKRWGLSEKDMKPALELVDGLSEGSRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHIANSNGLIMLGVLISTLALFLLQISLDYALMVFNNKDLSKFESDINAHYSVTTSAIINNFIQVINPGPITAAVGTGLSCIPFLVLLVSNIAMVFKGFHNDDDYVVASVHFFWGLYGLFICLIKTFGDAILLLNNLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	809	2.2.26 [Sep-21-2011]
Q94A20	256	BI1-like protein OS=Arabi	yes	no	0.239	0.757	0.297	3e-08

>sp|Q94A20|BI1L_ARATH BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1

 Score = 61.2 bits (147), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 8/202 (3%)

Query: 426 RLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKE 485
           R  FI+KV   L   LL   +  A + + PP       +    L   L ++P    +   
Sbjct: 46  RWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSPGILL--FLCIVPFILIWPLH 103

Query: 486 ISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEV 545
           I  QK+     L++ A+ T    F    + A + GRI+L AL+ TL ++   SL A    
Sbjct: 104 IYHQKH--PVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVG--SLTAYTFW 159

Query: 546 VVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIF-NRGPLITAIDAGLGVLVFTMFALYDAG 604
             K   D S   P  ++ S+ I  + SF+Q+F   GP   A+  G   LVF  + +YD  
Sbjct: 160 AAKKGKDFSFLGPILFT-SLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTD 218

Query: 605 KILKRSDSDDHHKASAHLYWDL 626
            ++KR   D++  AS  LY D+
Sbjct: 219 NLIKRFTYDEYILASVALYLDI 240

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	809
116788998	245	unknown [Picea sitchensis]	0.244	0.808	0.288	7e-07
297804704	256	hypothetical protein ARALYDRAFT_493344 [	0.239	0.757	0.301	9e-07
18414455	256	BI1-like protein [Arabidopsis thaliana]	0.239	0.757	0.297	2e-06
449454436	244	PREDICTED: BI1-like protein-like [Cucumi	0.145	0.483	0.328	7e-06
226499752	264	transmembrane BAX inhibitor motif-contai	0.133	0.409	0.383	1e-05
195622594	264	transmembrane BAX inhibitor motif-contai	0.133	0.409	0.375	2e-05
226533228	264	transmembrane BAX inhibitor motif-contai	0.133	0.409	0.375	2e-05
357133759	293	PREDICTED: BI1-like protein-like [Brachy	0.231	0.638	0.296	2e-05
168008685	248	predicted protein [Physcomitrella patens	0.238	0.778	0.280	3e-05
392578991	277	hypothetical protein TREMEDRAFT_41527 [T	0.227	0.664	0.259	3e-05

>gi|116788998|gb|ABK25077.1| unknown [Picea sitchensis]

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 10/208 (4%)

Query: 421 QNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLS-PILFLIPTC 479
           Q+   RL F+KKV   L + LL  ++  A++ +  P T    +     L   IL LI  C
Sbjct: 31  QDNEMRLGFLKKVYSILSMQLLLTVIVAATVVLYTPATLFLVKTPGLLLGISILPLILMC 90

Query: 480 KAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSL 539
             +          +  GL    +    G+     + A + G I+L AL+ T  ++F ++ 
Sbjct: 91  PLYAYHQKHPVNLALLGLFTVVLSLTVGI-----SCAYTKGIIVLEALILTAAVVFSLT- 144

Query: 540 GAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIF-NRGPLITAIDAGLGVLVFTMF 598
           G  F    K   D S   P  +S S+ +  L  F+Q+F   G L T I  GL  L+F+ +
Sbjct: 145 GYTFWAA-KKGKDFSFLGPILFS-SLLVIILFGFIQVFFPLGSLSTTIYGGLAALIFSGY 202

Query: 599 ALYDAGKILKRSDSDDHHKASAHLYWDL 626
            +YD   ++KR   D +  AS  LY D+
Sbjct: 203 IVYDTDNLIKRYTYDQYIWASVVLYLDI 230

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804704|ref|XP_002870236.1| hypothetical protein ARALYDRAFT_493344 [Arabidopsis lyrata subsp. lyrata] gi|297316072|gb|EFH46495.1| hypothetical protein ARALYDRAFT_493344 [Arabidopsis lyrata subsp. lyrata]

 Score = 62.4 bits (150), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 8/202 (3%)

Query: 426 RLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKE 485
           R  FI+KV   L   LL   +  A + + PP       +    L   L ++P    +   
Sbjct: 46  RWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDVLTGSPGILL--FLCIVPFILIWPLH 103

Query: 486 ISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEV 545
           I  QK+     L++ A+ T    F    + A + GRI+L AL+ TL ++   SL A    
Sbjct: 104 IYHQKH--PVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVG--SLTAYTFW 159

Query: 546 VVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIF-NRGPLITAIDAGLGVLVFTMFALYDAG 604
             K   D S   P  ++ S+ I  + SF+Q+F   GP   AI  G+  LVF  + +YD  
Sbjct: 160 AAKKGKDFSFLGPILFT-SLIILVVTSFIQMFFPLGPTSIAIYGGISALVFCGYIVYDTD 218

Query: 605 KILKRSDSDDHHKASAHLYWDL 626
            ++KR   D++  AS  LY D+
Sbjct: 219 NLIKRFTYDEYILASVALYLDI 240

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414455|ref|NP_567466.1| BI1-like protein [Arabidopsis thaliana] gi|75164899|sp|Q94A20.1|BI1L_ARATH RecName: Full=BI1-like protein gi|15215827|gb|AAK91458.1| AT4g15470/dl3775w [Arabidopsis thaliana] gi|20453267|gb|AAM19872.1| AT4g15470/dl3775w [Arabidopsis thaliana] gi|332658207|gb|AEE83607.1| BI1-like protein [Arabidopsis thaliana]

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 8/202 (3%)

Query: 426 RLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKE 485
           R  FI+KV   L   LL   +  A + + PP       +    L   L ++P    +   
Sbjct: 46  RWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSPGILL--FLCIVPFILIWPLH 103

Query: 486 ISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEV 545
           I  QK+     L++ A+ T    F    + A + GRI+L AL+ TL ++   SL A    
Sbjct: 104 IYHQKH--PVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVG--SLTAYTFW 159

Query: 546 VVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIF-NRGPLITAIDAGLGVLVFTMFALYDAG 604
             K   D S   P  ++ S+ I  + SF+Q+F   GP   A+  G   LVF  + +YD  
Sbjct: 160 AAKKGKDFSFLGPILFT-SLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTD 218

Query: 605 KILKRSDSDDHHKASAHLYWDL 626
            ++KR   D++  AS  LY D+
Sbjct: 219 NLIKRFTYDEYILASVALYLDI 240

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454436|ref|XP_004144961.1| PREDICTED: BI1-like protein-like [Cucumis sativus] gi|449471847|ref|XP_004153426.1| PREDICTED: BI1-like protein-like [Cucumis sativus] gi|449523593|ref|XP_004168808.1| PREDICTED: BI1-like protein-like [Cucumis sativus]

 Score = 59.3 bits (142), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 10/128 (7%)

Query: 506 FGVFWADRNL------ANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPS 559
            G+F A  +L      AN++GRI+L AL+ T  ++  ++ G  F    K   D S   P 
Sbjct: 104 LGIFTATLSLTVGVSCANTDGRIVLEALILTSAVVSSLT-GYTFWAS-KKGKDFSYLGPF 161

Query: 560 NYSLSMTIAFLVSFLQ-IFNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKA 618
            ++ ++ I  L SF+Q  F  GP  TA+  G+G ++F+ + +YD   ++KR   DD+  A
Sbjct: 162 LFT-ALMILLLTSFIQAFFPLGPTSTAVYGGIGAIIFSGYIIYDTDNLIKRFTYDDYIWA 220

Query: 619 SAHLYWDL 626
           +  LY D+
Sbjct: 221 AITLYLDI 228

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226499752|ref|NP_001149877.1| transmembrane BAX inhibitor motif-containing protein 4 [Zea mays] gi|195635205|gb|ACG37071.1| transmembrane BAX inhibitor motif-containing protein 4 [Zea mays] gi|195636862|gb|ACG37899.1| transmembrane BAX inhibitor motif-containing protein 4 [Zea mays] gi|223949897|gb|ACN29032.1| unknown [Zea mays] gi|413945290|gb|AFW77939.1| transmembrane BAX inhibitor motif protein-containing protein 4 [Zea mays]

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 516 ANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQ 575
           AN+ G+I+L AL+ T  ++  VSL A      K   +     P   S ++TI  L SFLQ
Sbjct: 138 ANTQGKIVLEALVLTAGVV--VSLTAYAFWASKKGKEFGYLGPI-LSSALTILVLTSFLQ 194

Query: 576 IF-NRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDL 626
           +F   GP+   +  GLG LVF+ F LYD   ++KR   D++  AS  LY D+
Sbjct: 195 VFFPLGPVSVGLFGGLGALVFSGFILYDTENLIKRHTYDEYIWASVGLYLDI 246

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195622594|gb|ACG33127.1| transmembrane BAX inhibitor motif-containing protein 4 [Zea mays]

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 516 ANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQ 575
           AN+ G+I+L AL+ T  ++  VSL A      K   +     P   S ++TI  L SFLQ
Sbjct: 138 ANTQGKIVLEALVLTAGVV--VSLTAYAFWASKKGKEFGYLGPI-LSSALTILVLTSFLQ 194

Query: 576 IF-NRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDL 626
           +F   GP+   +  GLG LVF+ F LYD   +++R   D++  AS  LY D+
Sbjct: 195 VFFPLGPVSVGLFGGLGALVFSGFILYDTENLIRRHTYDEYIWASVGLYLDI 246

