Citrus Sinensis ID: 043402
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 135 | ||||||
| 255572349 | 257 | sur2 hydroxylase/desaturase, putative [R | 1.0 | 0.525 | 0.851 | 2e-64 | |
| 388494176 | 257 | unknown [Lotus japonicus] | 1.0 | 0.525 | 0.844 | 3e-64 | |
| 225463125 | 257 | PREDICTED: sphingoid base hydroxylase 2 | 1.0 | 0.525 | 0.851 | 3e-64 | |
| 359495174 | 258 | PREDICTED: sphingoid base hydroxylase 2 | 1.0 | 0.523 | 0.851 | 4e-64 | |
| 363814537 | 255 | uncharacterized protein LOC100795462 [Gl | 1.0 | 0.529 | 0.829 | 7e-64 | |
| 363814430 | 255 | uncharacterized protein LOC100786675 [Gl | 1.0 | 0.529 | 0.814 | 6e-63 | |
| 224085280 | 257 | predicted protein [Populus trichocarpa] | 1.0 | 0.525 | 0.829 | 6e-62 | |
| 118484855 | 257 | unknown [Populus trichocarpa] | 1.0 | 0.525 | 0.814 | 1e-61 | |
| 224062782 | 257 | predicted protein [Populus trichocarpa] | 1.0 | 0.525 | 0.814 | 1e-61 | |
| 24414098 | 246 | putative Sur2p: syringomycin response pr | 1.0 | 0.548 | 0.814 | 4e-60 |
| >gi|255572349|ref|XP_002527113.1| sur2 hydroxylase/desaturase, putative [Ricinus communis] gi|223533536|gb|EEF35276.1| sur2 hydroxylase/desaturase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/135 (85%), Positives = 124/135 (91%)
Query: 1 FLYRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSRMTTRTAVIFFCFAVI 60
FLYRH+HSQHH+LVVPYAIGALYNHPLEGLLLDT+GGA+SFLVS MT RT VIFFCFAV+
Sbjct: 123 FLYRHVHSQHHKLVVPYAIGALYNHPLEGLLLDTVGGAISFLVSGMTARTGVIFFCFAVV 182
Query: 61 KIVDDHSGLWLPGNIFHLFFQNNITYHDVHHQLQGLKYNYSQPFFSIWDRLLGTHMPYHL 120
K VDDH GLWLPGNIFH+FFQNN YHD+HHQLQG KYNYSQPFFSIWD+LLGTHMPY+L
Sbjct: 183 KTVDDHCGLWLPGNIFHIFFQNNTAYHDIHHQLQGTKYNYSQPFFSIWDKLLGTHMPYNL 242
Query: 121 VKLPEGGFEARLKKD 135
VK EGGFEARL KD
Sbjct: 243 VKRAEGGFEARLMKD 257
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388494176|gb|AFK35154.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|225463125|ref|XP_002265496.1| PREDICTED: sphingoid base hydroxylase 2 isoform 1 [Vitis vinifera] gi|297739349|emb|CBI29339.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359495174|ref|XP_003634932.1| PREDICTED: sphingoid base hydroxylase 2 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|363814537|ref|NP_001242157.1| uncharacterized protein LOC100795462 [Glycine max] gi|255634997|gb|ACU17857.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|363814430|ref|NP_001242851.1| uncharacterized protein LOC100786675 [Glycine max] gi|255640302|gb|ACU20440.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|224085280|ref|XP_002307533.1| predicted protein [Populus trichocarpa] gi|222856982|gb|EEE94529.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|118484855|gb|ABK94294.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224062782|ref|XP_002300888.1| predicted protein [Populus trichocarpa] gi|222842614|gb|EEE80161.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|24414098|dbj|BAC22345.1| putative Sur2p: syringomycin response protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 135 | ||||||
| TAIR|locus:2026756 | 260 | SBH1 "AT1G69640" [Arabidopsis | 1.0 | 0.519 | 0.725 | 7.8e-55 | |
| TAIR|locus:2012512 | 259 | SBH2 "AT1G14290" [Arabidopsis | 0.970 | 0.505 | 0.740 | 1.5e-53 | |
| UNIPROTKB|Q67WK8 | 264 | P0425F05.11 "Acid phosphatase- | 0.970 | 0.496 | 0.709 | 3.5e-52 | |
| POMBASE|SPBC887.15c | 293 | sur2 "sphingosine hydroxylase | 0.859 | 0.395 | 0.543 | 9.5e-34 | |
| ASPGD|ASPL0000060829 | 430 | basA [Emericella nidulans (tax | 0.985 | 0.309 | 0.548 | 1.5e-33 | |
