Citrus Sinensis ID: 043412
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 383 | 2.2.26 [Sep-21-2011] | |||||||
| C7QKE8 | 427 | D-inositol 3-phosphate gl | yes | no | 0.451 | 0.405 | 0.262 | 8e-05 | |
| Q9R9N1 | 340 | Lipopolysaccharide core b | no | no | 0.449 | 0.505 | 0.248 | 0.0007 |
| >sp|C7QKE8|MSHA2_CATAD D-inositol 3-phosphate glycosyltransferase 2 OS=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) GN=mshA2 PE=3 SV=1 | Back alignment and function desciption |
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Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 29/202 (14%)
Query: 126 DFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNM 184
D + TD S +R G DP +V + V + F P G ++
Sbjct: 172 DRLIANTDQEASELVRLYGADPGRVSTVNPGVDLDRFRP-----------GDKRAARESV 220
Query: 185 NTSSKEFVFLSVFKWEYRKGWDVLLKAYLE----EFSKADGVVLYLLTNPYHSG------ 234
V L V + + K DVLL+A E E + + +V+ ++ P SG
Sbjct: 221 GLPPDAAVLLFVGRIQPLKAPDVLLRAAAELIAREPERREKLVVAVVGGPSGSGLAEPTH 280
Query: 235 -----RDFG-NKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVI 288
R G +V FV+ D + D W AAD+ V+PS E +G +EA + G PV+
Sbjct: 281 LHRLARRLGIADVVRFVKPVDQTRLAD-WYRAADIAVVPSYSESFGLVAIEAQACGTPVV 339
Query: 289 ATNWSGPTEYLTEENGYPLLVG 310
A G + + L+ G
Sbjct: 340 AARVGGLATAVADGRSGTLVAG 361
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Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) (taxid: 479433) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 5EC: 0 |
| >sp|Q9R9N1|LPSE_RHIME Lipopolysaccharide core biosynthesis glycosyltransferase LpsE OS=Rhizobium meliloti (strain 1021) GN=lpsE PE=3 SV=1 | Back alignment and function description |
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Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 182 SNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLL------TNPYHSGR 235
+ ++T + V +S+ ++ RKG+ L++A ++ GV L+LL N +
Sbjct: 160 AKLDTPADAPVVMSMGRFVERKGFHTLIEA----VARLPGVYLWLLGDGEERDNLHKLAT 215
Query: 236 DFG-NKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG 294
D G + V F D +P + A DVFV+ S E G ++E+ + G PV++T G
Sbjct: 216 DLGVSGRVRFAGWQDDTRP---FLAAVDVFVMSSSHEPLGNVILESWAQGTPVVSTRSEG 272
Query: 295 PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQ 353
P ++ + ENG + +G RA+ ++V N + ++
Sbjct: 273 PQWFMRDGENGLMVDIGDAEGFA-----------------RAIEQIVADNSLRTRL-AER 314
Query: 354 AREDMIQRFSPETVAGIVTDHIKDILSSK 382
E ++ +FS E +TD +L+SK
Sbjct: 315 GHETLVGQFSREA----ITDAYLQLLASK 339
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Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 383 | ||||||
| 359487013 | 485 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.779 | 0.712 | 1e-167 | |
| 296084453 | 396 | unnamed protein product [Vitis vinifera] | 0.986 | 0.954 | 0.712 | 1e-166 | |
| 224100591 | 401 | predicted protein [Populus trichocarpa] | 0.997 | 0.952 | 0.716 | 1e-162 | |
| 356533864 | 484 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.776 | 0.701 | 1e-161 | |
| 147792542 | 395 | hypothetical protein VITISV_042240 [Viti | 0.950 | 0.921 | 0.715 | 1e-160 | |
| 255551169 | 496 | glycosyltransferase, putative [Ricinus c | 0.997 | 0.770 | 0.674 | 1e-160 | |
| 358346031 | 501 | hypothetical protein MTR_070s0002 [Medic | 0.981 | 0.750 | 0.704 | 1e-159 | |
| 357442811 | 475 | hypothetical protein MTR_1g090540 [Medic | 0.976 | 0.787 | 0.705 | 1e-158 | |
| 297833840 | 490 | glycosyl transferase family 1 protein [A | 0.994 | 0.777 | 0.663 | 1e-157 | |
| 449435172 | 482 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.790 | 0.665 | 1e-155 |
| >gi|359487013|ref|XP_002268345.2| PREDICTED: uncharacterized protein LOC100259997 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/400 (71%), Positives = 327/400 (81%), Gaps = 22/400 (5%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE+WSYIL+L++H+KNPRFKL IE HGDL+S++FWEGLP H++ LA EL
Sbjct: 90 MAPFLSGGGYSSEAWSYILSLHQHMKNPRFKLGIEQHGDLESIEFWEGLPPHIKKLAFEL 149
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
+NTECR NET+V+CHSEPGAWYPPLF T PCPPT GYG+FM IGRTMFETDR++ EHV+
Sbjct: 150 HNTECRMNETIVVCHSEPGAWYPPLFQTFPCPPT-GYGEFMYTIGRTMFETDRLNSEHVR 208
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCN+MDFVWVPT+FHVSTF++SGV+P+KVVKIVQP+ V FFDP+ P DLASIGK VLG
Sbjct: 209 RCNQMDFVWVPTEFHVSTFVKSGVEPSKVVKIVQPIDVSFFDPLKHKPFDLASIGKLVLG 268
Query: 181 LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK 240
+ S +EFV LSVFKWEYRKGWDVLL+AYL+EFS DG+ LYLLTNPYHS DFGNK
Sbjct: 269 RAK---SREEFVLLSVFKWEYRKGWDVLLRAYLKEFSMTDGIALYLLTNPYHSDGDFGNK 325
Query: 241 IVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAMS 282
IV FVED +EKP + WAP AAD FVLPSRGEGWGRPLVEAM+
Sbjct: 326 IVEFVEDCGIEKPPNTWAPIYVIDTHIAQVDLPRVYAAADAFVLPSRGEGWGRPLVEAMA 385
Query: 283 MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
M LPVIATNWSGPTEYLT+EN YPL V RMSEV EG F+GH WAEP VD+L LMR VVS
Sbjct: 386 MSLPVIATNWSGPTEYLTDENSYPLPVDRMSEVMEGAFRGHLWAEPGVDQLGVLMRHVVS 445
Query: 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382
N +EA+ KG++AREDMI RFSPE VAGIVT HI+ IL +K
Sbjct: 446 NPEEARGKGRKAREDMISRFSPEIVAGIVTHHIQYILGNK 485
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296084453|emb|CBI25012.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/400 (71%), Positives = 327/400 (81%), Gaps = 22/400 (5%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE+WSYIL+L++H+KNPRFKL IE HGDL+S++FWEGLP H++ LA EL
Sbjct: 1 MAPFLSGGGYSSEAWSYILSLHQHMKNPRFKLGIEQHGDLESIEFWEGLPPHIKKLAFEL 60
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
+NTECR NET+V+CHSEPGAWYPPLF T PCPPT GYG+FM IGRTMFETDR++ EHV+
Sbjct: 61 HNTECRMNETIVVCHSEPGAWYPPLFQTFPCPPT-GYGEFMYTIGRTMFETDRLNSEHVR 119
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCN+MDFVWVPT+FHVSTF++SGV+P+KVVKIVQP+ V FFDP+ P DLASIGK VLG
Sbjct: 120 RCNQMDFVWVPTEFHVSTFVKSGVEPSKVVKIVQPIDVSFFDPLKHKPFDLASIGKLVLG 179
Query: 181 LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK 240
+ S +EFV LSVFKWEYRKGWDVLL+AYL+EFS DG+ LYLLTNPYHS DFGNK
Sbjct: 180 RAK---SREEFVLLSVFKWEYRKGWDVLLRAYLKEFSMTDGIALYLLTNPYHSDGDFGNK 236
Query: 241 IVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAMS 282
IV FVED +EKP + WAP AAD FVLPSRGEGWGRPLVEAM+
Sbjct: 237 IVEFVEDCGIEKPPNTWAPIYVIDTHIAQVDLPRVYAAADAFVLPSRGEGWGRPLVEAMA 296
Query: 283 MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
M LPVIATNWSGPTEYLT+EN YPL V RMSEV EG F+GH WAEP VD+L LMR VVS
Sbjct: 297 MSLPVIATNWSGPTEYLTDENSYPLPVDRMSEVMEGAFRGHLWAEPGVDQLGVLMRHVVS 356
Query: 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382
N +EA+ KG++AREDMI RFSPE VAGIVT HI+ IL +K
Sbjct: 357 NPEEARGKGRKAREDMISRFSPEIVAGIVTHHIQYILGNK 396
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100591|ref|XP_002311937.1| predicted protein [Populus trichocarpa] gi|222851757|gb|EEE89304.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/402 (71%), Positives = 327/402 (81%), Gaps = 20/402 (4%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSESWSYILALNE++ RFKL+IE HGDL+SL+FWEGLP +NLAV L
Sbjct: 1 MAPFLSGGGYSSESWSYILALNENMNKKRFKLSIEQHGDLESLEFWEGLPQETKNLAVNL 60
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
Y TECR NET+VICHSEPGAWYPPLF T PCPPT GY +F VIGRTMFETDRV+ EHVK
Sbjct: 61 YQTECRVNETIVICHSEPGAWYPPLFQTRPCPPT-GYENFNFVIGRTMFETDRVNAEHVK 119
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCNRMD+VWVPTDFHVSTF++SGVDP+KVVK+VQ V V FFDP+ +P+DL SIG VLG
Sbjct: 120 RCNRMDYVWVPTDFHVSTFVQSGVDPSKVVKVVQAVDVEFFDPLKYEPLDLVSIGNLVLG 179
Query: 181 LSNMNTSSK-EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGN 239
+ SK EFVFLSVFKWEYRKGWDVLLKAYL+EFS+ DGV LYLLTNPYHS RDFGN
Sbjct: 180 SGKKDLDSKMEFVFLSVFKWEYRKGWDVLLKAYLKEFSRIDGVALYLLTNPYHSDRDFGN 239
Query: 240 KIVNFVEDSDLEKPDDGWA------------------PAADVFVLPSRGEGWGRPLVEAM 281
KIV FVED+ +E+P GWA AA FVLPSRGEGWGRPLVEAM
Sbjct: 240 KIVEFVEDTGIEEPVKGWALIYVIDTHIAQVDLPRMYKAAHAFVLPSRGEGWGRPLVEAM 299
Query: 282 SMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341
SM LPVIATNWSGPTEYLTEEN YPLLV RMS+V EGPF+GH WAEPS+DKL+ LMR V+
Sbjct: 300 SMSLPVIATNWSGPTEYLTEENSYPLLVDRMSKVMEGPFEGHLWAEPSIDKLQVLMRHVI 359
Query: 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSKI 383
+NV+EA +G++AREDMI+RFSP V+G+VTD I+++L I
Sbjct: 360 TNVEEANMRGRRAREDMIRRFSPRIVSGVVTDLIENLLDRMI 401
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533864|ref|XP_003535478.1| PREDICTED: uncharacterized protein LOC100818182 [Glycine max] | Back alignment and taxonomy information |
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Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/399 (70%), Positives = 319/399 (79%), Gaps = 23/399 (5%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE WSY+LAL+ H K F+LAIEHHGDL+SL+FWEGLPH M+NLA EL
Sbjct: 91 MAPFLSGGGYSSEGWSYVLALHGHRKMQSFRLAIEHHGDLESLEFWEGLPHDMKNLASEL 150
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
Y +CR NET+VICHSEPGAWYPPLF+T PCPP+ Y DF +VIGRTMFETDRV+ EHV+
Sbjct: 151 YQNQCRMNETIVICHSEPGAWYPPLFETFPCPPS-SYHDFKSVIGRTMFETDRVNDEHVE 209
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCNRMD+VWVPT+FH STF++SGV P+KVVKIVQPV V FFDPV P+DLAS K VLG
Sbjct: 210 RCNRMDYVWVPTEFHKSTFVQSGVHPSKVVKIVQPVDVEFFDPVRYKPLDLASRAKLVLG 269
Query: 181 LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK 240
+ K FVFLSVFKWEYRKGWDVLLK+YL+EFS+ D V LYLLTNPYH+ RDFGNK
Sbjct: 270 ----SGVRKSFVFLSVFKWEYRKGWDVLLKSYLKEFSQDDRVALYLLTNPYHTDRDFGNK 325
Query: 241 IVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAMS 282
I++FVE SD+ +P GWA AAD FVLPSRGEGWGRPLVEAMS
Sbjct: 326 ILDFVESSDMVEPVSGWASVYVIDTHIASREFPRVYRAADAFVLPSRGEGWGRPLVEAMS 385
Query: 283 MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
M LPVIATNWSGPTE+LTE+N YPL V RMSEV EGPFKGH WAEPS DKLR MR V+
Sbjct: 386 MALPVIATNWSGPTEFLTEDNSYPLPVDRMSEVIEGPFKGHLWAEPSEDKLRVFMRQVMD 445
Query: 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381
N+ EA AKG++AR+DMI+RFSPE VA IV DHI++IL+
Sbjct: 446 NLTEATAKGRKARDDMIRRFSPEIVADIVADHIQNILAQ 484
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147792542|emb|CAN61336.1| hypothetical protein VITISV_042240 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/386 (71%), Positives = 315/386 (81%), Gaps = 22/386 (5%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE+WSYIL+L++H+KNPRFKL IE HGDL+S++FWEGLP H++ LA EL
Sbjct: 1 MAPFLSGGGYSSEAWSYILSLHQHMKNPRFKLGIEQHGDLESIEFWEGLPPHIKKLAFEL 60
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
+NTECR NET+V+CHSEPGAWYPPLF T PCPPT GYG+FM IGRTMFETDR++ EHV+
Sbjct: 61 HNTECRMNETIVVCHSEPGAWYPPLFQTFPCPPT-GYGEFMYTIGRTMFETDRLNSEHVR 119
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCN+MDFVWVPT+FHVSTF++SGV+P+KVVKIVQP+ V FFDP+ P DL SIGK VLG
Sbjct: 120 RCNQMDFVWVPTEFHVSTFVKSGVEPSKVVKIVQPIDVSFFDPLKHKPFDLGSIGKLVLG 179
Query: 181 LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK 240
+ M +EFV LSVFKWEYRKGWDVLL+AYL+EFS DGV LYLLTNPYHS DFGNK
Sbjct: 180 RAKM---PEEFVLLSVFKWEYRKGWDVLLRAYLKEFSMIDGVALYLLTNPYHSDGDFGNK 236
Query: 241 IVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAMS 282
IV FVED +EKP + WAP AAD FVLPSRGEGWGRPLVEAM+
Sbjct: 237 IVEFVEDCGIEKPPNTWAPIYVIDTHIAQVDLPRVYAAADAFVLPSRGEGWGRPLVEAMA 296
Query: 283 MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
M LPVIATNWSGPTEYLT+EN YPL V RMSEV EG F+GH WAEP VD+L LMR VVS
Sbjct: 297 MSLPVIATNWSGPTEYLTDENSYPLPVDRMSEVMEGAFRGHLWAEPGVDQLGVLMRHVVS 356
Query: 343 NVDEAKAKGKQAREDMIQRFSPETVA 368
N +EA+ KG++AREDMI RFSPE VA
Sbjct: 357 NPEEARGKGRKAREDMISRFSPEIVA 382
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551169|ref|XP_002516632.1| glycosyltransferase, putative [Ricinus communis] gi|223544234|gb|EEF45756.1| glycosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/402 (67%), Positives = 319/402 (79%), Gaps = 20/402 (4%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE+WSY+LALNEH K P F+L +E HGDL+S++FWEGLP H++ LA L
Sbjct: 96 MAPFLSGGGYSSEAWSYMLALNEHTKVPSFRLKVEQHGDLESIEFWEGLPLHIKQLAFNL 155
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
+ T+CR NET+V+CHSEPGAWYPPLF TLPCPPT GY +M+VIGRTMFETDRV+ EHV+
Sbjct: 156 HETKCRMNETIVLCHSEPGAWYPPLFQTLPCPPT-GYNGYMSVIGRTMFETDRVNVEHVR 214
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCN+MD++WVPT+FHVSTFI+SGVD +KVVKI QP+ V FFDP N P+ L+SIG VLG
Sbjct: 215 RCNQMDYIWVPTEFHVSTFIKSGVDASKVVKIGQPIDVEFFDPTNYTPLHLSSIGDLVLG 274
Query: 181 LSNMNTSSK-EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGN 239
+ K EF+FLSVFKWEYRKGWDVLLKAYL+EFS D V LYLLTNPYHS DFGN
Sbjct: 275 ARKKGSDLKREFIFLSVFKWEYRKGWDVLLKAYLKEFSGIDEVALYLLTNPYHSDSDFGN 334
Query: 240 KIVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAM 281
KI+ F+ S +EKP + W AA+ FVLPSRGEGWGRP+VEAM
Sbjct: 335 KILEFLGTSKIEKPGESWPAIYVIDTHIAQIDLPRMYKAANAFVLPSRGEGWGRPIVEAM 394
Query: 282 SMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341
SM LPVIATNWSGP EYLTEEN YPL V R+SEV EGPFKGH WAEPSVDKL+ LMR V
Sbjct: 395 SMSLPVIATNWSGPLEYLTEENSYPLPVDRLSEVMEGPFKGHLWAEPSVDKLQHLMRHVT 454
Query: 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSKI 383
+NV+EA+AK +QAREDMI RFSP+ VAG+VT+ +K+IL + +
Sbjct: 455 ANVEEAQAKARQAREDMITRFSPQVVAGVVTNQLKNILDTMV 496
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358346031|ref|XP_003637076.1| hypothetical protein MTR_070s0002 [Medicago truncatula] gi|355503011|gb|AES84214.1| hypothetical protein MTR_070s0002 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 281/399 (70%), Positives = 317/399 (79%), Gaps = 23/399 (5%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE WSYIL+L+ H K F+LAIEHHGDL+SL FWEGLP M+NLAVEL
Sbjct: 82 MAPFLSGGGYSSEGWSYILSLHGHTKIQSFRLAIEHHGDLESLDFWEGLPQDMKNLAVEL 141
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
Y T+C NETVVICHSEPGAWYPPLFDT PCPP+ Y F AVIGRTMFETDRV+ EHV+
Sbjct: 142 YQTKCNMNETVVICHSEPGAWYPPLFDTFPCPPS-FYRHFKAVIGRTMFETDRVNVEHVE 200
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCNRMD+VWVPTDFH +TFI SGV+ +KVVKIVQP+ V FFDP +DL S GK +LG
Sbjct: 201 RCNRMDYVWVPTDFHKATFIESGVNASKVVKIVQPIDVKFFDPDKYKALDLDSTGKLILG 260
Query: 181 LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK 240
S + T FVFLS+FKWEYRKGWDVLLK+YL+EFSK D VVLYLLTNPYH+ RDFGNK
Sbjct: 261 -SEVKTG---FVFLSIFKWEYRKGWDVLLKSYLKEFSKDDSVVLYLLTNPYHTERDFGNK 316
Query: 241 IVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAMS 282
I++FVE+S E+P GWA AAD FVLPSRGEGWGRPLVEAMS
Sbjct: 317 ILDFVENSGFEEPVSGWASVYVIDTHIAQSELPRVYKAADAFVLPSRGEGWGRPLVEAMS 376
Query: 283 MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
M LPVIATNWSGPTE+LTE+N YPL V RMSE+ EGPFKGH WAEPS DKL+ LMR V+
Sbjct: 377 MSLPVIATNWSGPTEFLTEDNSYPLPVDRMSELMEGPFKGHLWAEPSEDKLQVLMRQVMD 436
Query: 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381
N EAKAKG++AREDMI++FSPE VA IV DHI++IL S
Sbjct: 437 NPAEAKAKGRKAREDMIRQFSPEIVADIVADHIQNILGS 475
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357442811|ref|XP_003591683.1| hypothetical protein MTR_1g090540 [Medicago truncatula] gi|355480731|gb|AES61934.1| hypothetical protein MTR_1g090540 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/397 (70%), Positives = 316/397 (79%), Gaps = 23/397 (5%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE WSYIL+L+ H K F+LAIEHHGDL+SL FWEGLP M+NLAVEL
Sbjct: 82 MAPFLSGGGYSSEGWSYILSLHGHTKIQSFRLAIEHHGDLESLDFWEGLPQDMKNLAVEL 141
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
Y T+C NETVVICHSEPGAWYPPLFDT PCPP+ Y F AVIGRTMFETDRV+ EHV+
Sbjct: 142 YQTKCNMNETVVICHSEPGAWYPPLFDTFPCPPS-FYRHFKAVIGRTMFETDRVNVEHVE 200
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCNRMD+VWVPTDFH +TFI SGV+ +KVVKIVQP+ V FFDP +DL S GK +LG
Sbjct: 201 RCNRMDYVWVPTDFHKATFIESGVNASKVVKIVQPIDVKFFDPDKYKALDLDSTGKLILG 260
Query: 181 LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK 240
S + T FVFLS+FKWEYRKGWDVLLK+YL+EFSK D VVLYLLTNPYH+ RDFGNK
Sbjct: 261 -SEVKTG---FVFLSIFKWEYRKGWDVLLKSYLKEFSKDDSVVLYLLTNPYHTERDFGNK 316
Query: 241 IVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAMS 282
I++FVE+S E+P GWA AAD FVLPSRGEGWGRPLVEAMS
Sbjct: 317 ILDFVENSGFEEPVSGWASVYVIDTHIAQSELPRVYKAADAFVLPSRGEGWGRPLVEAMS 376
Query: 283 MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
M LPVIATNWSGPTE+LTE+N YPL V RMSE+ EGPFKGH WAEPS DKL+ LMR V+
Sbjct: 377 MSLPVIATNWSGPTEFLTEDNSYPLPVDRMSELMEGPFKGHLWAEPSEDKLQVLMRQVMD 436
Query: 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379
N EAKAKG++AREDMI++FSPE VA IV DHI++IL
Sbjct: 437 NPAEAKAKGRKAREDMIRQFSPEIVADIVADHIQNIL 473
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297833840|ref|XP_002884802.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] gi|297330642|gb|EFH61061.1| glycosyl transferase family 1 protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/401 (66%), Positives = 320/401 (79%), Gaps = 20/401 (4%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLS GGYSSE+WSYIL+L+ H+ NPRF++ IEHHGDL+S++FW GL + LA+E+
Sbjct: 90 MAPFLSSGGYSSEAWSYILSLHNHLTNPRFRITIEHHGDLESVEFWNGLAKETKELAIEM 149
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
Y T+CR NET+V+CHSEPGAWYPPLF+TLPCPPT GY DF++VIGRTMFETDRV+PEHVK
Sbjct: 150 YRTQCRPNETIVVCHSEPGAWYPPLFETLPCPPT-GYEDFLSVIGRTMFETDRVNPEHVK 208
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCN+MD VWVPT+FHVS+F++SGVD +KVVKIVQPV VGFFDP+ +P+DL ++G VLG
Sbjct: 209 RCNQMDHVWVPTEFHVSSFVQSGVDSSKVVKIVQPVDVGFFDPLKYEPLDLMAVGDLVLG 268
Query: 181 LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK 240
S M + FVFLSVFKWE RKGWDVLLKAYL EFS D V L+LLTN YHS DFGNK
Sbjct: 269 -SGMKNAGLGFVFLSVFKWEQRKGWDVLLKAYLREFSGKDNVALFLLTNAYHSDSDFGNK 327
Query: 241 IVNFVEDSDLEKPDDGWA------------------PAADVFVLPSRGEGWGRPLVEAMS 282
I++FVE+ ++++ +G+ AAD FVLP+RGEGWGRP+VEAM+
Sbjct: 328 ILDFVEELNIQELRNGYPFVYVIDKHIAQVDLPRLYKAADAFVLPTRGEGWGRPIVEAMA 387
Query: 283 MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
M LPVIATNWSGPTEYLTE NGYPL+V MSEV EGPF+GH WAEPSVDKLR LMR V+S
Sbjct: 388 MSLPVIATNWSGPTEYLTERNGYPLVVEEMSEVKEGPFEGHQWAEPSVDKLRVLMRHVMS 447
Query: 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSKI 383
N+DEAK KG + R+DMIQ+F+PE VA +V D I+ I KI
Sbjct: 448 NLDEAKVKGNRGRDDMIQKFAPEVVAKVVADQIERIFDEKI 488
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435172|ref|XP_004135369.1| PREDICTED: uncharacterized protein LOC101204678 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/404 (66%), Positives = 312/404 (77%), Gaps = 23/404 (5%)
Query: 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFLSGGGYSSE+WSYILAL H+ NP F+L I HHGDL+S+ FWEGLP +RNLA+EL
Sbjct: 79 MAPFLSGGGYSSEAWSYILALRHHITNPGFRLVIRHHGDLESVDFWEGLPESVRNLAIEL 138
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
+ T CR NETVVICHSEPGAW PPLF+TLPCPP P Y F +VIGRTMFETDRV+ EHV
Sbjct: 139 HRTRCRMNETVVICHSEPGAWNPPLFETLPCPPGP-YQKFKSVIGRTMFETDRVTREHVN 197
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCN MD+VWVP++FHVSTF+ SGVDP+K+VK+VQPV V FFDP+ P+ L S+G VLG
Sbjct: 198 RCNVMDYVWVPSEFHVSTFVESGVDPSKIVKVVQPVDVNFFDPLKYKPLSLESVGTLVLG 257
Query: 181 LSN----MNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRD 236
N + K FVFLS+FKWE+RKGWDVLL+AYL+EFSK D V L+LLTNPYH+ D
Sbjct: 258 GKNFEEEVKLEKKRFVFLSIFKWEFRKGWDVLLEAYLKEFSKKDEVGLFLLTNPYHTDSD 317
Query: 237 FGNKIVNFVEDSDLEKPDDGWAP------------------AADVFVLPSRGEGWGRPLV 278
FGNKI++FVE+SDL+ P GWAP AAD FVLPSRGEGWGRPLV
Sbjct: 318 FGNKILDFVENSDLQMPLSGWAPVYVVDIHIPQTDLPRVYKAADAFVLPSRGEGWGRPLV 377
Query: 279 EAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMR 338
EAM+M LPVIATNWSG TE+LT+EN YPL V RMSEV E PFKGH WAEPS+ KL+ LMR
Sbjct: 378 EAMAMSLPVIATNWSGQTEFLTDENSYPLPVERMSEVKEEPFKGHMWAEPSISKLQVLMR 437
Query: 339 LVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382
V NVDEAK KG++AR+DMI RFSP+ VA IV I++I K
Sbjct: 438 EVTVNVDEAKEKGRRARQDMIDRFSPDIVADIVHRQIENIFHEK 481
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 383 | ||||||
| TAIR|locus:2075820 | 487 | AT3G10630 "AT3G10630" [Arabido | 0.992 | 0.780 | 0.551 | 8.4e-113 | |
| TAIR|locus:2153281 | 505 | AT5G59070 [Arabidopsis thalian | 0.370 | 0.281 | 0.321 | 1.8e-05 | |
| UNIPROTKB|Q0C423 | 394 | HNE_0792 "Putative glycosyl tr | 0.250 | 0.243 | 0.323 | 2.6e-05 |
| TAIR|locus:2075820 AT3G10630 "AT3G10630" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 220/399 (55%), Positives = 272/399 (68%)
Query: 1 MAPFLXXXXXXXXXXXXILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
MAPFL +L+L H+ NPRF++ IEHHGDL+S++FW GL + +A+E+
Sbjct: 90 MAPFLSSGGYSSEAWSYVLSLRNHLTNPRFRITIEHHGDLESVEFWNGLAKETKEVAIEM 149
Query: 61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
Y +CR NET+V+CHSEPGAWYPPLF+TLPCPPT GY DF++VIGRTMFETDRV+PEHVK
Sbjct: 150 YREQCRPNETIVVCHSEPGAWYPPLFETLPCPPT-GYEDFLSVIGRTMFETDRVNPEHVK 208
Query: 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
RCN+MD VWVPTDFHVS+F++SGVD +KVVKIVQPV VGFFDP P+DL ++G VLG
Sbjct: 209 RCNQMDHVWVPTDFHVSSFVQSGVDSSKVVKIVQPVDVGFFDPSKYKPLDLMAVGDLVLG 268
Query: 181 LSNMN----------TSSKEF-----VFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLY 225
N K + +LS F E +L AY + + ++ +
Sbjct: 269 SGMKNGFVFLSVFKWEQRKGWDVLLKAYLSEFSGEDNVALFLLTNAYHSDSDFGNKILDF 328
Query: 226 LLTNPYHSGRDFGNKIVNFVEDSDLEKPD-DGWAPAADVFVLPSRGEGWGRPLVEAMSMG 284
+ R+ G V +V D + + D AAD FVLP+RGEGWGRP+VEAM+M
Sbjct: 329 VEEMNIEEPRN-GYPFV-YVIDKHIAQVDLPRLYKAADAFVLPTRGEGWGRPIVEAMAMS 386
Query: 285 LPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344
LPVI TNWSGPTEYLTE NGYPL+V MSEV EGPF+GH WAEPSVDKLR LMR V+SN
Sbjct: 387 LPVITTNWSGPTEYLTERNGYPLVVEEMSEVKEGPFEGHQWAEPSVDKLRVLMRRVMSNP 446
Query: 345 DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSKI 383
DEAK KGK+ R+DM++ F+PE VA +V D I I KI
Sbjct: 447 DEAKVKGKRGRDDMVKNFAPEVVAKVVADQIARIFDEKI 485
|
|
| TAIR|locus:2153281 AT5G59070 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 53/165 (32%), Positives = 81/165 (49%)
Query: 209 LKAYLEEFSKA--DGVVLYLLTNPYHSG-RDFGNKIVNFVEDSDLEKPDDGWAPAADVFV 265
LK EE +A + VVL P+ + +D G+ V + D EK G+ A DVFV
Sbjct: 339 LKRVFEENKEARENVVVLVAGDGPWGNRYKDLGSTNVIVLGPLDQEKLA-GFYNAIDVFV 397
Query: 266 LPS-RGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHF 324
P+ R +G L+EAM G PV+AT + T V GP G+
Sbjct: 398 NPTLRAQGLDHTLLEAMVSGKPVLATRLASIT----------------GSVVVGPHLGYT 441
Query: 325 WAEPSVDKL-RALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
++ P+V+ L A++R+V +E + KGK+ARE ++ F+ +A
Sbjct: 442 FS-PNVESLTEAILRVVSDGTEELQRKGKEARERSLRLFTATKMA 485
|
|
| UNIPROTKB|Q0C423 HNE_0792 "Putative glycosyl transferase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 33/102 (32%), Positives = 50/102 (49%)
Query: 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTE--GP 319
D+ + R EG+G P+ EAM+MG VIAT WSG +++ E P+ + EV +
Sbjct: 276 DILLSLHRAEGFGLPIAEAMAMGKVVIATGWSGNMDFMDETCSVPVPY-ELVEVADKYNV 334
Query: 320 FKGH---FWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDM 358
+ GH WA+P V A + + + G+ AR M
Sbjct: 335 YTGHTGAVWADPDVGAAAAALTQIADDPALRLRLGETARSKM 376
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 383 371 0.00086 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 623 (66 KB)
Total size of DFA: 275 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.01u 0.12s 30.13t Elapsed: 00:00:01
Total cpu time: 30.01u 0.12s 30.13t Elapsed: 00:00:01
Start: Mon May 20 22:57:21 2013 End: Mon May 20 22:57:22 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 383 | |||
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 2e-21 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 9e-20 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 1e-18 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-17 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 9e-15 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 3e-13 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 1e-12 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 4e-12 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 4e-11 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 2e-09 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 2e-09 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 3e-09 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 8e-09 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 1e-07 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 2e-07 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 2e-07 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 3e-07 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 4e-07 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 4e-07 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 5e-07 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 7e-07 | |
| PHA01630 | 331 | PHA01630, PHA01630, putative group 1 glycosyl tran | 1e-06 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 2e-06 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 8e-06 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 1e-05 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 1e-05 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 1e-05 | |
| cd04955 | 363 | cd04955, GT1_like_6, This family is most closely r | 2e-05 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 2e-05 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 4e-05 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 4e-05 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 7e-05 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 1e-04 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 2e-04 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 2e-04 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 3e-04 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 5e-04 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 6e-04 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 6e-04 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 7e-04 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 0.001 | |
| PRK15427 | 406 | PRK15427, PRK15427, colanic acid biosynthesis glyc | 0.002 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 0.003 | |
| PHA01633 | 335 | PHA01633, PHA01633, putative glycosyl transferase | 0.003 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 0.004 | |
| TIGR04005 | 406 | TIGR04005, wcaL, colanic acid biosynthesis glycosy | 0.004 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 94.0 bits (234), Expect = 2e-21
Identities = 65/249 (26%), Positives = 96/249 (38%), Gaps = 47/249 (18%)
Query: 141 RSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200
G+DP KV I V F P + + + + V L V +
Sbjct: 165 ALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPE------------DKKVILFVGRLV 212
Query: 201 YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-------- 252
RKG D L++A K V L + G + + LE
Sbjct: 213 PRKGIDYLIEALARLLKKRPDVHLVI----VGDGPL-REALEALAAELGLEDRVTFLGAV 267
Query: 253 PDD---GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLV 309
P + + AADVFVLPS EG+G L+EAM+ GLPV+AT+ G E +T+ LLV
Sbjct: 268 PHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGE-NGLLV 326
Query: 310 GRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAG 369
E + + L+ D G+ AR + +RFS E VA
Sbjct: 327 PPGD------------PEALAEAILRLLA------DPWLRLGRAARRRVAERFSWENVAE 368
Query: 370 IVTDHIKDI 378
+ + +++
Sbjct: 369 RLLELYREV 377
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 9e-20
Identities = 82/364 (22%), Positives = 120/364 (32%), Gaps = 57/364 (15%)
Query: 23 EHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPGAWY 82
+ + I L+ L + L + R + VV H
Sbjct: 42 GGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFD--VVHAHDWLALLA 99
Query: 83 PPLFDTLPCPP---TPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTF 139
L L P T +F + R D + ++
Sbjct: 100 AALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREEL 159
Query: 140 IRSG-VDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198
G V P K+ I V F P +G P E V L V +
Sbjct: 160 RELGGVPPEKITVIPNGVDTERFRPA--PRAARRRLGIP----------EDEPVILFVGR 207
Query: 199 WEYRKGWDVLLKAY---LEEFSKADGVV---------LYLLTNPYHSGRDFGNKIVNFVE 246
RKG D+LL+A +E+ V+ L L G + FV
Sbjct: 208 LVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRV--TFLGFVP 265
Query: 247 DSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT-EENGY 305
D DL AADVFVLPS EG+G L+EAM+ GLPV+A++ G E + E G
Sbjct: 266 DEDLPA----LYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETG- 320
Query: 306 PLLVGRMSEVTEGPFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSP 364
P + L + ++ + + + G+ ARE + +RFS
Sbjct: 321 ------------------LLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSW 362
Query: 365 ETVA 368
+ VA
Sbjct: 363 DRVA 366
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 86.2 bits (212), Expect = 1e-18
Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 49/271 (18%)
Query: 123 NRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLS 182
D V + GV P K+V I + F P +
Sbjct: 149 LLADRVIAVSPALKELLEALGV-PNKIVVIPNGIDTEKFAPARIGLLP------------ 195
Query: 183 NMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIV 242
+FV L V + + KG D+L++A + + + L ++ G + ++
Sbjct: 196 ----EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIV----GDGPERREELE 247
Query: 243 NFVEDSDLEKPDD--GWAP---------AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291
+ LE G+ P +ADVFVLPS EG+G L+EAM+ G PVIA++
Sbjct: 248 KLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASD 307
Query: 292 WSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKG 351
VG + EV E G V++L + ++ + + + G
Sbjct: 308 -----------------VGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELG 350
Query: 352 KQAREDMIQRFSPETVAGIVTDHIKDILSSK 382
+ ARE + + FS E +A + + +++L+ K
Sbjct: 351 EAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 2e-17
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 31/179 (17%)
Query: 189 KEFVFLSVFKWEYRKGWDVLLKAY---LEEFSKA------DGVVLYLLTNPYHSGRDFGN 239
+ + L V + KG D+LL+A+ E+ DG L +
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALK-LGLED 59
Query: 240 KIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYL 299
++ D + + AD+FVLPSR EG+G L+EAM+ G+PVIAT+ GP E +
Sbjct: 60 NVIFVGFVPDEDLIE--LYRIADLFVLPSRYEGFGLVLLEAMAAGVPVIATDVGGPAEIV 117
Query: 300 TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARED 357
+ E G LV + L + ++ + + + G+ AR+
Sbjct: 118 KDGETGL--LV----------------DPGDAEALAEAIEKLLKDEELRERLGENARKR 158
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.5 bits (184), Expect = 9e-15
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEG 318
AADVFVLPS EG R L+EAM+MG PVIAT+ G E + + NG+ LV
Sbjct: 263 AADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGF--LV--------- 311
Query: 319 PFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P + L + ++ + + G+ AR+ + F E V
Sbjct: 312 PPG-------DAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVV 354
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 3e-13
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 32/207 (15%)
Query: 168 PIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLL 227
PID+ I + V L+V + +KG+D L++A+ + L +L
Sbjct: 167 PIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL 226
Query: 228 TNPYHSGRDFGNKIVNFVEDSDLEKPDD----GWAP-------AADVFVLPSRGEGWGRP 276
+ G ++ ++ L D G+ AAD+FVL SR EG+
Sbjct: 227 GD----GPLR-EELEALAKELGLA--DRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNV 279
Query: 277 LVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL 336
L+EAM++G PV+AT+ GP E + E+ LLV E ++
Sbjct: 280 LLEAMALGTPVVATDCPGPRE-ILEDGENGLLVPVG-------------DEAALAAAALA 325
Query: 337 MRLVVSNVDEAKAKGKQAREDMIQRFS 363
+ ++ + + + ARE + + +S
Sbjct: 326 LLDLLLDPELRERLAAAARERVAREYS 352
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 1e-12
Identities = 57/257 (22%), Positives = 87/257 (33%), Gaps = 61/257 (23%)
Query: 134 FHVST-----FIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSS 188
H ++ IR A + I V + F P P+L
Sbjct: 153 VHATSEQEAAEIRRLGLKAPIAVIPNGVDIPPFAA---LPSRGRRRKFPILP------DK 203
Query: 189 KEFVFLSVFKWEYRKGWDVLLKAY---LEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF- 244
+ +FL +KG D+L++A+ E F L + G D G
Sbjct: 204 RIILFLGRL--HPKKGLDLLIEAFAKLAERF---PDWHLVIA------GPDEGGYRAELK 252
Query: 245 --VEDSDLE---------KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291
LE +D A AD+FVLPS E +G + EA++ G PV+ T+
Sbjct: 253 QIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTD 312
Query: 292 WSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKG 351
E + G + + VD L A +R + KA G
Sbjct: 313 KVPWQELIEYGCG-------------------WVVDDDVDALAAALRRALELPQRLKAMG 353
Query: 352 KQAREDMIQRFSPETVA 368
+ R + +RFS +A
Sbjct: 354 ENGRALVEERFSWTAIA 370
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.5 bits (163), Expect = 4e-12
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 23/111 (20%)
Query: 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW-SGPTEYLT-EENGYPLLVGRMSEVTEG 318
A +FVL SR EG+ L+EAM+ GLPVI+ + +GP+E + NG LLV
Sbjct: 253 ASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNG--LLV--------- 301
Query: 319 PFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
V+ L + ++ + + K G ARE +RFS E +
Sbjct: 302 --------PNGDVEALAEALLRLMEDEELRKRMGANARESA-ERFSIENII 343
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 4e-11
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 25/113 (22%)
Query: 259 PAADVFVLPSRGEGWGRPLV--EAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVT 316
A DVFVL S EG+ P V EAM+ GLPV+AT+ G L + G+ LV
Sbjct: 267 NALDVFVLSSLSEGF--PNVLLEAMACGLPVVATD-VGDNAELVGDTGF--LV------- 314
Query: 317 EGPFKGHFWAEPS-VDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P + L + ++++ +A G+ ARE + + FS E +
Sbjct: 315 ----------PPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMV 357
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 2e-09
Identities = 51/241 (21%), Positives = 85/241 (35%), Gaps = 55/241 (22%)
Query: 143 GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYR 202
GV P K+V I V F P + A P F+++ + R
Sbjct: 160 GVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLP----------RPYFLYVGTIEP--R 207
Query: 203 KGWDVLLKAYLEEFSKADGVVLYL------LTNPYHSGRDFGN-----KIVNFVEDSDLE 251
K + LL+A+ +K L + L + + + +V D +L
Sbjct: 208 KNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEEL- 266
Query: 252 KPDDGWAPA----ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPL 307
A A FV PS EG+G P++EAM+ G PVIA+N
Sbjct: 267 -------AALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASN---------------- 303
Query: 308 LVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETV 367
+ + EV ++ + L A + ++ + + ++ +RFS E
Sbjct: 304 -ISSLPEVAGDA--ALYFDPLDPEALAAAIERLLEDPALREELRERGLARA-KRFSWEKT 359
Query: 368 A 368
A
Sbjct: 360 A 360
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 2e-09
Identities = 38/129 (29%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 187 SSKEFVFLSVFKWEYRKGWDVLLKAY---LEEFSKA------DGVVLYLLTNPYHSGRDF 237
S + V + KG D L++A+ E DG L +
Sbjct: 101 SIGLADKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLL 160
Query: 238 GNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTE 297
++ E AADVFVLPS EG+G ++EAM+ GLPVIAT+ GP E
Sbjct: 161 DR-VIFLGGLDPEELLALL-LAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPE 218
Query: 298 -YLTEENGY 305
G
Sbjct: 219 IVEDGLTGL 227
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGP 319
AAD+FVL S EG+G + EAM+ LPV+AT+ G E + + L+V
Sbjct: 262 AADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGDSG---LIVPISD------ 312
Query: 320 FKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
E +K+ ++++ E + RE ++++FS ++
Sbjct: 313 ------PEALANKIDEILKM----SGEERDIIGARRERIVKKFSINSIV 351
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 8e-09
Identities = 38/114 (33%), Positives = 45/114 (39%), Gaps = 24/114 (21%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGP 319
A D+FVLPS EG ++EAM+ GLPVIAT G E L + LV