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226533228|ref|NP_001149641.1| transmembrane BAX inhibitor motif-containing protein 4 [Zea mays] gi|195628760|gb|ACG36210.1| transmembrane BAX inhibitor motif-containing protein 4 [Zea mays]

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 4/112 (3%)

Query: 516 ANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQ 575
           AN+ G+I+L AL+ T  ++  VSL A      K   +     P   S ++TI  L SFLQ
Sbjct: 138 ANTQGKIVLEALVLTAGVV--VSLTAYAFWASKKGKEFGYLGPI-LSSALTILVLTSFLQ 194

Query: 576 IF-NRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDL 626
           +F   GP+   +  GLG LVF+ F LYD   +++R   D++  AS  LY D+
Sbjct: 195 VFFPLGPVSVGLFGGLGALVFSGFILYDTENLIRRHTYDEYIWASVGLYLDI 246

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357133759|ref|XP_003568491.1| PREDICTED: BI1-like protein-like [Brachypodium distachyon]

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 88/209 (42%), Gaps = 22/209 (10%)

Query: 426 RLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKE 485
           R  FI+KV   L   LL   +  A   + P   A          SP+L L+     F   
Sbjct: 83  RWGFIRKVYGILCAQLLLTTIVSAVTVLHPTLNATLSS------SPVLALVLAVLPFVLM 136

Query: 486 ISKQKYDST-------AGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVS 538
           I    Y           GL    +  + GV       AN+ G I+L AL+ T  ++   S
Sbjct: 137 IPLYHYQHRHPHNFVFLGLFTLCLSFSIGV-----ACANTEGTIVLEALVLTSAVV--AS 189

Query: 539 LGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIF-NRGPLITAIDAGLGVLVFTM 597
           L A      K   +     P  +S ++TI  + SF+QIF   GP   A+  G G LVF+ 
Sbjct: 190 LTAYTFWASKKGKEFGYLGPFLFS-ALTILVVTSFIQIFFPFGPASNAVIGGFGALVFSG 248

Query: 598 FALYDAGKILKRSDSDDHHKASAHLYWDL 626
           F +YD   ++KR   D++  AS  LY D+
Sbjct: 249 FIVYDTENLIKRHTYDEYIWASVGLYLDI 277

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|168008685|ref|XP_001757037.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691908|gb|EDQ78268.1| predicted protein [Physcomitrella patens subsp. patens]

 Score = 57.8 bits (138), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 10/203 (4%)

Query: 426 RLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQN-YTHFLSPILFLIPTCKAFKK 484
           R  FI+KV   L V +L   V  A +   PP    F  N +   L+    LI  C  +  
Sbjct: 37  RWGFIRKVYGILSVQVLLTTVISAFVVSTPPVVEFFLSNIWVLLLTSFAPLILMCPLYYY 96

Query: 485 EISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFE 544
                      GL  + +    G+     + A + G I+L ALL T  ++  +SL A   
Sbjct: 97  HQQHPVNLVLLGLFTATISLTVGI-----SSALTKGYIVLEALLLTAAVV--LSLTAYTH 149

Query: 545 VVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQ-IFNRGPLITAIDAGLGVLVFTMFALYDA 603
              +   D S   P  ++ S+ I  L   +Q  F  GP+   I  GL  L+F+ + +YD 
Sbjct: 150 WASRKGHDFSFLGPILFA-SLVILVLFGLIQAFFPLGPVSHMIYGGLSALIFSTYIVYDT 208

Query: 604 GKILKRSDSDDHHKASAHLYWDL 626
             ++KR   D++  AS  LY D+
Sbjct: 209 DNLIKRYSYDEYIWASVALYLDI 231

Source: Physcomitrella patens subsp. patens

Species: Physcomitrella patens

Genus: Physcomitrella

Family: Funariaceae

Order: Funariales

Class: Bryopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|392578991|gb|EIW72118.1| hypothetical protein TREMEDRAFT_41527 [Tremella mesenterica DSM 1558]

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 24/208 (11%)

Query: 426 RLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKK- 484
           R  F++KV   L + LL+  +  A +++  P   AF Q++     P +  IP   +F   
Sbjct: 70  RRAFVRKVYSILSIQLLATAIVSAVLRL--PAAVAFHQDH-----PWMIYIPMLGSFAAL 122

Query: 485 -EISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVF 543
             +  +++   A L++  + T F        ++  + +I+L AL  TL +   ++L    
Sbjct: 123 GGVYWKRHQHPANLILLGLFTMFEAMLVGTVVSYYDSKIVLQALFITLGVFAGLTL---- 178

Query: 544 EVVVKDDGDLSCFRPSNYS--LSMTIAFLVSFLQIFNRGPLITAIDAGLG---VLVFTMF 598
               +   D S F P  ++  + +  A LVS    F+       +D G+    VL+F+ F
Sbjct: 179 -FTFQTKFDFSSFGPFLFAGIMGLLTASLVSIFLPFDAN-----LDLGIACFSVLLFSGF 232

Query: 599 ALYDAGKILKRSDSDDHHKASAHLYWDL 626
            LYD  +ILKR   D++  A+  LY D+
Sbjct: 233 VLYDTQQILKRFSVDEYCIATLTLYLDV 260

Source: Tremella mesenterica DSM 1558

Species: Tremella mesenterica

Genus: Tremella

Family: Tremellaceae

Order: Tremellales

Class: Tremellomycetes

Phylum: Basidiomycota

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	809
TAIR|locus:2130190	256	AT4G15470 "AT4G15470" [Arabido	0.239	0.757	0.297	8.9e-09
UNIPROTKB|Q8IIG7	1070	PF11_0207 "Uncharacterized pro	0.252	0.190	0.252	0.00019
TAIR|locus:2130170	235	AT4G14730 "AT4G14730" [Arabido	0.249	0.859	0.232	0.00024
TAIR|locus:2077309	239	BIL4 "AT3G63310" [Arabidopsis	0.244	0.828	0.231	0.00033

TAIR|locus:2130190 AT4G15470 "AT4G15470" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 8.9e-09, P = 8.9e-09
 Identities = 60/202 (29%), Positives = 92/202 (45%)

Query:   426 RLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKE 485
             R  FI+KV   L   LL   +  A + + PP       +    L   L ++P    +   
Sbjct:    46 RWGFIRKVYGILSAQLLLTTLISAVVVLNPPVNDLLTGSPGILL--FLCIVPFILIWPLH 103

Query:   486 ISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEV 545
             I  QK+     L++ A+ T    F    + A + GRI+L AL+ TL ++   SL A    
Sbjct:   104 IYHQKHP--VNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVG--SLTAYTFW 159

Query:   546 VVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIF-NRGPLITAIDAGLGVLVFTMFALYDAG 604
               K   D S   P  ++ S+ I  + SF+Q+F   GP   A+  G   LVF  + +YD  
Sbjct:   160 AAKKGKDFSFLGPILFT-SLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTD 218

Query:   605 KILKRSDSDDHHKASAHLYWDL 626
              ++KR   D++  AS  LY D+
Sbjct:   219 NLIKRFTYDEYILASVALYLDI 240

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0016197 "endosomal transport" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

UNIPROTKB|Q8IIG7 PF11_0207 "Uncharacterized protein PF11_0207" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 130 (50.8 bits), Expect = 0.00019, P = 0.00019
 Identities = 53/210 (25%), Positives = 103/210 (49%)

Query:   109 EEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGEDGKIGELVEGL 168
             +E K++I E    + EE K  I E+   + EE K ++ E+ EE     E+  I E+ E +
Sbjct:   505 KEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEVKEE--IKEVKEEI 562

Query:   169 SREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVLES 228
              +E K ++   +K++ +  KE+I E ++ + E+  +++ E ++ + EE +K V + + E 
Sbjct:   563 -KEVKEEIKEEIKEVKEEIKEEIKEEIKEVKEEIKEEVKEEIKEVKEE-IKEVKEEIKEE 620

Query:   229 GGVESNKAFELLL-IDGLIKEDRKRVRNFACSVAIFKILLCLREIVK-VDDGISKEELVT 286
                E  +  E +  +   IKE+ K V+         +I   ++EI + + + IS E    
Sbjct:   621 VKEEIKEVKEEIKEVKEEIKEEIKEVKEEIKEEVKEEIKEEIKEIKEELKNDISSETTKE 680

Query:   287 DIRHFWEGENNTIAKFLKSLEVEYQDEVRE 316
             +     + E     KF+    + YQ E++E
Sbjct:   681 EKNTEHKKEETEKKKFIPKRVIMYQQELKE 710

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=NAS

GO:0016020 "membrane" evidence=NAS

TAIR|locus:2130170 AT4G14730 "AT4G14730" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
 Identities = 49/211 (23%), Positives = 98/211 (46%)

Query:   418 KASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHF-LSPILFLI 476
             K S  L  R  FI+K+   L + LL  +   A +    P      + +    +  ++ L+
Sbjct:    19 KESSEL--RWAFIRKLYSILSLQLLVTVGVSAVVYFVRPIPEFITETHRGLAVFFVILLL 76

Query:   477 PTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFH 536
             P    +     ++K+      +V ++ T    F      + S GRI+L A + T  ++F 
Sbjct:    77 PLLLLWPLLAFEKKHPINC--IVLSIFTLSISFSVGICCSLSQGRIVLEAAILTAVMVFG 134

Query:   537 VSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNR-GPLITAIDAGLGVLVF 595
             +++   +   VK   D S   P  +  ++ I  + + LQIF+  G L + I +G+  +VF
Sbjct:   135 LTIYTFW--AVKRGHDFSFLGPFLFG-ALLIILVFTLLQIFHPLGKLSSMIFSGIASIVF 191