| CGD|CAL0002282 | 342 | SUR2 [Candida albicans (taxid: | 0.866 | 0.342 | 0.538 | 8.5e-33 | |
| SGD|S000002705 | 349 | SUR2 "Sphinganine C4-hydroxyla | 0.844 | 0.326 | 0.517 | 6.2e-30 | |
| UNIPROTKB|F1P3A9 | 296 | SC4MOL "Uncharacterized protei | 0.933 | 0.425 | 0.328 | 4.8e-13 | |
| UNIPROTKB|Q5ZLL6 | 296 | MSMO1 "Methylsterol monooxygen | 0.933 | 0.425 | 0.328 | 4.8e-13 | |
| MGI|MGI:1913484 | 293 | Sc4mol "sterol-C4-methyl oxida | 0.822 | 0.378 | 0.336 | 5e-12 |
| TAIR|locus:2026756 SBH1 "AT1G69640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 98/135 (72%), Positives = 115/135 (85%)
Query: 1 FLYRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSRMTTRTAVIFFCFAVI 60
FLY+HIHSQHHRL+VPYA GALYNHP+EGLLLDT+GGALSFLVS M+ RT++ FF FA I
Sbjct: 122 FLYKHIHSQHHRLIVPYAYGALYNHPVEGLLLDTIGGALSFLVSGMSPRTSIFFFSFATI 181
Query: 61 KIVDDHSGLWLPGNIFHLFFQNNITYHDVHHQLQGLKYNYSQPFFSIWDRLLGTHMPYHL 120
K VDDH GLWLPGN+FH+ F+NN YHD+HHQL G KYN+SQPFF +WDR+LGT+MPY L
Sbjct: 182 KTVDDHCGLWLPGNLFHMVFKNNSAYHDIHHQLYGTKYNFSQPFFVMWDRILGTYMPYSL 241
Query: 121 VKLPEGGFEARLKKD 135
K +GGFEAR K+
Sbjct: 242 EKREDGGFEARPTKE 256
|
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| TAIR|locus:2012512 SBH2 "AT1G14290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q67WK8 P0425F05.11 "Acid phosphatase-like" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| POMBASE|SPBC887.15c sur2 "sphingosine hydroxylase Sur2" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000060829 basA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| CGD|CAL0002282 SUR2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| SGD|S000002705 SUR2 "Sphinganine C4-hydroxylase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P3A9 SC4MOL "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZLL6 MSMO1 "Methylsterol monooxygenase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| MGI|MGI:1913484 Sc4mol "sterol-C4-methyl oxidase-like" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 135 | |||
| COG3000 | 271 | COG3000, ERG3, Sterol desaturase [Lipid metabolism | 8e-16 | |
| pfam04116 | 114 | pfam04116, FA_hydroxylase, Fatty acid hydroxylase | 7e-10 |
| >gnl|CDD|225546 COG3000, ERG3, Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
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Score = 70.9 bits (174), Expect = 8e-16
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 2 LYRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSRMTTRTAVIFFCFAVIK 61
L H HH VP + AL HPLE LLL LG L+ ++ + F F +
Sbjct: 122 LLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFLGLLPLLLLG-LSPVAVALLFIFLLFW 180
Query: 62 IVDDHSGL---WLPGNIFHLFFQNNITYHDVHHQLQGLKYNYSQPFFSIWDRLLGTHMP 117
V HS L G + ++F N +H +HH NY + WDRL GT+ P
Sbjct: 181 AVLIHSNLDLPLPLGWLRYVF--NTPRHHRLHHSKDPYDKNYGV-TLTFWDRLFGTYHP 236
|
Length = 271 |
| >gnl|CDD|217907 pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 135 | |||
| COG3000 | 271 | ERG3 Sterol desaturase [Lipid metabolism] | 99.96 | |
| KOG0874 | 287 | consensus Sphingolipid hydroxylase [Lipid transpor | 99.94 | |
| KOG0873 | 283 | consensus C-4 sterol methyl oxidase [Lipid transpo | 99.93 | |
| PLN02869 | 620 | fatty aldehyde decarbonylase | 99.9 | |
| KOG0872 | 312 | consensus Sterol C5 desaturase [Lipid transport an | 99.89 | |
| PF04116 | 114 | FA_hydroxylase: Fatty acid hydroxylase superfamily | 99.63 | |
| PLN02434 | 237 | fatty acid hydroxylase | 98.3 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.57 | |
| KOG0539 | 240 | consensus Sphingolipid fatty acid hydroxylase [Lip | 95.69 | |