Sbjct: 272 ALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPE-LVQHGVTGALV---------- 320
Query: 320 FKGHFWAEPSVDK---LRALMRLVVSNVDEAKAKGKQAREDMIQRFS-PETVAG 369
P D RAL V +A G R Q+FS VA
Sbjct: 321 --------PPGDAVALARALQPYVSDPA-ARRAHGAAGRARAEQQFSINAMVAA 365
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTE 317
+D+F+LPS E +G +EAM+ G+PVIA+N G E + G+ VG + + E
Sbjct: 271 SISDLFLLPSEKESFGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLCDVGDVETMAE 330
Query: 318 GPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETV 367
A+ L + + + ARE +RF E +
Sbjct: 331 ----------------YAISLL--EDEELLQRFSAAARERAKERFDSEKI 362
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT-EENGYPLLVGRMSEVTEG 318
AADVFV P+ E +G +EAM+ GLPV+AT GP + + G LLV
Sbjct: 302 AADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTG--LLV--------D 351
Query: 319 PFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P A AL RL +++ + + R++ E VA
Sbjct: 352 PRDPEALAA-------ALRRL-LTDPALRRRLSRAGLRRARARYTWERVA 393
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 2e-07
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 34/127 (26%)
Query: 256 GWAP---------AADVFVLPSR----GEGWGRPLV--EAMSMGLPVIATNWSGPTEYLT 300
G AAD+FVLPS G+ G P+V EAM+MGLPVI+T+ SG E +
Sbjct: 242 GAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVE 301
Query: 301 -EENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMI 359
E G LLV + L + ++ + + + G+ R +
Sbjct: 302 DGETG--LLV----------------PPGDPEALADAIERLLDDPELRREMGEAGRARVE 343
Query: 360 QRFSPET 366
+ F
Sbjct: 344 EEFDIRK 350
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 3e-07
Identities = 51/212 (24%), Positives = 75/212 (35%), Gaps = 61/212 (28%)
Query: 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKP--VL 179
NR D V P++ GV K V P IDL
Sbjct: 146 YNRCDAVIAPSEKIADLLREYGV---KRPIEVIPTG-----------IDLDRFEPVDGDD 191
Query: 180 GLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKA-----------------------YLEEF 216
+ E V L V + K D L++A LEE
Sbjct: 192 ERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEEL 251
Query: 217 SKADGVVLYLLTNPYHSGRDFGNKIV--NFVEDSDLEKPDDGWAPAADVFVLPSRGEGWG 274
++ G+ ++++ FV +L PD + AAD+FV S E G
Sbjct: 252 ARELGL---------------ADRVIFTGFVPREEL--PD--YYKAADLFVFASTTETQG 292
Query: 275 RPLVEAMSMGLPVIATNWSGPTEYLTE-ENGY 305
L+EAM+ GLPV+A + G + + + ENG+
Sbjct: 293 LVLLEAMAAGLPVVAVDAPGLPDLVADGENGF 324
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 21/104 (20%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEG 318
+ADVFV PSR E +G ++EAM+ GLPV+A + GP + +T+ ENG LV
Sbjct: 266 SADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGL--LV--------- 314
Query: 319 PFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQR 361
EP + A + ++++ + + +AR + +R
Sbjct: 315 --------EPGDAEAFAAALAALLADPELRRRMAARARAEAERR 350
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 4e-07
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT-EENGYPLLVGRMSEVTEG 318
AADVFV+PS E + +EA++ G PV+A + G + + GY L
Sbjct: 264 AADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGY--LA--------K 313
Query: 319 PFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P + L + ++++ DE + G+ ARE F A
Sbjct: 314 PG--------DPEDLAEGIEWLLADPDEREELGEAARELAENEFDSRVQA 355
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 21/110 (19%)
Query: 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS-GPTEYLTE-ENGYPLLVGRMSEVTEG 318
A + +L S+ EG+G L+EA+S GLPVI+ + + GP+E + + ENGY LV
Sbjct: 279 AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGY--LV--------- 327
Query: 319 PFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P ++ L + ++++ + + A E +R+S E V
Sbjct: 328 PKGD-------IEALAEAIIELLNDPKLLQKFSEAAYE-NAERYSEENVW 369
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEG 318
AD+F+LPS E +G +EAM+ G+PV+A+N G E + G + +V +
Sbjct: 269 SIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGE-----TGFLVDVGD- 322
Query: 319 PFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETV 367
V+ + ++ + + + + AR +RF E +
Sbjct: 323 -----------VEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERI 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|164861 PHA01630, PHA01630, putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 58/275 (21%), Positives = 111/275 (40%), Gaps = 31/275 (11%)
Query: 102 AVIGRTMFETDRVSPEHVK--RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVG 159
I + +TD +S + R +D + VP+ + + F SG+ KI QP++V
Sbjct: 70 KNIVFEVADTDAISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGL------KIPQPIYV- 122
Query: 160 FFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKA 219
+N + KP V + RKG D+++K + E ++
Sbjct: 123 IPHNLNPRMFEYKPKEKPH-----------PCVLAILPHSWDRKGGDIVVKIFHELQNEG 171
Query: 220 DGVVLYLLTNPYHSGRDFG-NKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLV 278
+ ++ R FG N + + D D+ G D+ P RG + P++
Sbjct: 172 YDFYFLIKSSNMLDPRLFGLNGVKTPLPDDDIYSLFAG----CDILFYPVRGGAFEIPVI 227
Query: 279 EAMSMGLPVIATNWSGPTEY-LTEENGYPLLVGRMSEV-TEGPFK-GHFWAEPSVDKL-- 333
EA+++GL V+ T +E+ L+ + Y + GR ++ P G+F +P ++
Sbjct: 228 EALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF-LDPDIEDAYQ 286
Query: 334 RALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
+ L L ++ K + + +S +A
Sbjct: 287 KLLEALANWTPEKKKENLEGRAILYRENYSYNAIA 321
|
Length = 331 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 2e-06
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 20/112 (17%)
Query: 260 AADVFVLPS--RGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTE 317
A DVFV PS R E +G L+EAM+ G PVI+T Y+ L+V
Sbjct: 263 ACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV-------- 314
Query: 318 GPFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P L +R ++ + + + G+ ARE + F+ + +
Sbjct: 315 ---------PPGDPAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRMV 357
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENG---YPLLVGRMSE 314
AD F PS EG+G ++EA++ G+PV+A++ + TEYL + P +++
Sbjct: 276 CADAFAFPSLKEGFGLVVLEALASGIPVVASDIAPFTEYLGRFDAAWADPSDPDSIAD 333
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 1e-05
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 19/106 (17%)
Query: 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKG 322
+ + PSR + + EA + G P++ G E +L E+
Sbjct: 1 IVLNPSRRDSPNMRVFEAAACGAPLLTDRTPGLEELFEPGEEI-VLYRDPEEL------- 52
Query: 323 HFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
+KLR L+ + +E +A RE ++ + E A
Sbjct: 53 -------AEKLRYLLA----DPEERRAIAAAGRERVLAEHTYEHRA 87
|
Length = 92 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGP 319
ADV VLPS E +E M GLP+I T +G +E + + NGY + + E +
Sbjct: 301 ADVGVLPSFHEQCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKI---PIKEYRDYV 357
Query: 320 FKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
E +L + ++S+ DEAK GK AR ++++S E +
Sbjct: 358 -------ELDKKELVQKLLKLLSSSDEAKQMGKNARRRYLEKYSLEVMR 399
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 55/237 (23%), Positives = 80/237 (33%), Gaps = 47/237 (19%)
Query: 146 PAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGW 205
P K+ I V +P G+PVL F L Y KG
Sbjct: 155 PEKIAVIPHGVPDPPAEPPESLKALGGLDGRPVLLT---------FGLLR----PY-KGL 200
Query: 206 DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKP---DDGWAP--- 259
++LL+A +K V L + + + + E L + + P
Sbjct: 201 ELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEE 260
Query: 260 ------AADVFVLPSRGEGWGRP--LVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGR 311
AADV VLP R + L A+ G PVI+T E L G LLV
Sbjct: 261 LPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGHAEEVLDGGTG--LLV-- 316
Query: 312 MSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
L +R ++++ + A+A +ARE + S E VA
Sbjct: 317 --------------PPGDPAALAEAIRRLLADPELAQALRARARE-YARAMSWERVA 358
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 24/108 (22%)
Query: 264 FVLPSRGEGWGRP--LVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFK 321
F L G G L+EAM+ G PV+A++ N + EV K
Sbjct: 271 FYLHGHSVG-GTNPSLLEAMAYGCPVLASD-----------NPFNR------EVLGD--K 310
Query: 322 GHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAG 369
++ D L +L+ + ++ +E A K ARE + ++++ E +A
Sbjct: 311 AIYF--KVGDDLASLLEELEADPEEVSAMAKAARERIREKYTWEKIAD 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 23/184 (12%)
Query: 136 VSTFIRS------GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSK 189
VS FI GVDP ++ I + V + FDP P + ++ +
Sbjct: 131 VSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKG------ 184
Query: 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD 249
+ V L + KG +V ++A L K D V L+ R + +++ ++
Sbjct: 185 KPVILLPGRLTRWKGQEVFIEA-LARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLG 243
Query: 250 LEK-------PDD--GWAPAADVFVLPS-RGEGWGRPLVEAMSMGLPVIATNWSGPTEYL 299
L+ D AD+ V S E +GR VEA +MG PVIA++ G E +
Sbjct: 244 LQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETV 303
Query: 300 TEEN 303
Sbjct: 304 RPGE 307
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 25/114 (21%)
Query: 257 WAPAADVFVLPSR------GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLV 309
A +F+ PS EG L+EA + G+PV+AT G E + + E G LV
Sbjct: 261 LMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGL--LV 318
Query: 310 GRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFS 363
E V L A + ++++ D G R + +RF
Sbjct: 319 ----------------PEGDVAALAAALGRLLADPDLRARMGAAGRRRVEERFD 356
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 4e-05
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 16/78 (20%)
Query: 239 NKIVNF---VEDSDL-----EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIAT 290
N VNF + +S++ E P DVFV S EG ++EAMS G+PVIAT
Sbjct: 288 NISVNFTGELSNSEVYKLYKENP-------VDVFVNLSESEGLPVSIMEAMSFGIPVIAT 340
Query: 291 NWSGPTEYLTEE-NGYPL 307
N G E + NG L
Sbjct: 341 NVGGTPEIVDNGGNGLLL 358
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 7e-05
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 257 WAPAADVFVLPSRGEGWGRPLV--EAMSMGLPVIATN 291
+ P DV VL S EG +PLV EAM+ G+PV+AT+
Sbjct: 367 YLPKLDVLVLTSISEG--QPLVILEAMAAGIPVVATD 401
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 20/93 (21%)
Query: 278 VEAMSMGLPVIATNWSGPTE-YLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL 336
+EAM G PVIA N GP E + E G+ L EP+ ++
Sbjct: 317 LEAMYAGKPVIACNSGGPLETVVDGETGF--LC-----------------EPTPEEFAEA 357
Query: 337 MRLVVSNVDEAKAKGKQAREDMIQRFSPETVAG 369
M + ++ D A G R+ + ++FS E A
Sbjct: 358 MLKLANDPDLADRMGAAGRKRVKEKFSTEAFAE 390
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTE 297
+FV P+ E +G ++EAM+ GLP AT + GP E
Sbjct: 646 IFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLE 680
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 191 FVFLSVFKWEYRKGWDVLLKAYLEEFSKA-DGVVLYLLTNPYHSGRDFGNKIVNFVEDSD 249
G LL+ L KA V L+++ + + D
Sbjct: 3 VFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGPEELARLAPNVHFLGFVED 62
Query: 250 LEKPDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGY 305
L +ADV + P R G G L+EA++ GLPV+AT+ G
Sbjct: 63 LAA----LLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIGAEGLPEDLGWGV 115
|
Length = 134 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTE 297
FV P+ E +G +VEAM+ GLP AT GP E
Sbjct: 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAE 703
|
Length = 815 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 16/99 (16%)
Query: 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPF 320
DVFV+PS E G ++EAM+ G+PV+A G + + +
Sbjct: 332 GDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQ---------------EG 376
Query: 321 KGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDM 358
K F P VD + ++++ + + G ARE++
Sbjct: 377 KTGFLYTPGDVDDCVEKLETLLADPELRERMGAAAREEV 415
|
Length = 465 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT-EENGYPLLVGRMSEVTEG 318
A+VFV PS E G +EAM+ G PV+A+ G E + E G+ LV
Sbjct: 280 NAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGF--LVPP------- 330
Query: 319 PFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
+ A+ +L + +++++ + AK G R+ + FS ++A
Sbjct: 331 ---DNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIA 377
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 203 KGWDVLLKAYLEEFSKADGVVLYL----LTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWA 258
KG D+LL+A+ + L + L S G+ V F+ E+ DD +A
Sbjct: 204 KGVDLLLEAFKR--LPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYA 261
Query: 259 PAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGPTEYL-TEENGY 305
DV V+PS E + + EA++ G+PVIA++ G E + NG
Sbjct: 262 -EIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGL 309
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 7e-04
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291
A DVF+ PS EG L+EA + GLP I ++
Sbjct: 266 AMDVFLFPSLYEGLPLVLIEAQASGLPCILSD 297
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLV 309
+FV P+ E +G L+EA + GLP++AT+ GP + + NG LLV
Sbjct: 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNG--LLV 388
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 14/72 (19%)
Query: 261 ADVFVLPS----RGEGWGRP--LVEAMSMGLPVIATNWSGPTE--------YLTEENGYP 306
ADVF+LPS G+ G P L+EAM++G+PV++T SG E +L EN
Sbjct: 299 ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQ 358
Query: 307 LLVGRMSEVTEG 318
L R++ ++
Sbjct: 359 ALAQRLAAFSQL 370
|
Length = 406 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 28/117 (23%), Positives = 36/117 (30%), Gaps = 24/117 (20%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG-------PTEYLTEENGYPLLVGRM 312
ADV ++PSR E G + AM G I G E+L + G L
Sbjct: 368 GADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF--- 424
Query: 313 SEVTEGPFKGHFWAEPSVDKLRALMR-LVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
H AL R LV+ + K M FS + A
Sbjct: 425 ----LQTNPDHLA--------NALRRALVLYRAPPLLWR-KVQPNAMGADFSWDLSA 468
|
Length = 487 |
| >gnl|CDD|107050 PHA01633, PHA01633, putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVI 288
A D ++PS EG+G P++E+M+MG PVI
Sbjct: 223 AMDFTIVPSGTEGFGMPVLESMAMGTPVI 251
|
Length = 335 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.004
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 24/115 (20%)
Query: 260 AADVFVLPSRGEGWGRP-----LVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSE 314
AADV ++P + L E M+ G PV+A+ G + L EE G G
Sbjct: 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASV-DGESAELVEEAG----AG---- 344
Query: 315 VTEGPFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P + L A + ++ + +E G+ R + ++FS E +A
Sbjct: 345 ---------LVVPPGDPEALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLA 390
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.004
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 14/71 (19%)
Query: 261 ADVFVLPS----RGEGWGRP--LVEAMSMGLPVIATNWSGPTE--------YLTEENGYP 306
ADVF+LPS G+ G P L+EAM++G+PV++T SG E +L EN
Sbjct: 299 ADVFLLPSVTGTDGDMEGIPVALMEAMAVGIPVVSTVHSGIPELVEAGKSGWLVPENDAH 358
Query: 307 LLVGRMSEVTE 317
L R++ +
Sbjct: 359 ALADRLAAFSR 369
|
This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 383 | |||
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.98 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.98 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.98 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.97 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.96 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.95 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.95 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.95 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.95 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.94 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.93 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.92 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.92 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.91 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.91 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.91 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.9 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.9 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.9 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.89 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.88 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.86 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.83 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.83 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.8 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.8 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.79 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.79 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.76 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.75 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.73 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.72 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.67 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.62 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.58 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.53 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.52 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.48 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.48 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.45 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.4 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.4 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.4 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.37 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.35 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.34 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.33 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.32 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 99.31 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 99.22 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 99.13 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 99.1 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.03 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 98.94 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 98.93 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.85 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.83 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.77 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.52 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.47 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.45 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.34 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 98.18 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.13 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.03 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.99 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.92 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 97.89 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 97.89 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 97.85 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 97.73 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.52 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 97.52 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 97.52 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.48 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 97.27 | |
| PF06925 | 169 | MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy | 97.26 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 97.22 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 97.21 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 97.09 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 97.03 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 96.99 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 96.84 | |
| PLN02208 | 442 | glycosyltransferase family protein | 96.48 | |
| PLN02764 | 453 | glycosyltransferase family protein | 96.46 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.43 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 96.4 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 96.4 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.31 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 96.31 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 96.29 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 96.01 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 95.73 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 95.72 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 95.67 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 95.58 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.55 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.53 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.48 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 95.47 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 95.4 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.34 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 95.33 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 95.32 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 95.32 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.26 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.19 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 94.9 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 94.89 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 94.85 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 94.71 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 94.22 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 93.99 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 93.84 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 93.79 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 93.05 | |
| PF12996 | 79 | DUF3880: DUF based on E. rectale Gene description | 92.9 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 92.5 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 92.44 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 92.42 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 92.02 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 91.3 | |
| KOG2884 | 259 | consensus 26S proteasome regulatory complex, subun | 90.95 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 90.54 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 89.79 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 89.6 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 89.13 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 88.96 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 87.97 | |
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 87.13 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 87.04 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 86.55 | |
| COG3414 | 93 | SgaB Phosphotransferase system, galactitol-specifi | 86.41 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 85.22 | |
| COG1927 | 277 | Mtd Coenzyme F420-dependent N(5),N(10)-methenyltet | 84.48 | |
| smart00672 | 256 | CAP10 Putative lipopolysaccharide-modifying enzyme | 83.89 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 83.05 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 80.81 |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=307.01 Aligned_cols=340 Identities=19% Similarity=0.190 Sum_probs=245.5
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccch-----hhcCCC---hhhhhHHHHHHhhhcCCCccEEE
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQ-----FWEGLP---HHMRNLAVELYNTECRTNETVVI 73 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~l~~~~~~~~pDiV~ 73 (383)
-+.+..||.++++.++++.|.+.|+...+ +.+...+...... .+..++ .........+.+++++.+||+||
T Consensus 8 i~~~~~GG~e~~~~~l~~~l~~~~~~~~v-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~l~~~~~Divh 86 (374)
T TIGR03088 8 VYRFDVGGLENGLVNLINHLPADRYRHAV-VALTEVSAFRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLLRQLRPDIVH 86 (374)
T ss_pred eCCCCCCcHHHHHHHHHhhccccccceEE-EEcCCCChhHHHHHhcCceEEEeCCCCCCChHHHHHHHHHHHHhCCCEEE
Confidence 35678899999999999999988775433 2222222211110 011111 22234567788889999999999
Q ss_pred ecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeec--CCCCHHHHH-h-cCCCCEEEEeChHHHHHHHh-cCCCCCC
Q 043412 74 CHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFET--DRVSPEHVK-R-CNRMDFVWVPTDFHVSTFIR-SGVDPAK 148 (383)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~-~~~ad~vi~~s~~~~~~~~~-~~~~~~~ 148 (383)
+|+....+ ............ . ....+++..+.. ..+...+.+ . .+.+|.++++|+..++.+.+ ++.++++
T Consensus 87 ~~~~~~~~-~~~~~~~~~~~~-~---i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~ 161 (374)
T TIGR03088 87 TRNLAALE-AQLPAALAGVPA-R---IHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLEDWLRGPVKVPPAK 161 (374)
T ss_pred EcchhHHH-HHHHHHhcCCCe-E---EEeecCcccccchhhHHHHHHHHHHHHhcCCeEEEeCHHHHHHHHHhcCCChhh
Confidence 99643321 111111111111 0 011111111111 111111222 1 35689999999999999887 6778889
Q ss_pred eEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCC----CeEE
Q 043412 149 VVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKAD----GVVL 224 (383)
Q Consensus 149 i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~----~~~l 224 (383)
+.+|+||+|.+.+.+........ ... .. ..++.++++++||+.+.||++.+++|+.++.++.+ +++|
T Consensus 162 ~~vi~ngvd~~~~~~~~~~~~~~--~~~-~~------~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l 232 (374)
T TIGR03088 162 IHQIYNGVDTERFHPSRGDRSPI--LPP-DF------FADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRL 232 (374)
T ss_pred EEEeccCccccccCCCccchhhh--hHh-hc------CCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEE
Confidence 99999999998776543211000 000 01 14568899999999999999999999999887755 7899
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhCCCC---------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+++|+| +..+.+++.++.+++. +++..+++.||++++||..||+|++++|||+||+|||+|+.+|.
T Consensus 233 ~i~G~g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~ 307 (374)
T TIGR03088 233 VIVGDG-----PARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGN 307 (374)
T ss_pred EEecCC-----chHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCc
Confidence 999987 4456777777766553 56778899999999999999999999999999999999999999
Q ss_pred cccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 296 TEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 296 ~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
.|++.++ +|++++++ |++++++++.++++|++.+..|++++++.+.++|||+.+++++.++
T Consensus 308 ~e~i~~~~~g~~~~~~------------------d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~ 369 (374)
T TIGR03088 308 PELVQHGVTGALVPPG------------------DAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGL 369 (374)
T ss_pred HHHhcCCCceEEeCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999885 78888776 9999999999999999999999999999988999999999999999
Q ss_pred HHHHH
Q 043412 375 IKDIL 379 (383)
Q Consensus 375 ~~~~~ 379 (383)
|++++
T Consensus 370 y~~~~ 374 (374)
T TIGR03088 370 YDQLL 374 (374)
T ss_pred HHHhC
Confidence 99864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=298.67 Aligned_cols=326 Identities=18% Similarity=0.135 Sum_probs=236.6
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCccc-c---h--hhcCCC----------hhhhhHHHHHHhhhcCCCcc
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQS-L---Q--FWEGLP----------HHMRNLAVELYNTECRTNET 70 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~-~---~--~~~~~~----------~~~~~~~~~l~~~~~~~~pD 70 (383)
.||.++++.+++++|.++|+...+ .+...++... . . .+..+| .........+.+.+++.+||
T Consensus 13 ~GG~e~~~~~la~~L~~~G~~V~v--~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~D 90 (398)
T cd03796 13 LGGVETHIYQLSQCLIKRGHKVVV--ITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLLRNILIRERIT 90 (398)
T ss_pred cccHHHHHHHHHHHHHHcCCeeEE--EeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHHHHHHHhcCCC
Confidence 599999999999999999986543 2222111100 0 0 000011 01123445677778889999
Q ss_pred EEEecCCCCCCCC--cccccCCCCCCCCCCCcccccceeee-ecC--CCCHHHHHhcCCCCEEEEeChHHHHHHH-hcCC
Q 043412 71 VVICHSEPGAWYP--PLFDTLPCPPTPGYGDFMAVIGRTMF-ETD--RVSPEHVKRCNRMDFVWVPTDFHVSTFI-RSGV 144 (383)
Q Consensus 71 iV~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ad~vi~~s~~~~~~~~-~~~~ 144 (383)
+||+|+....+.. .++.... +.+.+...++.... ... .........++++|.++++|+...+.+. ..++
T Consensus 91 iIh~~~~~~~~~~~~~~~~~~~-----~~~~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~ 165 (398)
T cd03796 91 IVHGHQAFSALAHEALLHARTM-----GLKTVFTDHSLFGFADASSIHTNKLLRFSLADVDHVICVSHTSKENTVLRASL 165 (398)
T ss_pred EEEECCCCchHHHHHHHHhhhc-----CCcEEEEecccccccchhhHHhhHHHHHhhccCCEEEEecHhHhhHHHHHhCC
Confidence 9999976443211 1111111 11112222221100 000 0111222236899999999999988654 4677
Q ss_pred CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEE
Q 043412 145 DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVL 224 (383)
Q Consensus 145 ~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l 224 (383)
+++++.+||||+|.+.|.+..... .++.++++++|++.++||++.+++|++.+.++.++++|
T Consensus 166 ~~~k~~vi~ngvd~~~f~~~~~~~------------------~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l 227 (398)
T cd03796 166 DPERVSVIPNAVDSSDFTPDPSKR------------------DNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRF 227 (398)
T ss_pred ChhhEEEEcCccCHHHcCCCcccC------------------CCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEE
Confidence 778999999999988776543210 35678999999999999999999999999888899999
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
+++|+| +..+.++++++.+++. +++..+++.||++++||..|++|++++|||+||+|||+|+.+
T Consensus 228 ~i~G~g-----~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~g 302 (398)
T cd03796 228 IIGGDG-----PKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVG 302 (398)
T ss_pred EEEeCC-----chHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCC
Confidence 999987 4467778888877664 345678899999999999999999999999999999999999
Q ss_pred CccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 294 GPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 294 g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
|..|++.++.+++++. |+++++++|.++++++.....+..++++.+.++|||+.+++++.+
T Consensus 303 g~~e~i~~~~~~~~~~-------------------~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ 363 (398)
T cd03796 303 GIPEVLPPDMILLAEP-------------------DVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYSWEDVAKRTEK 363 (398)
T ss_pred CchhheeCCceeecCC-------------------CHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 9999998765443332 899999999999998776667888889989999999999999999
Q ss_pred HHHHHHhc
Q 043412 374 HIKDILSS 381 (383)
Q Consensus 374 ~~~~~~~~ 381 (383)
+|++++..
T Consensus 364 ~y~~l~~~ 371 (398)
T cd03796 364 VYDRILQT 371 (398)
T ss_pred HHHHHhcC
Confidence 99998754
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=301.99 Aligned_cols=268 Identities=21% Similarity=0.280 Sum_probs=217.2
Q ss_pred hhcCCCccEEEecCCCCCCCCcccccC---CCCCCCCCCCcccccceeeeecC---CCCHHHHHhcCCCCEEEEeChHHH
Q 043412 63 TECRTNETVVICHSEPGAWYPPLFDTL---PCPPTPGYGDFMAVIGRTMFETD---RVSPEHVKRCNRMDFVWVPTDFHV 136 (383)
Q Consensus 63 ~~~~~~pDiV~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ad~vi~~s~~~~ 136 (383)
.+++.+||+||+|.....+....+... ..+. ..+.++...+... .....+...++++|.++++|+..+
T Consensus 113 ~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~------~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~ 186 (406)
T PRK15427 113 VATPFVADVFIAHFGPAGVTAAKLRELGVLRGKI------ATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWA 186 (406)
T ss_pred hhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCe------EEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHHH
Confidence 446779999999976543332222221 1111 2233343332111 122344555789999999999999
Q ss_pred HHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHh
Q 043412 137 STFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEF 216 (383)
Q Consensus 137 ~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~ 216 (383)
+.+.+++.+++++.++|||+|.+.|.+..... .++.+.++++||+.+.||++.+++|++.+.
T Consensus 187 ~~l~~~g~~~~ki~vi~nGvd~~~f~~~~~~~------------------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~ 248 (406)
T PRK15427 187 GRLQKMGCPPEKIAVSRMGVDMTRFSPRPVKA------------------PATPLEIISVARLTEKKGLHVAIEACRQLK 248 (406)
T ss_pred HHHHHcCCCHHHEEEcCCCCCHHHcCCCcccc------------------CCCCeEEEEEeCcchhcCHHHHHHHHHHHH
Confidence 99998888888999999999998886533211 234678999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCC------CCCChHHHH
Q 043412 217 SKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRG------EGWGRPLVE 279 (383)
Q Consensus 217 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~------e~~~~~~~E 279 (383)
++.++++++++|+| +..+++++.++++++. +++..+|+.||++++||.. ||+|++++|
T Consensus 249 ~~~~~~~l~ivG~G-----~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llE 323 (406)
T PRK15427 249 EQGVAFRYRILGIG-----PWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALME 323 (406)
T ss_pred hhCCCEEEEEEECc-----hhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHH
Confidence 88899999999998 5678888998888775 3456888999999999974 999999999
Q ss_pred HHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Q 043412 280 AMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVDEAKAKGKQARED 357 (383)
Q Consensus 280 a~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~~~~~~~~~a~~~ 357 (383)
||+||+|||+|+.+|.+|++.++ +|++++++ |+++++++|.++++ |++.+.+|+++++++
T Consensus 324 Ama~G~PVI~t~~~g~~E~v~~~~~G~lv~~~------------------d~~~la~ai~~l~~~d~~~~~~~~~~ar~~ 385 (406)
T PRK15427 324 AMAVGIPVVSTLHSGIPELVEADKSGWLVPEN------------------DAQALAQRLAAFSQLDTDELAPVVKRAREK 385 (406)
T ss_pred HHhCCCCEEEeCCCCchhhhcCCCceEEeCCC------------------CHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999999999886 88888776 99999999999999 999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHH
Q 043412 358 MIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~~~ 377 (383)
+.++|+|+.+++++.++|++
T Consensus 386 v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 386 VETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999976
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=296.50 Aligned_cols=345 Identities=16% Similarity=0.123 Sum_probs=238.4
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcC-----C--------Chhh-----hhHHHHHH-hhhc-
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEG-----L--------PHHM-----RNLAVELY-NTEC- 65 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~-----~~~~~~l~-~~~~- 65 (383)
..||.+.++.+++++|.++|+.+.+.................+ . .... ......+. ..++
T Consensus 18 ~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (405)
T TIGR03449 18 DAGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEVAPGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGVLRAEARH 97 (405)
T ss_pred CCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCccccCCCcEEEEecCCCcccCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 3699999999999999999986654221111111000000001 0 0000 00111122 3333
Q ss_pred -CCCccEEEecCCCCCCCCccccc-CCCCCCCCCCCcccccceeeeecC---CCCHHH--HHhcCCCCEEEEeChHHHHH
Q 043412 66 -RTNETVVICHSEPGAWYPPLFDT-LPCPPTPGYGDFMAVIGRTMFETD---RVSPEH--VKRCNRMDFVWVPTDFHVST 138 (383)
Q Consensus 66 -~~~pDiV~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~ad~vi~~s~~~~~~ 138 (383)
..+||+||+|.....+....+.. ...+.+.+.+..........+... .....+ ...++++|.++++|+...+.