Query:   596 TMFALYDAGKILKRSDSDDHHKASAHLYWDL 626
               + ++D  +++K+ + D++  A+  LY D+
Sbjct:   192 CGYIIFDTNQLIKKLNYDEYITAAIRLYLDV 222

GO:0016595 "glutamate binding" evidence=ISS

TAIR|locus:2077309 BIL4 "AT3G63310" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
 Identities = 48/207 (23%), Positives = 89/207 (42%)

Query:   424 SPRLE--FIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHF-LSPILFLIPTCK 480
             SP L   FI+KV   + + LL  I   A++      +  F      F L  +L L P   
Sbjct:    22 SPELRWSFIRKVYSIISIQLLVTIAVAATVVKVHSISVFFTTTTAGFALYILLILTPLIV 81

Query:   481 AFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLG 540
                     QK+      L+  + T    F      A ++G+++L +++ T  ++  ++L 
Sbjct:    82 MCPLYYYHQKHP--VNYLLLGIFTVALAFAVGLTCAFTSGKVILESVILTAVVVISLTLY 139

Query:   541 AVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQI-FNRGPLITAIDAGLGVLVFTMFA 599
               +    K   D +   P  +  ++ +  + SF+QI F  G +   I   L  ++F  + 
Sbjct:   140 TFW--AAKRGHDFNFLGPFLFG-AVIVLMVFSFIQILFPLGKISVMIYGCLASIIFCGYI 196

Query:   600 LYDAGKILKRSDSDDHHKASAHLYWDL 626
             +YD   ++KR   D++  A+  LY D+
Sbjct:   197 VYDTDNLIKRHSYDEYIWAAVSLYLDV 223


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      809       757   0.00091  121 3  11 22  0.38    34
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  622 (66 KB)
  Total size of DFA:  353 KB (2176 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  67.85u 0.10s 67.95t   Elapsed:  00:00:04
  Total cpu time:  67.85u 0.10s 67.95t   Elapsed:  00:00:04
  Start:  Mon May 20 22:45:06 2013   End:  Mon May 20 22:45:10 2013

GO:0016595 "glutamate binding" evidence=ISS

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IEP;IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	809
pfam01027	205	pfam01027, Bax1-I, Inhibitor of apoptosis-promotin	2e-07
cd10429	233	cd10429, GAAP_like, Golgi antiapoptotic protein	2e-07
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-04
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.001
COG5124	209	COG5124, COG5124, Protein predicted to be involved	0.001
COG0670	233	COG0670, COG0670, Integral membrane protein, inter	0.001
PRK03918	880	PRK03918, PRK03918, chromosome segregation protein	0.002

>gnl|CDD|216251 pfam01027, Bax1-I, Inhibitor of apoptosis-promoting Bax1

 Score = 52.2 bits (126), Expect = 2e-07
 Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 429 FIKKVSVHLGVHL-LSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEIS 487
           F++KV   L + L L+  VAY  +         F      ++  +L L      F     
Sbjct: 3   FLRKVYGLLALGLLLTAAVAYLVLSTPALLQLLF---PLFWVGLLLPLALLIFVFLLFSR 59

Query: 488 KQKYDSTAGLLVSAVHTAF-GVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVV 546
            +K  S+A L +  + T   G+      L  + G I+L A L T   +F   L       
Sbjct: 60  IKKKSSSAALALLFLFTLLEGLTLGPILLVYTAGSIILQAFLGTA-AIF-GGLSLY---A 114

Query: 547 VKDDGDLSCFRPSNYSLSMTIAFLV-SFLQIFNRGPLITAIDAGLGVLVFTMFALYDAGK 605
           +    DLS      +  +  I  +V S + IF     ++   + +GVL+F+   LYD  +
Sbjct: 115 LTTKRDLSFLGG--FLFAGLIGLIVASLVNIFLPSSALSLAISAIGVLIFSGLILYDTQR 172

Query: 606 ILKRSDSDDHH-KASAHLYWDL 626
           I +  ++DD++  A+  LY D 
Sbjct: 173 IKEGGETDDYYILAALSLYLDF 194

Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak). Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress. BI-1 appears to exert its effect through an interaction with calmodulin. Length = 205

>gnl|CDD|198411 cd10429, GAAP_like, Golgi antiapoptotic protein

 Score = 52.2 bits (126), Expect = 2e-07
 Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 21/213 (9%)

Query: 419 ASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQN----YTHFLSPILF 474
           AS     R+ F++KV   L V LL+     A   + P      + +        +  ++ 
Sbjct: 20  ASAEPEIRMAFLRKVYSILSVQLLATTAVSALFYLSPSIKTFVQSHPWLFLISLIGSLIL 79

Query: 475 LIPTCKAFKKEISKQKYDSTAGLLVSA--VHTAFGVFWADRNLANSNGRIMLAALLTTLY 532
           LI     +K+            +L+S   +  A+ V      ++  +G+I+L AL+ TL 
Sbjct: 80  LIAL--YWKRHSHPVNL-----ILLSLFTLCEAYTVGLV---VSFYDGKIVLQALILTLG 129

Query: 533 ILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPLITAIDAGLGV 592
           +   ++    +    K D   S F    + L   +  L    Q F   P    + AGLG 
Sbjct: 130 VFVGLTA---YTFQTKRDF--SSFGALLFILLWALILLALIFQFFPYSPTFELVYAGLGA 184

Query: 593 LVFTMFALYDAGKILKRSDSDDHHKASAHLYWD 625
           L+F+ + +YD   I+KR   D++  A+  LY D
Sbjct: 185 LLFSGYIVYDTQLIMKRLSPDEYILAAISLYLD 217

GAAP (or transmembrane BAX inhibitor motif containing 4) is a regulator of apoptosis that is related to the BAX inhibitor (BI)-1 like family of small transmembrane proteins, which have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well-characterized oncogene, or by inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Human GAAP has been linked to the modulation of intracellular fluxes of Ca(2+), by suppressing influx from the extracellular medium and reducing release from intracellular stores. A viral homolog (vaccinia virus vGAAP) acts similar to its human counterpart in inhibiting apoptosis. Length = 233

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 45.9 bits (108), Expect = 1e-04
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 74   IKQSEVAGAAAGAGEDEEEEEEKKESGEPVEDRLSEEEKKKICEFAGRLSEEEKIRIFEI 133
            +K++E       A E ++ EE+KK++ E    + +EE++KK  E   +  E E+ +  E 
Sbjct: 1652 LKKAEEENKIKAAEEAKKAEEDKKKAEEA---KKAEEDEKKAAEALKK--EAEEAKKAEE 1706

Query: 134  LMGLSEEEKRKLSEIVEEWNSGGEDGKI-GELVEGLSREGKRKLCGVLKDLSDGDKEKIT 192
            L     EEK+K  E+ +      E+ KI  E  +  + E K+K     KD  + +K+KI 
Sbjct: 1707 LKKKEAEEKKKAEELKKA----EEENKIKAEEAKKEAEEDKKKAEEAKKD--EEEKKKIA 1760

Query: 193  ELLEGLNEKQTKKLIELVESLSEEGLKR 220
              L+   EK+ +++ +  E++ EE L  
Sbjct: 1761 H-LKKEEEKKAEEIRKEKEAVIEEELDE 1787

Length = 2084

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 42.4 bits (99), Expect = 0.001
 Identities = 70/300 (23%), Positives = 113/300 (37%), Gaps = 44/300 (14%)

Query: 58   EKIIATTRKRGIRPPNIKQSEVAGAAAGAGEDEEEEEEKKESGEPVEDRLSEEEKKKICE 117
            E  I    K       +K  E   A     + EE ++ ++E  +  + +  E E+KK  E
Sbjct: 1591 EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650

Query: 118  FAGRLSEEEKIRIFEILMGLSEEEKRKLSEI----------VEEWNSGGEDGKIGELVEG 167
               +  EE KI+  E     +EE+K+K  E            E      E+ K  E ++ 
Sbjct: 1651 ELKKAEEENKIKAAE-EAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKK 1709

Query: 168  LSREGKRKLCGVLKDLSDGDKEKITELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVL- 226
               E K+K    LK   + +K K  E  +    ++ KK  E  E+  +E  K+   H+  
Sbjct: 1710 KEAEEKKK-AEELKKAEEENKIKAEEAKK--EAEEDKKKAE--EAKKDEEEKKKIAHLKK 1764

Query: 227  --ESGGVESNKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLCLREIVKVDDGISKEEL 284
              E    E  K  E ++ + L +ED KR                     K+ D       
Sbjct: 1765 EEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVD---------------KKIKDIFDNFAN 1809

Query: 285  VTDIRHFWEG--ENNTIAKFLKSLEVEYQDEVREIRESLVKLKESTEKEKKKINKDSVEG 342
            +       EG  E N +    K +E     EV + +    +L+E+   EK K NK++  G
Sbjct: 1810 II------EGGKEGNLVINDSKEMEDSAIKEVADSKNM--QLEEADAFEKHKFNKNNENG 1861

Length = 2084

>gnl|CDD|227453 COG5124, COG5124, Protein predicted to be involved in meiotic recombination [Cell division and chromosome partitioning / General function prediction only]

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 28/141 (19%), Positives = 66/141 (46%), Gaps = 4/141 (2%)

Query: 265 ILLCLREIVK--VDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVREIRESLV 322
           +L+ ++++++  VDDG+   E       +W  ++ T+ K   S E   + +++E+++ + 
Sbjct: 41  VLMTVKDLLQQLVDDGVVSVEKCGTSNIYWSFKSQTLQKLYDSSE-LLKKKIQEVKQDIA 99