| PF10520 | 178 | Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme | 95.58 | |
| PLN02601 | 303 | beta-carotene hydroxylase | 88.88 |
| >COG3000 ERG3 Sterol desaturase [Lipid metabolism] | Back alignment and domain information |
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Probab=99.96 E-value=9.8e-30 Score=197.44 Aligned_cols=130 Identities=32% Similarity=0.434 Sum_probs=112.9
Q ss_pred hhchhhhhcCCCCCCCcccccccCHHHHHHHHHHHHHHHHhhcCccHHHHHHHHHHHHHHHHHhhCCcccCCCccccc--
Q 043402 2 LYRHIHSQHHRLVVPYAIGALYNHPLEGLLLDTLGGALSFLVSRMTTRTAVIFFCFAVIKIVDDHSGLWLPGNIFHLF-- 79 (135)
Q Consensus 2 ly~~~H~~HH~~~~~~~~~~~~~hp~E~~l~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~Hsg~~~~~~~~~~~-- 79 (135)
+|+++|++||+.+.|+++++.+.||+|.++...+ ..++..++|.++.++.++..+..+..+++|||++.| .+.+++
T Consensus 122 ~~w~~H~~HH~~~~~~~~t~~~~hp~e~ll~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~ 199 (271)
T COG3000 122 LLWAFHKVHHSSEVPDPLTALRFHPLEILLLAFL-GLLPLLLLGLSPVAVALLFIFLLFWAVLIHSNLDLP-LPLGWLRY 199 (271)
T ss_pred HHHHHHHhhcCcccCCchhhhhcChHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHHHHHHHhcCcccc-CCccccee
Confidence 5789999999999999999999999999999774 667778889999999999999999999999999976 433332
Q ss_pred cccCcccccccccCCCCCccCCCCchhHHHhHhCCCCCCccccCCCCCCccccCC
Q 043402 80 FQNNITYHDVHHQLQGLKYNYSQPFFSIWDRLLGTHMPYHLVKLPEGGFEARLKK 134 (135)
Q Consensus 80 ~~~~p~~H~~HH~~~~~~~Nyg~~~~~~wD~lfGT~~~~~~~~~~~~g~~~~~~~ 134 (135)
++++|++|++||++++.++|||. .+++|||+|||+..++++...+.|.+.+.++
T Consensus 200 v~~~p~~H~lHH~~~~~~~Nyg~-~~~~WDrlFGT~~~~~~~~~~~~~~~~~~~~ 253 (271)
T COG3000 200 VFNTPRHHRLHHSKDPYDKNYGV-TLTFWDRLFGTYHPPDEREPDKIGVKAKIAL 253 (271)
T ss_pred eecCchHHHHhccCCCCCCcchh-hhHHHHHHcccCCCCcccCcccccccccccc
Confidence 46799999999999844699996 8999999999999998888888777755544
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| >KOG0874 consensus Sphingolipid hydroxylase [Lipid transport and metabolism] | Back alignment and domain information |
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| >KOG0873 consensus C-4 sterol methyl oxidase [Lipid transport and metabolism] | Back alignment and domain information |
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| >PLN02869 fatty aldehyde decarbonylase | Back alignment and domain information |
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| >KOG0872 consensus Sterol C5 desaturase [Lipid transport and metabolism] | Back alignment and domain information |
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| >PF04116 FA_hydroxylase: Fatty acid hydroxylase superfamily; InterPro: IPR006694 This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases | Back alignment and domain information |
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| >PLN02434 fatty acid hydroxylase | Back alignment and domain information |
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| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
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| >KOG0539 consensus Sphingolipid fatty acid hydroxylase [Lipid transport and metabolism] | Back alignment and domain information |
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| >PF10520 Kua-UEV1_localn: Kua-ubiquitin conjugating enzyme hybrid localisation domain; InterPro: IPR019547 This entry represents part of the transcript of the fusion of two genes, the UEV1 | Back alignment and domain information |
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| >PLN02601 beta-carotene hydroxylase | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00