T Consensus 98 ~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~ 177 (405)
T TIGR03449 98 EPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARD 177 (405)
T ss_pred cCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHH
Confidence 24899999996433222212111 122222222222111110110000 011111 22468999999999998888
Q ss_pred HHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhc
Q 043412 139 FIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFS 217 (383)
Q Consensus 139 ~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~ 217 (383)
+.+ ++.+++++.+||||+|.+.+.+..... .+.+++ +++++++|+++|++.+.||++.+++|+..+.+
T Consensus 178 ~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~----~~~~~~-------~~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~ 246 (405)
T TIGR03449 178 LVRHYDADPDRIDVVAPGADLERFRPGDRAT----ERARLG-------LPLDTKVVAFVGRIQPLKAPDVLLRAVAELLD 246 (405)
T ss_pred HHHHcCCChhhEEEECCCcCHHHcCCCcHHH----HHHhcC-------CCCCCcEEEEecCCCcccCHHHHHHHHHHHHh
Confidence 776 787778999999999998776542111 111222 34678899999999999999999999999988
Q ss_pred cCCC--eEEEEEeCCCCCCCchHHHHHHHHhhCCCCC-----------ccccccccCceEEecCCCCCCChHHHHHHHcC
Q 043412 218 KADG--VVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-----------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMG 284 (383)
Q Consensus 218 ~~~~--~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G 284 (383)
+.++ ++|+++|++..+..+..+.++++++.+++.+ ++..+++.||++++||..|+||++++|||++|
T Consensus 247 ~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G 326 (405)
T TIGR03449 247 RDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACG 326 (405)
T ss_pred hCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcC
Confidence 8776 9999999753222145677888888877753 44578899999999999999999999999999
Q ss_pred CCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCC
Q 043412 285 LPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 363 (383)
+|||+++.++..|++.++ +|++++++ |+++++++|.++++|++.+++|++++++.+ ++||
T Consensus 327 ~Pvi~~~~~~~~e~i~~~~~g~~~~~~------------------d~~~la~~i~~~l~~~~~~~~~~~~~~~~~-~~fs 387 (405)
T TIGR03449 327 TPVVAARVGGLPVAVADGETGLLVDGH------------------DPADWADALARLLDDPRTRIRMGAAAVEHA-AGFS 387 (405)
T ss_pred CCEEEecCCCcHhhhccCCceEECCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCC
Confidence 999999999999999875 78877766 999999999999999999999999999864 7899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 043412 364 PETVAGIVTDHIKDILS 380 (383)
Q Consensus 364 ~~~~~~~~~~~~~~~~~ 380 (383)
|+.+++++.++|.+++.
T Consensus 388 w~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 388 WAATADGLLSSYRDALA 404 (405)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=300.34 Aligned_cols=241 Identities=18% Similarity=0.185 Sum_probs=181.8
Q ss_pred hcCCCCEEEEeChHHHHHHHhc----------CCCCCCeEEecCCCcCCCCCCCCCCCCcccc---------CCcccccc
Q 043412 121 RCNRMDFVWVPTDFHVSTFIRS----------GVDPAKVVKIVQPVHVGFFDPVNCDPIDLAS---------IGKPVLGL 181 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~~----------~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~---------~~~~~l~~ 181 (383)
.+..||.|+++|+..++.+... +.+++|+.+|+||+|.+.|.|.......... ..+..+ .
T Consensus 194 ~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l-~ 272 (466)
T PRK00654 194 GLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRAL-Q 272 (466)
T ss_pred HHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHH-H
Confidence 4688999999999999888652 2346799999999999998875432110000 000000 0
Q ss_pred CCCCCC-CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--------C
Q 043412 182 SNMNTS-SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--------K 252 (383)
Q Consensus 182 ~~~~~~-~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~ 252 (383)
..++++ ++.++++++||+.++||++.+++|++++.++ +++|+++|+|+ ..+.+.+++++++++.. +
T Consensus 273 ~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~---~~~~~~l~~l~~~~~~~v~~~~g~~~ 347 (466)
T PRK00654 273 ERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGD---PELEEAFRALAARYPGKVGVQIGYDE 347 (466)
T ss_pred HHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCc---HHHHHHHHHHHHHCCCcEEEEEeCCH
Confidence 112233 3678999999999999999999999998764 79999999873 24556777777765432 2
Q ss_pred c-cccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHH
Q 043412 253 P-DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVD 331 (383)
Q Consensus 253 ~-v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 331 (383)
+ +..+|+.||++++||.+|+||++++|||+||+|+|+++.||..|++.+++.. .+..+|+++++.|++
T Consensus 348 ~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~-----------~~~~~G~lv~~~d~~ 416 (466)
T PRK00654 348 ALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE-----------DGEATGFVFDDFNAE 416 (466)
T ss_pred HHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC-----------CCCCceEEeCCCCHH
Confidence 2 3578899999999999999999999999999999999999999988653100 111234444445999
Q ss_pred HHHHHHHHHhc---CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 332 KLRALMRLVVS---NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 332 ~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
+++++|.++++ +++.+.+|++++. .+.|||+.+++++.++|++++++
T Consensus 417 ~la~~i~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~~~~ 466 (466)
T PRK00654 417 DLLRALRRALELYRQPPLWRALQRQAM---AQDFSWDKSAEEYLELYRRLLGK 466 (466)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCChHHHHHHHHHHHHHHhhC
Confidence 99999999876 7777888888875 47899999999999999998753
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=297.23 Aligned_cols=242 Identities=15% Similarity=0.182 Sum_probs=182.6
Q ss_pred HHhcCCCCEEEEeChHHHHHHHhc--C--------CCCCCeEEecCCCcCCCCCCCCCCCCc---------------ccc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIRS--G--------VDPAKVVKIVQPVHVGFFDPVNCDPID---------------LAS 173 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~~--~--------~~~~~i~vi~ngid~~~~~~~~~~~~~---------------~~~ 173 (383)
+..+..||.|+++|+..++.+... | .+.+++.+|+||+|.+.|.|....... ...
T Consensus 204 k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 204 KAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred HHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 344789999999999999988752 2 236799999999999988876432110 001
Q ss_pred CCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-----
Q 043412 174 IGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS----- 248 (383)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~----- 248 (383)
+.++++. ..++.++++++||+.++||++.+++|+..+.++ +++|+++|+|+ .++.+.++++++.+
T Consensus 284 ~~~~gl~-----~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~~~lvivG~G~---~~~~~~l~~l~~~~~~~v~ 353 (485)
T PRK14099 284 QARFGLD-----PDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--GAQLALLGSGD---AELEARFRAAAQAYPGQIG 353 (485)
T ss_pred HHHcCCC-----cccCCcEEEEEecCCccccHHHHHHHHHHHHhc--CcEEEEEecCC---HHHHHHHHHHHHHCCCCEE
Confidence 1122221 124578999999999999999999999988653 78999999873 23556676666553
Q ss_pred ---CCCCcccccc-ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCccc
Q 043412 249 ---DLEKPDDGWA-PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHF 324 (383)
Q Consensus 249 ---~~~~~v~~~~-~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~ 324 (383)
|..+++..++ +.||++++||.+|+||++.+|||+||+|+|++++||..|++.+.+...- ..+..+|++
T Consensus 354 ~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~--------~~~~~~G~l 425 (485)
T PRK14099 354 VVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAI--------ATGVATGVQ 425 (485)
T ss_pred EEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccccc--------ccCCCceEE
Confidence 3345666665 6799999999999999999999999998888999999998865310000 000124555
Q ss_pred ccCCCHHHHHHHHHH---HhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 325 WAEPSVDKLRALMRL---VVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 325 ~~~~~~~~la~~i~~---ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
+++.|+++++++|.+ +++|++.+++|+++++ .++|||+++++++.++|++++.+
T Consensus 426 ~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 426 FSPVTADALAAALRKTAALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred eCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHHHhh
Confidence 555599999999997 6789999999999986 47899999999999999998764
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=285.33 Aligned_cols=334 Identities=16% Similarity=0.143 Sum_probs=239.9
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCC-c-ccc---hh----hcCC-----ChhhhhHHHHHHhhhcCCCccEE
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGD-L-QSL---QF----WEGL-----PHHMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~-~-~~~---~~----~~~~-----~~~~~~~~~~l~~~~~~~~pDiV 72 (383)
.||.++++.+++++|.++|+...+. +...+. . ... .. .... +.........+.+++++.+||+|
T Consensus 11 ~gG~~~~~~~la~~L~~~G~~v~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~div 88 (371)
T cd04962 11 YGGSGVVATELGKALARRGHEVHFI--TSSRPFRLDEYSPNIFFHEVEVPQYPLFQYPPYDLALASKIAEVAKRYKLDLL 88 (371)
T ss_pred CCCccchHHHHHHHHHhcCCceEEE--ecCCCcchhhhccCeEEEEecccccchhhcchhHHHHHHHHHHHHhcCCccEE
Confidence 5999999999999999999876542 221110 0 000 00 0011 11122345677788889999999
Q ss_pred EecCCCCCCCCcccccCCCCCCCCCCCcccccceeee---ecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCe
Q 043412 73 ICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMF---ETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKV 149 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i 149 (383)
|+|...+......+........ ..+.+...++.... ............++++|.++++|+..++.+.+.+....++
T Consensus 89 h~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i 167 (371)
T cd04962 89 HVHYAVPHAVAAYLAREILGKK-DLPVVTTLHGTDITLVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYELFDITKEI 167 (371)
T ss_pred eecccCCccHHHHHHHHhcCcC-CCcEEEEEcCCccccccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHhcCCcCCE
Confidence 9996543222212111111000 11112222221111 0111222333447899999999999999988754456789
Q ss_pred EEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeC
Q 043412 150 VKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTN 229 (383)
Q Consensus 150 ~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~ 229 (383)
.+||||+|...+.+...... ..+.+ ..++.++++++|++.+.||++.+++++.++.++ ++++++++|.
T Consensus 168 ~vi~n~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-~~~~l~i~G~ 235 (371)
T cd04962 168 EVIPNFVDEDRFRPKPDEAL----KRRLG-------APEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-VPARLLLVGD 235 (371)
T ss_pred EEecCCcCHhhcCCCchHHH----HHhcC-------CCCCCeEEEEecccccccCHHHHHHHHHHHHhc-CCceEEEEcC
Confidence 99999999876654332110 11122 346788999999999999999999999988765 5689999998
Q ss_pred CCCCCCchHHHHHHHHhhCCCC---------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccc
Q 043412 230 PYHSGRDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT 300 (383)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~ 300 (383)
| ...+.+++.+...++. +++..+++.||++++||..|++|++++|||++|+|||+|+.++..|++.
T Consensus 236 g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~ 310 (371)
T cd04962 236 G-----PERSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVK 310 (371)
T ss_pred C-----cCHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhc
Confidence 8 3345666666666543 5678899999999999999999999999999999999999999999998
Q ss_pred CC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 301 EE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 301 ~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
++ +|++++++ |++++++++.++++|++.+.+|++++++.+.++|||+.+++++.++|+++
T Consensus 311 ~~~~G~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 311 HGETGFLVDVG------------------DVEAMAEYALSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred CCCceEEcCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 85 88888776 99999999999999999999999999998889999999999999999863
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=304.11 Aligned_cols=364 Identities=15% Similarity=0.086 Sum_probs=239.7
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCc--------c----------------------cchhhc---
Q 043412 1 MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDL--------Q----------------------SLQFWE--- 47 (383)
Q Consensus 1 ~~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~--------~----------------------~~~~~~--- 47 (383)
|+||...||.+.++.+|.++|++.|+.+.+ .+...+.. . ..-++.
T Consensus 597 ~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~V--itP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~GV~vyfl~~~~ 674 (1036)
T PLN02316 597 MAPIAKVGGLGDVVTSLSRAVQDLNHNVDI--ILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEGLSVYFLEPQN 674 (1036)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCEEEE--EecCCcccchhhcccceEEEEeccCCEEEEEEEEEECCcEEEEEeccc
Confidence 689999999999999999999999984332 22211100 0 000000
Q ss_pred CC---------ChhhhhH---HHHHHhhhc--CCCccEEEecCCCCCCCCcccccCCC-CCCCCCCCcccccceeeeecC
Q 043412 48 GL---------PHHMRNL---AVELYNTEC--RTNETVVICHSEPGAWYPPLFDTLPC-PPTPGYGDFMAVIGRTMFETD 112 (383)
Q Consensus 48 ~~---------~~~~~~~---~~~l~~~~~--~~~pDiV~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 112 (383)
.+ +....++ -.....+++ ..+|||||||++..++.+.++..... ......+.+.+.|+.. +
T Consensus 675 ~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-~--- 750 (1036)
T PLN02316 675 GMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-F--- 750 (1036)
T ss_pred cccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-c---
Confidence 00 0000000 011222222 35899999998766554444332111 0000111223333211 0
Q ss_pred CCCHHHHHhcCCCCEEEEeChHHHHHHHhcC-CC--CCCeEEecCCCcCCCCCCCCCCCCccc----------cCCcccc
Q 043412 113 RVSPEHVKRCNRMDFVWVPTDFHVSTFIRSG-VD--PAKVVKIVQPVHVGFFDPVNCDPIDLA----------SIGKPVL 179 (383)
Q Consensus 113 ~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~-~~--~~~i~vi~ngid~~~~~~~~~~~~~~~----------~~~~~~l 179 (383)
........+..+|.|+++|+.+++.+...+ +. ..++.+|+||||.+.|.|......... ...+..+
T Consensus 751 -~~n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~L 829 (1036)
T PLN02316 751 -GANHIGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEAL 829 (1036)
T ss_pred -chhHHHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHH
Confidence 111233456889999999999999887743 32 479999999999998877543211100 0000000
Q ss_pred ccCCCCCC-CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Ccc--
Q 043412 180 GLSNMNTS-SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPD-- 254 (383)
Q Consensus 180 ~~~~~~~~-~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v-- 254 (383)
...++++ ++.++++++||+.++||++.+++|+.++.+ ++++|+|+|+|+. ..+...+++++..+++. +.+
T Consensus 830 -r~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd--~~~e~~l~~La~~Lg~~~~~rV~f 904 (1036)
T PLN02316 830 -QQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPD--PRIQNDFVNLANQLHSSHHDRARL 904 (1036)
T ss_pred -HHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCC--HHHHHHHHHHHHHhCccCCCeEEE
Confidence 0122234 367999999999999999999999999865 4799999999842 34567788888876542 222
Q ss_pred ---------ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccc
Q 043412 255 ---------DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFW 325 (383)
Q Consensus 255 ---------~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~ 325 (383)
..+|+.||++|+||++|+||++.+|||+||+|+|++++||++|+|.+.+...-. ......+.+|+++
T Consensus 905 ~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~----~~~~g~~~tGflf 980 (1036)
T PLN02316 905 CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKER----AQAQGLEPNGFSF 980 (1036)
T ss_pred EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccc----ccccccCCceEEe
Confidence 258999999999999999999999999999999999999999999773110000 0000012456666
Q ss_pred cCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 326 AEPSVDKLRALMRLVVSN-VDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 326 ~~~~~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++.|+++++.+|.+++.+ ++....++..+++.+.+.|||+.++++|.++|+++.+
T Consensus 981 ~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 981 DGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSARK 1036 (1036)
T ss_pred CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence 667999999999999986 4556667888888888899999999999999998763
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=296.58 Aligned_cols=338 Identities=17% Similarity=0.206 Sum_probs=237.0
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccc---hh--hcC--CCh-----hhhhHHHHHHhhhcCCCc
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSL---QF--WEG--LPH-----HMRNLAVELYNTECRTNE 69 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---~~--~~~--~~~-----~~~~~~~~l~~~~~~~~p 69 (383)
+||-..||.+.+..+++++|.+.|+...+ .+...+..... .. ... .+. ........+.+++++.+|
T Consensus 68 ~~~~~~gG~~~~~~~l~~~L~~~G~eV~v--lt~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~kp 145 (465)
T PLN02871 68 SPFSYVSGYKNRFQNFIRYLREMGDEVLV--VTTDEGVPQEFHGAKVIGSWSFPCPFYQKVPLSLALSPRIISEVARFKP 145 (465)
T ss_pred cCCcccccHHHHHHHHHHHHHHCCCeEEE--EecCCCCCccccCceeeccCCcCCccCCCceeeccCCHHHHHHHHhCCC
Confidence 46667899999999999999999986543 22222211100 00 000 110 011112357778888999
Q ss_pred cEEEecCCCCCCCCcc-ccc-CCCCCCCCCCCcccc-cceeeeecCCCC-H---HHHHhcCCCCEEEEeChHHHHHHHhc
Q 043412 70 TVVICHSEPGAWYPPL-FDT-LPCPPTPGYGDFMAV-IGRTMFETDRVS-P---EHVKRCNRMDFVWVPTDFHVSTFIRS 142 (383)
Q Consensus 70 DiV~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~ad~vi~~s~~~~~~~~~~ 142 (383)
|+||+|+......... +.. ...+.+..++..... .....+ ..+. . .....++.+|.++++|+..++.+.+.
T Consensus 146 DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~--~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~ 223 (465)
T PLN02871 146 DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTF--SWLVKPMWDIIRFLHRAADLTLVTSPALGKELEAA 223 (465)
T ss_pred CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccc--hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHc
Confidence 9999997533221111 111 122222111111100 000000 0000 0 11223578999999999999999886
Q ss_pred C-CCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCC
Q 043412 143 G-VDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG 221 (383)
Q Consensus 143 ~-~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~ 221 (383)
+ .+.+++.++|||+|.+.|.+....... +.+... ..++.++|+++|++.+.||++.++++++++ ++
T Consensus 224 ~~~~~~kv~vi~nGvd~~~f~p~~~~~~~---~~~~~~------~~~~~~~i~~vGrl~~~K~~~~li~a~~~~----~~ 290 (465)
T PLN02871 224 GVTAANRIRVWNKGVDSESFHPRFRSEEM---RARLSG------GEPEKPLIVYVGRLGAEKNLDFLKRVMERL----PG 290 (465)
T ss_pred CCCCcCeEEEeCCccCccccCCccccHHH---HHHhcC------CCCCCeEEEEeCCCchhhhHHHHHHHHHhC----CC
Confidence 5 346799999999999888764321110 111111 134678899999999999999999998764 68
Q ss_pred eEEEEEeCCCCCCCchHHHHHHHHhhCC-----CC--CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC
Q 043412 222 VVLYLLTNPYHSGRDFGNKIVNFVEDSD-----LE--KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG 294 (383)
Q Consensus 222 ~~l~i~G~~~~~~~~~~~~~~~~~~~~~-----~~--~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g 294 (383)
++|+|+|+| ++.+.++++++..+ .. +++..+|+.||++|+||..|++|++++|||+||+|||+++.+|
T Consensus 291 ~~l~ivG~G-----~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg 365 (465)
T PLN02871 291 ARLAFVGDG-----PYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGG 365 (465)
T ss_pred cEEEEEeCC-----hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCC
Confidence 999999987 55677777766543 32 5788999999999999999999999999999999999999999
Q ss_pred ccccccC---C-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 295 PTEYLTE---E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 295 ~~e~v~~---~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
..|++++ + +|++++++ |+++++++|.++++|++.+++|++++++.+ ++|||+.++++
T Consensus 366 ~~eiv~~~~~~~~G~lv~~~------------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~-~~fsw~~~a~~ 426 (465)
T PLN02871 366 IPDIIPPDQEGKTGFLYTPG------------------DVDDCVEKLETLLADPELRERMGAAAREEV-EKWDWRAATRK 426 (465)
T ss_pred cHhhhhcCCCCCceEEeCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HhCCHHHHHHH
Confidence 9999987 4 77777766 999999999999999999999999999975 68999999999
Q ss_pred HHH-HHHHHHh
Q 043412 371 VTD-HIKDILS 380 (383)
Q Consensus 371 ~~~-~~~~~~~ 380 (383)
+.+ .|++++.
T Consensus 427 l~~~~Y~~~~~ 437 (465)
T PLN02871 427 LRNEQYSAAIW 437 (465)
T ss_pred HHHHHHHHHHH
Confidence 998 7988764
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=293.94 Aligned_cols=231 Identities=17% Similarity=0.211 Sum_probs=175.8
Q ss_pred hcCCCCEEEEeChHHHH-HHHhc-CCCCCCeEEecCCCcCCCCCCCCCCCCcccc---CCccccccCCCCCCCCcEEEEE
Q 043412 121 RCNRMDFVWVPTDFHVS-TFIRS-GVDPAKVVKIVQPVHVGFFDPVNCDPIDLAS---IGKPVLGLSNMNTSSKEFVFLS 195 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~-~~~~~-~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~i~~ 195 (383)
.++.+|.|+++|+.... .+..+ +++++++.+||||+|.+.|.+.......... ..+.. ..++.+++++
T Consensus 181 ~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~ 253 (439)
T TIGR02472 181 TLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFL-------KDPEKPPILA 253 (439)
T ss_pred HHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhc-------cccCCcEEEE
Confidence 46889999999976543 34443 6778899999999999988765432111000 01111 2456789999
Q ss_pred eeccccccCHHHHHHHHHHHhccCCCeEEE-EEeCCCCCCC------chHHHHHHHHhhCCCCC-----------ccccc
Q 043412 196 VFKWEYRKGWDVLLKAYLEEFSKADGVVLY-LLTNPYHSGR------DFGNKIVNFVEDSDLEK-----------PDDGW 257 (383)
Q Consensus 196 ~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~-i~G~~~~~~~------~~~~~~~~~~~~~~~~~-----------~v~~~ 257 (383)
+||+.+.||++.+++|++.+....++.+++ ++|+++.... .+.+.+.++++++++.+ ++..+
T Consensus 254 vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~ 333 (439)
T TIGR02472 254 ISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPEL 333 (439)
T ss_pred EcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHH
Confidence 999999999999999998642211223333 5676632111 12234555666666643 45567
Q ss_pred cccC----ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHH
Q 043412 258 APAA----DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 258 ~~~a----di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
|+.| |++|+||.+|+||++++|||+||+|||+|+.+|..|++.++ +|++++++ |+++
T Consensus 334 ~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~------------------d~~~ 395 (439)
T TIGR02472 334 YRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVL------------------DLEA 395 (439)
T ss_pred HHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCC------------------CHHH
Confidence 7766 99999999999999999999999999999999999999885 88888777 9999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 333 LRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++++|.++++|++.+++|++++++++.++|||+.++++|.++++
T Consensus 396 la~~i~~ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 396 IASALEDALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999998763
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=296.48 Aligned_cols=245 Identities=13% Similarity=0.102 Sum_probs=186.8
Q ss_pred hcCCCCEEEEeChHHHHHHHh---------cCCCCCCeEEecCCCcCCCCCCCCCCCCcccc---------CCccccccC
Q 043412 121 RCNRMDFVWVPTDFHVSTFIR---------SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLAS---------IGKPVLGLS 182 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~---------~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~---------~~~~~l~~~ 182 (383)
.+..||.|+++|+.+++.+.. ++....++.+|+||||.+.|.|.......... ..+..+ ..
T Consensus 690 GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aL-Rk 768 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAAL-RK 768 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHH-HH
Confidence 356799999999999998764 23456799999999999999886532110000 000000 01
Q ss_pred CCCCC---CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCcc-----
Q 043412 183 NMNTS---SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPD----- 254 (383)
Q Consensus 183 ~~~~~---~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v----- 254 (383)
.++++ ++.++|+++||+.++||++.+++|+..+.. ++++|+|+|+|+. ..+...++.++..++..+++
T Consensus 769 elGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~--~~~e~eL~~La~~l~l~drV~FlG~ 844 (977)
T PLN02939 769 QLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPV--PHIQREFEGIADQFQSNNNIRLILK 844 (977)
T ss_pred HhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCc--HHHHHHHHHHHHHcCCCCeEEEEec
Confidence 23344 357899999999999999999999988864 4799999999842 24557777888777654333
Q ss_pred ------ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCC
Q 043412 255 ------DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 255 ------~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
..+|+.||+|++||++|+||++++|||+||+|+|++++||..|+|.+.++..++ ..+.+|+++++.
T Consensus 845 ~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~--------~eg~NGfLf~~~ 916 (977)
T PLN02939 845 YDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIP--------VELRNGFTFLTP 916 (977)
T ss_pred cCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccc--------cCCCceEEecCC
Confidence 358899999999999999999999999999999999999999998763221111 112456666666
Q ss_pred CHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 329 SVDKLRALMRLVVS----NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 329 ~~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
|+++++++|.+++. |++.+.+|++++. .+.|||+.++++|.++|++++.+
T Consensus 917 D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 917 DEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHh
Confidence 99999999998775 7999999988763 47899999999999999998764
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=285.29 Aligned_cols=295 Identities=17% Similarity=0.177 Sum_probs=215.7
Q ss_pred hhcCCChhhhhHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCccc-ccceeeeec--CC-CCHHHH-
Q 043412 45 FWEGLPHHMRNLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMA-VIGRTMFET--DR-VSPEHV- 119 (383)
Q Consensus 45 ~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~-~~~~~~- 119 (383)
++..+|.........+..++++.+||+||+|...+.......+.....++ ... .++ .+.. .+ ....|.
T Consensus 257 ~~~~~~~~~~~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpv-----iv~~~h~--~~~~~~~r~~~~e~~~ 329 (578)
T PRK15490 257 LLSHLPPVCKYGIKHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPR-----IQLGLRG--LPPVVRKRLFKPEYEP 329 (578)
T ss_pred HHhcCChHHHHHHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCE-----EEEeecc--cCCcchhhHHHHHHHH
Confidence 44456655566678888999999999999997554222111111111111 111 111 1100 01 001111
Q ss_pred -H---h-cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEE
Q 043412 120 -K---R-CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVF 193 (383)
Q Consensus 120 -~---~-~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i 193 (383)
. . ...+| +++.|...++.+.+ ++++++++.+||||+|...|.+........ +.....+ ++++.+++
T Consensus 330 ~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~--r~~~~~~-----l~~~~~vI 401 (578)
T PRK15490 330 LYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKI--WQQFTQK-----TQDADTTI 401 (578)
T ss_pred hhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHH--HHHhhhc-----cCCCCcEE
Confidence 1 1 34455 77888888898877 689999999999999998877654211000 0111111 23556789
Q ss_pred EEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---------CccccccccCceE
Q 043412 194 LSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---------KPDDGWAPAADVF 264 (383)
Q Consensus 194 ~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~ 264 (383)
+++||+.+.||...+++++.++.++.|+++|+++|+| +..++++++++++++. +++..+|+.+|++
T Consensus 402 g~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG-----~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVf 476 (578)
T PRK15490 402 GGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDG-----DLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVF 476 (578)
T ss_pred EEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCc-----hhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEE
Confidence 9999999999999999999998888899999999988 5577888888887765 4567889999999
Q ss_pred EecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHH---HHH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM---RLV 340 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i---~~l 340 (383)
++||.+||||++++|||+||+|||+|+.+|..|++.++ +|++++++ |++++++++ ..+
T Consensus 477 VlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~------------------D~~aLa~ai~lA~aL 538 (578)
T PRK15490 477 ILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDA------------------QTVNLDQACRYAEKL 538 (578)
T ss_pred EEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCC------------------ChhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999886 88888876 888887776 444
Q ss_pred hcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 341 VSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 341 l~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
..+.+.+..|++++++++.++|||+.++++|.++|..
T Consensus 539 ~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 539 VNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 5555556679999999999999999999999999874
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=292.41 Aligned_cols=239 Identities=18% Similarity=0.150 Sum_probs=181.1
Q ss_pred HhcCCCCEEEEeChHHHHHHHh--cC--------CCCCCeEEecCCCcCCCCCCCCCCCCccc---------cCCccccc
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIR--SG--------VDPAKVVKIVQPVHVGFFDPVNCDPIDLA---------SIGKPVLG 180 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~--~~--------~~~~~i~vi~ngid~~~~~~~~~~~~~~~---------~~~~~~l~ 180 (383)
..+..||.|+++|+..++.+.. ++ .++.++.+|+||+|.+.|.|......... ...+..+
T Consensus 201 ~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l- 279 (473)
T TIGR02095 201 GGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEAL- 279 (473)
T ss_pred HHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHH-
Confidence 3478999999999999988764 22 13569999999999998887543211100 0000000
Q ss_pred cCCCCCCC--CcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-------
Q 043412 181 LSNMNTSS--KEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------- 251 (383)
Q Consensus 181 ~~~~~~~~--~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------- 251 (383)
..+++++. +.++++++||+.++||++.+++|+.++.++ +++|+|+|+|+ +.+.+.+++++.+.+..
T Consensus 280 ~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~---~~~~~~l~~~~~~~~~~v~~~~~~ 354 (473)
T TIGR02095 280 QEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGD---PELEEALRELAERYPGNVRVIIGY 354 (473)
T ss_pred HHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCC---HHHHHHHHHHHHHCCCcEEEEEcC
Confidence 01222333 789999999999999999999999998754 59999999873 24567777777655421
Q ss_pred --CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCC
Q 043412 252 --KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 252 --~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
+.+..+|+.||++++||.+|+||++++|||+||+|+|+++.+|..|++.+++.. ..+.+|+++++.|
T Consensus 355 ~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~-----------~~~~~G~l~~~~d 423 (473)
T TIGR02095 355 DEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPE-----------AESGTGFLFEEYD 423 (473)
T ss_pred CHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCC-----------CCCCceEEeCCCC
Confidence 224578999999999999999999999999999999999999999999873110 0112344444449
Q ss_pred HHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 330 VDKLRALMRLVVS----NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 330 ~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
+++++++|.+++. |++.+++|++++. .+.|||++++++|.++|+++
T Consensus 424 ~~~la~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 424 PGALLAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHHHHHHHHHHHhC
Confidence 9999999999888 8999999998875 46899999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=287.96 Aligned_cols=228 Identities=17% Similarity=0.132 Sum_probs=191.0
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
++++|.++++|+..++.+.+.+.++.++.+||||+|.+.+.+..... ....+.+++ ++++.++++++|++.+
T Consensus 169 ~~~ad~ii~~S~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~i~~~G~l~~ 240 (412)
T PRK10307 169 LRRFDNVSTISRSMMNKAREKGVAAEKVIFFPNWSEVARFQPVADAD-VDALRAQLG-------LPDGKKIVLYSGNIGE 240 (412)
T ss_pred HhhCCEEEecCHHHHHHHHHcCCCcccEEEECCCcCHhhcCCCCccc-hHHHHHHcC-------CCCCCEEEEEcCcccc
Confidence 68899999999999999988888888999999999998776543211 001111222 3567899999999999
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC----------CccccccccCceEEecCCCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE----------KPDDGWAPAADVFVLPSRGE 271 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~adi~v~ps~~e 271 (383)
.||++.+++|++++. +.++++|+|+|+| +..+.++++++.+++. +++..+++.||++++||..|
T Consensus 241 ~kg~~~li~a~~~l~-~~~~~~l~ivG~g-----~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e 314 (412)
T PRK10307 241 KQGLELVIDAARRLR-DRPDLIFVICGQG-----GGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMADCHLLPQKAG 314 (412)
T ss_pred ccCHHHHHHHHHHhc-cCCCeEEEEECCC-----hhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhcCEeEEeeccC
Confidence 999999999998874 4688999999988 4467777777766553 34567889999999999988
Q ss_pred C----CChHHHHHHHcCCCEEEcCCCC--ccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHH
Q 043412 272 G----WGRPLVEAMSMGLPVIATNWSG--PTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVD 345 (383)
Q Consensus 272 ~----~~~~~~Ea~a~G~PvI~~~~~g--~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~ 345 (383)
+ +|.+++|||+||+|||+|+.+| ..+++. ++|++++++ |+++++++|.++++|++
T Consensus 315 ~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~-~~G~~~~~~------------------d~~~la~~i~~l~~~~~ 375 (412)
T PRK10307 315 AADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE-GIGVCVEPE------------------SVEALVAAIAALARQAL 375 (412)
T ss_pred cccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh-CCcEEeCCC------------------CHHHHHHHHHHHHhCHH
Confidence 7 5778999999999999999876 457777 788888776 99999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 346 EAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 346 ~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
.+.+|++++++.+.++|||+.+++++.++|++++.++
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 412 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAER 412 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCC
Confidence 9999999999998899999999999999999998764
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=291.00 Aligned_cols=290 Identities=16% Similarity=0.127 Sum_probs=211.4
Q ss_pred hhhHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCC-CCCCCCCCCcccccceeeee-cCCCCHHHH---Hhc--CCC
Q 043412 53 MRNLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLP-CPPTPGYGDFMAVIGRTMFE-TDRVSPEHV---KRC--NRM 125 (383)
Q Consensus 53 ~~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~--~~a 125 (383)
.....+.+.+++++++|||||+|+....++..+..... .+.+ +...++..... ..++...+. ..+ ..+
T Consensus 385 ~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvPvI-----v~t~h~~~~~~~~~~~~~~~~~l~~~l~~~~~ 459 (694)
T PRK15179 385 IIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVPRI-----VLSVRTMPPVDRPDRYRVEYDIIYSELLKMRG 459 (694)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCCEE-----EEEeCCCccccchhHHHHHHHHHHHHHHhcCC
Confidence 34456788899999999999999765533322222111 1111 00111110000 001110111 112 235
Q ss_pred CEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccC
Q 043412 126 DFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKG 204 (383)
Q Consensus 126 d~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~ 204 (383)
+.++++|+..++.+.+ ++++++++.|||||+|...|.+....... ...+... .+++.++|+++||+.+.||
T Consensus 460 ~i~Vs~S~~~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~---~~~~~~~-----~~~~~~vIg~VGRL~~~KG 531 (694)
T PRK15179 460 VALSSNSQFAAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAM---MAQFDAR-----TSDARFTVGTVMRVDDNKR 531 (694)
T ss_pred eEEEeCcHHHHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHH---HHhhccc-----cCCCCeEEEEEEeCCccCC
Confidence 5777778888887766 78888899999999998877543211100 0000000 1345789999999999999
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---------CccccccccCceEEecCCCCCCCh
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
++.+++|+.++.++.|+++|+|+|+| +..+.++++++++++. +++..+|+.+|++++||.+|+||+
T Consensus 532 ~~~LI~A~a~l~~~~p~~~LvIvG~G-----~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~VlpS~~Egfp~ 606 (694)
T PRK15179 532 PFLWVEAAQRFAASHPKVRFIMVGGG-----PLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSRFEGLPN 606 (694)
T ss_pred HHHHHHHHHHHHHHCcCeEEEEEccC-----cchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEEEeccccccchH
Confidence 99999999999888999999999988 4567788888887765 456678999999999999999999
Q ss_pred HHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
+++|||+||+|||+|+.+|..|++.++ +|+++++++ .++++++++|.+++.+......+++++
T Consensus 607 vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d----------------~~~~~La~aL~~ll~~l~~~~~l~~~a 670 (694)
T PRK15179 607 VLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADT----------------VTAPDVAEALARIHDMCAADPGIARKA 670 (694)
T ss_pred HHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCC----------------CChHHHHHHHHHHHhChhccHHHHHHH
Confidence 999999999999999999999999886 888887651 135789999998888766666788899
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++++.++|||+.+++++.++|+
T Consensus 671 r~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 671 ADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHhCCHHHHHHHHHHHhC
Confidence 9998899999999999999985
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=280.58 Aligned_cols=336 Identities=16% Similarity=0.119 Sum_probs=222.8
Q ss_pred CCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccc--h---hhcC----CChhhhhHHHH-----HHhhhcCCC
Q 043412 3 PFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSL--Q---FWEG----LPHHMRNLAVE-----LYNTECRTN 68 (383)
Q Consensus 3 p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~--~---~~~~----~~~~~~~~~~~-----l~~~~~~~~ 68 (383)
+-+..||+++++.++++.|.+.|+...+... ...++.... . ...+ ++......+.. ..+.+...+
T Consensus 7 ~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (372)
T cd03792 7 STPYGGGVAEILHSLVPLMRDLGVDTRWEVI-KGDPEFFNVTKKFHNALQGADIELSEEEKEIYLEWNEENAERPLLDLD 85 (372)
T ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCceEEec-CCChhHHHHHHHhhHhhcCCCCCCCHHHHHHHHHHHHHHhccccccCC
Confidence 4458899999999999999999987765332 111111110 0 0111 22221111111 111234679
Q ss_pred ccEEEecCCCCCCCCcccccC-CCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCC
Q 043412 69 ETVVICHSEPGAWYPPLFDTL-PCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPA 147 (383)
Q Consensus 69 pDiV~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~ 147 (383)
||+||+|+....... .+... ..+. +.+.+.................++++|.+++.|.. +...+++..