Query: 323 KLKESTEKEKKKINKDSVEGSRDGETVKIKKILKRWGLSEKDMKPALELVDGLS-EGSRV 381
             KE  +KEK    K   EG ++     + +  K+     K    +L+ ++ +  + +++
Sbjct: 100 TYKEEIDKEKATRRKKFTEGQKNYNREALLEKRKKEQDEIKKKLNSLQKIEPIRWDAAKI 159

Query: 382 NSRKFLESLEEEATKILTLKD 402
             +K    L +    I  L D
Sbjct: 160 QEKKKKVHLNKTTDNIEILID 180

Length = 209

>gnl|CDD|223742 COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only]

 Score = 40.8 bits (96), Expect = 0.001
 Identities = 50/210 (23%), Positives = 68/210 (32%), Gaps = 29/210 (13%)

Query: 429 FIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISK 488
           F++KV + L + LL   V  A              +   F   +L +      F      
Sbjct: 23  FLRKVYLLLALGLLVTAVGAALAAYLLFNLGLLSLSPPGF---VLIIAGLAGVFFLSRKI 79

Query: 489 QKYDSTAGLLVSAV-----HTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVF 543
            K   TA +L          T   +       A S G  + AA   T  +   +SL    
Sbjct: 80  NKSSPTALILFFVYTALVGLTLSPILLVY--AAISGGDAIAAAFGITALVFGALSLYGYT 137

Query: 544 EVVVKDDGDLSCFRPSNYSLSMT-----IAFLVS-FLQIFNRGPLITAIDAGLGVLVFTM 597
                   DLS        L M      IA LV+ FL       L  AI + LGVL+F+ 
Sbjct: 138 TK-----RDLSSLGSF---LFMALIGLIIASLVNIFLGS---SALHLAI-SVLGVLIFSG 185

Query: 598 FALYDAGKILKRSDSDDHHKASA-HLYWDL 626
              YD   I +    +      A  LY D 
Sbjct: 186 LIAYDTQNIKRMEGGERLAIMGALSLYLDF 215

Length = 233

>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional

 Score = 41.6 bits (98), Expect = 0.002
 Identities = 79/350 (22%), Positives = 140/350 (40%), Gaps = 61/350 (17%)

Query: 90  EEEEEEKKESGEPVEDRLSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIV 149
           ++ +E +K   E  E     EE K   E   RL +       E L    EE ++   EI 
Sbjct: 345 KKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIE 404

Query: 150 EEWNS-----GGEDGKIGELVEGLSR----EGKRKLCGVLKDLSDGDKEKITELLEGLNE 200
           EE +      G    +I EL + +      +GK  +CG  ++L++  ++           
Sbjct: 405 EEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCG--RELTEEHRK----------- 451

Query: 201 KQTKKLIELVESLSEEGLKRVGKHVLESGGVESNKAFELLLIDGLIKEDRKRVRNFACSV 260
                  EL+E  + E LKR+ K + E    E     EL  ++ ++K++ + ++      
Sbjct: 452 -------ELLEEYTAE-LKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKL----- 498

Query: 261 AIFKILLCLREIVKVDDGISKEELVTDIRHF---------WEGENNTIAKFLKSLEVEYQ 311
              ++   L+E+ +     + EEL      +          +GE  ++ K L+ LE E +
Sbjct: 499 --KELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE-ELK 555

Query: 312 DEVREIRESLVKLKESTEKEKKKINKDSVEGSRDGETVKIKKILKRWGLSEKDMKPALEL 371
            ++ E+ +   KL E  E+  + + +    G    E ++     +R    E      LEL
Sbjct: 556 KKLAELEK---KLDELEEELAELLKELEELGFESVEELE-----ERLKELEPFYNEYLEL 607

Query: 372 VDGLSEGSRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQ 421
            D   E  R      L+ LEEE  K    ++LA     K LE+  K+  +
Sbjct: 608 KDAEKELEREEKE--LKKLEEELDKA--FEELAE--TEKRLEELRKELEE 651

Length = 880

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	809
KOG2322	237	consensus N-methyl-D-aspartate receptor glutamate-	100.0
PRK10447	219	HflBKC-binding inner membrane protein; Provisional	100.0
cd06181	212	BI-1-like BAX inhibitor (BI)-1 like protein family	100.0
COG0670	233	Integral membrane protein, interacts with FtsH [Ge	100.0
PF01027	205	Bax1-I: Inhibitor of apoptosis-promoting Bax1; Int	100.0
KOG1630	336	consensus Growth hormone-induced protein and relat	99.96
KOG1629	235	consensus Bax-mediated apoptosis inhibitor TEGT/BI	99.91
PF12811	274	BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539	98.25
COG4760	276	Predicted membrane protein [Function unknown]	95.8

>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-41  Score=337.81  Aligned_cols=199  Identities=23%  Similarity=0.315  Sum_probs=181.2

Q ss_pred             hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhHHHHHHHHHHHHHhhh-hchhhhhcccchhhHH
Q 043373          419 ASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKA-FKKEISKQKYDSTAGL  497 (809)
Q Consensus       419 as~~~sIR~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpWL~IvsLILLIaL~~a-fsk~i~RRK~PsNAgL  497 (809)
                      +++++++|++|+||||+++++||++|++++++++++++++.|+.+|+|..++.++..+..+.. .|+...|||+|.|  +
T Consensus        37 ~~~~~~iR~~FiRKVYsIl~~QLl~T~~~~~~~~~~~~~~~~v~~~~~~~~~~~~vf~vt~l~l~c~~~~r~k~P~N--~  114 (237)
T KOG2322|consen   37 AFCDQSIRWGFIRKVYSILSIQLLITLAVVAIFTVHEPVQDFVRRNPALYWALIVVFIVTYLSLACCEGLRRKSPVN--L  114 (237)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHheeEEEEccHHHHHHHhCcHHHHHHHHHHHHHHHHHHccCcccccCcHH--H
Confidence            678899999999999999999999999999999999999999999998655555554444332 3567789999999  9


Q ss_pred             HHHHHHHHHHHHHHhHHhhccChhHHHHHHHHHHHHHHHhhhhhhhheecccCccccCCchHHHHHHHHHHHHHHH-HHH
Q 043373          498 LVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSF-LQI  576 (809)
Q Consensus       498 ILL~LFT~~mGvTLG~I~afYdpsIVI~AFlITAaIF~~ISLTaYAffA~QTKrDFT~LGGfLFmLGLIgLIIASL-INI  576 (809)
                      ++|++||+++++++|..+++|++.+|++|+.+|++++  +|+++|++   |||+|||.+|+++++ .+++++++|+ ..+
T Consensus       115 ilL~iFT~a~s~~~g~~~a~~~~~~VL~Al~IT~~V~--~slt~~t~---qtK~DFt~~~~~l~~-~l~vl~~~g~I~~~  188 (237)
T KOG2322|consen  115 ILLGIFTLAEAFMTGLVTAFYDAKVVLLALIITTVVV--LSLTLFTL---QTKYDFTSLGGFLFA-LLIVLLLFGLIFLF  188 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhe--eeEEEEEE---eeccchhhhhhHHHH-HHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999  99997765   889999999999999 8899999994 455


Q ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHH
Q 043373          577 FNRGPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWD  625 (809)
Q Consensus       577 F~~S~lLsLIIS~LGVLVFSGYIAYDTQrIIkrySpDDYI~AALSLYLD  625 (809)
                      |+.+++++++|+++|+++|++|++||||++|++++|||||+||++||+|
T Consensus       189 f~~~~~~~~vya~lgAllf~~yl~~Dtqllm~~~SPEEYI~aA~~lYlD  237 (237)
T KOG2322|consen  189 FPYGPILVMVYAALGALLFCGYLVYDTQLLMGRISPEEYIFAALNLYLD  237 (237)
T ss_pred             HhhHHHHHHHHHHHHHHHHhHHHHhhhHHHhccCCHHHHHHHHHHhhcC
Confidence            6899999999999999999999999999999999999999999999998

>PRK10447 HflBKC-binding inner membrane protein; Provisional

Probab=100.00  E-value=4.9e-38  Score=313.88  Aligned_cols=191  Identities=13%  Similarity=0.116  Sum_probs=162.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhH-HHHHHHHHHHHHhhhhchhhhhcccchhhHHHHHHHH
Q 043373          425 PRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYT-HFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVH  503 (809)
Q Consensus       425 IR~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpW-L~IvsLILLIaL~~afsk~i~RRK~PsNAgLILL~LF  503 (809)
                      .+++|+||||++++++++.|++++++.++.+.    ...+.+ .+++.+++++..+       .++++|.|  ++++++|
T Consensus        16 ~~~~~Lr~vY~lLa~tl~~aa~ga~v~~~~~~----~~~~~~~~~~~~~gl~~~~~-------~~~~~~~~--~~llf~f   82 (219)
T PRK10447         16 STHKVLRNTYFLLSLTLAFSAITATASTVLML----PSPGLILTLVGMYGLMFLTY-------KTANKPTG--ILSAFAF   82 (219)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----chhHHHHHHHHHHHHHHHHH-------HHHcCCHH--HHHHHHH
Confidence            47899999999999999999999987653211    000111 1233333333222       24678988  9999999