T Consensus 86 ~Dvv~~h~~~~~~~~-~~~~~~~~~~------i~~~H~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~----~~~~~~~~~ 154 (372)
T cd03792 86 ADVVVIHDPQPLALP-LFKKKRGRPW------IWRCHIDLSSPNRRVWDFLQPYIEDYDAAVFHLPE----YVPPQVPPR 154 (372)
T ss_pred CCEEEECCCCchhHH-HhhhcCCCeE------EEEeeeecCCCcHHHHHHHHHHHHhCCEEeecHHH----hcCCCCCCc
Confidence 999999976532211 11111 1111 11222111000001111223346889999988832 223345555
Q ss_pred CeEEecCCCcCCCCCCCCCCCC-ccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEE
Q 043412 148 KVVKIVQPVHVGFFDPVNCDPI-DLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL 226 (383)
Q Consensus 148 ~i~vi~ngid~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i 226 (383)
++ ++|||+|............ ....+.++ +++++.++++++||+.+.||++.+++|+..+.++.++++|++
T Consensus 155 ~~-vipngvd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i 226 (372)
T cd03792 155 KV-IIPPSIDPLSGKNRELSPADIEYILEKY-------GIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVL 226 (372)
T ss_pred eE-EeCCCCCCCccccCCCCHHHHHHHHHHh-------CCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEE
Confidence 55 9999999753111111100 00111122 245788999999999999999999999999988889999999
Q ss_pred EeCCCCCCCchHHHHHHHHhhCCCC-------------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 227 LTNPYHSGRDFGNKIVNFVEDSDLE-------------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 227 ~G~~~~~~~~~~~~~~~~~~~~~~~-------------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
+|+|+..+....+.++++.+..+.. +++..+|+.||++++||.+||||++++|||+||+|||+|+.+
T Consensus 227 ~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~ 306 (372)
T cd03792 227 VGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVG 306 (372)
T ss_pred EeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCC
Confidence 9998653333333344444333322 345578899999999999999999999999999999999999
Q ss_pred CccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 294 GPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 294 g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
|..+++.++ +|++++ +.++++++|.++++|++.+++|++++++.+.++|||+.+++++.
T Consensus 307 ~~~~~i~~~~~g~~~~--------------------~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 366 (372)
T cd03792 307 GIPLQIEDGETGFLVD--------------------TVEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYL 366 (372)
T ss_pred CchhhcccCCceEEeC--------------------CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999875 787776 67789999999999999999999999998889999999999999
Q ss_pred HHHHHH
Q 043412 373 DHIKDI 378 (383)
Q Consensus 373 ~~~~~~ 378 (383)
++|+++
T Consensus 367 ~~~~~~ 372 (372)
T cd03792 367 YLISKL 372 (372)
T ss_pred HHHHhC
Confidence 999863
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=288.14 Aligned_cols=239 Identities=15% Similarity=0.167 Sum_probs=180.5
Q ss_pred HhcCCCCEEEEeChHHHHHHHh-----cCCC------CCCeEEecCCCcCCCCCCCCCCCCccccC---------Ccccc
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIR-----SGVD------PAKVVKIVQPVHVGFFDPVNCDPIDLASI---------GKPVL 179 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~-----~~~~------~~~i~vi~ngid~~~~~~~~~~~~~~~~~---------~~~~l 179 (383)
..+..||.|+++|+..++.+.. +|.+ +.++.+|+||+|.+.|.|........... .+..+
T Consensus 216 ~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l 295 (489)
T PRK14098 216 TGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKAL 295 (489)
T ss_pred HHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHH
Confidence 3468899999999999998865 2332 57999999999999998765322111000 00000
Q ss_pred ccCCCCC--CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------
Q 043412 180 GLSNMNT--SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------ 251 (383)
Q Consensus 180 ~~~~~~~--~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------ 251 (383)
...+++ +++.++++++||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.+.++++++.++-.
T Consensus 296 -~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~---~~~~~~l~~l~~~~~~~V~~~g~ 369 (489)
T PRK14098 296 -LEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGD---KEYEKRFQDFAEEHPEQVSVQTE 369 (489)
T ss_pred -HHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCC---HHHHHHHHHHHHHCCCCEEEEEe
Confidence 011222 3567899999999999999999999999875 389999999873 23567788887765421
Q ss_pred ---CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCC
Q 043412 252 ---KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 252 ---~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
+.+..+|+.||++++||.+|+||++.+|||+||+|+|+++.||..|.+.+.. .++.+|+++++.
T Consensus 370 ~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~-------------~~~~~G~l~~~~ 436 (489)
T PRK14098 370 FTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVS-------------EDKGSGFIFHDY 436 (489)
T ss_pred cCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCC-------------CCCCceeEeCCC
Confidence 2346788999999999999999999999999999999999999999886410 001234444444
Q ss_pred CHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 329 SVDKLRALMRLVV---SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 329 ~~~~la~~i~~ll---~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
|+++++++|.+++ +|++.+.++++++ +.+.|||+.++++|.++|+++++
T Consensus 437 d~~~la~ai~~~l~~~~~~~~~~~~~~~~---~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 437 TPEALVAKLGEALALYHDEERWEELVLEA---MERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred CHHHHHHHHHHHHHHHcCHHHHHHHHHHH---hcCCCChHHHHHHHHHHHHHHhc
Confidence 9999999999865 6888888887766 35789999999999999999874
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=275.41 Aligned_cols=227 Identities=19% Similarity=0.250 Sum_probs=186.0
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
+.+++.++++|++.++.+.+.. +..++.+||||+|.+.|.+...... +.+.+ ++++..+++++||+.+
T Consensus 137 ~~~~~~ii~~S~~~~~~~~~~~-~~~~i~vIpngvd~~~~~~~~~~~~----~~~~~-------~~~~~~~il~~Grl~~ 204 (380)
T PRK15484 137 LDKNAKIIVPSQFLKKFYEERL-PNADISIVPNGFCLETYQSNPQPNL----RQQLN-------ISPDETVLLYAGRISP 204 (380)
T ss_pred hccCCEEEEcCHHHHHHHHhhC-CCCCEEEecCCCCHHHcCCcchHHH----HHHhC-------CCCCCeEEEEeccCcc
Confidence 3578999999999999988753 5568999999999887765322110 11122 3456789999999999
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC----CchHHHHHHHHhhCCCC---------CccccccccCceEEecC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG----RDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPS 268 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~----~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps 268 (383)
.||++.+++|+..+.++.|+++|+++|+++... ..+.+.+++++..++.. +++..+|+.||++++||
T Consensus 205 ~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~~~~aDv~v~pS 284 (380)
T PRK15484 205 DKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNYYPLADLVVVPS 284 (380)
T ss_pred ccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHhCCEEEeCC
Confidence 999999999999998889999999999885421 23445566666554421 46788999999999999
Q ss_pred CC-CCCChHHHHHHHcCCCEEEcCCCCccccccCC-Ccee-eecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHH
Q 043412 269 RG-EGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYP-LLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVD 345 (383)
Q Consensus 269 ~~-e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~-~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~ 345 (383)
.+ |+||++++|||+||+|||+|+.+|..|++.++ +|++ +++. |+++++++|.++++|++
T Consensus 285 ~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~------------------d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 285 QVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPM------------------TSDSIISDINRTLADPE 346 (380)
T ss_pred CCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCC------------------CHHHHHHHHHHHHcCHH
Confidence 75 99999999999999999999999999999886 8874 4555 99999999999999998
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 346 EAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 346 ~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
. .+|++++++.+.++|||+.+++++.++|++..
T Consensus 347 ~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 347 L-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred H-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 5 77999999998999999999999999998754
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=277.27 Aligned_cols=327 Identities=21% Similarity=0.185 Sum_probs=236.1
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccc-----------hhhcCCChhhhhHHHHHHhhhcCCCcc
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSL-----------QFWEGLPHHMRNLAVELYNTECRTNET 70 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~pD 70 (383)
-|-++.||.++++.++++.|.++|+...+ ... .+..... .....-+.........+.+.+++.+||
T Consensus 4 ~~~~~~gG~e~~~~~l~~~L~~~g~~v~v--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d 80 (355)
T cd03819 4 LPALESGGVERGTLELARALVERGHRSLV--ASA-GGRLVAELEAEGSRHIKLPFISKNPLRILLNVARLRRLIREEKVD 80 (355)
T ss_pred chhhccCcHHHHHHHHHHHHHHcCCEEEE--EcC-CCchHHHHHhcCCeEEEccccccchhhhHHHHHHHHHHHHHcCCC
Confidence 47788999999999999999999976543 221 1111000 000001112233456677788899999
Q ss_pred EEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCCe
Q 043412 71 VVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAKV 149 (383)
Q Consensus 71 iV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i 149 (383)
+||+|+....|...+...... .+.+...++.+.. ...+...++++|.++++|+..++.+.+ ++.+.+++
T Consensus 81 ii~~~~~~~~~~~~~~~~~~~-----~~~i~~~h~~~~~-----~~~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~~~k~ 150 (355)
T cd03819 81 IVHARSRAPAWSAYLAARRTR-----PPFVTTVHGFYSV-----NFRYNAIMARGDRVIAVSNFIADHIRENYGVDPDRI 150 (355)
T ss_pred EEEECCCchhHHHHHHHHhcC-----CCEEEEeCCchhh-----HHHHHHHHHhcCEEEEeCHHHHHHHHHhcCCChhhE
Confidence 999997655443322221111 1112222332211 113344568899999999999999985 88888899
Q ss_pred EEecCCCcCCCCCCCCCCCCccc-cCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEe
Q 043412 150 VKIVQPVHVGFFDPVNCDPIDLA-SIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLT 228 (383)
Q Consensus 150 ~vi~ngid~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G 228 (383)
.+||||+|...+.+......... .+.+.. .+++.++++++|++.+.||++.+++++..+.++.++++++++|
T Consensus 151 ~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG 223 (355)
T cd03819 151 RVIPRGVDLDRFDPGAVPPERILALAREWP-------LPKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVG 223 (355)
T ss_pred EEecCCccccccCccccchHHHHHHHHHcC-------CCCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 99999999987765432111000 011111 2467889999999999999999999999998888899999999
Q ss_pred CCCCCCCchHHHHHHHHhhCC---------CCCccccccccCceEEecC-CCCCCChHHHHHHHcCCCEEEcCCCCcccc
Q 043412 229 NPYHSGRDFGNKIVNFVEDSD---------LEKPDDGWAPAADVFVLPS-RGEGWGRPLVEAMSMGLPVIATNWSGPTEY 298 (383)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~adi~v~ps-~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~ 298 (383)
.+... ..+.+.+.+.+.+++ ..+++..+++.||++++|| ..|++|++++|||+||+|||+++.++..|+
T Consensus 224 ~~~~~-~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~ 302 (355)
T cd03819 224 DAQGR-RFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARET 302 (355)
T ss_pred CCccc-chHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHH
Confidence 88532 234444544555444 3467788999999999999 799999999999999999999999999999
Q ss_pred ccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHhcCCHHHH
Q 043412 299 LTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV-SNVDEAKAKGKQAREDMIQRFSPETV 367 (383)
Q Consensus 299 v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll-~~~~~~~~~~~~a~~~~~~~~s~~~~ 367 (383)
+.++ +|++++++ |+++++++|..++ .+++.+.+|+++|++.+.++|+|+.+
T Consensus 303 i~~~~~g~~~~~~------------------~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 303 VRPGETGLLVPPG------------------DAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred HhCCCceEEeCCC------------------CHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 9886 88888776 9999999996555 48999999999999999999999863
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=279.93 Aligned_cols=226 Identities=20% Similarity=0.206 Sum_probs=186.6
Q ss_pred hcCCCCEEEEeChHHHHHHHh-c-CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec
Q 043412 121 RCNRMDFVWVPTDFHVSTFIR-S-GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~-~-~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
.++.+|.++++|+..++.+.+ + +.++.++.+||||+|.+.+.+..... ...+.+ ++++.++++++||
T Consensus 141 ~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~~~~~----~~~~~~-------~~~~~~~i~~~Gr 209 (388)
T TIGR02149 141 AIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPDDGNV----VLDRYG-------IDRSRPYILFVGR 209 (388)
T ss_pred HHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCCchHH----HHHHhC-------CCCCceEEEEEcc
Confidence 378999999999999998887 4 56677999999999988776532211 011222 3567889999999
Q ss_pred cccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-------------CCccccccccCceEE
Q 043412 199 WEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-------------EKPDDGWAPAADVFV 265 (383)
Q Consensus 199 ~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~adi~v 265 (383)
+.+.||++.+++|++++. ++++++++|++.. ..++.+.+++.+..++. .+++..+|+.||+++
T Consensus 210 l~~~Kg~~~li~a~~~l~---~~~~l~i~g~g~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v 285 (388)
T TIGR02149 210 ITRQKGVPHLLDAVHYIP---KDVQVVLCAGAPD-TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAEVFV 285 (388)
T ss_pred cccccCHHHHHHHHHHHh---hcCcEEEEeCCCC-cHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCCEEE
Confidence 999999999999999874 4788999887643 22345566665554433 145678899999999
Q ss_pred ecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCH------HHHHHHHH
Q 043412 266 LPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSV------DKLRALMR 338 (383)
Q Consensus 266 ~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~------~~la~~i~ 338 (383)
+||..|++|++++|||+||+|||+|+.++..|++.++ +|++++++ |+ ++++++|.
T Consensus 286 ~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~------------------~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 286 CPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPD------------------NSDADGFQAELAKAIN 347 (388)
T ss_pred eCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCC------------------CCcccchHHHHHHHHH
Confidence 9999999999999999999999999999999999885 88888765 66 99999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 339 LVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 339 ~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
++++|++.+++|++++++.+.++|||+.+++++.++|++++
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999998899999999999999999864
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=274.25 Aligned_cols=336 Identities=21% Similarity=0.214 Sum_probs=240.4
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCC---------hhhhhHHHHHHhhhcCCCccEE
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLP---------HHMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~~~~pDiV 72 (383)
.|-+.+||.+..+.++++.|.+.|+...+.. ....+...+...-.+.+ .........+.+++++.+||+|
T Consensus 6 ~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~-~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~div 84 (365)
T cd03807 6 ITGLDVGGAERMLVRLLKGLDRDRFEHVVIS-LTDRGELGEELEEAGVPVYCLGKRPGRPDPGALLRLYKLIRRLRPDVV 84 (365)
T ss_pred EeeccCccHHHHHHHHHHHhhhccceEEEEe-cCcchhhhHHHHhcCCeEEEEecccccccHHHHHHHHHHHHhhCCCEE
Confidence 4566789999999999999988877544322 22211111000000111 1233455677888889999999
Q ss_pred EecCCCCCCCCcccccC-CCCCCCCCCCcccccceeeee---cCCCCHH-HHHhcCCCCEEEEeChHHHHHHHhcCCCCC
Q 043412 73 ICHSEPGAWYPPLFDTL-PCPPTPGYGDFMAVIGRTMFE---TDRVSPE-HVKRCNRMDFVWVPTDFHVSTFIRSGVDPA 147 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~ 147 (383)
|+|.....+........ ..... +...++..... ....... .....+.+|.++++|+..++.+.+.+.+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~ 159 (365)
T cd03807 85 HTWMYHADLYGGLAARLAGVPPV-----IWGIRHSDLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAIGYPPK 159 (365)
T ss_pred EeccccccHHHHHHHHhcCCCcE-----EEEecCCcccccchhHhHHHHHHHHhccccCeEEeccHHHHHHHHHcCCChh
Confidence 99965433222121111 11111 11112211110 0111111 122257789999999999999999888888
Q ss_pred CeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEE
Q 043412 148 KVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLL 227 (383)
Q Consensus 148 ~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~ 227 (383)
++.++|||+|...+.+........ +.++ +++++.++++++|++.+.||++.+++++..+.++.++++|+++
T Consensus 160 ~~~vi~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~ 230 (365)
T cd03807 160 KIVVIPNGVDTERFSPDLDARARL--REEL-------GLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLV 230 (365)
T ss_pred heeEeCCCcCHHhcCCcccchHHH--HHhc-------CCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 999999999987765543321110 1122 2356789999999999999999999999999888899999999
Q ss_pred eCCCCCCCchHHHHHHHHh-hCCC---------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccc
Q 043412 228 TNPYHSGRDFGNKIVNFVE-DSDL---------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTE 297 (383)
Q Consensus 228 G~~~~~~~~~~~~~~~~~~-~~~~---------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e 297 (383)
|.+.. ......... ..++ .+++..+|+.||++++||..|++|++++|||+||+|||+++.++..+
T Consensus 231 G~~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e 305 (365)
T cd03807 231 GDGPD-----RANLELLALKELGLEDKVILLGERSDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAE 305 (365)
T ss_pred cCCcc-----hhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHH
Confidence 98732 233333333 3333 35677899999999999999999999999999999999999999999
Q ss_pred cccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 298 YLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 298 ~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++.+ +|++++.+ |+++++++|.++++|++.+.++++++++.+.++|||+.+++++.++|+
T Consensus 306 ~~~~-~g~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 306 LVGD-TGFLVPPG------------------DPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred Hhhc-CCEEeCCC------------------CHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9988 88888776 999999999999999999999999999999999999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-36 Score=274.42 Aligned_cols=324 Identities=17% Similarity=0.175 Sum_probs=223.7
Q ss_pred CCCCC-CCChhHHHHHHHHHHHhcccCCCceeeeecCCCccc----chh---hcC--CC-hhhhhHHHHHHhhhcCCCcc
Q 043412 2 APFLS-GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQS----LQF---WEG--LP-HHMRNLAVELYNTECRTNET 70 (383)
Q Consensus 2 ~p~~~-~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~----~~~---~~~--~~-~~~~~~~~~l~~~~~~~~pD 70 (383)
.+++. .||.++++.+++++|.+.|+...+.+.......... ... ... ++ .........+.+++++.+||
T Consensus 7 ~~~~~~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~D 86 (359)
T PRK09922 7 GEAVSGFGGMETVISNVINTFEESKINCEMFFFCRNDKMDKAWLKEIKYAQSFSNIKLSFLRRAKHVYNFSKWLKETQPD 86 (359)
T ss_pred cccccCCCchhHHHHHHHHHhhhcCcceeEEEEecCCCCChHHHHhcchhcccccchhhhhcccHHHHHHHHHHHhcCCC
Confidence 34543 499999999999999999443333333332221100 000 000 11 11123456778889999999
Q ss_pred EEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeE
Q 043412 71 VVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVV 150 (383)
Q Consensus 71 iV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~ 150 (383)
+||+|+....+............. ......+. ... .... .....+..+|.++++|+..++.+.+++++++++.
T Consensus 87 ii~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~--~~~-~~~~-~~~~~~~~~d~~i~~S~~~~~~~~~~~~~~~ki~ 159 (359)
T PRK09922 87 IVICIDVISCLYANKARKKSGKQF---KIFSWPHF--SLD-HKKH-AECKKITCADYHLAISSGIKEQMMARGISAQRIS 159 (359)
T ss_pred EEEEcCHHHHHHHHHHHHHhCCCC---eEEEEecC--ccc-ccch-hhhhhhhcCCEEEEcCHHHHHHHHHcCCCHHHEE
Confidence 999997544332222221111111 00001010 000 0011 1112247899999999999999999888888999
Q ss_pred EecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc--cccCHHHHHHHHHHHhccCCCeEEEEEe
Q 043412 151 KIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE--YRKGWDVLLKAYLEEFSKADGVVLYLLT 228 (383)
Q Consensus 151 vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~~~~~~l~i~G 228 (383)
+||||+|.+.+...... .++.++++++||+. +.||++.+++++..+. ++++|+++|
T Consensus 160 vi~N~id~~~~~~~~~~-------------------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG 217 (359)
T PRK09922 160 VIYNPVEIKTIIIPPPE-------------------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIG 217 (359)
T ss_pred EEcCCCCHHHccCCCcc-------------------cCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEe
Confidence 99999996543321111 23467899999986 4699999999998773 379999999
Q ss_pred CCCCCCCchHHHHHHHHhhCCCCCcc-------------ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC-CCC
Q 043412 229 NPYHSGRDFGNKIVNFVEDSDLEKPD-------------DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN-WSG 294 (383)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~v-------------~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~-~~g 294 (383)
+| +..+.+++.++++++.+++ ..+|+.+|++++||.+||||++++||||||+|||+++ .+|
T Consensus 218 ~g-----~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g 292 (359)
T PRK09922 218 DG-----SDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG 292 (359)
T ss_pred CC-----ccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC
Confidence 98 4467788888877765333 3456789999999999999999999999999999999 899
Q ss_pred ccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 295 PTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 295 ~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
..|++.++ +|++++++ |+++++++|.++++|++.+. .++......+|+.+.+.+++.+
T Consensus 293 ~~eiv~~~~~G~lv~~~------------------d~~~la~~i~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 351 (359)
T PRK09922 293 PRDIIKPGLNGELYTPG------------------NIDEFVGKLNKVISGEVKYQ---HDAIPNSIERFYEVLYFKNLNN 351 (359)
T ss_pred hHHHccCCCceEEECCC------------------CHHHHHHHHHHHHhCcccCC---HHHHHHHHHHhhHHHHHHHHHH
Confidence 99999886 78887766 99999999999999998542 2222224567888999999999
Q ss_pred HHHHHHh
Q 043412 374 HIKDILS 380 (383)
Q Consensus 374 ~~~~~~~ 380 (383)
+|.++++
T Consensus 352 ~~~~~~~ 358 (359)
T PRK09922 352 ALFSKLQ 358 (359)
T ss_pred HHHHHhc
Confidence 9998875
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=284.39 Aligned_cols=219 Identities=18% Similarity=0.195 Sum_probs=194.0
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
+++||.|+++|+..++.+.++|.+++|+.+||||+|.+.|.+..... ..++.++++++||+.+
T Consensus 242 ~~~ad~Ii~~s~~~~~~~~~~g~~~~ki~vIpNgid~~~f~~~~~~~-----------------~~~~~~~i~~vGrl~~ 304 (475)
T cd03813 242 YQAADRITTLYEGNRERQIEDGADPEKIRVIPNGIDPERFAPARRAR-----------------PEKEPPVVGLIGRVVP 304 (475)
T ss_pred HHhCCEEEecCHHHHHHHHHcCCCHHHeEEeCCCcCHHHcCCccccc-----------------cCCCCcEEEEEecccc
Confidence 68999999999999998888998889999999999998876643310 1356789999999999
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccCceEEecCCCCCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAADVFVLPSRGEGW 273 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ps~~e~~ 273 (383)
.||++.+++|++.+.++.|+++++|+|+++. +..+.++++++++++++. +++..+|+.+|++++||..|++
T Consensus 305 ~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~-~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~l~~aDv~vlpS~~Eg~ 383 (475)
T cd03813 305 IKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE-DPEYAEECRELVESLGLEDNVKFTGFQNVKEYLPKLDVLVLTSISEGQ 383 (475)
T ss_pred ccCHHHHHHHHHHHHHhCCCeEEEEECCCCc-ChHHHHHHHHHHHHhCCCCeEEEcCCccHHHHHHhCCEEEeCchhhcC
Confidence 9999999999999998899999999998752 346778888888888775 4556788999999999999999
Q ss_pred ChHHHHHHHcCCCEEEcCCCCccccccC------C-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHH
Q 043412 274 GRPLVEAMSMGLPVIATNWSGPTEYLTE------E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDE 346 (383)
Q Consensus 274 ~~~~~Ea~a~G~PvI~~~~~g~~e~v~~------~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~ 346 (383)
|++++|||+||+|||+|+.++..|++.+ + +|+++++. |+++++++|.++++|++.
T Consensus 384 p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~------------------d~~~la~ai~~ll~~~~~ 445 (475)
T cd03813 384 PLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPA------------------DPEALARAILRLLKDPEL 445 (475)
T ss_pred ChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCC------------------CHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999988 2 66666655 999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 347 AKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 347 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+++|++++++++.+.|+|+.++++|.++|+
T Consensus 446 ~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 446 RRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999984
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=290.11 Aligned_cols=239 Identities=16% Similarity=0.168 Sum_probs=184.7
Q ss_pred cCCCCEEEEeChHHHHHHHh-cC-CC---------------------CCCeEEecCCCcCCCCCCCCCCCCccc------
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SG-VD---------------------PAKVVKIVQPVHVGFFDPVNCDPIDLA------ 172 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~-~~---------------------~~~i~vi~ngid~~~~~~~~~~~~~~~------ 172 (383)
+..||.||+.|...++.+.. |+ .+ ..++.|||||+|++.|.|.........
T Consensus 379 l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~ 458 (1050)
T TIGR02468 379 LDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEH 458 (1050)
T ss_pred HHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccc
Confidence 78999999999999986444 42 11 238999999999999988543211000
Q ss_pred -cCCcccc--ccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhcc--CCCeEEEEEeCCCCC------CCchHHHH
Q 043412 173 -SIGKPVL--GLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSK--ADGVVLYLLTNPYHS------GRDFGNKI 241 (383)
Q Consensus 173 -~~~~~~l--~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~--~~~~~l~i~G~~~~~------~~~~~~~~ 241 (383)
......+ ........+++++|+++||+.++||++.+++|+..+.+. .+++. +|+|+++.. ..++...+
T Consensus 459 ~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 459 PAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSV 537 (1050)
T ss_pred cccccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHH
Confidence 0000000 000011256788999999999999999999999988653 34665 456765321 12334667
Q ss_pred HHHHhhCCCCCc-----------cccccccC----ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-Cce
Q 043412 242 VNFVEDSDLEKP-----------DDGWAPAA----DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGY 305 (383)
Q Consensus 242 ~~~~~~~~~~~~-----------v~~~~~~a----di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~ 305 (383)
..+++.+++.+. +..+|+.| |+||+||.+|+||++++||||||+|||+|+.+|..|++.++ +|+
T Consensus 538 ~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGl 617 (1050)
T TIGR02468 538 LKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGL 617 (1050)
T ss_pred HHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEE
Confidence 788888887643 45677766 69999999999999999999999999999999999999885 888
Q ss_pred eeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 306 PLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 306 ~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++++. |+++|+++|.++++|++.+++|++++++.+ ++|+|+.++++|.+.+..++.
T Consensus 618 LVdP~------------------D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 618 LVDPH------------------DQQAIADALLKLVADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred EECCC------------------CHHHHHHHHHHHhhCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHhc
Confidence 88877 999999999999999999999999999986 579999999999999998764
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=271.36 Aligned_cols=334 Identities=17% Similarity=0.165 Sum_probs=233.4
Q ss_pred CCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchh---h-----cCCChhhhhHHHHHHhhhcCCCccEEEe
Q 043412 3 PFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQF---W-----EGLPHHMRNLAVELYNTECRTNETVVIC 74 (383)
Q Consensus 3 p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~l~~~~~~~~pDiV~~ 74 (383)
+-+..||.++.+.++++.|.++|+...+..... ......... . ...+.........+.+++++.+||+||+
T Consensus 7 ~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdiv~~ 85 (360)
T cd04951 7 TGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG-ESEVKPPIDATIILNLNMSKNPLSFLLALWKLRKILRQFKPDVVHA 85 (360)
T ss_pred cCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC-CCCccchhhccceEEecccccchhhHHHHHHHHHHHHhcCCCEEEE
Confidence 456779999999999999999998655422211 111100000 0 0011122334456777888999999999
Q ss_pred cCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHH-HhcCCCCEEEEeChHHHHHHHhc-CCCCCCeEEe
Q 043412 75 HSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHV-KRCNRMDFVWVPTDFHVSTFIRS-GVDPAKVVKI 152 (383)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ad~vi~~s~~~~~~~~~~-~~~~~~i~vi 152 (383)
|.........+...... .. +.....+... .......... .....++.++++|+...+.+.+. +.+++++.++
T Consensus 86 ~~~~~~~~~~l~~~~~~-~~---~~v~~~h~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i 159 (360)
T cd04951 86 HMFHANIFARLLRLFLP-SP---PLICTAHSKN--EGGRLRMLAYRLTDFLSDLTTNVSKEALDYFIASKAFNANKSFVV 159 (360)
T ss_pred cccchHHHHHHHHhhCC-CC---cEEEEeeccC--chhHHHHHHHHHHhhccCceEEEcHHHHHHHHhccCCCcccEEEE
Confidence 96544322222211111 11 1111111111 0111111111 12355788899999999998885 4677899999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|||+|...+.+...... ..... ++..++.++++++|++.+.||++.+++++.++.++.|+++|+++|+|
T Consensus 160 ~ng~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g-- 228 (360)
T cd04951 160 YNGIDTDRFRKDPARRL--KIRNA-------LGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDG-- 228 (360)
T ss_pred ccccchhhcCcchHHHH--HHHHH-------cCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCC--
Confidence 99999877654332110 00111 12346789999999999999999999999999888899999999988
Q ss_pred CCCchHHHHHHHHhhCCCC---------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCC
Q 043412 233 SGRDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEEN 303 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~ 303 (383)
+..+.+++.++.+++. +++..+|+.||++++||..|++|++++|||++|+|||+++.++..|++.+ +
T Consensus 229 ---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~-~ 304 (360)
T cd04951 229 ---PLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD-S 304 (360)
T ss_pred ---CcHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC-C
Confidence 3456666666665543 56678899999999999999999999999999999999999999999987 7
Q ss_pred ceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 304 GYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 304 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
|++++++ |+++++++|.++++ +++.+..++++ ++.+.++|||+.+++++.++|++
T Consensus 305 g~~~~~~------------------~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~~ 360 (360)
T cd04951 305 GLIVPIS------------------DPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYTG 360 (360)
T ss_pred ceEeCCC------------------CHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhhC
Confidence 7777766 99999999999995 56666666666 77788999999999999999963
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=271.52 Aligned_cols=210 Identities=21% Similarity=0.259 Sum_probs=184.7
Q ss_pred hcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
.++.+|.++++|+..++.+.+.+.++.++.+++||+|.+.+.+... ..+.+.++++|++.
T Consensus 139 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~~g~d~~~~~~~~~--------------------~~~~~~i~~~G~~~ 198 (367)
T cd05844 139 LARRAALFIAVSQFIRDRLLALGFPPEKVHVHPIGVDTAKFTPATP--------------------ARRPPRILFVGRFV 198 (367)
T ss_pred HHHhcCEEEECCHHHHHHHHHcCCCHHHeEEecCCCCHHhcCCCCC--------------------CCCCcEEEEEEeec
Confidence 3688999999999999999998888889999999999877765322 23467899999999
Q ss_pred cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCC
Q 043412 201 YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~ 269 (383)
+.||++.+++|+..+.++.++++|+++|++ +..++++.+++.+++. +++..+|+.||++++||.
T Consensus 199 ~~K~~~~li~a~~~l~~~~~~~~l~ivG~g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~ 273 (367)
T cd05844 199 EKKGPLLLLEAFARLARRVPEVRLVIIGDG-----PLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQPSV 273 (367)
T ss_pred cccChHHHHHHHHHHHHhCCCeEEEEEeCc-----hHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEECcc
Confidence 999999999999999888899999999987 5567788888876654 345688899999999996
Q ss_pred ------CCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc
Q 043412 270 ------GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342 (383)
Q Consensus 270 ------~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~ 342 (383)
.||+|++++|||+||+|||+++.++..|++.++ +|+++++. |+++++++|.++++
T Consensus 274 ~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~------------------d~~~l~~~i~~l~~ 335 (367)
T cd05844 274 TAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEG------------------DVAALAAALGRLLA 335 (367)
T ss_pred cCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCC------------------CHHHHHHHHHHHHc
Confidence 599999999999999999999999999999875 77777765 99999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 343 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
|++.+.+|+.++++.+.++|||+.+++++.+
T Consensus 336 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 336 DPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999998899999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=270.55 Aligned_cols=324 Identities=16% Similarity=0.090 Sum_probs=214.1
Q ss_pred CCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhc----------------------CCChhhhhHHHHHHh
Q 043412 5 LSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWE----------------------GLPHHMRNLAVELYN 62 (383)
Q Consensus 5 ~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~l~~ 62 (383)
+..||.++.+.+|++.+.++|+...+.+.-...+ +...... -.+.........+.+
T Consensus 10 l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (405)
T PRK10125 10 LAEGGAAGVALDLHQRALQQGLASHFVYGYGKGG--KESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYR 87 (405)
T ss_pred ecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCc--ccccccCCcceEEEecccHHHHHHHHHHHhcchhhcchHHHHHH
Confidence 5679999999999999999998766433322211 1100000 011122234556666
Q ss_pred hh-cCCCccEEEecCCCCCCCCcc----------cccCCCCCCCCCCCcccccceee-------ee-----------cCC
Q 043412 63 TE-CRTNETVVICHSEPGAWYPPL----------FDTLPCPPTPGYGDFMAVIGRTM-------FE-----------TDR 113 (383)
Q Consensus 63 ~~-~~~~pDiV~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-------~~-----------~~~ 113 (383)
++ ++++|||||+|...+.+.... +.....+.+.+.|+.....|... |. ...
T Consensus 88 ~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~ 167 (405)
T PRK10125 88 TITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPP 167 (405)
T ss_pred HHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCC
Confidence 66 688999999998766433211 11111223322333222211110 00 000
Q ss_pred --CC---HH-------HHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCcccccc
Q 043412 114 --VS---PE-------HVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGL 181 (383)
Q Consensus 114 --~~---~~-------~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~ 181 (383)
.. +. +....+.++.++++|++.++.+.+.. ...++.+||||+|++.+.+........