Q ss_pred             HHHHHHHHhHHhhcc----ChhHHHHHHHHHHHHHHHhhhhhhhheecccCccccCCchHHHHHHHHHHHHHHHHHHhcc
Q 043373          504 TAFGVFWADRNLANS----NGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNR  579 (809)
Q Consensus       504 T~~mGvTLG~I~afY----dpsIVI~AFlITAaIF~~ISLTaYAffA~QTKrDFT~LGGfLFmLGLIgLIIASLINIF~~  579 (809)
                      |+++|+++|+++.+|    ++.+|++|+++|+++|  +++++|++   +||+||+++|++|++ +++++++++++|+|++
T Consensus        83 T~~~G~~lg~i~~~y~~~~~~~iV~~A~~~Ta~iF--~~ls~~a~---~tk~Dfs~lg~~L~~-~l~~li~~~l~~~F~~  156 (219)
T PRK10447         83 TGFLGYILGPILNTYLSAGMGDVIALALGGTALVF--FCCSAYVL---TTRKDMSFLGGMLMA-GIVVVLIGMVANIFLQ  156 (219)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH--HHHHHHHH---HHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHc
Confidence            999999999999876    4689999999999999  89998875   899999999999999 9999999999999988


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHHHHHHHHhc
Q 043373          580 GPLITAIDAGLGVLVFTMFALYDAGKILKRSDSDDHHKASAHLYWDLSAPTLWCSH  635 (809)
Q Consensus       580 S~lLsLIIS~LGVLVFSGYIAYDTQrIIkrySpDDYI~AALSLYLDFINLFLyIL~  635 (809)
                      ++.++++++++|+++||+|++||||+|+++ .+||||.||++||+||||||+++|+
T Consensus       157 s~~~~~~~s~~g~llfsgyilyDTq~Ii~~-g~~dyi~aAl~LYlDiinlFl~lL~  211 (219)
T PRK10447        157 LPALHLAISAVFILISSGAILFETSNIIHG-GETNYIRATVSLYVSLYNIFVSLLS  211 (219)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999975 6899999999999999999999987

>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family

Probab=100.00  E-value=2.6e-36  Score=292.14  Aligned_cols=199  Identities=22%  Similarity=0.208  Sum_probs=172.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhHHH----HHHHHHHHHHhhhhchhhhhcccchhhHHHHH
Q 043373          425 PRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHF----LSPILFLIPTCKAFKKEISKQKYDSTAGLLVS  500 (809)
Q Consensus       425 IR~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpWL~----IvsLILLIaL~~afsk~i~RRK~PsNAgLILL  500 (809)
                      .|++|+||||++|++|+++|+++++...+.++.+. +..++|..    ++++++.+.+++   .+..++++|.|  ++++
T Consensus         1 ~~~~fl~kVY~~l~~~l~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~--~~ll   74 (212)
T cd06181           1 IRRGFLRKVYGLLALQLLVTALVAYLGMFSPPLRN-VLSNTPLGWLLLLAFLGLVILLFC---CRIKRRSSPAN--LILL   74 (212)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHhccHHHHHHHHHHHHHHHHHHH---HHHhccCHHHH--HHHH
Confidence            37899999999999999999999999888887766 33344322    233333333332   35567788988  9999


Q ss_pred             HHHHHHHHHHHhHHhhccChhHHHHHHHHHHHHHHHhhhhhhhheecccCccccCCchHHHHHHHHHHHHHHHHHHhcch
Q 043373          501 AVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRG  580 (809)
Q Consensus       501 ~LFT~~mGvTLG~I~afYdpsIVI~AFlITAaIF~~ISLTaYAffA~QTKrDFT~LGGfLFmLGLIgLIIASLINIF~~S  580 (809)
                      ++||+++|+++++++.++++..|.+|+++|+++|  +++++|++   +||+|++++|+++++ +++++++.+++++|.++
T Consensus        75 ~~ft~~~g~~l~~~~~~~~~~~i~~A~~~T~~if--~~l~l~a~---~tk~d~~~~g~~l~~-~~~~l~~~~l~~~f~~~  148 (212)
T cd06181          75 FLFTALMGVTLGPILSVYTAASVLQAFGITAAVF--GGLSLYAL---TTKRDFSFLGGFLFM-GLIVLIVASLVNIFLQS  148 (212)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH--HHHHHHHH---hccccHHhHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999  88887766   799999999999999 99999999999999888


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CCchhHHHHHHHHHHHHHHHHHHhc
Q 043373          581 PLITAIDAGLGVLVFTMFALYDAGKILKRS----DSDDHHKASAHLYWDLSAPTLWCSH  635 (809)
Q Consensus       581 ~lLsLIIS~LGVLVFSGYIAYDTQrIIkry----SpDDYI~AALSLYLDFINLFLyIL~  635 (809)
                      +..+++++++|+++|++|++||||+|+++.    ++|||+.||++||+|++|+|+++|+
T Consensus       149 ~~~~~~~~~~g~~lf~~~l~~Dtq~i~~~~~~~~~~~d~i~~al~LylDiinlF~~iL~  207 (212)
T cd06181         149 PALQLAISALGVLLFSGYILYDTQLIIGGYRLYLSPDDYILAALSLYLDIINLFLSLLR  207 (212)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998764    4899999999999999999999986

Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.

>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]

Probab=100.00  E-value=3.5e-34  Score=288.16  Aligned_cols=199  Identities=18%  Similarity=0.103  Sum_probs=164.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhH----HHHHHHHHHHHHhhhhchhhhhcccchhhHHH
Q 043373          423 LSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYT----HFLSPILFLIPTCKAFKKEISKQKYDSTAGLL  498 (809)
Q Consensus       423 ~sIR~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpW----L~IvsLILLIaL~~afsk~i~RRK~PsNAgLI  498 (809)
                      +..+++|++|||.+|+++|++|+++++...+.++..+.. .+++    +.++++..++...    .+ .+++.|.+  +.
T Consensus        17 ~~~~~~f~~~vY~~~~~~L~~t~~~a~~~~~~~~~~~~~-~~~~~~~vl~~a~l~~~~~~~----~~-~~~s~~~~--~~   88 (233)
T COG0670          17 DLGLNTFLRKVYLLLALGLLVTAVGAALAAYLLFNLGLL-SLSPPGFVLIIAGLAGVFFLS----RK-INKSSPTA--LI   88 (233)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccccHHHHHHHHHHHHHHHHH----HH-hccCcchH--HH
Confidence            468889999999999999999999988765544433321 2222    2222333222221    11 12255655  89


Q ss_pred             HHHHHHHHHHHHHhHHhhccChhH----HHHHHHHHHHHHHHhhhhhhhheecccCccccCCchHHHHHHHHHHHHHHHH
Q 043373          499 VSAVHTAFGVFWADRNLANSNGRI----MLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFL  574 (809)
Q Consensus       499 LL~LFT~~mGvTLG~I~afYdpsI----VI~AFlITAaIF~~ISLTaYAffA~QTKrDFT~LGGfLFmLGLIgLIIASLI  574 (809)
                      ++++||.++|++++++..+|.+..    |.+||++|+++|  +++++|++   +||+|++++|+++++ +++++++++++
T Consensus        89 ~~~~~t~l~G~tL~~i~~~Y~~~~~~~~i~~af~~t~~~F--~~ls~~g~---~tk~Dls~l~~~l~~-aligLiiasvv  162 (233)
T COG0670          89 LFFVYTALVGLTLSPILLVYAAISGGDAIAAAFGITALVF--GALSLYGY---TTKRDLSSLGSFLFM-ALIGLIIASLV  162 (233)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHH--HHHHHHHH---HHhhhHHHHHHHHHH-HHHHHHHHHHH
Confidence            999999999999999998886655    999999999999  88888776   799999999999999 99999999999


Q ss_pred             HHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHHHHHHHHHHHHhc
Q 043373          575 QIFNRGPLITAIDAGLGVLVFTMFALYDAGKILKR-SDSDDHHKASAHLYWDLSAPTLWCSH  635 (809)
Q Consensus       575 NIF~~S~lLsLIIS~LGVLVFSGYIAYDTQrIIkr-ySpDDYI~AALSLYLDFINLFLyIL~  635 (809)
                      |+|.+|+.++++||++|+++|++|++||||+|+++ ..++.++.+|++||+||||+|+++|+
T Consensus       163 n~Fl~s~~l~~~IS~lgvlifsgli~yDtq~I~~~~~~~~~~i~~AlsLYldfiNlF~~LL~  224 (233)
T COG0670         163 NIFLGSSALHLAISVLGVLIFSGLIAYDTQNIKRMEGGERLAIMGALSLYLDFINLFLSLLR  224 (233)
T ss_pred             HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999985 57788999999999999999999964

>PF01027 Bax1-I: Inhibitor of apoptosis-promoting Bax1; InterPro: IPR006214 Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak) []

Probab=100.00  E-value=1.1e-31  Score=254.83  Aligned_cols=197  Identities=18%  Similarity=0.244  Sum_probs=162.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhH----HHHHHHHHHHHHhhhhchhhhhcccchhhHHHHHHH
Q 043373          427 LEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYT----HFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAV  502 (809)
Q Consensus       427 ~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpW----L~IvsLILLIaL~~afsk~i~RRK~PsNAgLILL~L  502 (809)
                      ++|++|||.++++|+++|++.++.....|   .+...++|    ..+++++..+..++   ....++++|.+.++.++.+
T Consensus         1 ~~fl~kvy~~l~~~l~it~~~~~~~~~~~---~~~~~~~~~~~~~~i~~l~~~i~~~~---~~~~~~~~~~~~~~~~~~~   74 (205)
T PF01027_consen    1 RQFLRKVYGLLALQLAITALGAFLVLASP---LFLSQHFPLSWVSLIVSLVLLIFLYI---LFNRRRRFPSNVALILLFI   74 (205)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHhccHHHHHHHHHHHHHHHHHHH---HHHHHhhhhhhHHHHHHHH
Confidence            48999999999999999977777665555   33333333    23334444322222   1222344565555899999


Q ss_pred             HHHHHHHHHhHHhhccChhHHHHHHHHHHHHHHHhhhhhhhheecccCccccCCchHHHHHHHHHHHHHHHHHHhcchhH
Q 043373          503 HTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIFNRGPL  582 (809)
Q Consensus       503 FT~~mGvTLG~I~afYdpsIVI~AFlITAaIF~~ISLTaYAffA~QTKrDFT~LGGfLFmLGLIgLIIASLINIF~~S~l  582 (809)
                      ||+.+|+++++++.++++.++.+|+++|+++|  ++++++++   +||+|++.+++++++ +++++++++++++|.+++.
T Consensus        75 ~t~~~g~~~~~i~~~~~~~~v~~a~~~T~~if--~~l~~~a~---~~~~d~~~~~~~l~~-~l~~l~i~~l~~~f~~~~~  148 (205)
T PF01027_consen   75 FTLLEGLLLGPISSFYDPSIVLQAFLLTAAIF--IALTLYAF---FTKRDFTRWGGILFI-GLIGLIIFGLVSIFLPSSP  148 (205)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH---HHhhhhcccchHHHH-HHHHHHHHHHHHHHhcchH
Confidence            99999999999999999999999999999999  89998776   789999999999999 9999999999999977889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCchh-HHHHHHHHHHHHHHHHHHhc
Q 043373          583 ITAIDAGLGVLVFTMFALYDAGKILK-RSDSDDH-HKASAHLYWDLSAPTLWCSH  635 (809)
Q Consensus       583 LsLIIS~LGVLVFSGYIAYDTQrIIk-rySpDDY-I~AALSLYLDFINLFLyIL~  635 (809)
                      ...+++++|+++|++|++||||+|++ +.++||| +.+|++||+|++|+|+++|+
T Consensus       149 ~~~~is~~~~~lf~~~l~~Dt~~i~~~~~~~~~~~i~~Al~Ly~d~i~lF~~iL~  203 (205)
T PF01027_consen  149 LYLLISYIGILLFSLYLVYDTQRIIRRYFSPDDYAIIAALSLYLDIINLFLRILR  203 (205)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999986 4567887 99999999999999999986

Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress []. BI-1 appears to exert its effect through an interaction with calmodulin [].

>KOG1630 consensus Growth hormone-induced protein and related proteins [Signal transduction mechanisms]

Probab=99.96  E-value=6.8e-29  Score=253.60  Aligned_cols=270  Identities=15%  Similarity=0.102  Sum_probs=217.1

Q ss_pred             cccCCcchhhHHHHHHhhcccccccCcccccccccccCcccCCchhhhhhHHHhhhhhccccccccccCcchhhh---Hh
Q 043373          341 EGSRDGETVKIKKILKRWGLSEKDMKPALELVDGLSEGSRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKY---IK  417 (809)
Q Consensus       341 ~~~~~~~~~~~~~~~~r~~l~e~~~~Pa~~~~~~~~~g~~~~s~~~~es~~~eat~~~~lk~~a~cf~~~dfsky---I~  417 (809)
                      .+||+-....+++.-|-.+|||+.|.|.+|++|.||+|+.+|.            ++.++  +++|||+.+.+++   +.
T Consensus        37 r~s~~r~r~~v~~~~rgpsLKErllgP~s~k~f~mGk~a~AGa------------a~~Gl--gaLcYYGlgls~e~si~d  102 (336)
T KOG1630|consen   37 RESRVRTRIGVRRGRRGPSLKERLLGPPSEKAFSMGKGAAAGA------------AAVGL--GALCYYGLGLSNEISIID  102 (336)
T ss_pred             chhhhcccccccccCcCccHHHHhcCCCcccchhcchhhhccc------------hhhhh--hHHHHhcccccccchHHH
Confidence            3455666666677777789999999999999999999999999            99999  9999999999888   67


Q ss_pred             hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhH-HHHHHHHHHHHHhhhhchhhhhccc-chhh
Q 043373          418 KASQNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYT-HFLSPILFLIPTCKAFKKEISKQKY-DSTA  495 (809)
Q Consensus       418 ~as~~~sIR~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpW-L~IvsLILLIaL~~afsk~i~RRK~-PsNA  495 (809)
                      ++..||+..++.|..+|..++.++.+|++.+.....++.+.++..+..| ..++.+.+++..-..  .+...... |...
T Consensus       103 ks~iWPqyVrdRI~sTYay~~gS~~lTA~savA~~rs~~lm~l~~rgg~va~~~tla~mi~sG~l--arsi~Yq~g~gaK  180 (336)
T KOG1630|consen  103 KSVIWPQYVRDRIHSTYAYLAGSCGLTAASAVAISRSPALMNLMMRGGWVAIGVTLAAMIGSGML--ARSIEYQPGPGAK  180 (336)
T ss_pred             hccccHHHHHHHHHHHHHHHhccHHHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHhcchh--hhcccCCCCccHH
Confidence            7889999999999999999999999999998888888888888888777 455666666654331  11111111 2222


Q ss_pred             HHHHHHHHHHHHHHHHhHHhhccChhHHHHHHHHHHHHHHHhhhhhhhheecccCccccCCchHHHHHHHHHHHHHHHHH
Q 043373          496 GLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQ  575 (809)
Q Consensus       496 gLILL~LFT~~mGvTLG~I~afYdpsIVI~AFlITAaIF~~ISLTaYAffA~QTKrDFT~LGGfLFmLGLIgLIIASLIN  575 (809)
                       -+.+.+.+..+|..++++|.+- +.++..|.+.|++|+  .+|+..+.+|+.-|  |..+|+.|-+ |+-++++.++.+
T Consensus       181 -hLAW~lHc~vlGAV~APlc~lg-GPiLtrAa~YTaGIV--GgLStvA~cAPSeK--FL~MggPLai-GlGvVFvssl~s  253 (336)
T KOG1630|consen  181 -HLAWLLHCGVLGAVVAPLCFLG-GPILTRAAWYTAGIV--GGLSTVAACAPSEK--FLNMGGPLAI-GLGVVFVSSLGS  253 (336)
T ss_pred             -HHHHHHHHHHHHHHHhhHHhcc-cHHHHHHHHHHcccc--chhhhhhhcCcHHH--HhhcCCCcee-eeeeEehhhhhh
Confidence             3556677888899899888654 558889999999999  89999999888765  8889998888 888889999999


Q ss_pred             Hh-cchh----HHHHHHHHHHHHHHHHHHHHHHHHHhhc------CC--C-chhHHHHHHHHHHHHHHHHHH
Q 043373          576 IF-NRGP----LITAIDAGLGVLVFTMFALYDAGKILKR------SD--S-DDHHKASAHLYWDLSAPTLWC  633 (809)
Q Consensus       576 IF-~~S~----lLsLIIS~LGVLVFSGYIAYDTQrIIkr------yS--p-DDYI~AALSLYLDFINLFLyI  633 (809)
                      || +..+    .+.-+--+.|+++||+|++||||++.++      ++  | -|+|.+++++|+|..|||++|
T Consensus       254 m~LPPtta~GA~LaSmslYGGLiLFS~FLLYDTQr~vk~ae~ypq~s~~~~~dPin~~msiymdvlnifiri  325 (336)
T KOG1630|consen  254 MFLPPTTALGAGLASMSLYGGLILFSGFLLYDTQRVVKSAEKYPQYSEFPNYDPINACMSIYMDVLNIFIRI  325 (336)
T ss_pred             hhcCCchhhhhhhHHHHHhccHHHHHHHHHHhHHHHHHHHHhCcchhccCCCCchHHHHHHHHHHHHHHHHH
Confidence            99 3222    2333445567899999999999999853      11  2 578999999999999999998

>KOG1629 consensus Bax-mediated apoptosis inhibitor TEGT/BI-1 [Defense mechanisms]

Probab=99.91  E-value=7.5e-24  Score=210.82  Aligned_cols=194  Identities=14%  Similarity=0.119  Sum_probs=157.2

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhHHHHHHHHHHHHHhhhhchhhhhcccchhhHHHHH
Q 043373          421 QNLSPRLEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVS  500 (809)
Q Consensus       421 ~~~sIR~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpWL~IvsLILLIaL~~afsk~i~RRK~PsNAgLILL  500 (809)
                      -+|++| +|++|||..++..+++|++.|++-+...      ..+....++.+++++.+.|      ...++..  ++.+|
T Consensus        19 ~sP~vq-~HLkkvY~tl~~~~~asA~GAylhM~~n------igG~lsalg~l~~miwl~~------~py~hk~--rl~lL   83 (235)
T KOG1629|consen   19 ISPAVQ-NHLKKVYLTLALALFASAAGAYLHMVWN------IGGLLSALGSLGLMIWLMF------TPYEHKT--RLGLL   83 (235)
T ss_pred             CCHHHH-HHHHHHHHHHHHHHHHHHhhhHHHhhhh------ccchHHHHHHHHHHHHHhC------CCCccch--hHHHH
Confidence            345555 9999999999999999999988644221      1111134555666666655      1222222  48899