T Consensus 168 ~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~-~~~~i~vI~NGid~~~~~~~~~~~~~~---------- 236 (405)
T PRK10125 168 VKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLY-GPGRCRIINNGIDMATEAILAELPPVR---------- 236 (405)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHc-CCCCEEEeCCCcCcccccccccccccc----------
Confidence 00 01 11113567899999999999987732 246999999999975332221110000
Q ss_pred CCCCCCCCcEEEEEeecc--ccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Ccccc
Q 043412 182 SNMNTSSKEFVFLSVFKW--EYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDG 256 (383)
Q Consensus 182 ~~~~~~~~~~~i~~~g~~--~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~ 256 (383)
.++++++++++|+. .+.||++.+++|+..+ .++++|+++|.+.... ...+..+|.. +++..
T Consensus 237 ----~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~~~L~ivG~g~~~~-------~~~v~~~g~~~~~~~l~~ 302 (405)
T PRK10125 237 ----ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDKIELHTFGKFSPFT-------AGNVVNHGFETDKRKLMS 302 (405)
T ss_pred ----cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCCeEEEEEcCCCccc-------ccceEEecCcCCHHHHHH
Confidence 02456778899983 4789999999999876 3579999999873211 1234455554 34678
Q ss_pred ccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHH
Q 043412 257 WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL 336 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~ 336 (383)
+|+.||++|+||.+|+||++++||||||+|||+|+.||.+|++++++|++++++ |+++|++.
T Consensus 303 ~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~~G~lv~~~------------------d~~~La~~ 364 (405)
T PRK10125 303 ALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKSGGKTVSEE------------------EVLQLAQL 364 (405)
T ss_pred HHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCCcEEEECCC------------------CHHHHHhc
Confidence 899999999999999999999999999999999999999999988789888887 99999985
Q ss_pred HHHHhcCHHHHHH----HHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 337 MRLVVSNVDEAKA----KGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 337 i~~ll~~~~~~~~----~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
+ +++..++ +..++++++.++||++.++++|.++|+++
T Consensus 365 ~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 365 S-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred c-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 4 3443332 23567888888999999999999999863
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=271.81 Aligned_cols=338 Identities=19% Similarity=0.171 Sum_probs=232.7
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcc--c-c-----hhhcCCCh----------hhhhHHHHHHhhhcCC-
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ--S-L-----QFWEGLPH----------HMRNLAVELYNTECRT- 67 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~--~-~-----~~~~~~~~----------~~~~~~~~l~~~~~~~- 67 (383)
.||.++++.+++++|.+.|+.+.+.......+... . . ..+...+. ........+.+.+++.
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPIVELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADDLLRFLRREG 99 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCCccccccceEEEecccccccCCChhhcchhHHHHHHHHHHHHHhcC
Confidence 58999999999999999998765422111111110 0 0 00000000 0012234455566666
Q ss_pred -CccEEEecCCCCCCCCcccccCC-CCCCCCCCCcccccceeeeec-----CCCCHHHHHhcCCCCEEEEeChHHHHHHH
Q 043412 68 -NETVVICHSEPGAWYPPLFDTLP-CPPTPGYGDFMAVIGRTMFET-----DRVSPEHVKRCNRMDFVWVPTDFHVSTFI 140 (383)
Q Consensus 68 -~pDiV~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ad~vi~~s~~~~~~~~ 140 (383)
+||+||+|.....+....+.... .+.+..++............. ..........++.+|.++++|+..++.+.
T Consensus 100 ~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 179 (398)
T cd03800 100 GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELY 179 (398)
T ss_pred CCccEEEEecCccchHHHHHHhhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHH
Confidence 99999999654433332222221 121111111110000000000 00011123347899999999999999888
Q ss_pred h-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccC
Q 043412 141 R-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKA 219 (383)
Q Consensus 141 ~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~ 219 (383)
+ ++.+..++.+||||+|.+.+.+....... +.... .+++.++|+++||+.+.||++.+++++..+.++.
T Consensus 180 ~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~ 249 (398)
T cd03800 180 SLYGAYPRRIRVVPPGVDLERFTPYGRAEAR---RARLL-------RDPDKPRILAVGRLDPRKGIDTLIRAYAELPELR 249 (398)
T ss_pred HHccccccccEEECCCCCccceecccchhhH---HHhhc-------cCCCCcEEEEEcccccccCHHHHHHHHHHHHHhC
Confidence 8 44455579999999998877654332110 01111 2456789999999999999999999999998888
Q ss_pred CCeEEEEEeCCCCCCCc-hHHHHHHHHhhCCCC-----------CccccccccCceEEecCCCCCCChHHHHHHHcCCCE
Q 043412 220 DGVVLYLLTNPYHSGRD-FGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPV 287 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~-~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv 287 (383)
++++|+++|++...... ....++.+++.+++. +++..+++.||++++||..|++|++++|||++|+||
T Consensus 250 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pv 329 (398)
T cd03800 250 ERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPV 329 (398)
T ss_pred CCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCE
Confidence 99999999988543222 234456666666554 345678899999999999999999999999999999
Q ss_pred EEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHH
Q 043412 288 IATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366 (383)
Q Consensus 288 I~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~ 366 (383)
|+++.++..+++.++ +|+++++. |+++++++|.++++|++.++.|++++++.+.++|||+.
T Consensus 330 i~s~~~~~~e~i~~~~~g~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~ 391 (398)
T cd03800 330 VATAVGGPRDIVVDGVTGLLVDPR------------------DPEALAAALRRLLTDPALRRRLSRAGLRRARARYTWER 391 (398)
T ss_pred EECCCCCHHHHccCCCCeEEeCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 999999999999885 78877766 99999999999999999999999999999889999999
Q ss_pred HHHHHH
Q 043412 367 VAGIVT 372 (383)
Q Consensus 367 ~~~~~~ 372 (383)
+++++.
T Consensus 392 ~~~~~~ 397 (398)
T cd03800 392 VAARLL 397 (398)
T ss_pred HHHHHh
Confidence 999875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=279.12 Aligned_cols=232 Identities=15% Similarity=0.180 Sum_probs=179.7
Q ss_pred hcCCCCEEEEeChHHHH----HHHhc----------------CC--CCCCeEEecCCCcCCCCCCCCCCCCcccc-----
Q 043412 121 RCNRMDFVWVPTDFHVS----TFIRS----------------GV--DPAKVVKIVQPVHVGFFDPVNCDPIDLAS----- 173 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~----~~~~~----------------~~--~~~~i~vi~ngid~~~~~~~~~~~~~~~~----- 173 (383)
.++.||.||+.|..... ...+| |+ +..|+.+||+|+|.+.|.|..........
T Consensus 449 ~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~i 528 (784)
T TIGR02470 449 AMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEI 528 (784)
T ss_pred HHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcch
Confidence 36889999999975533 22211 22 45699999999999988775542211100
Q ss_pred ----------CCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC----CC---c
Q 043412 174 ----------IGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS----GR---D 236 (383)
Q Consensus 174 ----------~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~----~~---~ 236 (383)
....++ ..++++++|+++||+.+.||++.+++|+.++....++++|+|+|++... +. .
T Consensus 529 e~ll~~~~~~~~~~G~-----l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~ 603 (784)
T TIGR02470 529 EELLFSLEDNDEHYGY-----LKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQA 603 (784)
T ss_pred hhhccchhhHHHHhCC-----CCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHH
Confidence 011111 1246788999999999999999999999887655568999999987421 11 1
Q ss_pred hHHHHHHHHhhCCCCCccc------------cccc----cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccc
Q 043412 237 FGNKIVNFVEDSDLEKPDD------------GWAP----AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT 300 (383)
Q Consensus 237 ~~~~~~~~~~~~~~~~~v~------------~~~~----~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~ 300 (383)
....+.++++.+++.+++. .+|+ .+|+|++||.+|+||++++|||+||+|||+|+.||..|++.
T Consensus 604 ~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~ 683 (784)
T TIGR02470 604 EIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQ 683 (784)
T ss_pred HHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhc
Confidence 3456777888888765543 2332 45799999999999999999999999999999999999998
Q ss_pred CC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 301 EE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV----SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 301 ~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
++ +|+++++. |+++++++|.+++ .|++.+++|+++|++++.++|||+.+++++.++.
T Consensus 684 dg~tGfLVdp~------------------D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 684 DGVSGFHIDPY------------------HGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCcEEEeCCC------------------CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 86 88888776 9999999999876 6999999999999999999999999999998775
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=271.19 Aligned_cols=223 Identities=16% Similarity=0.123 Sum_probs=178.5
Q ss_pred hcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec-c
Q 043412 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK-W 199 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~-~ 199 (383)
.++.+|.+|++|++.++.+.+.. .+++.+||||+|.+.|.+......... .... +.++.++++++|| +
T Consensus 153 ~~~~ad~vi~~s~~~~~~~~~~~--~~ki~vI~ngvd~~~f~~~~~~~~~~~--~~~~-------~~~~~~~i~~vgR~l 221 (396)
T cd03818 153 ALAQADAGVSPTRWQRSTFPAEL--RSRISVIHDGIDTDRLRPDPQARLRLP--NGRV-------LTPGDEVITFVARNL 221 (396)
T ss_pred HHHhCCEEECCCHHHHhhCcHhh--ccceEEeCCCccccccCCCchhhhccc--cccc-------CCCCCeEEEEECCCc
Confidence 36899999999999999887632 258999999999998876543211111 1111 2356788999997 9
Q ss_pred ccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC-------CCchHHHHHHHHhh---------CCCC--CccccccccC
Q 043412 200 EYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS-------GRDFGNKIVNFVED---------SDLE--KPDDGWAPAA 261 (383)
Q Consensus 200 ~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~-------~~~~~~~~~~~~~~---------~~~~--~~v~~~~~~a 261 (383)
.+.||++.+++|+.++.++.|+++|+|+|++... ...+.+.+.+.... +|.. +++..+|+.|
T Consensus 222 ~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~a 301 (396)
T cd03818 222 EPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVS 301 (396)
T ss_pred ccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhC
Confidence 9999999999999999888999999999974210 01122222222211 1221 4567889999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV 340 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l 340 (383)
|++++||..|++|++++||||||+|||+|+.++..|++.++ +|++++++ |+++++++|.++
T Consensus 302 dv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~------------------d~~~la~~i~~l 363 (396)
T cd03818 302 DVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFF------------------DPDALAAAVIEL 363 (396)
T ss_pred cEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCC------------------CHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999885 88888776 999999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 341 VSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 341 l~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
++|++.+.+|++++++.+.++|||+.++++|.
T Consensus 364 l~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 364 LDDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred HhCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999988999999999885
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-35 Score=268.83 Aligned_cols=317 Identities=15% Similarity=0.096 Sum_probs=222.6
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCC-cccch-------hh--cCCChhhhhHHHHHHhhhcCCCccE
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGD-LQSLQ-------FW--EGLPHHMRNLAVELYNTECRTNETV 71 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~-~~~~~-------~~--~~~~~~~~~~~~~l~~~~~~~~pDi 71 (383)
+|.+..||.++++.+++++|.+.|+...+ .+...+. ..... .+ .............+.+++++.+||+
T Consensus 6 ~~~~~~GG~~~~~~~l~~~L~~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 83 (358)
T cd03812 6 VGTMNRGGIETFIMNYYRNLDRSKIQFDF--LVTSKEEGDYDDEIEKLGGKIYYIPARKKNPLKYFKKLYKLIKKNKYDI 83 (358)
T ss_pred eCCCCCccHHHHHHHHHHhcCccceEEEE--EEeCCCCcchHHHHHHcCCeEEEecCCCccHHHHHHHHHHHHhcCCCCE
Confidence 56778999999999999999988775543 2222222 11000 00 0111122334456667778899999
Q ss_pred EEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCH-----H-HHHhcCCCCEEEEeChHHHHHHHhcCCC
Q 043412 72 VICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSP-----E-HVKRCNRMDFVWVPTDFHVSTFIRSGVD 145 (383)
Q Consensus 72 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~ad~vi~~s~~~~~~~~~~~~~ 145 (383)
||+|+....+....+........ . ..+.+... +....... . ....++.+|.++++|+..++.+... ..
T Consensus 84 v~~~~~~~~~~~~~~~~~~~~~~-~---v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~ 157 (358)
T cd03812 84 VHVHGSSASGFILLAAKKAGVKV-R---IAHSHNTS-DSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK-VK 157 (358)
T ss_pred EEEeCcchhHHHHHHHhhCCCCe-E---EEEecccc-ccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC-CC
Confidence 99997653332222222211111 0 01111110 00011111 1 1223678999999999999988775 55
Q ss_pred CCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEE
Q 043412 146 PAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLY 225 (383)
Q Consensus 146 ~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~ 225 (383)
++++.+||||+|...+.+....... ..... ..++.++++++|++.+.||++.+++++..+.++.++++++
T Consensus 158 ~~~~~vi~ngvd~~~~~~~~~~~~~---~~~~~-------~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ 227 (358)
T cd03812 158 NKKFKVIPNGIDLEKFIFNEEIRKK---RRELG-------ILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLL 227 (358)
T ss_pred cccEEEEeccCcHHHcCCCchhhhH---HHHcC-------CCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEE
Confidence 6799999999998877554322110 01111 2467899999999999999999999999999889999999
Q ss_pred EEeCCCCCCCchHHHHHHHHhhCCCC---------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 226 LLTNPYHSGRDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 226 i~G~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
++|+| +..+.+++.++..++. +++..+|+.||++++||..|++|++++|||++|+|||+|+.++..
T Consensus 228 ivG~g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~ 302 (358)
T cd03812 228 LVGDG-----ELEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKE 302 (358)
T ss_pred EEeCC-----chHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchh
Confidence 99988 4456666666665543 567889999999999999999999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043412 297 EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMI 359 (383)
Q Consensus 297 e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 359 (383)
+++.++.+++...+ ++++++++|.++++|++.++.+...+.....
T Consensus 303 ~~i~~~~~~~~~~~------------------~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~~ 347 (358)
T cd03812 303 VDLTDLVKFLSLDE------------------SPEIWAEEILKLKSEDRRERSSESIKKKGLD 347 (358)
T ss_pred hhhccCccEEeCCC------------------CHHHHHHHHHHHHhCcchhhhhhhhhhccch
Confidence 99988766665544 7899999999999999999988887766433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=263.93 Aligned_cols=340 Identities=19% Similarity=0.080 Sum_probs=226.3
Q ss_pred CCCCCC-CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchh---hcCCChhhhhHHHHHHhhhcCCCccEEEecC
Q 043412 1 MAPFLS-GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQF---WEGLPHHMRNLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 1 ~~p~~~-~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
++|+.. .||.++++.+++++|.++|+...+............... ..............+.+.+++.+||+||++.
T Consensus 5 v~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~ 84 (366)
T cd03822 5 VSPYPPRKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYGGEQEVVRVIVLDNPLDYRRAARAIRLSGPDVVVIQH 84 (366)
T ss_pred ecCCCCCCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCCCcccceeeeecCCchhHHHHHHHHhhcCCCEEEEee
Confidence 356666 799999999999999999987654332221111111000 0111112233445667778889999999986
Q ss_pred CCCCCCCcccccCCC--CCCCCCCCcccccceeeeecCC-CCHHHHHhcCCCCEEEEeC-hHHHHHHHhcCCCCCCeEEe
Q 043412 77 EPGAWYPPLFDTLPC--PPTPGYGDFMAVIGRTMFETDR-VSPEHVKRCNRMDFVWVPT-DFHVSTFIRSGVDPAKVVKI 152 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ad~vi~~s-~~~~~~~~~~~~~~~~i~vi 152 (383)
..+.+.+........ ... ..+.+...++........ ........++.+|.++++| +..++.+...+ ++++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~~~i 161 (366)
T cd03822 85 EYGIFGGEAGLYLLLLLRGL-GIPVVVTLHTVLLHEPRPGDRALLRLLLRRADAVIVMSSELLRALLLRAY--PEKIAVI 161 (366)
T ss_pred ccccccchhhHHHHHHHhhc-CCCEEEEEecCCccccchhhhHHHHHHHhcCCEEEEeeHHHHHHHHhhcC--CCcEEEe
Confidence 433221111111000 000 111122222221111111 1223334478999999996 43444433332 4699999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|||++...+.+.... .+.. ...+.++++++|++.+.||++.+++|+.++.++.++++|+++|++..
T Consensus 162 ~~~~~~~~~~~~~~~-------~~~~-------~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~ 227 (366)
T cd03822 162 PHGVPDPPAEPPESL-------KALG-------GLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHP 227 (366)
T ss_pred CCCCcCcccCCchhh-------Hhhc-------CCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCcc
Confidence 999987665443221 0000 13567899999999999999999999999998889999999998743
Q ss_pred CCCchHHHHHHHHhhCCCC------------CccccccccCceEEecCCCC--CCChHHHHHHHcCCCEEEcCCCCcccc
Q 043412 233 SGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPSRGE--GWGRPLVEAMSMGLPVIATNWSGPTEY 298 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps~~e--~~~~~~~Ea~a~G~PvI~~~~~g~~e~ 298 (383)
..........++++.+++. +++..+++.||++++||..| ++|++++|||+||+|||+++.++..++
T Consensus 228 ~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~~~~i 307 (366)
T cd03822 228 DLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGHAEEV 307 (366)
T ss_pred chhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCChhee
Confidence 2211111101224444432 45678889999999999999 999999999999999999999984444
Q ss_pred ccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 299 LTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 299 v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
...++|++++.+ |+++++++|.++++|++.+.+|++++++.+.+ |||+.+++++.++|+
T Consensus 308 ~~~~~g~~~~~~------------------d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 308 LDGGTGLLVPPG------------------DPAALAEAIRRLLADPELAQALRARAREYARA-MSWERVAERYLRLLA 366 (366)
T ss_pred eeCCCcEEEcCC------------------CHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHhC
Confidence 444588877766 99999999999999999999999999998665 999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=263.07 Aligned_cols=322 Identities=21% Similarity=0.224 Sum_probs=234.5
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhh-cCC-------ChhhhhHHHHHHhhhcCCCccEEE
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFW-EGL-------PHHMRNLAVELYNTECRTNETVVI 73 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~l~~~~~~~~pDiV~ 73 (383)
+|-+ +.|.++.+++++++|.++|+...+................ ... ..........+.+.+++.+||+||
T Consensus 6 ~~~~-~~~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~ 84 (355)
T cd03799 6 VKEF-PRLSETFILREILALEAAGHEVEIFSLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLARELRRLGIDHIH 84 (355)
T ss_pred CCCC-CCcchHHHHHHHHHHHhCCCeEEEEEecCcccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 4555 4458899999999999999876642221111111100000 000 011122334455566778999999
Q ss_pred ecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhc-CCCCCCeEEe
Q 043412 74 CHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRS-GVDPAKVVKI 152 (383)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~-~~~~~~i~vi 152 (383)
+|..........+..... ..+.....++...+.... .......++.+|.++++|+..++.+.+. +.+..++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi 159 (355)
T cd03799 85 AHFGTTPATVAMLASRLG----GIPYSFTAHGKDIFRSPD-AIDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVV 159 (355)
T ss_pred ECCCCchHHHHHHHHHhc----CCCEEEEEecccccccCc-hHHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEE
Confidence 997543222222221111 111122222222222111 1345556899999999999999999984 7777899999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|||+|.+.+.+.... ...+.+.++++|++.+.||++.+++++.++.++.++++++++|.+
T Consensus 160 ~~~~d~~~~~~~~~~------------------~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~-- 219 (355)
T cd03799 160 HCGVDLERFPPRPPP------------------PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDG-- 219 (355)
T ss_pred eCCcCHHHcCCcccc------------------ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECC--
Confidence 999998877654310 034578899999999999999999999999888889999999987
Q ss_pred CCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCC------CCCChHHHHHHHcCCCEEEcCCCCc
Q 043412 233 SGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRG------EGWGRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~------e~~~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+....+.+.++..++. +++..+++.||++++||.. |++|++++|||++|+|||+++.++.
T Consensus 220 ---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~ 296 (355)
T cd03799 220 ---PLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGI 296 (355)
T ss_pred ---ccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCc
Confidence 3456677776665543 4567888999999999998 9999999999999999999999999
Q ss_pred cccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 296 TEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 296 ~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
.+++.++ +|++++++ |+++++++|.++++|++.+.+|++++++.+.++|||+.++++
T Consensus 297 ~~~i~~~~~g~~~~~~------------------~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 297 PELVEDGETGLLVPPG------------------DPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred chhhhCCCceEEeCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 9999986 88888766 999999999999999999999999999999999999999875
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=277.68 Aligned_cols=239 Identities=18% Similarity=0.181 Sum_probs=177.1
Q ss_pred HHhcCCCCEEEEeChHHHHHHHh----------cCCCCCCeEEecCCCcCCCCCCCCCCCCccc---------cCCcccc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIR----------SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLA---------SIGKPVL 179 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~----------~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~---------~~~~~~l 179 (383)
...+..||.++++|+..++.+.+ ...+..++.+|+||+|.+.+.|......... ...+..+
T Consensus 205 ~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l 284 (476)
T cd03791 205 KAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAAL 284 (476)
T ss_pred HHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHH
Confidence 33478899999999999988764 1234579999999999998887644321100 0000000
Q ss_pred ccCCCCC--CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC--------C
Q 043412 180 GLSNMNT--SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS--------D 249 (383)
Q Consensus 180 ~~~~~~~--~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~--------~ 249 (383)
. .++++ .++.++++++||+.++||++.+++++.++.++ +++|+++|+|. ..+.+.+++++... +
T Consensus 285 ~-~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~---~~~~~~~~~~~~~~~~~v~~~~~ 358 (476)
T cd03791 285 Q-EELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGD---PEYEEALRELAARYPGRVAVLIG 358 (476)
T ss_pred H-HHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCC---HHHHHHHHHHHHhCCCcEEEEEe
Confidence 0 11223 36889999999999999999999999998765 49999999883 24556666666553 1
Q ss_pred CC-CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCC
Q 043412 250 LE-KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 250 ~~-~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
.. +.+..+|+.||++++||.+|+||++.+|||+||+|+|+++.+|..|++.++... .+.++|+++++.
T Consensus 359 ~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-----------~~~~~G~~~~~~ 427 (476)
T cd03791 359 YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-----------TGEGTGFVFEGY 427 (476)
T ss_pred CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-----------CCCCCeEEeCCC
Confidence 11 233578899999999999999999999999999999999999999999875200 011234444444
Q ss_pred CHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 329 SVDKLRALMRLVVS---NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 329 ~~~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
|+++++++|.++++ +++.+.+|++++.+ +.|||+.++++|.++|++
T Consensus 428 ~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~~ 476 (476)
T cd03791 428 NADALLAALRRALALYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYRS 476 (476)
T ss_pred CHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHhC
Confidence 99999999999875 67778888887754 579999999999999863
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=266.11 Aligned_cols=220 Identities=22% Similarity=0.256 Sum_probs=181.4
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCC-CCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDP-AKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW 199 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~-~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~ 199 (383)
++.+|.++++|+..++.+.+ ++... .++.+|+||+|.+.+.+...... ..... ..++.++++++|++
T Consensus 152 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~----~~~~~-------~~~~~~~i~~~grl 220 (392)
T cd03805 152 TGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPD----PGLLI-------PKSGKKTFLSINRF 220 (392)
T ss_pred hhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCccccccc----ccccc-------cCCCceEEEEEeee
Confidence 68899999999999998877 44333 33459999999987766433210 01111 24678999999999
Q ss_pred ccccCHHHHHHHHHHHhccC---CCeEEEEEeCCCCCC---CchHHHHHHHHhh-CCCCCcc-----------ccccccC
Q 043412 200 EYRKGWDVLLKAYLEEFSKA---DGVVLYLLTNPYHSG---RDFGNKIVNFVED-SDLEKPD-----------DGWAPAA 261 (383)
Q Consensus 200 ~~~K~~~~ll~a~~~l~~~~---~~~~l~i~G~~~~~~---~~~~~~~~~~~~~-~~~~~~v-----------~~~~~~a 261 (383)
.+.||++.+++++.++.++. ++++|+++|+++... ..+.+++++++++ .++.+++ ..+++.|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l~~a 300 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLLSSA 300 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHHhhC
Confidence 99999999999999998876 899999999885421 2345778888888 7776443 4678999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV 340 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l 340 (383)
|++++||..|+||++++|||+||+|||+++.+|..|++.++ +|++++. |+++++++|.++
T Consensus 301 d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-------------------~~~~~a~~i~~l 361 (392)
T cd03805 301 RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-------------------TPEEFAEAMLKL 361 (392)
T ss_pred eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-------------------CHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999885 7776653 899999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 043412 341 VSNVDEAKAKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 341 l~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
+++++.+.+|++++++.+.++|||+.+++++
T Consensus 362 ~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 362 ANDPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HhChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 9999999999999999999999999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=263.71 Aligned_cols=218 Identities=15% Similarity=0.201 Sum_probs=178.1
Q ss_pred cCCCCEEEEeChHHHHHHHh-c---CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEee
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-S---GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVF 197 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~---~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g 197 (383)
.+.+|.+|++|+..++.+.+ + +.+..++.+||||++...+.+.. ..+...++++|
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~---------------------~r~~~~il~vG 326 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ---------------------ERKPFSIITAS 326 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc---------------------ccCCeEEEEEe
Confidence 57789999999998887765 2 33457899999998654433211 12356899999
Q ss_pred ccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccCceEEecCC
Q 043412 198 KWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 198 ~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ps~ 269 (383)
|+.+.||++.+++|+..+.++.|+++|.++|+| +..+.++++++.+++. .++..+|+.||++++||.
T Consensus 327 rl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G-----~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~~~adv~v~pS~ 401 (500)
T TIGR02918 327 RLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEG-----GEKQKLQKIINENQAQDYIHLKGHRNLSEVYKDYELYLSAST 401 (500)
T ss_pred ccccccCHHHHHHHHHHHHhhCCCeEEEEEECc-----hhHHHHHHHHHHcCCCCeEEEcCCCCHHHHHHhCCEEEEcCc
Confidence 999999999999999999989999999999998 4467788888877664 345688899999999999
Q ss_pred CCCCChHHHHHHHcCCCEEEcCCC-CccccccCC-CceeeecccccccccCCCCcccccCCC-HHHHHHHHHHHhcCHHH
Q 043412 270 GEGWGRPLVEAMSMGLPVIATNWS-GPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPS-VDKLRALMRLVVSNVDE 346 (383)
Q Consensus 270 ~e~~~~~~~Ea~a~G~PvI~~~~~-g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~-~~~la~~i~~ll~~~~~ 346 (383)
.||||++++||||||+|||+++.+ |.+|++.++ +|+++++++- --++.+ +++++++|.++++ ++.
T Consensus 402 ~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~-----------~~d~~~~~~~la~~I~~ll~-~~~ 469 (500)
T TIGR02918 402 SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEE-----------EDDEDQIITALAEKIVEYFN-SND 469 (500)
T ss_pred cccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcc-----------ccchhHHHHHHHHHHHHHhC-hHH
Confidence 999999999999999999999986 899999886 9999974200 000012 8899999999995 567
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 347 AKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 347 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
+.+|+++|++. +++|||+.++++|.++++++
T Consensus 470 ~~~~~~~a~~~-a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 470 IDAFHEYSYQI-AEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHH-HHhcCHHHHHHHHHHHHhhC
Confidence 89999999995 68899999999999998763
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=250.56 Aligned_cols=241 Identities=16% Similarity=0.228 Sum_probs=184.3
Q ss_pred CCCCHHHHHhc--CCCCEEEEeChHHHHHHHhcCCC-CCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCC
Q 043412 112 DRVSPEHVKRC--NRMDFVWVPTDFHVSTFIRSGVD-PAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSS 188 (383)
Q Consensus 112 ~~~~~~~~~~~--~~ad~vi~~s~~~~~~~~~~~~~-~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 188 (383)
.++...+...+ +++|.++++|+..++.+.+.+.+ ++++.+||||+|.+.|.+.... ..
T Consensus 80 ~~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~~~f~~~~~~-------------------~~ 140 (331)
T PHA01630 80 DAISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNPRMFEYKPKE-------------------KP 140 (331)
T ss_pred chhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCHHHcCCCccc-------------------cC
Confidence 34444555444 77999999999999999887765 5689999999999887654321 12
Q ss_pred CcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC--CCCCccccccccCceEEe
Q 043412 189 KEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS--DLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~adi~v~ 266 (383)
+.+++++.|++.++||++.+++|++.+.++.++++++++|++.. ...+..+.... .-.+++..+|+.||++++
T Consensus 141 ~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~-----~~~l~~~~~~~~~v~~~~l~~~y~~aDv~v~ 215 (331)
T PHA01630 141 HPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML-----DPRLFGLNGVKTPLPDDDIYSLFAGCDILFY 215 (331)
T ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc-----chhhccccceeccCCHHHHHHHHHhCCEEEE
Confidence 35677888899999999999999999988889999999996532 11221111110 112677899999999999
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCC--CCcccccCCCHHHHHHHHHHHhcC
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGP--FKGHFWAEPSVDKLRALMRLVVSN 343 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~--~~g~~~~~~~~~~la~~i~~ll~~ 343 (383)
||..|+||++++||||||+|||+|+.+|..|++.++ ||++++.+..+...... ..|.++++ |.+++++++.+++.|
T Consensus 216 pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 216 PVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALAN 294 (331)
T ss_pred CCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999886 99999875433333222 34666655 778888999998887
Q ss_pred H--HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 344 V--DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 344 ~--~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
+ +.+.++..++...+.++|||+++++++.++|++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 295 WTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3 444444444455568999999999999999975
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=254.90 Aligned_cols=221 Identities=18% Similarity=0.195 Sum_probs=179.9
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
.+.+|.|+++|+++++.+.+....++++.+++||+|.+.+....... +++...++++||+.+
T Consensus 218 ~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~~~------------------~~~~~~il~vGR~~~ 279 (463)
T PLN02949 218 GRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPLER------------------SEDPPYIISVAQFRP 279 (463)
T ss_pred cCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCccc------------------cCCCCEEEEEEeeec
Confidence 38899999999999999988433345889999999876553211100 133567999999999
Q ss_pred ccCHHHHHHHHHHHhcc----CCCeEEEEEeCCCC-CCCchHHHHHHHHhhCCCCCc-----------cccccccCceEE
Q 043412 202 RKGWDVLLKAYLEEFSK----ADGVVLYLLTNPYH-SGRDFGNKIVNFVEDSDLEKP-----------DDGWAPAADVFV 265 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~----~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~-----------v~~~~~~adi~v 265 (383)
+||++.+++|+.++.++ .++++|+|+|++.. ++.++.++++++++++++.++ +..+|+.||+++
T Consensus 280 ~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v 359 (463)
T PLN02949 280 EKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGL 359 (463)
T ss_pred cCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEE
Confidence 99999999999887653 47899999999743 223456789999998887644 456789999999
Q ss_pred ecCCCCCCChHHHHHHHcCCCEEEcCCCCcc-ccccC---C-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHH
Q 043412 266 LPSRGEGWGRPLVEAMSMGLPVIATNWSGPT-EYLTE---E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV 340 (383)
Q Consensus 266 ~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~-e~v~~---~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l 340 (383)
+||..|+||++++|||++|+|||+++.+|.. |++.+ + +|++++ |+++++++|.++
T Consensus 360 ~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--------------------~~~~la~ai~~l 419 (463)
T PLN02949 360 HSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--------------------TVEEYADAILEV 419 (463)
T ss_pred eCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--------------------CHHHHHHHHHHH
Confidence 9999999999999999999999999998864 67654 2 454443 899999999999
Q ss_pred hc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 341 VS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 341 l~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
++ +++.+++|++++++.+ ++|||+.+++++.+.+++++++
T Consensus 420 l~~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 420 LRMRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred HhCCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHhh
Confidence 98 5788899999999986 6799999999999999998865
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=252.79 Aligned_cols=313 Identities=22% Similarity=0.181 Sum_probs=222.1
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCccc-ch--hhcCCC-------hhhhhHHHHHHhhhcCCCccEEEecC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQS-LQ--FWEGLP-------HHMRNLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~-~~--~~~~~~-------~~~~~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
.||.++.+..++++|.+.|+...+............ .. .+..++ .........+.+++++.+||+||++.
T Consensus 12 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~i~~~~ 91 (348)
T cd03820 12 AGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYELDPKIKVIDLGDKRDSKLLARFKKLRRLRKLLKNNKPDVVISFL 91 (348)
T ss_pred CCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCccccCCccceeecccccccchhccccchHHHHHhhcccCCCEEEEcC
Confidence 899999999999999998876553222111100000 00 011111 11334456778888889999999997
Q ss_pred CCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHH--HHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecC
Q 043412 77 EPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPE--HVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQ 154 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~n 154 (383)
.........+....++.+ ...+............. ....++.+|.++++|+..+. .....++.++.++||
T Consensus 92 ~~~~~~~~~~~~~~~~~i------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~--~~~~~~~~~~~vi~~ 163 (348)
T cd03820 92 TSLLTFLASLGLKIVKLI------VSEHNSPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRA--LYYKKFNKNVVVIPN 163 (348)
T ss_pred chHHHHHHHHhhccccEE------EecCCCccchhhhhHHHHHHHHHHhcCCEEEEeCHHHHH--HhhccCCCCeEEecC
Confidence 541111111111111111 11111111100111111 34447899999999999982 223445679999999
Q ss_pred CCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC
Q 043412 155 PVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG 234 (383)
Q Consensus 155 gid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~ 234 (383)
|++...+.+. . ..+.+.++++|++.+.||++.++++++++.+..++++|+++|.+
T Consensus 164 ~~~~~~~~~~-~--------------------~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~---- 218 (348)
T cd03820 164 PLPFPPEEPS-S--------------------DLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDG---- 218 (348)
T ss_pred CcChhhcccc-C--------------------CCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCC----
Confidence 9988765443 0 24577899999999999999999999999888899999999987
Q ss_pred CchHHHHHHHHhhCCCC---------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC-CccccccCC-C
Q 043412 235 RDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS-GPTEYLTEE-N 303 (383)
Q Consensus 235 ~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~-g~~e~v~~~-~ 303 (383)
+....+.+.+...++. +++..+|+.||++++||..|++|++++|||+||+|||+++.+ +..+++.++ +
T Consensus 219 -~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~ 297 (348)
T cd03820 219 -PEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVN 297 (348)
T ss_pred -CCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcc
Confidence 3355566666665543 667889999999999999999999999999999999999975 556777766 8
Q ss_pred ceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 304 GYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 304 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
|++++.. |+++++++|.++++|++.+++|++++++ +.++|+|++++++|.
T Consensus 298 g~~~~~~------------------~~~~~~~~i~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 347 (348)
T cd03820 298 GLLVPNG------------------DVEALAEALLRLMEDEELRKRMGANARE-SAERFSIENIIKQWE 347 (348)
T ss_pred eEEeCCC------------------CHHHHHHHHHHHHcCHHHHHHHHHHHHH-HHHHhCHHHHHHHhc
Confidence 8877766 9999999999999999999999999976 568899999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=258.58 Aligned_cols=322 Identities=18% Similarity=0.144 Sum_probs=225.8
Q ss_pred CCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCChhhhhHHHHHHhhhcCCCccEEEecCCCCCCC
Q 043412 3 PFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPGAWY 82 (383)
Q Consensus 3 p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~~~~ 82 (383)
+....||.++++..++++|.+.|+...+.. .... .+.+.+++.+||+||+|.....+.
T Consensus 8 ~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~--~~~~--------------------~~~~~~~~~~~diih~~~~~~~~~ 65 (365)
T cd03825 8 TSDISGGAARAAYRLHRALQAAGVDSTMLV--QEKK--------------------ALISKIEIINADIVHLHWIHGGFL 65 (365)
T ss_pred cCCCCCcHHHHHHHHHHHHHhcCCceeEEE--eecc--------------------hhhhChhcccCCEEEEEccccCcc
Confidence 344569999999999999999998665422 1111 455567788999999987544332
Q ss_pred Ccc-cccC--CCCCCCCCCCcccccce----------------eeeecC----CCC-HHHH---Hhc-CCCCEEEEeChH
Q 043412 83 PPL-FDTL--PCPPTPGYGDFMAVIGR----------------TMFETD----RVS-PEHV---KRC-NRMDFVWVPTDF 134 (383)
Q Consensus 83 ~~~-~~~~--~~~~~~~~~~~~~~~~~----------------~~~~~~----~~~-~~~~---~~~-~~ad~vi~~s~~ 134 (383)
... +... .++.+..+++....... ...... ... ..+. ..+ ..++.++++|++
T Consensus 66 ~~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~ 145 (365)
T cd03825 66 SIEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRW 145 (365)
T ss_pred CHHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHH
Confidence 211 1111 22222122211100000 000000 010 1111 112 567889999999
Q ss_pred HHHHHHhc-CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc--ccCHHHHHHH
Q 043412 135 HVSTFIRS-GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY--RKGWDVLLKA 211 (383)
Q Consensus 135 ~~~~~~~~-~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~--~K~~~~ll~a 211 (383)
.++.+.+. .++..++.++|||+|.+.+.+...... +...+ .+++..++++.|+... .||++.++++
T Consensus 146 ~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~----~~~~~-------~~~~~~~i~~~~~~~~~~~K~~~~ll~a 214 (365)
T cd03825 146 LADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREA----RKRLG-------LPADKKIILFGAVGGTDPRKGFDELIEA 214 (365)
T ss_pred HHHHHHhccccCCCceEEeCCCCcccccCCCcHHHH----HHHhC-------CCCCCeEEEEEecCCCccccCHHHHHHH
Confidence 99999884 467789999999999987755432211 11111 2455667777776654 8999999999
Q ss_pred HHHHhcc-CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC---ccccccccCceEEecCCCCCCChHHHHHHHcCCCE
Q 043412 212 YLEEFSK-ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK---PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPV 287 (383)
Q Consensus 212 ~~~l~~~-~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~Pv 287 (383)
+..+.++ .++++++++|++.... ...+...+...|..+ ++..+++.||++++||..|++|++++|||+||+||
T Consensus 215 ~~~l~~~~~~~~~~~i~G~~~~~~---~~~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~Pv 291 (365)
T cd03825 215 LKRLAERWKDDIELVVFGASDPEI---PPDLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTPV 291 (365)
T ss_pred HHHhhhccCCCeEEEEeCCCchhh---hccCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCCE
Confidence 9988765 6899999999874311 111122233334433 56788999999999999999999999999999999
Q ss_pred EEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHH
Q 043412 288 IATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366 (383)
Q Consensus 288 I~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~ 366 (383)
|+++.++..|++.++ +|++++.. |++++++++.++++|++.+.+|++++++.+.++|||+.
T Consensus 292 I~~~~~~~~e~~~~~~~g~~~~~~------------------~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 353 (365)
T cd03825 292 VAFDVGGIPDIVDHGVTGYLAKPG------------------DPEDLAEGIEWLLADPDEREELGEAARELAENEFDSRV 353 (365)
T ss_pred EEecCCCChhheeCCCceEEeCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999886 78877766 99999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHH
Q 043412 367 VAGIVTDHIKDI 378 (383)
Q Consensus 367 ~~~~~~~~~~~~ 378 (383)
+++++.++|+++
T Consensus 354 ~~~~~~~~y~~~ 365 (365)
T cd03825 354 QAKRYLSLYEEL 365 (365)
T ss_pred HHHHHHHHHhhC
Confidence 999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=258.06 Aligned_cols=326 Identities=19% Similarity=0.117 Sum_probs=223.9
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchh----------hcCCChhhhhHHHHHHhhhcCCCccEEEecC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQF----------WEGLPHHMRNLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
.||.++++++++++|.+.|+...+.+.-........... ............+.......+.+||+||+++
T Consensus 14 ~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~ 93 (365)
T cd03809 14 PTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAALRLLLRLPRRLLWGLLFLLRAGDRLLLLLLGLDLLHSPH 93 (365)
T ss_pred CCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhccccccccccccccchhhHHHHHHHHHhhhcCCCeeeecc
Confidence 599999999999999999887664332221111111000 0011112333344455556668999999997
Q ss_pred CCCCCCCcccccCCCCCCCCCCCcccccceeeee---cCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEe
Q 043412 77 EPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFE---TDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKI 152 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi 152 (383)
...... .....+.+..+++........... ...........++.+|.++++|+..++.+.+ ++.++.++.++
T Consensus 94 ~~~~~~----~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi 169 (365)
T cd03809 94 NTAPLL----RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVI 169 (365)
T ss_pred cccCcc----cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEee
Confidence 544322 112222221111111100000000 0011122333378999999999999999988 56567799999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|||+|...+.+..... ..... ..++.++++++|++.+.||++.+++++..+..+.++++|+++|.+..
T Consensus 170 ~~~~~~~~~~~~~~~~-----~~~~~-------~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~ 237 (365)
T cd03809 170 PLGVDPRFRPPPAEAE-----VLRAL-------YLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGW 237 (365)
T ss_pred ccccCccccCCCchHH-----HHHHh-------cCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCcc
Confidence 9999987765543210 00000 13567899999999999999999999999998888899999998743
Q ss_pred CCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC
Q 043412 233 SGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE 301 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~ 301 (383)
.... ....++..+.. +++..+++.||++++||..|++|++++|||++|+|||+++.++..|++.+
T Consensus 238 ~~~~----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~ 313 (365)
T cd03809 238 LNEE----LLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD 313 (365)
T ss_pred ccHH----HHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceecC
Confidence 2222 22221223322 45678899999999999999999999999999999999999999998853
Q ss_pred CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 302 ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 302 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
+|++++++ |+++++++|.++++|++.+..|++++++ ..++|+|+++++++.
T Consensus 314 -~~~~~~~~------------------~~~~~~~~i~~l~~~~~~~~~~~~~~~~-~~~~~sw~~~~~~~~ 364 (365)
T cd03809 314 -AALYFDPL------------------DPEALAAAIERLLEDPALREELRERGLA-RAKRFSWEKTARRTL 364 (365)
T ss_pred -ceeeeCCC------------------CHHHHHHHHHHHhcCHHHHHHHHHHHHH-HHHhCCHHHHHHHHh
Confidence 56666655 9999999999999999999999999996 468899999999875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=254.45 Aligned_cols=318 Identities=18% Similarity=0.141 Sum_probs=220.0
Q ss_pred CCCCC--CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcC-----------CC-hhhhhHHHHHHhhhcCC
Q 043412 2 APFLS--GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEG-----------LP-HHMRNLAVELYNTECRT 67 (383)
Q Consensus 2 ~p~~~--~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~l~~~~~~~ 67 (383)
+|++. .||.+..+++++++|.++|+...+.. .............. .. ...........+ ++..
T Consensus 6 ~~~~~p~~gG~~~~~~~l~~~L~~~g~~v~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 82 (357)
T cd03795 6 GKFYPPDRGGIEQVIRDLAEGLAARGIEVAVLC--ASPEPKGRDEERNGHRVIRAPSLLNVASTPFSPSFFKQLK-KLAK 82 (357)
T ss_pred cCCCCCCCCcHHHHHHHHHHHHHhCCCceEEEe--cCCCCcchhhhccCceEEEeecccccccccccHHHHHHHH-hcCC
Confidence 45555 59999999999999999988765422 22211111100000 00 000011111111 5577
Q ss_pred CccEEEecCCCCCCCCccc-ccCCCCCCCCCCCcccccceeeeec----CCCCHHHHHhcCCCCEEEEeChHHHHHHHhc
Q 043412 68 NETVVICHSEPGAWYPPLF-DTLPCPPTPGYGDFMAVIGRTMFET----DRVSPEHVKRCNRMDFVWVPTDFHVSTFIRS 142 (383)
Q Consensus 68 ~pDiV~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~ 142 (383)
+||+||+|........... .....+.. ...++. .+.. ..........++.+|.++++|+..++.+...
T Consensus 83 ~~Dii~~~~~~~~~~~~~~~~~~~~~~i------~~~h~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~ 155 (357)
T cd03795 83 KADVIHLHFPNPLADLALLLLPRKKPVV------VHWHSD-IVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAETSPVL 155 (357)
T ss_pred CCCEEEEecCcchHHHHHHHhccCceEE------EEEcCh-hhccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHh
Confidence 9999999975442211111 11111111 111111 1111 1112222334789999999999999988774
Q ss_pred CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCe
Q 043412 143 GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGV 222 (383)
Q Consensus 143 ~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 222 (383)
+..+.++.++|||+|...+.+...... .... ...+.++++++|++.+.||++.++++++++. ++
T Consensus 156 ~~~~~~~~~i~~gi~~~~~~~~~~~~~-----~~~~-------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~----~~ 219 (357)
T cd03795 156 RRFRDKVRVIPLGLDPARYPRPDALEE-----AIWR-------RAAGRPFFLFVGRLVYYKGLDVLLEAAAALP----DA 219 (357)
T ss_pred cCCccceEEecCCCChhhcCCcchhhh-----Hhhc-------CCCCCcEEEEecccccccCHHHHHHHHHhcc----Cc
Confidence 433478999999999887765432110 0000 1356789999999999999999999999874 89
Q ss_pred EEEEEeCCCCCCCchHHHHHHHHhhCCCCC-----------ccccccccCceEEecCC--CCCCChHHHHHHHcCCCEEE
Q 043412 223 VLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-----------PDDGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIA 289 (383)
Q Consensus 223 ~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~ 289 (383)
+++++|+| +....+.+.++..+..+ ++..+++.||++++||. .|++|++++|||++|+|||+
T Consensus 220 ~l~i~G~g-----~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~ 294 (357)
T cd03795 220 PLVIVGEG-----PLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVIS 294 (357)
T ss_pred EEEEEeCC-----hhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEe
Confidence 99999988 45667777776665542 35678899999999985 59999999999999999999
Q ss_pred cCCCCccccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHH
Q 043412 290 TNWSGPTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETV 367 (383)
Q Consensus 290 ~~~~g~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~ 367 (383)
++.++..+.+.+ ++|++++++ |+++++++|.++++|++.+++|++++++.+.++|||+.+
T Consensus 295 ~~~~~~~~~i~~~~~~g~~~~~~------------------d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~ 356 (357)
T cd03795 295 TEIGTGGSYVNLHGVTGLVVPPG------------------DPAALAEAIRRLLEDPELRERLGEAARERAEEEFTADRM 356 (357)
T ss_pred cCCCCchhHHhhCCCceEEeCCC------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHhcchHhh
Confidence 999999998874 488877766 999999999999999999999999999999999999986
Q ss_pred H
Q 043412 368 A 368 (383)
Q Consensus 368 ~ 368 (383)
+
T Consensus 357 ~ 357 (357)
T cd03795 357 V 357 (357)
T ss_pred C
Confidence 4
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=251.94 Aligned_cols=328 Identities=24% Similarity=0.238 Sum_probs=235.6
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcC-------------CChhhhhHHHHHHhhhcCCCccEEE
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEG-------------LPHHMRNLAVELYNTECRTNETVVI 73 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~~~~~~pDiV~ 73 (383)
.||...++.++++.|.+.|+...+.. .............. ...........+.+.+++.+||+||
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~ 90 (374)
T cd03801 13 VGGAERHVLELARALAARGHEVTVLT--PGDGGLPDEEEVGGIVVVRPPPLLRVRRLLLLLLLALRLRRLLRRERFDVVH 90 (374)
T ss_pred cCcHhHHHHHHHHHHHhcCceEEEEe--cCCCCCCceeeecCcceecCCcccccchhHHHHHHHHHHHHHhhhcCCcEEE
Confidence 58999999999999999887654322 21111111100000 0112233445566777888999999
Q ss_pred ecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeec--------CCCCHHHHHhcCCCCEEEEeChHHHHHHHhc-CC
Q 043412 74 CHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFET--------DRVSPEHVKRCNRMDFVWVPTDFHVSTFIRS-GV 144 (383)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~-~~ 144 (383)
+++.................. ....++...... ..........++.+|.++++|+..++.+.+. +.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-----i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~ 165 (374)
T cd03801 91 AHDWLALLAAALAARLLGIPL-----VLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELGGV 165 (374)
T ss_pred EechhHHHHHHHHHHhcCCcE-----EEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC
Confidence 997654332211111111111 222222211110 0011222233689999999999999999984 44
Q ss_pred CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEE
Q 043412 145 DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVL 224 (383)
Q Consensus 145 ~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l 224 (383)
++.++.++|||++...+.+... .. ..... ..++.+.++++|++.+.||++.+++++..+.++.++++|
T Consensus 166 ~~~~~~~i~~~~~~~~~~~~~~-~~----~~~~~-------~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l 233 (374)
T cd03801 166 PPEKITVIPNGVDTERFRPAPR-AA----RRRLG-------IPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRL 233 (374)
T ss_pred CCCcEEEecCcccccccCccch-HH----HhhcC-------CcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEE
Confidence 4469999999999887654310 00 00000 135678999999999999999999999999888899999
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
+++|++ .....+.+.++..+.. +++..+++.||++++|+..|++|++++|||++|+|||+++.+
T Consensus 234 ~i~G~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~ 308 (374)
T cd03801 234 VIVGDG-----PLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG 308 (374)
T ss_pred EEEeCc-----HHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC
Confidence 999976 5566666666554433 567788999999999999999999999999999999999999
Q ss_pred CccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 294 GPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 294 g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
+..+++.+ .+|++++.. |+++++++|.++++|++.+.+|++++++.+.+.|+|+.+++++.
T Consensus 309 ~~~~~~~~~~~g~~~~~~------------------~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (374)
T cd03801 309 GIPEVVEDGETGLLVPPG------------------DPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTE 370 (374)
T ss_pred ChhHHhcCCcceEEeCCC------------------CHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99999986 477877765 89999999999999999999999999988899999999999999
Q ss_pred HHHH
Q 043412 373 DHIK 376 (383)
Q Consensus 373 ~~~~ 376 (383)
++|+
T Consensus 371 ~~~~ 374 (374)
T cd03801 371 EVYY 374 (374)
T ss_pred HhhC
Confidence 8873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=255.31 Aligned_cols=325 Identities=24% Similarity=0.202 Sum_probs=227.5
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCC-cccc-------hhhc--CCChhhhhHHHHHHhhhcCCCccEEEecC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGD-LQSL-------QFWE--GLPHHMRNLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~-~~~~-------~~~~--~~~~~~~~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
.||.......++++|.+.|+...+......... .... +... ..+.........+.+.+++.+||+||+|.
T Consensus 9 ~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~~~~ 88 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDRRGINPFKDLKALLRLYRLLRKERPDIVHTHT 88 (359)
T ss_pred chhHHHHHHHHHHHHHhcCCeeEEEecCCCcccccccCCceEEeccccccccChHhHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 689999999999999998876553221111110 0000 0000 01122233455677788899999999996
Q ss_pred CCCCCCCccccc-CCCCCCCCCCCcccccceeeeecC-C-----CCHHHHHhcCCCCEEEEeChHHHHHHHhcCCC--CC
Q 043412 77 EPGAWYPPLFDT-LPCPPTPGYGDFMAVIGRTMFETD-R-----VSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVD--PA 147 (383)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~--~~ 147 (383)
..+.+...+... ...+.. ....++....... . ........++.+|.++++|+..++.+.+.+.. ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~ 163 (359)
T cd03808 89 PKPGILGRLAARLAGVPKV-----IYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIKKKK 163 (359)
T ss_pred ccchhHHHHHHHHcCCCCE-----EEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCCcCc
Confidence 544332222222 111111 1111111110000 0 01111223678999999999999999986543 45
Q ss_pred CeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEE
Q 043412 148 KVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLL 227 (383)
Q Consensus 148 ~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~ 227 (383)
++.++++|+|.+.+.+.... ..++.++++++|++.+.||++.++++++.+.++.++++|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~ 225 (359)
T cd03808 164 TVLIPGSGVDLDRFSPSPEP------------------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV 225 (359)
T ss_pred eEEecCCCCChhhcCccccc------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEE
Confidence 77788999998776554321 024578999999999999999999999999888899999999
Q ss_pred eCCCCCCCchHHHHHH-----HHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC
Q 043412 228 TNPYHSGRDFGNKIVN-----FVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE 302 (383)
Q Consensus 228 G~~~~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~ 302 (383)
|.+..........+.. .+...|..+++..+|+.||++++||..|++|++++|||+||+|||+++.++..+++.++
T Consensus 226 G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~ 305 (359)
T cd03808 226 GDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDG 305 (359)
T ss_pred cCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcC
Confidence 9985422111100111 12223435678899999999999999999999999999999999999999999999864
Q ss_pred -CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 303 -NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 303 -~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
+|++++.+ |+++++++|.+++.|++.+.++++++++.+.++|+|+.+++++.
T Consensus 306 ~~g~~~~~~------------------~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 306 VNGFLVPPG------------------DAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred cceEEECCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 78877766 99999999999999999999999999999899999999998875
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=267.85 Aligned_cols=236 Identities=18% Similarity=0.184 Sum_probs=177.5
Q ss_pred cCCCCEEEEeChHHHHH-------HHhc-------------CC--CCCCeEEecCCCcCCCCCCCCCCCCcc----ccCC
Q 043412 122 CNRMDFVWVPTDFHVST-------FIRS-------------GV--DPAKVVKIVQPVHVGFFDPVNCDPIDL----ASIG 175 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~-------~~~~-------------~~--~~~~i~vi~ngid~~~~~~~~~~~~~~----~~~~ 175 (383)
+..||.||+.|...... +..+ |+ ...++.+||+|+|...|.|........ ....
T Consensus 473 ~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~ 552 (815)
T PLN00142 473 MNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIE 552 (815)
T ss_pred HHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccch
Confidence 67899999999777641 2221 22 245899999999999887654221100 0000
Q ss_pred ccccc----cCCCCC--CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC-CC---Cc---hHHHHH
Q 043412 176 KPVLG----LSNMNT--SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH-SG---RD---FGNKIV 242 (383)
Q Consensus 176 ~~~l~----~~~~~~--~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~-~~---~~---~~~~~~ 242 (383)
...+. ...++. ++++++|+++||+.+.||++.+++|+.++.+..++++|+|+|++.. .. .+ ....+.
T Consensus 553 ~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 553 ELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred hhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHH
Confidence 00000 000111 4567799999999999999999999998877778899999998721 11 11 124567
Q ss_pred HHHhhCCCCCcccc------------cc---c-cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-Cce
Q 043412 243 NFVEDSDLEKPDDG------------WA---P-AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGY 305 (383)
Q Consensus 243 ~~~~~~~~~~~v~~------------~~---~-~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~ 305 (383)
++++++++.+.+.. ++ + .+|+|++||.+|+||++++|||+||+|||+|+.||..|++.++ +|+
T Consensus 633 ~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~ 712 (815)
T PLN00142 633 SLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGF 712 (815)
T ss_pred HHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEE
Confidence 78888887655432 22 2 5799999999999999999999999999999999999999986 888
Q ss_pred eeecccccccccCCCCcccccCCCHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 306 PLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV----VSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 306 ~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l----l~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
++++. |+++++++|.++ +.|++.+++|+++|++++.++|||+.+++++.++.
T Consensus 713 LV~P~------------------D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 713 HIDPY------------------HGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred EeCCC------------------CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 88877 999999998765 47999999999999999999999999999998875
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=253.34 Aligned_cols=215 Identities=15% Similarity=0.175 Sum_probs=172.0
Q ss_pred cCCCCEEEEeChHHHHHHHhc-CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRS-GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~-~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
++++|.++++|+..++.+.+. +..+.++.+||||+|.+.|.+...... . ..++..+++++|++.
T Consensus 170 ~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~------~---------~~~~~~~ilf~G~l~ 234 (397)
T TIGR03087 170 AARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPN------P---------YPPGKRVLVFTGAMD 234 (397)
T ss_pred HhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccC------C---------CCCCCcEEEEEEecC
Confidence 689999999999999999874 445678999999999988865432110 0 123467899999999
Q ss_pred cccCHHHHH----HHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhh-----CCCCCccccccccCceEEecCC-C
Q 043412 201 YRKGWDVLL----KAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVED-----SDLEKPDDGWAPAADVFVLPSR-G 270 (383)
Q Consensus 201 ~~K~~~~ll----~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~adi~v~ps~-~ 270 (383)
+.||++.++ +++..+.++.|+++|+|+|+++. ..++++... .|..+++..+|+.||++++||. .
T Consensus 235 ~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~------~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~ 308 (397)
T TIGR03087 235 YWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS------PAVRALAALPGVTVTGSVADVRPYLAHAAVAVAPLRIA 308 (397)
T ss_pred CccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh------HHHHHhccCCCeEEeeecCCHHHHHHhCCEEEeccccc
Confidence 999999988 45566667789999999998732 233333322 3444678899999999999997 5
Q ss_pred CCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHH
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAK 350 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~ 350 (383)
||+|++++|||+||+|||+|+.++.......++|++++ + |+++++++|.++++|++.+++|
T Consensus 309 eG~~~~~lEAma~G~PVV~t~~~~~~i~~~~~~g~lv~-~------------------~~~~la~ai~~ll~~~~~~~~~ 369 (397)
T TIGR03087 309 RGIQNKVLEAMAMAKPVVASPEAAEGIDALPGAELLVA-A------------------DPADFAAAILALLANPAEREEL 369 (397)
T ss_pred CCcccHHHHHHHcCCCEEecCcccccccccCCcceEeC-C------------------CHHHHHHHHHHHHcCHHHHHHH
Confidence 99999999999999999999975322222234676665 4 9999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 351 GKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 351 ~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++++++++.++|||+.+++++.++|.
T Consensus 370 ~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 370 GQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 99999998899999999999998875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-32 Score=250.21 Aligned_cols=335 Identities=24% Similarity=0.240 Sum_probs=239.7
Q ss_pred CCCCC---CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccc-----------------hhhcCCChhhhhHHHHHH
Q 043412 2 APFLS---GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSL-----------------QFWEGLPHHMRNLAVELY 61 (383)
Q Consensus 2 ~p~~~---~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~ 61 (383)
++.+. .||.+..+.++++.|.+.|+...+............. ................+.
T Consensus 5 ~~~~p~~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (377)
T cd03798 5 SSLYPPPNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAARALL 84 (377)
T ss_pred ccCCCCCCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccccccccccccCcchhhccccchhHHHHHHHHH
Confidence 44454 4999999999999999998875542221111111000 001111123344556677
Q ss_pred hhhc--CCCccEEEecCCCCCCCCc-ccccCCCCCCCCCCCcccccceeeeecCC---CCHHHHHhcCCCCEEEEeChHH
Q 043412 62 NTEC--RTNETVVICHSEPGAWYPP-LFDTLPCPPTPGYGDFMAVIGRTMFETDR---VSPEHVKRCNRMDFVWVPTDFH 135 (383)
Q Consensus 62 ~~~~--~~~pDiV~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ad~vi~~s~~~ 135 (383)
+.++ ..+||+||+|......... .+.... +.+.....++........ ........++++|.++++|+..
T Consensus 85 ~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~-----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 159 (377)
T cd03798 85 KLLKLKRFRPDLIHAHFAYPDGFAAALLKRKL-----GIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEAL 159 (377)
T ss_pred HHHhcccCCCCEEEEeccchHHHHHHHHHHhc-----CCCEEEEeecchhcccCchhhHHHHHHHHHhcCCeEEeCCHHH
Confidence 7787 8999999999533211111 111111 111122222222211111 1233344479999999999999
Q ss_pred HHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHH
Q 043412 136 VSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEE 215 (383)
Q Consensus 136 ~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l 215 (383)
++.+.+.+.+..++.++|||+|...+.+...... .+.. ...+.+.++++|++.+.||++.++++++.+
T Consensus 160 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~-------~~~~~~~i~~~g~~~~~k~~~~li~~~~~~ 227 (377)
T cd03798 160 ADELKALGIDPEKVTVIPNGVDTERFSPADRAEA-----RKLG-------LPEDKKVILFVGRLVPRKGIDYLIEALARL 227 (377)
T ss_pred HHHHHHhcCCCCceEEcCCCcCcccCCCcchHHH-----Hhcc-------CCCCceEEEEeccCccccCHHHHHHHHHHH
Confidence 9999986577789999999999887765433210 0000 135688999999999999999999999999
Q ss_pred hccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCCCCCChHHHHHHHcC
Q 043412 216 FSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMG 284 (383)
Q Consensus 216 ~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G 284 (383)
.++.++++++++|.+ .....+.+.++..+.. +++..+++.||++++|+..|++|++++|||++|
T Consensus 228 ~~~~~~~~l~i~g~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G 302 (377)
T cd03798 228 LKKRPDVHLVIVGDG-----PLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACG 302 (377)
T ss_pred HhcCCCeEEEEEcCC-----cchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcC
Confidence 888889999999987 3345566666555443 345688899999999999999999999999999
Q ss_pred CCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCC
Q 043412 285 LPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 363 (383)
+|||+++.++..+++.++ +|+++++. |+++++++|.+++++++. ++..++++.+.+.|+
T Consensus 303 ~pvI~~~~~~~~~~~~~~~~g~~~~~~------------------~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s 362 (377)
T cd03798 303 LPVVATDVGGIPEIITDGENGLLVPPG------------------DPEALAEAILRLLADPWL--RLGRAARRRVAERFS 362 (377)
T ss_pred CCEEEecCCChHHHhcCCcceeEECCC------------------CHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhh
Confidence 999999999999999886 66777766 999999999999999887 778888888899999
Q ss_pred HHHHHHHHHHHHHHH
Q 043412 364 PETVAGIVTDHIKDI 378 (383)
Q Consensus 364 ~~~~~~~~~~~~~~~ 378 (383)
|+.+++++.++|+++
T Consensus 363 ~~~~~~~~~~~~~~l 377 (377)
T cd03798 363 WENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998763
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=251.74 Aligned_cols=217 Identities=22% Similarity=0.237 Sum_probs=178.7
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
++.++.+++.|+.......... +..++.++|||+|.+.+.+...... +.... .+++.++++++|++.+
T Consensus 147 ~~~~~~i~~~s~~~~~~~~~~~-~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~i~~~G~~~~ 214 (375)
T cd03821 147 LQAAAAVHATSEQEAAEIRRLG-LKAPIAVIPNGVDIPPFAALPSRGR----RRKFP-------ILPDKRIILFLGRLHP 214 (375)
T ss_pred HhcCCEEEECCHHHHHHHHhhC-CcccEEEcCCCcChhccCcchhhhh----hhhcc-------CCCCCcEEEEEeCcch
Confidence 5789999999988777766643 4568999999999887765432110 01111 2467889999999999
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRG 270 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~ 270 (383)
.||++.+++++..+.++.++++|+++|.+.. .+...++..+...++. +++..+++.||++++||..
T Consensus 215 ~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~ 291 (375)
T cd03821 215 KKGLDLLIEAFAKLAERFPDWHLVIAGPDEG---GYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPSHS 291 (375)
T ss_pred hcCHHHHHHHHHHhhhhcCCeEEEEECCCCc---chHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEecccc
Confidence 9999999999999998889999999998633 3444555544555543 3566788999999999999
Q ss_pred CCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHH
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAK 350 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~ 350 (383)
|++|++++|||+||+|||+++.++..+++.+++|++++. +.++++++|.++++|++.++.|
T Consensus 292 e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~i~~l~~~~~~~~~~ 352 (375)
T cd03821 292 ENFGIVVAEALACGTPVVTTDKVPWQELIEYGCGWVVDD-------------------DVDALAAALRRALELPQRLKAM 352 (375)
T ss_pred CCCCcHHHHHHhcCCCEEEcCCCCHHHHhhcCceEEeCC-------------------ChHHHHHHHHHHHhCHHHHHHH
Confidence 999999999999999999999999999998877777664 5699999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHH
Q 043412 351 GKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 351 ~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
++++++.+.++|||+.+++++.
T Consensus 353 ~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 353 GENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHHHhcCHHHHHHHhh
Confidence 9999998899999999999875
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=247.25 Aligned_cols=298 Identities=16% Similarity=0.082 Sum_probs=207.4
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCC--cccchhh--------cCCChhhhhHHHHHHhhhcCCCccEEEec
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGD--LQSLQFW--------EGLPHHMRNLAVELYNTECRTNETVVICH 75 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~pDiV~~~ 75 (383)
..||.++++.+++++|.+.|+...+ .....+. ....... .............+.+++++.+||+||+|
T Consensus 17 ~~GG~~~~~~~l~~~L~~~g~~V~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~ 94 (335)
T cd03802 17 AYGGTERVVAALTEGLVARGHEVTL--FASGDSKTAAPLVPVVPEPLRLDAPGRDRAEAEALALAERALAAGDFDIVHNH 94 (335)
T ss_pred ccCcHHHHHHHHHHHHHhcCceEEE--EecCCCCcccceeeccCCCcccccchhhHhhHHHHHHHHHHHhcCCCCEEEec
Confidence 7899999999999999999886543 2221111 0000000 00111223445667778889999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCC
Q 043412 76 SEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQP 155 (383)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ng 155 (383)
.....+. .......+. +...++..... .. .........+.++++|+..++.+... .++.+||||
T Consensus 95 ~~~~~~~--~~~~~~~~~------v~~~h~~~~~~---~~-~~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~vi~ng 158 (335)
T cd03802 95 SLHLPLP--FARPLPVPV------VTTLHGPPDPE---LL-KLYYAARPDVPFVSISDAQRRPWPPL----PWVATVHNG 158 (335)
T ss_pred Ccccchh--hhcccCCCE------EEEecCCCCcc---cc-hHHHhhCcCCeEEEecHHHHhhcccc----cccEEecCC
Confidence 7655432 111111121 22222222111 11 13344677899999999998877554 589999999
Q ss_pred CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCC
Q 043412 156 VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGR 235 (383)
Q Consensus 156 id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~ 235 (383)
+|.+.+.+.. .++..++++|++.+.||++.+++++++ .+++|+++|.+...
T Consensus 159 vd~~~~~~~~----------------------~~~~~i~~~Gr~~~~Kg~~~li~~~~~-----~~~~l~i~G~~~~~-- 209 (335)
T cd03802 159 IDLDDYPFRG----------------------PKGDYLLFLGRISPEKGPHLAIRAARR-----AGIPLKLAGPVSDP-- 209 (335)
T ss_pred cChhhCCCCC----------------------CCCCEEEEEEeeccccCHHHHHHHHHh-----cCCeEEEEeCCCCH--
Confidence 9998876521 235568999999999999999999854 47999999998421
Q ss_pred chHH-HHHHH------HhhCCCC--CccccccccCceEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCccccccCC-Cc
Q 043412 236 DFGN-KIVNF------VEDSDLE--KPDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NG 304 (383)
Q Consensus 236 ~~~~-~~~~~------~~~~~~~--~~v~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g 304 (383)
.... ..... +..+|.. +++..+++.+|++++||. .|+||++++|||+||+|||+++.+|..|++.++ +|
T Consensus 210 ~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g 289 (335)
T cd03802 210 DYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTG 289 (335)
T ss_pred HHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcE
Confidence 1111 11111 1112322 345678999999999997 599999999999999999999999999999987 88
Q ss_pred eeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 305 YPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++++ ++++++++|.++.+.+. +++++.+.++|||+.++++|.++|+
T Consensus 290 ~l~~--------------------~~~~l~~~l~~l~~~~~------~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 290 FLVD--------------------SVEELAAAVARADRLDR------AACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred EEeC--------------------CHHHHHHHHHHHhccHH------HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 8876 69999999999866432 4566677899999999999999884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=248.49 Aligned_cols=321 Identities=21% Similarity=0.250 Sum_probs=228.4
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccch---------hhcCCChhhhhHHHHHHhhhcCCCccEE
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQ---------FWEGLPHHMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~pDiV 72 (383)
++.+..||.++.+..++++|.+.|+...+.............. ...............+.+.+++.+||+|
T Consensus 6 ~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 85 (353)
T cd03811 6 IPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKEKPDVV 85 (353)
T ss_pred eecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhcCCCEE
Confidence 4566689999999999999998887655322111111100000 0001122334455678888888999999
Q ss_pred EecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCH---HHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCC
Q 043412 73 ICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSP---EHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAK 148 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~ 148 (383)
|++.....+....+........ ....++........... .....++.+|.++++|+..++.+.+ ++.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~ 160 (353)
T cd03811 86 ISHLTTTPNVLALLAARLGTKL-----IVWEHNSLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDK 160 (353)
T ss_pred EEcCccchhHHHHHHhhcCCce-----EEEEcCcchhhhccchhHHHHHHhhccccceEEEeccchhhhHHHhhcCCccc
Confidence 9997611111111211111111 12222221111111111 2445579999999999999999988 4444679
Q ss_pred eEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEe
Q 043412 149 VVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLT 228 (383)
Q Consensus 149 i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G 228 (383)
+.++|||+|...+.+...... ... ..++.++++++|++.+.||++.++++++.+..+.++++|+++|
T Consensus 161 ~~vi~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G 227 (353)
T cd03811 161 IEVIYNPIDIEEIRALAEEPL------ELG-------IPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILG 227 (353)
T ss_pred cEEecCCcChhhcCcccchhh------hcC-------CCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEc
Confidence 999999999877655433210 001 2467899999999999999999999999998888899999999
Q ss_pred CCCCCCCchHHHHHHHHhhCCCC---------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccc
Q 043412 229 NPYHSGRDFGNKIVNFVEDSDLE---------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYL 299 (383)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v 299 (383)
.+ +..+.+.+.+..+++. +++..+++.||++++||..|++|++++|||++|+|||+++.++..|++
T Consensus 228 ~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i 302 (353)
T cd03811 228 DG-----PLREELEALAKELGLADRVHFLGFQSNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREIL 302 (353)
T ss_pred CC-----ccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHh
Confidence 87 3456666666666554 456688999999999999999999999999999999999999999999
Q ss_pred cCC-CceeeecccccccccCCCCcccccCCCHHHH---HHHHHHHhcCHHHHHHHHHHHHHHHHhcCC
Q 043412 300 TEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKL---RALMRLVVSNVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 300 ~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~l---a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 363 (383)
.++ +|++++.+ +.+++ ++++..+.++++.+.++++++++.+.++|+
T Consensus 303 ~~~~~g~~~~~~------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 303 EDGENGLLVPVG------------------DEAALAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred cCCCceEEECCC------------------CHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 885 88888776 88888 788888888999999999988888888776
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=254.00 Aligned_cols=210 Identities=17% Similarity=0.196 Sum_probs=168.6
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
++.+|.++++|+++++.+.+.+...+++.+|+||+|.+.+.+..... .++..+++++||+.+
T Consensus 187 ~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~~~------------------~~~~~~il~vgr~~~ 248 (419)
T cd03806 187 GSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPLDE------------------KTRENQILSIAQFRP 248 (419)
T ss_pred hhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccccc------------------ccCCcEEEEEEeecC
Confidence 68999999999999999988533335899999999987765432210 234678999999999
Q ss_pred ccCHHHHHHHHHHHhccCC-----CeEEEEEeCCCCC-CCchHHHHHHHHhhCCCCC-----------ccccccccCceE
Q 043412 202 RKGWDVLLKAYLEEFSKAD-----GVVLYLLTNPYHS-GRDFGNKIVNFVEDSDLEK-----------PDDGWAPAADVF 264 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~-----~~~l~i~G~~~~~-~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~adi~ 264 (383)
.||++.+++|+..+.++.| +++|+|+|++... +.++.++++++++++++.+ ++..+|+.||++
T Consensus 249 ~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~adv~ 328 (419)
T cd03806 249 EKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELSTASIG 328 (419)
T ss_pred CCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHhCeEE
Confidence 9999999999999987765 4999999987432 2346688888998888764 345788999999
Q ss_pred EecCCCCCCChHHHHHHHcCCCEEEcCCCCc-ccccc---C-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLPVIATNWSGP-TEYLT---E-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~-~e~v~---~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
++|+..|+||++++|||+||+|||+++.+|. .|++. + .+|++++ |+++++++|.+
T Consensus 329 v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--------------------d~~~la~ai~~ 388 (419)
T cd03806 329 LHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--------------------TAEEYAEAIEK 388 (419)
T ss_pred EECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--------------------CHHHHHHHHHH
Confidence 9999999999999999999999999998764 57776 4 4777764 89999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 043412 340 VVSNVDEAKAKGKQAREDMIQRFSPETVAG 369 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~ 369 (383)
++++++....+..++++.+.++||++.+.+
T Consensus 389 ll~~~~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 389 ILSLSEEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHhCCHHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 999765443333555555789999998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=239.93 Aligned_cols=330 Identities=19% Similarity=0.186 Sum_probs=226.6
Q ss_pred CCCCC--CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhc------------C-----CChhhhhHHHHHH
Q 043412 1 MAPFL--SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWE------------G-----LPHHMRNLAVELY 61 (383)
Q Consensus 1 ~~p~~--~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~~~~l~ 61 (383)
++||| +.||+++|.+.+.+.|-+.||...+ ..-+.|+..-..... . +| .....+.-+.