Q ss_pred             HHHHHHHHHHHhHHh---hccChhHHHHHHHHHHHHHHHhhhhhhhheecccCccccCCchHHHHHHHHHHHHHHHHHHh
Q 043373          501 AVHTAFGVFWADRNL---ANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDDGDLSCFRPSNYSLSMTIAFLVSFLQIF  577 (809)
Q Consensus       501 ~LFT~~mGvTLG~I~---afYdpsIVI~AFlITAaIF~~ISLTaYAffA~QTKrDFT~LGGfLFmLGLIgLIIASLINIF  577 (809)
                      ++|+++.|.++||.+   .-.+|+++++||..|+++|  +++++-+++|.  ++.+.++|+.|.+ ++-.+.+.++.|.|
T Consensus        84 ~~fa~l~GasvGP~i~~~ididpsIliTAf~GTav~F--~cfSasAmlAr--rreYLylGg~L~s-~~s~l~wl~l~n~~  158 (235)
T KOG1629|consen   84 FLFAFLTGASVGPLIKFCIDIDPSILITAFVGTAVIF--VCFSASAMLAR--RREYLYLGGLLSS-GLSLLLWLSLANSF  158 (235)
T ss_pred             HHHHHHcCCcccchhhheeccChHHHHHHHHhhHHHH--HHHHHHHHHHh--hhhhhhhhHHHHH-HHHHHHHHHHHHHH
Confidence            999999999999975   3468999999999999999  66666677774  5679999999999 99999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCchhHHHHHHHHHHHHHHHHHHh
Q 043373          578 NRGPLITAIDAGLGVLVFTMFALYDAGKILKR--SDSDDHHKASAHLYWDLSAPTLWCS  634 (809)
Q Consensus       578 ~~S~lLsLIIS~LGVLVFSGYIAYDTQrIIkr--ySpDDYI~AALSLYLDFINLFLyIL  634 (809)
                      +.|.+..-+--++|+++|.||++||||.|+++  ...-||+.+|+.||.||+.+|.+||
T Consensus       159 fgS~~v~~~qLY~Gllvfvg~ivvdTQ~IiEKah~GdmDyv~Hsl~lf~dfvsvF~riL  217 (235)
T KOG1629|consen  159 FGSIWVFKFQLYVGLLVFVGFIVVDTQEIIEKAHHGDMDYVQHSLDLFTDFVSVFRRIL  217 (235)
T ss_pred             hhHHHHHHHHHHHHHHHhheeEEeeHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888899999999999999999999965  4567999999999999999999986

>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human

Probab=98.25  E-value=0.00014  Score=76.84  Aligned_cols=128  Identities=13%  Similarity=-0.036  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHhHHhhccC-------hhHHHHHHHHHHHHHHHhhhh-hhhheecccCcccc-CCchHHHHHHHHHHHHH
Q 043373          501 AVHTAFGVFWADRNLANSN-------GRIMLAALLTTLYILFHVSLG-AVFEVVVKDDGDLS-CFRPSNYSLSMTIAFLV  571 (809)
Q Consensus       501 ~LFT~~mGvTLG~I~afYd-------psIVI~AFlITAaIF~~ISLT-aYAffA~QTKrDFT-~LGGfLFmLGLIgLIIA  571 (809)
                      .+|++++|+.+|.+..++.       |.++.+|.+.|.++|  +++. +|..   . .-.-| .+..+.++ +.++.+++
T Consensus       118 ~~YA~~EG~flG~iS~~f~~~~~~~~pGIv~qAvl~T~~vf--~~ml~lYk~---g-~IrvT~kf~~iv~~-a~~gi~~~  190 (274)
T PF12811_consen  118 PIYAVLEGVFLGGISAVFENIYYSRYPGIVFQAVLGTFGVF--AVMLALYKT---G-IIRVTPKFRRIVMI-ATFGIALF  190 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH--HHHHHHHHh---C-CeeechHHHHHHHH-HHHHHHHH
Confidence            5699999999998754332       779999999999999  4433 3321   1 11222 45555555 66666666


Q ss_pred             HHHHHh---c-----chhHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCCchhH-HHHHHHHHHHHHHHHHHhc
Q 043373          572 SFLQIF---N-----RGPLITAIDAGLGVLVFTMFALYDAGKILK---RSDSDDHH-KASAHLYWDLSAPTLWCSH  635 (809)
Q Consensus       572 SLINIF---~-----~S~lLsLIIS~LGVLVFSGYIAYDTQrIIk---rySpDDYI-~AALSLYLDFINLFLyIL~  635 (809)
                      .++|+.   +     .+..+.+.+|.+++++=+..++.|-+.|-+   +--|+.|= .+|+.|=+.+|=||+.||+
T Consensus       191 ~Lv~~vl~lf~~~l~~~gplgI~~slv~v~iAa~sLllDFd~Ie~~v~~gaPk~~eW~~AfGL~vTLVWLYlEILR  266 (274)
T PF12811_consen  191 YLVNLVLSLFVGSLRDGGPLGIGFSLVVVGIAALSLLLDFDFIEQGVRQGAPKKMEWYAAFGLLVTLVWLYLEILR  266 (274)
T ss_pred             HHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence            666653   1     234677888999999999999999988853   23466664 4899998888888888864

Some members of BI1 family have been proved to play important roles in cell death [, ].

>COG4760 Predicted membrane protein [Function unknown]

Probab=95.80  E-value=0.69  Score=48.73  Aligned_cols=193  Identities=15%  Similarity=0.140  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHhhhHHHHHHHHHHHHHhhhhchhhhhcccchhhHHHHHHHHHHH
Q 043373          427 LEFIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAF  506 (809)
Q Consensus       427 ~gFIRKVYgILALQLLITAAVAal~~fspp~~~FL~~NpWL~IvsLILLIaL~~afsk~i~RRK~PsNAgLILL~LFT~~  506 (809)
                      .+-+.|+=..+++ +++|+++++....+.|...... +....+..++++++..+  .   .++.+|.     .-..|+++
T Consensus        52 ddvvtkTG~tLav-~~vtavvs~~~~lv~p~La~~l-tlvGaiGGlilvLvatF--g---kK~~spa-----i~l~YAv~  119 (276)
T COG4760          52 DDVVTKTGATLAV-LLVTAVVSFFLVLVNPALAMPL-TLVGAIGGLILVLVATF--G---KKQWSPA-----IVLSYAVL  119 (276)
T ss_pred             cchhhhhhHHHHH-HHHHHHHHHHHHhcCHHhcccH-hHHHHhhhHHHHHHHHh--c---cccCChH-----HHHHHHHH
Confidence            4667777766666 4566666665444333221110 00022334444433322  1   1222342     33468999


Q ss_pred             HHHHHhHHh------hccC---hhHHHHHHHHHHHHHHHhhhhhhhhe--ecccCccccCCchHHHHHHHHHHHHHHHH-
Q 043373          507 GVFWADRNL------ANSN---GRIMLAALLTTLYILFHVSLGAVFEV--VVKDDGDLSCFRPSNYSLSMTIAFLVSFL-  574 (809)
Q Consensus       507 mGvTLG~I~------afYd---psIVI~AFlITAaIF~~ISLTaYAff--A~QTKrDFT~LGGfLFmLGLIgLIIASLI-  574 (809)
                      +|+-+|.+.      .+|+   +.+|.+|.+.|.++|  ++|-.. +-  +.+---.|+.+---... |+.+|++.+++ 
T Consensus       120 EGlFlGaiS~lla~ftV~~anaGgligqAvLgT~Gvf--~gML~v-YktGaIkvTpkF~r~v~a~~~-Gvl~L~Lgn~vl  195 (276)
T COG4760         120 EGLFLGAISFLLANFTVYEANAGGLIGQAVLGTFGVF--FGMLVV-YKTGAIKVTPKFTRMVVAATF-GVLVLMLGNFVL  195 (276)
T ss_pred             HHHHHHHHHHHhccceEEeccccceeHHHHHHHHHHH--HHHHHH-HhcCceeecchhHHHHHHHHH-HHHHHHHHHHHH
Confidence            999988764      2332   568899999999999  666422 10  11111235443333333 44555554443 


Q ss_pred             HHh--cchhH------HH--HHHHHHHHHHHHHHHHHHHHH-HhhcCCCch-hHHHHHHHHHHHHHHHHHHhc
Q 043373          575 QIF--NRGPL------IT--AIDAGLGVLVFTMFALYDAGK-ILKRSDSDD-HHKASAHLYWDLSAPTLWCSH  635 (809)
Q Consensus       575 NIF--~~S~l------Ls--LIIS~LGVLVFSGYIAYDTQr-IIkrySpDD-YI~AALSLYLDFINLFLyIL~  635 (809)
                      .||  .++++      +-  .-.-|+|+.-|+..+=||.-. +++...|+- --..|+.|-...+=+|+-||+
T Consensus       196 a~F~Gg~~pllr~gG~~~IiFSLfcigiAAf~fllDFDaad~~vr~GAP~kmaWgvAlGL~VTLVWLY~EiLR  268 (276)
T COG4760         196 AMFVGGGIPLLRSGGPFGIIFSLFCIGIAAFSFLLDFDAADQMVRAGAPEKMAWGVALGLTVTLVWLYLEILR  268 (276)
T ss_pred             HHHhcCCcccccCCCceEeeHHHHHHHHHHHHHHhhhhHHHHHHHcCChhhhHHHHHHhHHHHHHHHHHHHHH
Confidence            355  12221      11  123467788899888888643 233333432 244577777777777776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	809
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 75.7 bits (185), Expect = 4e-14
 Identities = 106/670 (15%), Positives = 204/670 (30%), Gaps = 208/670 (31%)

Query: 103 VEDR----LSEEEKKKICEFAGRLSEEEKIRIFEILMGLSEEEKRKLSEIVEEWNSGGED 158
           V+D     LS+EE   I            +R+F  L         K  E+V+++      
Sbjct: 38  VQDMPKSILSKEEIDHIIMSKDA--VSGTLRLFWTL-------LSKQEEMVQKFVEEVLR 88

Query: 159 GKIGELVEGLSREGKR-------------KLCGVLKDLSDGD---KEKITELLEGLNEKQ 202
                L+  +  E ++             +L    +  +  +    +   +L + L E +
Sbjct: 89  INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR 148