T Consensus 6 Vsdff~P~~ggveshiy~lSq~li~lghkVvv--ithayg~r~girylt~glkVyylp~~v~~n~tT~p-tv~~~~Pllr 82 (426)
T KOG1111|consen 6 VSDFFYPSTGGVESHIYALSQCLIRLGHKVVV--ITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFP-TVFSDFPLLR 82 (426)
T ss_pred eCcccccCCCChhhhHHHhhcchhhcCCeEEE--EeccccCccceeeecCCceEEEEeeeeeecccchh-hhhccCcccc
Confidence 35666 5699999999999999999985321 111222221110000 0 11 0111122344
Q ss_pred hhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCC-----CHHHHHhcCCCCEEEEeChHHH
Q 043412 62 NTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRV-----SPEHVKRCNRMDFVWVPTDFHV 136 (383)
Q Consensus 62 ~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ad~vi~~s~~~~ 136 (383)
.++.+++..+||.|+..+......+.. .+.. +.....+.+. ++..... .+.....+...|.+||+|...+
T Consensus 83 ~i~lrE~I~ivhghs~fS~lahe~l~h--artM-GlktVfTdHS--lfGfad~~si~~n~ll~~sL~~id~~IcVshtsk 157 (426)
T KOG1111|consen 83 PILLRERIEIVHGHSPFSYLAHEALMH--ARTM-GLKTVFTDHS--LFGFADIGSILTNKLLPLSLANIDRIICVSHTSK 157 (426)
T ss_pred hhhhhhceEEEecCChHHHHHHHHHHH--HHhc-CceEEEeccc--cccccchhhhhhcceeeeeecCCCcEEEEeecCC
Confidence 556677999999998655322111110 0111 1111222222 1111111 1112222688999999999988
Q ss_pred HHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHH
Q 043412 137 STFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEE 215 (383)
Q Consensus 137 ~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l 215 (383)
+...- -..+++++.+|||.++...|.|...... +.+...++.++|+-.+||+|.++++++++
T Consensus 158 entvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~-----------------S~~i~~ivv~sRLvyrKGiDll~~iIp~v 220 (426)
T KOG1111|consen 158 ENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKP-----------------SADIITIVVASRLVYRKGIDLLLEIIPSV 220 (426)
T ss_pred CceEEEeccCHhHeeeccceeeccccccCccccC-----------------CCCeeEEEEEeeeeeccchHHHHHHHHHH
Confidence 85443 4567889999999999999998655421 23458899999999999999999999999
Q ss_pred hccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCCCCCChHHHHHHHcC
Q 043412 216 FSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMG 284 (383)
Q Consensus 216 ~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G 284 (383)
.+++|+++|+|+|+| +-+..+++..+++.++ +++...+...|+|++||..|+||++++||++||
T Consensus 221 c~~~p~vrfii~GDG-----Pk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScG 295 (426)
T KOG1111|consen 221 CDKHPEVRFIIIGDG-----PKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCG 295 (426)
T ss_pred HhcCCCeeEEEecCC-----cccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCC
Confidence 999999999999999 4456666666666665 556788899999999999999999999999999
Q ss_pred CCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCH
Q 043412 285 LPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSP 364 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~ 364 (383)
+|||++.+||.+|++.++.-.+ .+.+++++++++.+++..-... -....+.+.+-|+|
T Consensus 296 L~VVsTrVGGIpeVLP~d~i~~-------------------~~~~~~dl~~~v~~ai~~~~~~---p~~~h~~v~~~y~w 353 (426)
T KOG1111|consen 296 LPVVSTRVGGIPEVLPEDMITL-------------------GEPGPDDLVGAVEKAITKLRTL---PLEFHDRVKKMYSW 353 (426)
T ss_pred CEEEEeecCCccccCCccceec-------------------cCCChHHHHHHHHHHHHHhccC---chhHHHHHHHhccH
Confidence 9999999999999998762222 2237888888888877632211 22334456788999
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 043412 365 ETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~ 382 (383)
+.++++-++.|.++...+
T Consensus 354 ~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 354 KDVAERTEKVYDRAATTS 371 (426)
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 999999999999987654
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-32 Score=248.40 Aligned_cols=210 Identities=21% Similarity=0.195 Sum_probs=165.5
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
++.+|.++++|+..++.+.+ ++.+ . .+||||+|...+.+.... .....+ .+ ...++++|++.
T Consensus 141 ~~~ad~ii~~s~~~~~~~~~~~~~~--~-~~i~ngv~~~~~~~~~~~------~~~~~~-------~~-~~~i~~~G~~~ 203 (363)
T cd04955 141 VKFADRLIADSPGIKEYLKEKYGRD--S-TYIPYGADHVVSSEEDEI------LKKYGL-------EP-GRYYLLVGRIV 203 (363)
T ss_pred HhhccEEEeCCHHHHHHHHHhcCCC--C-eeeCCCcChhhcchhhhh------HHhcCC-------CC-CcEEEEEeccc
Confidence 68899999999999999955 6654 3 899999998765541110 111111 22 34578999999
Q ss_pred cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCC
Q 043412 201 YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~ 269 (383)
+.||++.+++|++++.. +++|+++|+++.. ..+.+.+.+ ..+.. +++..++..||++++||.
T Consensus 204 ~~Kg~~~li~a~~~l~~---~~~l~ivG~~~~~-~~~~~~~~~---~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~ 276 (363)
T cd04955 204 PENNIDDLIEAFSKSNS---GKKLVIVGNADHN-TPYGKLLKE---KAAADPRIIFVGPIYDQELLELLRYAALFYLHGH 276 (363)
T ss_pred ccCCHHHHHHHHHhhcc---CceEEEEcCCCCc-chHHHHHHH---HhCCCCcEEEccccChHHHHHHHHhCCEEEeCCc
Confidence 99999999999988743 7999999987431 223333332 22222 345678899999999999
Q ss_pred C-CCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 270 G-EGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 270 ~-e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
. |++|++++|||+||+|||+|+.++..|++++ +|+++++. +. ++++|.++++|++.+.
T Consensus 277 ~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~-~g~~~~~~------------------~~--l~~~i~~l~~~~~~~~ 335 (363)
T cd04955 277 SVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD-KAIYFKVG------------------DD--LASLLEELEADPEEVS 335 (363)
T ss_pred cCCCCChHHHHHHHcCCCEEEecCCccceeecC-CeeEecCc------------------hH--HHHHHHHHHhCHHHHH
Confidence 8 9999999999999999999999999999876 67666643 44 9999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++++++++.+.++|||+.+++++.++|+
T Consensus 336 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 336 AMAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999998889999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=251.59 Aligned_cols=328 Identities=19% Similarity=0.133 Sum_probs=225.5
Q ss_pred CChhHHHHHHHHHHHhcccCCCceeeeecCCCcc-c-----------chhhcCCChhhhhHHHHHHhhhcCCCccEEEec
Q 043412 8 GGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ-S-----------LQFWEGLPHHMRNLAVELYNTECRTNETVVICH 75 (383)
Q Consensus 8 ~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~ 75 (383)
||.+..+..++++|.++|+...+ .+....... . ....... .........+.+.+++.+||+||++
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~pdii~~~ 90 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLV--IAPGPFRESEGPARVVPVPSVPLPGYPEI-RLALPPRRRVRRLLDAFAPDVVHIA 90 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEE--EeCCchhhccCCCCceeecccccCcccce-EecccchhhHHHHHHhcCCCEEEEe
Confidence 89999999999999999986543 222111100 0 0000000 1112234556677788899999998
Q ss_pred CCCCCCC-Cccccc-CCCCCCCCCCCcccccceee---eecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeE
Q 043412 76 SEPGAWY-PPLFDT-LPCPPTPGYGDFMAVIGRTM---FETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVV 150 (383)
Q Consensus 76 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~ 150 (383)
+...... ...+.. ..++.+..++.......... +............++.+|.++++|+..++.+.+.+. .++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~--~~~~ 168 (364)
T cd03814 91 TPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRARGF--RRVR 168 (364)
T ss_pred ccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhccCC--Ccee
Confidence 6433211 111111 11222211111110000000 000000122333468899999999999997766554 4899
Q ss_pred EecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCC
Q 043412 151 KIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNP 230 (383)
Q Consensus 151 vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~ 230 (383)
+++||+|.+.+.+........ .+.. .++.++++++|++.+.||++.++++++++.++ ++++|+++|++
T Consensus 169 ~~~~g~~~~~~~~~~~~~~~~---~~~~--------~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~~~l~i~G~~ 236 (364)
T cd03814 169 LWPRGVDTELFHPRRRDEALR---ARLG--------PPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PPVRLVIVGDG 236 (364)
T ss_pred ecCCCccccccCcccccHHHH---HHhC--------CCCCeEEEEEeccccccCHHHHHHHHHHhhhc-CCceEEEEeCC
Confidence 999999988776544321110 0000 24578899999999999999999999999887 89999999987
Q ss_pred CCCCCchHHHHH---HHHhhCCC--CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC-CCc
Q 043412 231 YHSGRDFGNKIV---NFVEDSDL--EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENG 304 (383)
Q Consensus 231 ~~~~~~~~~~~~---~~~~~~~~--~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~~g 304 (383)
+. ...++ ..+...|. .+++..+++.||++++||..|++|++++|||+||+|||+++.++..+++.+ ++|
T Consensus 237 ~~-----~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g 311 (364)
T cd03814 237 PA-----RARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENG 311 (364)
T ss_pred ch-----HHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcce
Confidence 32 23332 11222332 356788999999999999999999999999999999999999999999988 477
Q ss_pred eeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 305 YPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+++++. |.++++++|.++++|++.+++|++++++.+ ++|+|+.+++++.++|+
T Consensus 312 ~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 312 LLVEPG------------------DAEAFAAALAALLADPELRRRMAARARAEA-ERRSWEAFLDNLLEAYR 364 (364)
T ss_pred EEcCCC------------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-hhcCHHHHHHHHHHhhC
Confidence 777766 999999999999999999999999999976 88999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-32 Score=249.58 Aligned_cols=267 Identities=13% Similarity=0.068 Sum_probs=185.2
Q ss_pred HHHHHhhhcCCCccEEEecCCCC-CCC--CcccccCCCCCCCCCCCcc-cccceee--eecCCC---CHHHHHhcCCCCE
Q 043412 57 AVELYNTECRTNETVVICHSEPG-AWY--PPLFDTLPCPPTPGYGDFM-AVIGRTM--FETDRV---SPEHVKRCNRMDF 127 (383)
Q Consensus 57 ~~~l~~~~~~~~pDiV~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~---~~~~~~~~~~ad~ 127 (383)
..++.+.+++++|||||+|++.. +|. ...+.......+.+||... .+..++. +....+ ...|... ..+|.
T Consensus 105 ~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~~~~~~r-~~~d~ 183 (462)
T PLN02846 105 VGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIVHTNYLEYVKREKNGRVKAFLLKYINSWVVD-IYCHK 183 (462)
T ss_pred hHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCcEEEEECCChHHHHHHhccchHHHHHHHHHHHHHHH-HhcCE
Confidence 35688888999999999998754 342 1122222222221233211 1111100 000000 0111111 34899
Q ss_pred EEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCC--cEEEEEeeccccccCH
Q 043412 128 VWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSK--EFVFLSVFKWEYRKGW 205 (383)
Q Consensus 128 vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~i~~~g~~~~~K~~ 205 (383)
++++|+...+ +.+ .+.+..+|||.+.|.+...... .... .++ .++++|+||+.+.||+
T Consensus 184 vi~pS~~~~~-l~~------~~i~~v~GVd~~~f~~~~~~~~-----~~~~--------~~~~~~~~~l~vGRL~~eK~~ 243 (462)
T PLN02846 184 VIRLSAATQD-YPR------SIICNVHGVNPKFLEIGKLKLE-----QQKN--------GEQAFTKGAYYIGKMVWSKGY 243 (462)
T ss_pred EEccCHHHHH-Hhh------CEEecCceechhhcCCCcccHh-----hhcC--------CCCCcceEEEEEecCcccCCH
Confidence 9999986655 432 2344458999998876543210 0000 122 3578999999999999
Q ss_pred HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-------CccccccccCceEEecCCCCCCChHHH
Q 043412 206 DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-------KPDDGWAPAADVFVLPSRGEGWGRPLV 278 (383)
Q Consensus 206 ~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~adi~v~ps~~e~~~~~~~ 278 (383)
+.+++|+.++.+..++++|+|+|+| +..+++++.++++++. .+...+++.+|+||+||.+|++|++++
T Consensus 244 ~~Li~a~~~l~~~~~~~~l~ivGdG-----p~~~~L~~~a~~l~l~~~vf~G~~~~~~~~~~~DvFv~pS~~Et~g~v~l 318 (462)
T PLN02846 244 KELLKLLHKHQKELSGLEVDLYGSG-----EDSDEVKAAAEKLELDVRVYPGRDHADPLFHDYKVFLNPSTTDVVCTTTA 318 (462)
T ss_pred HHHHHHHHHHHhhCCCeEEEEECCC-----ccHHHHHHHHHhcCCcEEEECCCCCHHHHHHhCCEEEECCCcccchHHHH
Confidence 9999999999888899999999999 5678888888887764 233468899999999999999999999
Q ss_pred HHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 279 EAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 279 Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
||||||+|||+++.++ .+++.++ ||++++ |.+++++++.+++.++. ..++.++
T Consensus 319 EAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--------------------~~~~~a~ai~~~l~~~~--~~~~~~a--- 372 (462)
T PLN02846 319 EALAMGKIVVCANHPS-NEFFKQFPNCRTYD--------------------DGKGFVRATLKALAEEP--APLTDAQ--- 372 (462)
T ss_pred HHHHcCCcEEEecCCC-cceeecCCceEecC--------------------CHHHHHHHHHHHHccCc--hhHHHHH---
Confidence 9999999999999987 5888765 777775 89999999999998543 2233332
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q 043412 358 MIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~~ 376 (383)
.+.|||+..++++.++|+
T Consensus 373 -~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 373 -RHELSWEAATERFLRVAD 390 (462)
T ss_pred -HHhCCHHHHHHHHHHHhc
Confidence 358999999999999986
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=245.66 Aligned_cols=315 Identities=18% Similarity=0.136 Sum_probs=218.5
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccc----hhhc-------CC----------ChhhhhHHHHHHhhh
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSL----QFWE-------GL----------PHHMRNLAVELYNTE 64 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~----~~~~-------~~----------~~~~~~~~~~l~~~~ 64 (383)
..||.++++.+++++|.++|+...+............. .... .. ..........+.+++
T Consensus 13 ~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (359)
T cd03823 13 SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAVVAEFARLL 92 (359)
T ss_pred cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccccceeeccccccccCCCchhhhhHHHhccCHHHHHHHHHHH
Confidence 35899999999999999998865542211111110000 0000 00 011122345667788
Q ss_pred cCCCccEEEecCCCCCCCCc--ccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhc
Q 043412 65 CRTNETVVICHSEPGAWYPP--LFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRS 142 (383)
Q Consensus 65 ~~~~pDiV~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~ 142 (383)
++.+||+||+|+........ ......++.+ ...+..+.. ...........|.++++|+..++.+.+.
T Consensus 93 ~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i------~~~hd~~~~-----~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 161 (359)
T cd03823 93 EDFRPDVVHFHHLQGLGVSILRAARDRGIPIV------LTLHDYWLI-----CPRQGLFKKGGDAVIAPSRFLLDRYVAN 161 (359)
T ss_pred HHcCCCEEEECCccchHHHHHHHHHhcCCCEE------EEEeeeeee-----cchhhhhccCCCEEEEeCHHHHHHHHHc
Confidence 88999999999752211110 1111112222 222222111 0111111234499999999999999997
Q ss_pred CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCe
Q 043412 143 GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGV 222 (383)
Q Consensus 143 ~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~ 222 (383)
+.++.++.+++||+|...+.+.... .+.+.++++++|++.+.||++.++++++.+.+ +++
T Consensus 162 ~~~~~~~~vi~n~~~~~~~~~~~~~------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~~ 221 (359)
T cd03823 162 GLFAEKISVIRNGIDLDRAKRPRRA------------------PPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--GDI 221 (359)
T ss_pred CCCccceEEecCCcChhhccccccC------------------CCCCceEEEEEecCccccCHHHHHHHHHHHHh--cCc
Confidence 7666799999999998776544320 13567899999999999999999999999866 799
Q ss_pred EEEEEeCCCCCCCchHHHHH----HHHhhCCCC--CccccccccCceEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCc
Q 043412 223 VLYLLTNPYHSGRDFGNKIV----NFVEDSDLE--KPDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 223 ~l~i~G~~~~~~~~~~~~~~----~~~~~~~~~--~~v~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+|+++|.+.... ..... ..+...|.. +++..+++.||++++||. .|++|++++|||+||+|||+++.++.
T Consensus 222 ~l~i~G~~~~~~---~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~ 298 (359)
T cd03823 222 ELVIVGNGLELE---EESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGM 298 (359)
T ss_pred EEEEEcCchhhh---HHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCH
Confidence 999999873311 11111 112223333 677889999999999997 79999999999999999999999999
Q ss_pred cccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 296 TEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 296 ~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
.|++.++ +|++++++ |++++++++.++++|++.++.|++++++... .+.+++++.++
T Consensus 299 ~e~i~~~~~g~~~~~~------------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 356 (359)
T cd03823 299 AELVRDGVNGLLFPPG------------------DAEDLAAALERLIDDPDLLERLRAGIEPPRS----IEDQAEEYLKL 356 (359)
T ss_pred HHHhcCCCcEEEECCC------------------CHHHHHHHHHHHHhChHHHHHHHHhHHHhhh----HHHHHHHHHHH
Confidence 9999886 77777766 9999999999999999999999999877543 38899999888
Q ss_pred HH
Q 043412 375 IK 376 (383)
Q Consensus 375 ~~ 376 (383)
|+
T Consensus 357 ~~ 358 (359)
T cd03823 357 YR 358 (359)
T ss_pred hh
Confidence 86
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=249.24 Aligned_cols=216 Identities=16% Similarity=0.165 Sum_probs=170.5
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccc-------------cCCccccccCCCCCCC
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLA-------------SIGKPVLGLSNMNTSS 188 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~-------------~~~~~~l~~~~~~~~~ 188 (383)
++.+|.|+++|+..++.+.+++.+++++.+||||. ...|.+......... ......+ .++
T Consensus 158 ~~~ad~ii~vS~~~~~~l~~~~~~~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 230 (415)
T cd03816 158 GRLADYNLCVTKAMKEDLQQFNNWKIRATVLYDRP-PEQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQL------SEE 230 (415)
T ss_pred hhcCCEeeecCHHHHHHHHhhhccCCCeeecCCCC-HHHceeCcHHHHHHHHHhcccccccccccccccee------cCC
Confidence 58899999999999999988888889999999994 445554332110000 0001111 134
Q ss_pred CcEEEEEeeccccccCHHHHHHHHHHHhc------cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------
Q 043412 189 KEFVFLSVFKWEYRKGWDVLLKAYLEEFS------KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE----------- 251 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~------~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~----------- 251 (383)
+..+++++||+.+.||++.+++|+..+.+ +.|+++|+++|+| +..+.++++++++++.
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G-----~~~~~l~~~~~~~~l~~~~~~~g~~~~ 305 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKG-----PLKEKYLERIKELKLKKVTIRTPWLSA 305 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecC-----ccHHHHHHHHHHcCCCcEEEEcCcCCH
Confidence 56788889999999999999999999875 3478999999998 4578888888887764
Q ss_pred CccccccccCceEEecC---CCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccC
Q 043412 252 KPDDGWAPAADVFVLPS---RGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAE 327 (383)
Q Consensus 252 ~~v~~~~~~adi~v~ps---~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~ 327 (383)
+++..+|+.||++++|+ ..|++|++++|||+||+|||+++.++..|+++++ +|++++
T Consensus 306 ~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~------------------- 366 (415)
T cd03816 306 EDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG------------------- 366 (415)
T ss_pred HHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC-------------------
Confidence 34567789999999753 3578999999999999999999999999999886 888774
Q ss_pred CCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 043412 328 PSVDKLRALMRLVVSN---VDEAKAKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 328 ~~~~~la~~i~~ll~~---~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
|+++++++|.++++| ++.+++|++++++.. .++|+....+.
T Consensus 367 -d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~--~~~~~~~~~~~ 410 (415)
T cd03816 367 -DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES--ELRWDENWDRV 410 (415)
T ss_pred -CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh--hcCHHHHHHHH
Confidence 899999999999999 899999999999864 56776655543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-31 Score=246.10 Aligned_cols=210 Identities=19% Similarity=0.155 Sum_probs=178.4
Q ss_pred hcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc
Q 043412 121 RCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW 199 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~ 199 (383)
.++.+|.++++|+..++.+.+ ++...+++.+++||++...+.+... .++.+.++++|++
T Consensus 180 ~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~~--------------------~~~~~~il~~Grl 239 (407)
T cd04946 180 LLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKPS--------------------KDDTLRIVSCSYL 239 (407)
T ss_pred HHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCCCC--------------------CCCCEEEEEeecc
Confidence 368999999999999999987 7777789999999998765543211 2457889999999
Q ss_pred ccccCHHHHHHHHHHHhccCC--CeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC-----------ccccccc--cCceE
Q 043412 200 EYRKGWDVLLKAYLEEFSKAD--GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-----------PDDGWAP--AADVF 264 (383)
Q Consensus 200 ~~~K~~~~ll~a~~~l~~~~~--~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~--~adi~ 264 (383)
.+.||++.+++|+.++.++.| +++++++|+| +..+.++++++..+..+ ++..+|+ .+|++
T Consensus 240 ~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g-----~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~ 314 (407)
T cd04946 240 VPVKRVDLIIKALAALAKARPSIKIKWTHIGGG-----PLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVF 314 (407)
T ss_pred ccccCHHHHHHHHHHHHHhCCCceEEEEEEeCc-----hHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEE
Confidence 999999999999999988876 4667889987 45677777776554432 3446664 47899
Q ss_pred EecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcC
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSN 343 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~ 343 (383)
++||..||+|++++|||+||+|||+|+.+|..|++.++ +|++++..+ |+++++++|.++++|
T Consensus 315 v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~-----------------~~~~la~~I~~ll~~ 377 (407)
T cd04946 315 VNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDP-----------------TPNELVSSLSKFIDN 377 (407)
T ss_pred EeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCC-----------------CHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999997 888776532 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 344 VDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 344 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
++.+.+|+++|++.+.++|+|+...+++.
T Consensus 378 ~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 378 EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999999999999999988875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-31 Score=243.36 Aligned_cols=209 Identities=23% Similarity=0.296 Sum_probs=176.4
Q ss_pred HhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW 199 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~ 199 (383)
..++++|.++++|+..++.+.+......++.+||||++...+.+.... ..+...++++||+
T Consensus 153 ~~~~~~d~ii~~s~~~~~~l~~~~~~~~~v~~ip~g~~~~~~~~~~~~-------------------~~~~~~i~~vgrl 213 (372)
T cd04949 153 ENLDKVDGVIVATEQQKQDLQKQFGNYNPIYTIPVGSIDPLKLPAQFK-------------------QRKPHKIITVARL 213 (372)
T ss_pred hChhhCCEEEEccHHHHHHHHHHhCCCCceEEEcccccChhhcccchh-------------------hcCCCeEEEEEcc
Confidence 346889999999999999988733233459999999998766543200 2345679999999
Q ss_pred ccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC---------CCccccccccCceEEecCCC
Q 043412 200 EYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL---------EKPDDGWAPAADVFVLPSRG 270 (383)
Q Consensus 200 ~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~adi~v~ps~~ 270 (383)
.+.||++.+++++.++.++.|+++|+++|.| +....+...++.+++ .+++..+|+.||++++||..
T Consensus 214 ~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~S~~ 288 (372)
T cd04949 214 APEKQLDQLIKAFAKVVKQVPDATLDIYGYG-----DEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSLLTSQS 288 (372)
T ss_pred CcccCHHHHHHHHHHHHHhCCCcEEEEEEeC-----chHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEEecccc
Confidence 9999999999999999999999999999988 334555655555544 35667889999999999999
Q ss_pred CCCChHHHHHHHcCCCEEEcCCC-CccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWS-GPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~-g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
||||++++|||++|+|||+++.+ |..+++.++ +|+++++. |+++++++|..+++|++.++
T Consensus 289 Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~------------------d~~~la~~i~~ll~~~~~~~ 350 (372)
T cd04949 289 EGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKG------------------DIEALAEAIIELLNDPKLLQ 350 (372)
T ss_pred cccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCC------------------cHHHHHHHHHHHHcCHHHHH
Confidence 99999999999999999999987 889999885 88888876 99999999999999999999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
+|++++++. .++|||+.++++|
T Consensus 351 ~~~~~a~~~-~~~~s~~~~~~~w 372 (372)
T cd04949 351 KFSEAAYEN-AERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHH-HHHhhHHHHHhcC
Confidence 999999997 7899999998864
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=239.72 Aligned_cols=330 Identities=19% Similarity=0.186 Sum_probs=225.6
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchh---hcCCC---------hhhhhHHHHHHhhhcCCCccEEE
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQF---WEGLP---------HHMRNLAVELYNTECRTNETVVI 73 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~---------~~~~~~~~~l~~~~~~~~pDiV~ 73 (383)
..||.+..+++++++|.+.|+...+ .....+....... ....+ .........+...+++.+||+||
T Consensus 12 ~~~G~~~~~~~l~~~L~~~g~~v~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~ 89 (374)
T cd03817 12 QVNGVATSIRRLAEELEKRGHEVYV--VAPSYPGAPEEEEVVVVRPFRVPTFKYPDFRLPLPIPRALIIILKELGPDIVH 89 (374)
T ss_pred CCCCeehHHHHHHHHHHHcCCeEEE--EeCCCCCCCcccccccccccccccchhhhhhccccHHHHHHHHHhhcCCCEEE
Confidence 4589999999999999999876543 2222211111000 00000 01122233445567888999999
Q ss_pred ecCCCCCCCCcc-cc-cCCCCCCCCCCCccccc----ceeeeecCCCC--HHHHHhcCCCCEEEEeChHHHHHHHhcCCC
Q 043412 74 CHSEPGAWYPPL-FD-TLPCPPTPGYGDFMAVI----GRTMFETDRVS--PEHVKRCNRMDFVWVPTDFHVSTFIRSGVD 145 (383)
Q Consensus 74 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~ 145 (383)
+|+......... +. ...++.+..++...... ........... ......++.+|.++++|+..++.+.+++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~~~ 169 (374)
T cd03817 90 THTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREYGVK 169 (374)
T ss_pred ECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhcCCC
Confidence 997532211111 11 11122221111111100 00000000001 122334689999999999999999887765
Q ss_pred CCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEE
Q 043412 146 PAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLY 225 (383)
Q Consensus 146 ~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~ 225 (383)
.++.++|||+|...+.+...... ..... ..++.+.++++|++.+.||++.+++++..+.++.++++++
T Consensus 170 -~~~~vi~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~ 237 (374)
T cd03817 170 -RPIEVIPTGIDLDRFEPVDGDDE----RRKLG-------IPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLV 237 (374)
T ss_pred -CceEEcCCccchhccCccchhHH----HHhcC-------CCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEE
Confidence 46999999999887765433211 01111 2456789999999999999999999999998888899999
Q ss_pred EEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC
Q 043412 226 LLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG 294 (383)
Q Consensus 226 i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g 294 (383)
++|++ +..+.+++.++.+++. +++..+++.||++++||..|++|++++|||+||+|||+++.++
T Consensus 238 i~G~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~ 312 (374)
T cd03817 238 IVGDG-----PEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPG 312 (374)
T ss_pred EEeCC-----chHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCC
Confidence 99987 4566777777666554 4566788999999999999999999999999999999999999
Q ss_pred ccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 295 PTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 295 ~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
..+++.++ +|++++.+ +. ++++++.+++++++.++.|++++++.+.+ ++ +++++.+
T Consensus 313 ~~~~i~~~~~g~~~~~~------------------~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~ 369 (374)
T cd03817 313 LPDLVADGENGFLFPPG------------------DE-ALAEALLRLLQDPELRRRLSKNAEESAEK-FS---FAKKVEK 369 (374)
T ss_pred hhhheecCceeEEeCCC------------------CH-HHHHHHHHHHhChHHHHHHHHHHHHHHHH-HH---HHHHHHH
Confidence 99999984 88888765 55 99999999999999999999999997654 44 6666766
Q ss_pred HHHH
Q 043412 374 HIKD 377 (383)
Q Consensus 374 ~~~~ 377 (383)
+|++
T Consensus 370 ~~~~ 373 (374)
T cd03817 370 LYEE 373 (374)
T ss_pred HHhc
Confidence 6654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=242.66 Aligned_cols=216 Identities=22% Similarity=0.266 Sum_probs=179.1
Q ss_pred hcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
.++.+|.++++|+..++.+...+.+..++.++|||++...+.+...... ..+.. ..++.++++++|++.
T Consensus 162 ~~~~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~i~~~G~~~ 230 (394)
T cd03794 162 IYRRADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADES----LRKEL-------GLDDKFVVLYAGNIG 230 (394)
T ss_pred HHhcCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhh----hhhcc-------CCCCcEEEEEecCcc
Confidence 3689999999999999999877777789999999999876655432210 00001 145689999999999
Q ss_pred cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC----------CccccccccCceEEecCCC
Q 043412 201 YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE----------KPDDGWAPAADVFVLPSRG 270 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~----------~~v~~~~~~adi~v~ps~~ 270 (383)
+.||++.+++++.++.+. ++++|+++|.+ ...+.+.+.+...+.. +++..+|+.||++++|+..
T Consensus 231 ~~k~~~~l~~~~~~l~~~-~~~~l~i~G~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~ 304 (394)
T cd03794 231 RAQGLDTLLEAAALLKDR-PDIRFLIVGDG-----PEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKP 304 (394)
T ss_pred cccCHHHHHHHHHHHhhc-CCeEEEEeCCc-----ccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeEEeccC
Confidence 999999999999999877 89999999987 3345555544433322 4677899999999999987
Q ss_pred CCC-----ChHHHHHHHcCCCEEEcCCCCccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCH
Q 043412 271 EGW-----GRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344 (383)
Q Consensus 271 e~~-----~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~ 344 (383)
|++ |++++|||++|+|||+++.++..+.+.+ ++|++++.+ |+++++++|.++++|+
T Consensus 305 ~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~------------------~~~~l~~~i~~~~~~~ 366 (394)
T cd03794 305 GPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPG------------------DPEALAAAILELLDDP 366 (394)
T ss_pred cccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCC------------------CHHHHHHHHHHHHhCh
Confidence 765 7889999999999999999999999988 477777766 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 043412 345 DEAKAKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 345 ~~~~~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
+.+++|++++++.+.++|||+.+++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 367 EERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999999988899999999886
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=229.25 Aligned_cols=240 Identities=14% Similarity=0.142 Sum_probs=177.7
Q ss_pred HHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEe
Q 043412 117 EHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSV 196 (383)
Q Consensus 117 ~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~ 196 (383)
.+.+.+.+.+.+|++|+.+++.+++.|++.. + +|++|+|++.|.+....... .+.+.... .++.++++++
T Consensus 85 ~y~~~m~~~~~vIavS~~t~~~L~~~G~~~~-i-~I~~GVD~~~f~p~~~~~~~--~r~~~~~~------~~~~~~i~~v 154 (335)
T PHA01633 85 IVNKYLLQDVKFIPNSKFSAENLQEVGLQVD-L-PVFHGINFKIVENAEKLVPQ--LKQKLDKD------FPDTIKFGIV 154 (335)
T ss_pred HHHHHHhcCCEEEeCCHHHHHHHHHhCCCCc-e-eeeCCCChhhcCccchhhHH--HHHHhCcC------CCCCeEEEEE
Confidence 4444556677999999999999999887643 3 57899999888764421110 01111110 2467899999
Q ss_pred eccccccCHHHHHHHHHHHhccCCC----eEEEEEeCCCCCCCchHH-HHHHHHhhC---CC--CCccccccccCceEEe
Q 043412 197 FKWEYRKGWDVLLKAYLEEFSKADG----VVLYLLTNPYHSGRDFGN-KIVNFVEDS---DL--EKPDDGWAPAADVFVL 266 (383)
Q Consensus 197 g~~~~~K~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~~~~-~~~~~~~~~---~~--~~~v~~~~~~adi~v~ 266 (383)
||+.++||++.+++|++++.++.|+ ++++++|.+ ...+ .+.+.+... |. .+++..+|+.||++|+
T Consensus 155 GRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~ 229 (335)
T PHA01633 155 SGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIV 229 (335)
T ss_pred eCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH-----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEE
Confidence 9999999999999999999887765 578777742 1110 011112222 11 2456788999999999
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeeccccccccc-CCCCcccccCCCHHHHHHHHHHHhcCHH
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTE-GPFKGHFWAEPSVDKLRALMRLVVSNVD 345 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~-~~~~g~~~~~~~~~~la~~i~~ll~~~~ 345 (383)
||.+|+||++++|||+||+|||+++.+++.|++.++.+++++.++..+..+ ..+.|+.++..|+++++++|.+++...+
T Consensus 230 PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~ 309 (335)
T PHA01633 230 PSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD 309 (335)
T ss_pred CCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999887789988777666554 3466788889999999999999965432
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 346 EAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 346 ~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
+..++.++++. ++.|+|++++++|.+
T Consensus 310 -~~~~~~~~~~~-a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 310 -REERSMKLKEL-AKKYDIRNLYTRFLE 335 (335)
T ss_pred -hhhhhHHHHHH-HHhcCHHHHHHHhhC
Confidence 23336677764 789999999999863
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=235.35 Aligned_cols=266 Identities=14% Similarity=0.083 Sum_probs=181.8
Q ss_pred HHHHHhhhcCCCccEEEecCCCC-CCC--CcccccCCCCCCCCCCCcc-cccceeeeecCCCCH-------HHHHhcCCC
Q 043412 57 AVELYNTECRTNETVVICHSEPG-AWY--PPLFDTLPCPPTPGYGDFM-AVIGRTMFETDRVSP-------EHVKRCNRM 125 (383)
Q Consensus 57 ~~~l~~~~~~~~pDiV~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~a 125 (383)
.-.+.+.+..++|||||.+++.. +|. ...++....+.+..||... .+..+.. ...+.. .|...+ +|
T Consensus 423 ~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~PVVasyHTny~eYl~~y~--~g~L~~~llk~l~~~v~r~-hc 499 (794)
T PLN02501 423 AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREK--NGALQAFFVKHINNWVTRA-YC 499 (794)
T ss_pred hHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcCCeEEEEeCCcHHHHhHhc--chhHHHHHHHHHHHHHHHh-hC
Confidence 45677888999999999998744 444 2222222223321222211 1111110 011111 122211 28
Q ss_pred CEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCH
Q 043412 126 DFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGW 205 (383)
Q Consensus 126 d~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~ 205 (383)
|.|+++|..+.+ +. . ++....||||++.|.|....... ...+. ......++++||+.+.||+
T Consensus 500 D~VIaPS~atq~-L~-----~-~vI~nVnGVDte~F~P~~r~~~~----r~lgi-------~~~~kgiLfVGRLa~EKGl 561 (794)
T PLN02501 500 HKVLRLSAATQD-LP-----K-SVICNVHGVNPKFLKIGEKVAEE----RELGQ-------QAFSKGAYFLGKMVWAKGY 561 (794)
T ss_pred CEEEcCCHHHHH-hc-----c-cceeecccccccccCCcchhHHH----HhcCC-------ccccCceEEEEcccccCCH
Confidence 999999977774 31 1 22222379999999876542111 11111 2223447899999999999
Q ss_pred HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-------CCccccccccCceEEecCCCCCCChHHH
Q 043412 206 DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-------EKPDDGWAPAADVFVLPSRGEGWGRPLV 278 (383)
Q Consensus 206 ~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~adi~v~ps~~e~~~~~~~ 278 (383)
+.+++|+..+..+.++++|+|+|+| +..+.+++.+.++++ .++...+|+.+|+||+||.+|+||++++
T Consensus 562 d~LLeAla~L~~~~pnvrLvIVGDG-----P~reeLe~la~eLgL~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlL 636 (794)
T PLN02501 562 RELIDLLAKHKNELDGFNLDVFGNG-----EDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATA 636 (794)
T ss_pred HHHHHHHHHHHhhCCCeEEEEEcCC-----ccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCCEEEECCCcccchHHHH
Confidence 9999999999888899999999998 456778777776553 3556679999999999999999999999
Q ss_pred HHHHcCCCEEEcCCCCccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 279 EAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 279 Ea~a~G~PvI~~~~~g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
||||||+|||+++.++... +.+ .+|++.. |+++++++|.+++.|+..+..+..