Query: 203 TKKLIELVESLSEEGLKRVGKHVL-----ESGGVESNKAFELLLIDGLIKEDRKRVRNFA 257
             K + +      +G+   GK  +      S  V+    F++  ++         ++N  
Sbjct: 149 PAKNVLI------DGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN---------LKNCN 193

Query: 258 CSVAIFKIL--LCLREIVKVDDGISKEELVTDIRHFWEGENNTIAKFLKSLEVEYQDEVR 315
               + ++L  L  + I    +  S+ +  ++I+         + + LKS         +
Sbjct: 194 SPETVLEMLQKLLYQ-IDP--NWTSRSDHSSNIKLRIHSIQAELRRLLKS---------K 241

Query: 316 EIRESLVKLKESTEKEKKKINKDSVEGSRDGETVKIK-KILKRWGLSEKDMKPALELVDG 374
                L+ L              +V+ ++      +  KIL    L+ +      ++ D 
Sbjct: 242 PYENCLLVL-------------LNVQNAKAWNAFNLSCKIL----LTTRFK----QVTDF 280

Query: 375 LSEG--SRVNSRKFLESLEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPRLEFIKK 432
           LS    + ++      +L  +  K L             L KY+    Q+L PR      
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSL-------------LLKYLDCRPQDL-PR------ 320

Query: 433 VSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYTH-FLSPILFLIPTC-KAFKKEISKQK 490
             V         I+A  S++     T     N+ H     +  +I +     +    ++ 
Sbjct: 321 -EVLTTNPRRLSIIA-ESIRD-GLATW---DNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374

Query: 491 YDSTAGLLVSAVHTAFGVFWADRNLANSNGRIMLAALLTTLYILFHVSLGAVFEVVVKDD 550
           +D               VF    +       I        L +++   + +   VVV   
Sbjct: 375 FDR------------LSVFPPSAH-------IPTI----LLSLIWFDVIKSDVMVVVNKL 411

Query: 551 GDLSCF--RPSNYSLSMTIAFLVSFLQIFNRGPL-ITAIDAGLGVLVFTMFALYDAGKIL 607
              S    +P   ++S+   +L   +++ N   L  + +D             Y    I 
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH------------Y---NIP 456

Query: 608 KRSDSDD---------------HHKASA----------HLYWDLS--------APTLWCS 634
           K  DSDD               HH  +            ++ D            T W +
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNA 516

Query: 635 HGPAPPPVWVTTRY---ISDGVEL--ALFNVAIAAFGVVLADVHIANSNGLIMLGVLIST 689
            G     +     Y   I D       L N AI  F      +     N       LI +
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLVN-AILDF------LPKIEEN-------LICS 562

Query: 690 LALFLLQISL 699
               LL+I+L
Sbjct: 563 KYTDLLRIAL 572

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 71.0 bits (173), Expect = 1e-12
 Identities = 57/374 (15%), Positives = 113/374 (30%), Gaps = 103/374 (27%)

Query: 18  ATRQLAHSPLLLRRVRAAGFTPRT----DFSCKLSHGHESYNFPEKIIATTRKRGI---- 69
            ++   +  L+L  V+      +     + SCK             I+ TTR + +    
Sbjct: 239 KSKPYENCLLVLLNVQ----NAKAWNAFNLSCK-------------ILLTTRFKQVTDFL 281

Query: 70  RPPNIKQSEVAGAAAGAGEDEEEEEEKKESGEPVEDRLSEEEKK----KICEFAGRLSE- 124
                    +   +     DE +    K      +D L  E       ++   A  + + 
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD-LPREVLTTNPRRLSIIAESIRDG 340

Query: 125 ------------EEKIRIFEI-LMGLSEEEKRKLSE---IVEEWNSGGEDGKI------- 161
                       ++   I E  L  L   E RK+ +   +            I       
Sbjct: 341 LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP------PSAHIPTILLSL 394

Query: 162 --GELVEGLSREGKRKLCGVLKDLSDGDKEKIT--------ELLEGLNEKQT--KKLIE- 208
              ++++        KL      L +   ++ T        EL   L  +    + +++ 
Sbjct: 395 IWFDVIKSDVMVVVNKLHK--YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452

Query: 209 --LVESLSEEGLKR----------VGKHVLESGGVESNKAFELLLID-GLIKEDRKRVRN 255
             + ++   + L            +G H+      E    F ++ +D   ++   +++R+
Sbjct: 453 YNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE---QKIRH 509

Query: 256 ----FACSVAIFKILLCLRE----IVKVDDGISKEELVTDIRHFWE--GENNTIAKFLKS 305
               +  S +I   L  L+     I   D     E LV  I  F     EN   +K+   
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDP--KYERLVNAILDFLPKIEENLICSKYTDL 567

Query: 306 LEVEYQDEVREIRE 319
           L +    E   I E
Sbjct: 568 LRIALMAEDEAIFE 581

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.6 bits (138), Expect = 1e-08
 Identities = 62/408 (15%), Positives = 118/408 (28%), Gaps = 115/408 (28%)

Query: 124 EEEKIRIFEILMGLSEEEKRKL--------SEIVEEWNSGGEDGKIGELVEGLSREGKRK 175
              +  +  +L   S+  +  L        ++    +N      KI  L+   +R     
Sbjct: 228 HSIQAELRRLLK--SKPYENCLLVLLNVQNAKAWNAFNLSC---KI--LL--TTRFK--- 275

Query: 176 LCGVLKDLSDGDKEKIT--ELLEGLNEKQTKKLIELVESLSEEGLKRVGKHVLESGGVES 233
              V   LS      I+       L   + K L+        + L R           E 
Sbjct: 276 --QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-----------EV 322

Query: 234 NKAFELLLIDGLIKEDRKRVRNFACSVAIFKILLC--LREIVKVDDGISKEELVTDI--R 289
                  L   +I E    +R+   +   +K + C  L  I++     S   L      +
Sbjct: 323 LTTNPRRL--SIIAE---SIRDGLATWDNWKHVNCDKLTTIIES----SLNVLEPAEYRK 373

Query: 290 HFWE----GENNTI-AKFLKSL--EVEYQDEVREIRESLVKLKESTEKEKKKINKDSVEG 342
            F        +  I    L  +  +V   D V  +   L K           + K   E 
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSD-VMVVVNKLHK--------YSLVEKQPKES 424

Query: 343 S-------------RDGETVKIKKILKRWGLSEK----DMKP----------------AL 369
           +              + E    + I+  + + +     D+ P                 +
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484

Query: 370 ELVDGLSEGSRV--NSRKFLES-LEEEATKILTLKDLANCFLNKDLEKYIKKASQNLSPR 426
           E  + ++    V  + R FLE  +  ++T       + N      L+ Y      N  P+
Sbjct: 485 EHPERMTLFRMVFLDFR-FLEQKIRHDSTAWNASGSILNTLQ--QLKFYKPYICDN-DPK 540

Query: 427 LE--------FIKKVSVHLGVHLLSGIVAYASMKMCPPKTAAFKQNYT 466
            E        F+ K+  +L     + ++  A M       A F++ + 
Sbjct: 541 YERLVNAILDFLPKIEENLICSKYTDLLRIALM---AEDEAIFEEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 4e-05
 Identities = 66/467 (14%), Positives = 122/467 (26%), Gaps = 156/467 (33%)

Query: 301 KFLKSLEVEY-QDEVREIRESLVKLKESTEKEKKKINKDSVEGSRDGETVKIKKILKRWG 359
            F+ + + +  QD  + I          +++E   I            T+++   L    
Sbjct: 28  AFVDNFDCKDVQDMPKSI---------LSKEEIDHIIM---SKDAVSGTLRLFWTLLSKQ 75

Query: 360 LS--EKDMKPALE-----LVDGLSEGSR---VNSRKFLESLEEEATKILTLKDLANCFLN 409
               +K ++  L      L+  +    R   + +R ++E  +                ++
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY---NVS 132

Query: 410 KDLEKY--IKKASQNLSPRLEFIKKVSVH--LGVHLLSGIVAYASMKMCPPKT--AAFKQ 463
           + L+ Y  +++A   L P     K V +   LG    SG            KT  A    
Sbjct: 133 R-LQPYLKLRQALLELRP----AKNVLIDGVLG----SG------------KTWVAL--- 168

Query: 464 NYTHFLSPILFLIPTCKAFKKEISKQKYDSTAGLLVSAVHTAFGVFWADRNLANSNGRIM 523
                          C ++K +    K D             F +FW   NL N N    
Sbjct: 169 -------------DVCLSYKVQ---CKMD-------------FKIFWL--NLKNCNSPET 197

Query: 524 LAALLTTLYILFHVSLGA----------VFEVVVKDDGDLSCFRPSNYSLSMTIAFLV-- 571
           +  +L  L      +  +              +  +   L   +P    L      LV  
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL------LVLL 251

Query: 572 -----SFLQIFNRG--PLITAIDAG----LGVLVFTMFALYDAGKILKRSDSDD------ 614
                     FN     L+T         L     T  +L      L   +         
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL 311

Query: 615 HHKASAHLYWDLSAPTLWCSHGPAPPPVWVTTRYISDGVELALFNVAIAAFGVVLADVHI 674
             +       DL  P    +  P                        ++     + D  +
Sbjct: 312 DCRPQ-----DL--PREVLTTNP----------------------RRLSIIAESIRD-GL 341

Query: 675 ANSNGLIMLGV--LISTLALFLLQISLDYALMVFNNKDLSKFESDIN 719
           A  +    +    L + +   L  +       +F    LS F    +
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF--DRLSVFPPSAH 386

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00