T Consensus 637 EAMA~GlPVVATd~pG~e~-V~~g~nGll~~--------------------D~EafAeAI~~LLsd~~~rl~~~a----- 690 (794)
T PLN02501 637 EALAMGKFVVCADHPSNEF-FRSFPNCLTYK--------------------TSEDFVAKVKEALANEPQPLTPEQ----- 690 (794)
T ss_pred HHHHcCCCEEEecCCCCce-EeecCCeEecC--------------------CHHHHHHHHHHHHhCchhhhHHHH-----
Confidence 9999999999999988544 544 3665442 999999999999998875433322
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 043412 358 MIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~ 375 (383)
...+||+.+++++.+.-
T Consensus 691 -~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 691 -RYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HhhCCHHHHHHHHHHhh
Confidence 34899999999998764
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-28 Score=221.32 Aligned_cols=192 Identities=23% Similarity=0.256 Sum_probs=152.8
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
++++|.++++|+..++.+.+... .+..+++||+|.+.+.+... ....++++|++.+
T Consensus 151 ~~~~d~ii~~S~~~~~~~~~~~~--~~~~vi~~~~d~~~~~~~~~----------------------~~~~il~~G~~~~ 206 (351)
T cd03804 151 AARVDYFIANSRFVARRIKKYYG--RDATVIYPPVDTDRFTPAEE----------------------KEDYYLSVGRLVP 206 (351)
T ss_pred hcCCCEEEECCHHHHHHHHHHhC--CCcEEECCCCCHhhcCcCCC----------------------CCCEEEEEEcCcc
Confidence 68999999999999999987422 25689999999887754321 1335889999999
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHH----HhhCCCC--CccccccccCceEEecCCCCCCCh
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF----VEDSDLE--KPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~----~~~~~~~--~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
.||++.+++|+.++ + ++|+++|+|+ ..+.+++. +..+|.. +++..+++.||++++||. |++|+
T Consensus 207 ~K~~~~li~a~~~~----~-~~l~ivG~g~-----~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~ 275 (351)
T cd03804 207 YKRIDLAIEAFNKL----G-KRLVVIGDGP-----ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGI 275 (351)
T ss_pred ccChHHHHHHHHHC----C-CcEEEEECCh-----hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCc
Confidence 99999999999876 3 7999999883 33444431 1222332 336789999999999999 99999
Q ss_pred HHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHH-HHHHHHHH
Q 043412 276 PLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVD-EAKAKGKQ 353 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~-~~~~~~~~ 353 (383)
+++|||+||+|||+++.++..|++.++ +|++++++ |+++++++|.++++|++ ..+.
T Consensus 276 ~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~------------------~~~~la~~i~~l~~~~~~~~~~---- 333 (351)
T cd03804 276 VPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQ------------------TVESLAAAVERFEKNEDFDPQA---- 333 (351)
T ss_pred hHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCC------------------CHHHHHHHHHHHHhCcccCHHH----
Confidence 999999999999999999999999885 88888776 99999999999999884 3333
Q ss_pred HHHHHHhcCCHHHHHHHH
Q 043412 354 AREDMIQRFSPETVAGIV 371 (383)
Q Consensus 354 a~~~~~~~~s~~~~~~~~ 371 (383)
+++. .++|+|+++.+++
T Consensus 334 ~~~~-~~~~~~~~~~~~~ 350 (351)
T cd03804 334 IRAH-AERFSESRFREKI 350 (351)
T ss_pred HHHH-HHhcCHHHHHHHh
Confidence 3333 3579999998875
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=218.31 Aligned_cols=176 Identities=17% Similarity=0.154 Sum_probs=141.5
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
++.+|.++++|+..++.+.+ ++.+ +.+|+||. .+.|.+...... +. .++..+++++|++.
T Consensus 163 ~~~ad~ii~~S~~~~~~l~~~~g~~---i~vi~n~~-~~~f~~~~~~~~---------~~------~~~~~~i~~~grl~ 223 (371)
T PLN02275 163 GKMADGHLCVTKAMQHELDQNWGIR---ATVLYDQP-PEFFRPASLEIR---------LR------PNRPALVVSSTSWT 223 (371)
T ss_pred HhhCCEEEECCHHHHHHHHHhcCCC---eEEECCCC-HHHcCcCCchhc---------cc------CCCcEEEEEeCcee
Confidence 68899999999999999987 5663 88999985 455554322100 00 13356788999999
Q ss_pred cccCHHHHHHHHHHHh-----------------ccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------C
Q 043412 201 YRKGWDVLLKAYLEEF-----------------SKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------K 252 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~-----------------~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~ 252 (383)
+.||++.+++|+..+. ++.|+++|+++|+| +..+++++.++++++. +
T Consensus 224 ~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G-----~~~~~l~~~~~~~~l~~v~~~~~~~~~~ 298 (371)
T PLN02275 224 PDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKG-----PQKAMYEEKISRLNLRHVAFRTMWLEAE 298 (371)
T ss_pred ccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCC-----CCHHHHHHHHHHcCCCceEEEcCCCCHH
Confidence 9999999999998774 24589999999998 5578888888877653 4
Q ss_pred ccccccccCceEEecC---CCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCC
Q 043412 253 PDDGWAPAADVFVLPS---RGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 253 ~v~~~~~~adi~v~ps---~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
++..+|+.||++++|+ ..|++|++++||||||+|||+++.+|..|++.++ +|++++
T Consensus 299 ~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~-------------------- 358 (371)
T PLN02275 299 DYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS-------------------- 358 (371)
T ss_pred HHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--------------------
Confidence 5567889999999863 2488999999999999999999999999999886 888876
Q ss_pred CHHHHHHHHHHHh
Q 043412 329 SVDKLRALMRLVV 341 (383)
Q Consensus 329 ~~~~la~~i~~ll 341 (383)
|+++++++|.+++
T Consensus 359 ~~~~la~~i~~l~ 371 (371)
T PLN02275 359 SSSELADQLLELL 371 (371)
T ss_pred CHHHHHHHHHHhC
Confidence 7999999998874
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=218.41 Aligned_cols=245 Identities=17% Similarity=0.203 Sum_probs=159.9
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccc-------cCCCCCCCCcEEE
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG-------LSNMNTSSKEFVF 193 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~i 193 (383)
...||.++++|+.++..+.. ++.++++ |||||+|.+.|.+...... .....+..+. ...+++++++.++
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~-~~~~~k~ki~~f~~~~~~~~~~~~~d~tli 300 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQN-LHAQSKEKINEFVRGHFYGHYDFDLDKTLY 300 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhh-hhHHhhhhhhHHHHHHHhhhcCCCCCCeEE
Confidence 57899999999999999999 7888766 9999999999876542110 0000000000 0123345666666
Q ss_pred EE-eecccc-ccCHHHHHHHHHHHhcc----CCC---eEEEEEeCCCC-------CCCchHHHHHHHHhh----------
Q 043412 194 LS-VFKWEY-RKGWDVLLKAYLEEFSK----ADG---VVLYLLTNPYH-------SGRDFGNKIVNFVED---------- 247 (383)
Q Consensus 194 ~~-~g~~~~-~K~~~~ll~a~~~l~~~----~~~---~~l~i~G~~~~-------~~~~~~~~~~~~~~~---------- 247 (383)
++ +||++. +||+|.+|+|+.++... ..+ +-|+++-.... ...+..+++++-++.
T Consensus 301 ~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~ 380 (590)
T cd03793 301 FFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLF 380 (590)
T ss_pred EEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhh
Confidence 66 899988 99999999999888752 222 33444333211 001111111111111
Q ss_pred ---------------------------------------------------------CCCC----Cc-------------
Q 043412 248 ---------------------------------------------------------SDLE----KP------------- 253 (383)
Q Consensus 248 ---------------------------------------------------------~~~~----~~------------- 253 (383)
.++. ++
T Consensus 381 ~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~ 460 (590)
T cd03793 381 EAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSST 460 (590)
T ss_pred hHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCC
Confidence 1111 11
Q ss_pred -------cccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc----ccccCC--CceeeecccccccccCCC
Q 043412 254 -------DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT----EYLTEE--NGYPLLVGRMSEVTEGPF 320 (383)
Q Consensus 254 -------v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~----e~v~~~--~g~~~~~~~~~~~~~~~~ 320 (383)
...+++.||++|+||++||||++++|||+||+|||+|+.+|.. |.+.++ .|+.+...+ +.-
T Consensus 461 ~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~-~~~----- 534 (590)
T cd03793 461 NPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRR-FKS----- 534 (590)
T ss_pred CCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCC-ccc-----
Confidence 1366799999999999999999999999999999999999884 554432 455554211 000
Q ss_pred CcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 321 KGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAR-EDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 321 ~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~-~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
.+.+.++++++|.++++. +.++++..+++ +...+.|+|+++++.|.+.|..++++
T Consensus 535 -----~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~~ 590 (590)
T cd03793 535 -----PDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALSR 590 (590)
T ss_pred -----hHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhC
Confidence 012789999999998854 45555555543 34578999999999999999988753
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=224.67 Aligned_cols=325 Identities=15% Similarity=0.139 Sum_probs=213.3
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecC-CCc-ccchh-----hcCCChhhhhHHHHHHhhhcCCCccEEEecCCCC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHH-GDL-QSLQF-----WEGLPHHMRNLAVELYNTECRTNETVVICHSEPG 79 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~-~~~-~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~ 79 (383)
+.|-...+..+++.|.+.+....+.+.+... +.. ..... ..-+|. .....+.+++++++||+||++...
T Consensus 59 s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P~---d~~~~~~~~l~~~~Pd~v~~~~~~- 134 (425)
T PRK05749 59 SVGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAQALFGDDVEHRYLPY---DLPGAVRRFLRFWRPKLVIIMETE- 134 (425)
T ss_pred CHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHhcCCCceEEEecC---CcHHHHHHHHHhhCCCEEEEEecc-
Confidence 3467788999999999887543332322211 111 10000 112332 233567778899999999998542
Q ss_pred CCCCccccc---CCCCCCCCCCCccccccee---eeec-CCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEe
Q 043412 80 AWYPPLFDT---LPCPPTPGYGDFMAVIGRT---MFET-DRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKI 152 (383)
Q Consensus 80 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi 152 (383)
.|. ..+.. ...+.+ ... ++. .... ..+.......++.+|.|++.|+..++.+.+.|++++ +.++
T Consensus 135 ~~~-~~l~~~~~~~ip~v------l~~-~~~~~~s~~~~~~~~~~~r~~~~~~d~ii~~S~~~~~~l~~~g~~~~-i~vi 205 (425)
T PRK05749 135 LWP-NLIAELKRRGIPLV------LAN-ARLSERSFKRYQKFKRFYRLLFKNIDLVLAQSEEDAERFLALGAKNE-VTVT 205 (425)
T ss_pred hhH-HHHHHHHHCCCCEE------EEe-ccCChhhHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCCC-cEec
Confidence 342 22211 111111 110 000 0000 011222334468899999999999999999988766 8899
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
+|+ +.+...+......... .+..+ + +++.+++++|+. .|+.+.+++|++++.++.|+++|+|+|+|+
T Consensus 206 ~n~-~~d~~~~~~~~~~~~~--~r~~~-----~--~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~- 272 (425)
T PRK05749 206 GNL-KFDIEVPPELAARAAT--LRRQL-----A--PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHP- 272 (425)
T ss_pred ccc-cccCCCChhhHHHHHH--HHHHh-----c--CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCCh-
Confidence 884 2222221111000000 01111 0 345667777763 578999999999998888999999999872
Q ss_pred CCCchHHHHHHHHhhCCCC----------------------CccccccccCceEEe-cCCCCCCChHHHHHHHcCCCEEE
Q 043412 233 SGRDFGNKIVNFVEDSDLE----------------------KPDDGWAPAADVFVL-PSRGEGWGRPLVEAMSMGLPVIA 289 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~----------------------~~v~~~~~~adi~v~-ps~~e~~~~~~~Ea~a~G~PvI~ 289 (383)
+..+++++.+++.|+. +++..+|+.||++++ +|..|++|++++|||+||+|||+
T Consensus 273 ---~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~ 349 (425)
T PRK05749 273 ---ERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVIS 349 (425)
T ss_pred ---hhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEE
Confidence 2236788888887763 257889999999555 67789999999999999999999
Q ss_pred cCC-CCccccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHH
Q 043412 290 TNW-SGPTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366 (383)
Q Consensus 290 ~~~-~g~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~ 366 (383)
++. ++..++.+. .+|.+++++ |+++++++|.++++|++.+++|+++|++.+.++ ..
T Consensus 350 g~~~~~~~e~~~~~~~~g~~~~~~------------------d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~---~~ 408 (425)
T PRK05749 350 GPHTFNFKEIFERLLQAGAAIQVE------------------DAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN---QG 408 (425)
T ss_pred CCCccCHHHHHHHHHHCCCeEEEC------------------CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC---cc
Confidence 876 556666554 356666655 999999999999999999999999999987665 36
Q ss_pred HHHHHHHHHHHHHhc
Q 043412 367 VAGIVTDHIKDILSS 381 (383)
Q Consensus 367 ~~~~~~~~~~~~~~~ 381 (383)
.++++.+.+++.+.+
T Consensus 409 ~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 409 ALQRTLQLLEPYLPP 423 (425)
T ss_pred HHHHHHHHHHHhccc
Confidence 778888888877654
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=222.67 Aligned_cols=278 Identities=15% Similarity=0.147 Sum_probs=196.2
Q ss_pred ccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cC
Q 043412 69 ETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SG 143 (383)
Q Consensus 69 pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~ 143 (383)
-|+|.+|+......+.+++........++.-.....+..++..-++...+.+.+-.+|.|...+....+.|.+ .+
T Consensus 128 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~ 207 (456)
T TIGR02400 128 GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELG 207 (456)
T ss_pred CCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhC
Confidence 4799999876655555554432211101100001111223333345666777789999999999999887765 12
Q ss_pred -----------CCCCCeEEecCCCcCCCCCCCCCCCCccccC--CccccccCCCCCCCCcEEEEEeeccccccCHHHHHH
Q 043412 144 -----------VDPAKVVKIVQPVHVGFFDPVNCDPIDLASI--GKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLK 210 (383)
Q Consensus 144 -----------~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~ 210 (383)
....++.++|||+|++.|.+........... .+..+ +++++|+++||+++.||++.+++
T Consensus 208 ~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--------~~~~vIl~VgRLd~~KGi~~ll~ 279 (456)
T TIGR02400 208 LETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL--------KGRKLIIGVDRLDYSKGLPERLL 279 (456)
T ss_pred CcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc--------CCCeEEEEccccccccCHHHHHH
Confidence 1345788999999999886643321100000 00011 35789999999999999999999
Q ss_pred HHHHHhccCCC----eEEEEEeCCCCCCCchHHHHHHHHhhC-----------CC-----------CCccccccccCceE
Q 043412 211 AYLEEFSKADG----VVLYLLTNPYHSGRDFGNKIVNFVEDS-----------DL-----------EKPDDGWAPAADVF 264 (383)
Q Consensus 211 a~~~l~~~~~~----~~l~i~G~~~~~~~~~~~~~~~~~~~~-----------~~-----------~~~v~~~~~~adi~ 264 (383)
|++++++++|+ +.|+++|.+..++.+....+++.++++ +. .+++..+|+.||++
T Consensus 280 A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~ 359 (456)
T TIGR02400 280 AFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVG 359 (456)
T ss_pred HHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEE
Confidence 99999888886 568777654323334444444444332 11 25567889999999
Q ss_pred EecCCCCCCChHHHHHHHcCCC----EEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLP----VIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV 340 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~P----vI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l 340 (383)
++||..||||++++||||||+| +|+|+.+|..+.+. +|+++++. |+++++++|.++
T Consensus 360 vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~--~gllVnP~------------------d~~~lA~aI~~a 419 (456)
T TIGR02400 360 LVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN--GALLVNPY------------------DIDGMADAIARA 419 (456)
T ss_pred EECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC--CcEEECCC------------------CHHHHHHHHHHH
Confidence 9999999999999999999999 99999988888774 67777776 999999999999
Q ss_pred hc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 341 VS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 341 l~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
++ ++++++++.+++++++ .+||+..+++++.+-+
T Consensus 420 L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 420 LTMPLEEREERHRAMMDKL-RKNDVQRWREDFLSDL 454 (456)
T ss_pred HcCCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHh
Confidence 98 5677888888888875 5699999999988654
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=224.48 Aligned_cols=277 Identities=14% Similarity=0.103 Sum_probs=189.8
Q ss_pred CccEEEecCCCCCCCCcccccCCC-CCC-CCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh----
Q 043412 68 NETVVICHSEPGAWYPPLFDTLPC-PPT-PGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR---- 141 (383)
Q Consensus 68 ~pDiV~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~---- 141 (383)
..|+|++|+......+.++..... ..+ ..+|.. .-+...|..-.....+...+-.+|.|...+....+.+.+
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hip--fP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~ 208 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIP--FPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSR 208 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCC--CCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHH
Confidence 569999998765544444433211 111 001100 011122332334455666677799999999776655443
Q ss_pred -cC------------CCCCCeEEecCCCcCCCCCCCCCCCCccc-cCCccccccCCCCCCCCcEEEEEeeccccccCHHH
Q 043412 142 -SG------------VDPAKVVKIVQPVHVGFFDPVNCDPIDLA-SIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDV 207 (383)
Q Consensus 142 -~~------------~~~~~i~vi~ngid~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ 207 (383)
.+ ....++.++|||+|.+.|.+......... .+.... ..+++++|+++||+++.||++.
T Consensus 209 ~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~-------~~~~~~~il~vgRl~~~Kgi~~ 281 (460)
T cd03788 209 LLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRE-------RLGGRKLIVGVDRLDYSKGIPE 281 (460)
T ss_pred HcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHH-------hcCCCEEEEEecCccccCCHHH
Confidence 11 12247899999999988875433211100 000011 1356889999999999999999
Q ss_pred HHHHHHHHhccCCC----eEEEEEeCCCCCCCc----hHHHHHHHHhhC----C--------------CCCccccccccC
Q 043412 208 LLKAYLEEFSKADG----VVLYLLTNPYHSGRD----FGNKIVNFVEDS----D--------------LEKPDDGWAPAA 261 (383)
Q Consensus 208 ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~----~~~~~~~~~~~~----~--------------~~~~v~~~~~~a 261 (383)
+++|+.++++++|+ ++|+++|.+...+.+ +.+++++++... + -.+++..+|+.|
T Consensus 282 ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~a 361 (460)
T cd03788 282 RLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAA 361 (460)
T ss_pred HHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhc
Confidence 99999999888886 678888765322222 334444443332 1 114567889999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCC----EEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLP----VIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~P----vI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
|++++||..||||++++|||+||+| ||+|+.+|..+. ..+|+++++. |+++++++|
T Consensus 362 Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--~~~g~lv~p~------------------d~~~la~ai 421 (460)
T cd03788 362 DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--LSGALLVNPY------------------DIDEVADAI 421 (460)
T ss_pred cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh--cCCCEEECCC------------------CHHHHHHHH
Confidence 9999999999999999999999999 999998888776 3467777766 999999999
Q ss_pred HHHhcCH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 338 RLVVSNV-DEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 338 ~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
.++++++ +.+..+.+++++.+ ++||++.+++++.+-
T Consensus 422 ~~~l~~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~~ 458 (460)
T cd03788 422 HRALTMPLEERRERHRKLREYV-RTHDVQAWANSFLDD 458 (460)
T ss_pred HHHHcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHh
Confidence 9999855 67788888888875 789999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-25 Score=203.53 Aligned_cols=246 Identities=19% Similarity=0.162 Sum_probs=189.0
Q ss_pred HHHhcCCCCEEEEeChHHHHHHHh--cC--------CCCCCeEEecCCCcCCCCCCCCCCCCcc---------ccCCccc
Q 043412 118 HVKRCNRMDFVWVPTDFHVSTFIR--SG--------VDPAKVVKIVQPVHVGFFDPVNCDPIDL---------ASIGKPV 178 (383)
Q Consensus 118 ~~~~~~~ad~vi~~s~~~~~~~~~--~~--------~~~~~i~vi~ngid~~~~~~~~~~~~~~---------~~~~~~~ 178 (383)
.+..+..||.|.++|+..++.+.. +| ....++.-|-||+|.+...|........ ....+..
T Consensus 202 lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~ 281 (487)
T COG0297 202 LKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVA 281 (487)
T ss_pred hhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHH
Confidence 334478899999999999988762 21 1236889999999999888765532210 1011111
Q ss_pred cccCCCCCC--CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----
Q 043412 179 LGLSNMNTS--SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE----- 251 (383)
Q Consensus 179 l~~~~~~~~--~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~----- 251 (383)
++ ..++++ .+.+++.++||+..+||++.+++++..+.++. +++++.|.| +..+...+..+.+.+...
T Consensus 282 L~-~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~g---d~~le~~~~~la~~~~~~~~~~i 355 (487)
T COG0297 282 LQ-ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTG---DPELEEALRALASRHPGRVLVVI 355 (487)
T ss_pred HH-HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecC---cHHHHHHHHHHHHhcCceEEEEe
Confidence 11 223333 57799999999999999999999999998875 999999998 457777788777766542
Q ss_pred ---C-ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccC
Q 043412 252 ---K-PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAE 327 (383)
Q Consensus 252 ---~-~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~ 327 (383)
+ -...+++.+|++++||++|++|++-++||..|++.|+..+||.+|.|.+.+-.. ..+.++|+++.+
T Consensus 356 ~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~---------~~~~gtGf~f~~ 426 (487)
T COG0297 356 GYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWL---------IQGVGTGFLFLQ 426 (487)
T ss_pred eecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchh---------ccCceeEEEEec
Confidence 1 125777999999999999999999999999999999999999999998642211 234477888888
Q ss_pred CCHHHHHHHHHHHhc---CHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 328 PSVDKLRALMRLVVS---NVDE-AKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 328 ~~~~~la~~i~~ll~---~~~~-~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
.++++++.+|++.+. ++.. .+.+..++.. ..|+|+..+++|.++|+.+++.
T Consensus 427 ~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 427 TNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHhcc
Confidence 899999999998776 4444 6777776643 6899999999999999998764
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-25 Score=201.96 Aligned_cols=215 Identities=12% Similarity=0.094 Sum_probs=157.9
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
.+.+|.++++|+..++.+.+.|++++++.+++++++.++..+... ....+.+++ ++++.++++++|+...
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~~g~~~~ki~v~g~~v~~~f~~~~~~---~~~~r~~~g-------l~~~~~~il~~Gg~~g 217 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALKRGLEPSQIRVYGLPIRPSFARAVRP---KDELRRELG-------MDEDLPAVLLMGGGEG 217 (382)
T ss_pred cCCCCEEEECCHHHHHHHHHcCCCHHHEEEECcccCHhhccCCCC---HHHHHHHcC-------CCCCCcEEEEECCCcc
Confidence 378999999999999999999999999999999998754433211 111122333 4678899999999888
Q ss_pred ccCHHHHHHHHHHHhc----cCCCeE-EEEEeCCCCCCCchHHHHHHH-----HhhCCCCCccccccccCceEEecCCCC
Q 043412 202 RKGWDVLLKAYLEEFS----KADGVV-LYLLTNPYHSGRDFGNKIVNF-----VEDSDLEKPDDGWAPAADVFVLPSRGE 271 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~----~~~~~~-l~i~G~~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~adi~v~ps~~e 271 (383)
.|++..+++++..+.. ..++.+ ++++|.+ ....+.+++. +.-+|..+++..+|+.||++|.++
T Consensus 218 ~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~----~~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv~V~~~--- 290 (382)
T PLN02605 218 MGPLEETARALGDSLYDKNLGKPIGQVVVICGRN----KKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDCIITKA--- 290 (382)
T ss_pred cccHHHHHHHHHHhhccccccCCCceEEEEECCC----HHHHHHHHhhcccCCeEEEeccccHHHHHHhCCEEEECC---
Confidence 9999999999876541 235665 5666654 1334445443 223466688999999999999865
Q ss_pred CCChHHHHHHHcCCCEEEcCC------CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcC-H
Q 043412 272 GWGRPLVEAMSMGLPVIATNW------SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSN-V 344 (383)
Q Consensus 272 ~~~~~~~Ea~a~G~PvI~~~~------~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~-~ 344 (383)
.|++++|||+||+|+|+++. ++...+++.+.|+.+ .|+++++++|.++++| +
T Consensus 291 -g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~--------------------~~~~~la~~i~~ll~~~~ 349 (382)
T PLN02605 291 -GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS--------------------ESPKEIARIVAEWFGDKS 349 (382)
T ss_pred -CcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec--------------------CCHHHHHHHHHHHHcCCH
Confidence 47899999999999999984 333334434455433 2999999999999998 9
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 345 DEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 345 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
+.+++|++++++. ....+.+.+++.+.+..
T Consensus 350 ~~~~~m~~~~~~~-~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 350 DELEAMSENALKL-ARPEAVFDIVHDLHELV 379 (382)
T ss_pred HHHHHHHHHHHHh-cCCchHHHHHHHHHHHh
Confidence 9999999999886 45667777776665543
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=200.24 Aligned_cols=260 Identities=13% Similarity=0.009 Sum_probs=174.6
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHH-hcCCCCEEEEeC
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK-RCNRMDFVWVPT 132 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~vi~~s 132 (383)
.....++.+++++.+||+||+|+....+...........+. +.+... . +.....+ .++.+|.+++.+
T Consensus 77 ~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~-----v~~~~~--~-----~~~~~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 77 LKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPL-----VIHEQN--A-----VPGLANKLLARFAKKVATAF 144 (357)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCE-----EEEcCC--C-----CccHHHHHHHHHhchheECc
Confidence 34455677788899999999997554443222222111111 111111 0 1111122 356789999988
Q ss_pred hHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHH-HH
Q 043412 133 DFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLL-KA 211 (383)
Q Consensus 133 ~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll-~a 211 (383)
+... .+ .+..++.++|||++.+.+.+.... .+.. .+++.++++++|+....|+...++ +|
T Consensus 145 ~~~~---~~--~~~~~i~vi~n~v~~~~~~~~~~~-------~~~~-------~~~~~~~i~~~gg~~~~~~~~~~l~~a 205 (357)
T PRK00726 145 PGAF---PE--FFKPKAVVTGNPVREEILALAAPP-------ARLA-------GREGKPTLLVVGGSQGARVLNEAVPEA 205 (357)
T ss_pred hhhh---hc--cCCCCEEEECCCCChHhhcccchh-------hhcc-------CCCCCeEEEEECCcHhHHHHHHHHHHH
Confidence 7442 22 566799999999998765432211 1111 235677888888877778765555 88
Q ss_pred HHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC-------CCCccccccccCceEEecCCCCCCChHHHHHHHcC
Q 043412 212 YLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD-------LEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMG 284 (383)
Q Consensus 212 ~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G 284 (383)
+.++... + ..++++|++ +. +.+.+..+ ++ ..+++..+++.||+++.++ .+++++|||++|
T Consensus 206 ~~~~~~~-~-~~~~~~G~g-----~~-~~~~~~~~-~~~~v~~~g~~~~~~~~~~~~d~~i~~~----g~~~~~Ea~~~g 272 (357)
T PRK00726 206 LALLPEA-L-QVIHQTGKG-----DL-EEVRAAYA-AGINAEVVPFIDDMAAAYAAADLVICRA----GASTVAELAAAG 272 (357)
T ss_pred HHHhhhC-c-EEEEEcCCC-----cH-HHHHHHhh-cCCcEEEeehHhhHHHHHHhCCEEEECC----CHHHHHHHHHhC
Confidence 8887544 3 567788887 22 33333333 33 3367889999999999866 268999999999
Q ss_pred CCEEEcCCCCcc--------ccc-cCCCceeeecccccccccCCCCcccccCCC--HHHHHHHHHHHhcCHHHHHHHHHH
Q 043412 285 LPVIATNWSGPT--------EYL-TEENGYPLLVGRMSEVTEGPFKGHFWAEPS--VDKLRALMRLVVSNVDEAKAKGKQ 353 (383)
Q Consensus 285 ~PvI~~~~~g~~--------e~v-~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~--~~~la~~i~~ll~~~~~~~~~~~~ 353 (383)
+|+|+++.++.. +.+ +.++|++++++ | +++++++|.++++|++.+++|+++
T Consensus 273 ~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~------------------~~~~~~l~~~i~~ll~~~~~~~~~~~~ 334 (357)
T PRK00726 273 LPAILVPLPHAADDHQTANARALVDAGAALLIPQS------------------DLTPEKLAEKLLELLSDPERLEAMAEA 334 (357)
T ss_pred CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc------------------cCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 999999864322 333 34677777655 5 999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHH
Q 043412 354 AREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 354 a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+++. .+.++.+.+++.+.++.+
T Consensus 335 ~~~~-~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 335 ARAL-GKPDAAERLADLIEELAR 356 (357)
T ss_pred HHhc-CCcCHHHHHHHHHHHHhh
Confidence 9986 578999999988887764
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=213.43 Aligned_cols=285 Identities=13% Similarity=0.108 Sum_probs=196.7
Q ss_pred cEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cCC
Q 043412 70 TVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SGV 144 (383)
Q Consensus 70 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~~ 144 (383)
|+|-+|..+....+.+++........++.-....-...++..-++...+.+.+-.||.|-+.+....+.|.+ .+.
T Consensus 149 d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~ 228 (797)
T PLN03063 149 DVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGV 228 (797)
T ss_pred CEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCc
Confidence 799999866655554444332111101100001111122333345566777789999999999999987765 222
Q ss_pred -----------CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHH
Q 043412 145 -----------DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYL 213 (383)
Q Consensus 145 -----------~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~ 213 (383)
...++.++|||||++.|.+...............- ..+++.+|+++||+++.||++.+++|+.
T Consensus 229 ~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~------~~~~~~lIl~VgRLd~~KGi~~lL~Afe 302 (797)
T PLN03063 229 EGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKR------FFAGRKVILGVDRLDMIKGIPQKYLAFE 302 (797)
T ss_pred cccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHH------hcCCCeEEEEecccccccCHHHHHHHHH
Confidence 12478899999999887654321110000000000 0135788999999999999999999999
Q ss_pred HHhccCCCeE----EEEEeCCCCCCCchHHHHHHHHhhCC--CC--------------------CccccccccCceEEec
Q 043412 214 EEFSKADGVV----LYLLTNPYHSGRDFGNKIVNFVEDSD--LE--------------------KPDDGWAPAADVFVLP 267 (383)
Q Consensus 214 ~l~~~~~~~~----l~i~G~~~~~~~~~~~~~~~~~~~~~--~~--------------------~~v~~~~~~adi~v~p 267 (383)
++++++|+++ |+.++.+...+.+..+.+++.++++. +. +++..+|+.||++++|
T Consensus 303 ~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvt 382 (797)
T PLN03063 303 KFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVT 382 (797)
T ss_pred HHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeC
Confidence 9998888753 45444332223344455555554432 11 3456899999999999
Q ss_pred CCCCCCChHHHHHHHcCCC----EEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-
Q 043412 268 SRGEGWGRPLVEAMSMGLP----VIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS- 342 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~P----vI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~- 342 (383)
|..||+|++++||||||+| +|+|..+|..+.+ ..+|++++|. |+++++++|.++++
T Consensus 383 SlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l-~~~allVnP~------------------D~~~lA~AI~~aL~m 443 (797)
T PLN03063 383 SLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL-GAGALLVNPW------------------NITEVSSAIKEALNM 443 (797)
T ss_pred ccccccCcchhhHheeecCCCCCEEeeCCcCchhhh-cCCeEEECCC------------------CHHHHHHHHHHHHhC
Confidence 9999999999999999999 9999999988876 2356777665 99999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 343 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++++++.+.+..+++ ..+++|..+++.+.+.++++..
T Consensus 444 ~~~er~~r~~~~~~~-v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 444 SDEERETRHRHNFQY-VKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred CHHHHHHHHHHHHHh-hhhCCHHHHHHHHHHHHHHHhh
Confidence 778888888888886 5789999999999998887753
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-24 Score=173.77 Aligned_cols=149 Identities=28% Similarity=0.478 Sum_probs=130.6
Q ss_pred CCCCcEEEEEeeccccccCHHHHHHHHHHHhcc-CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC-----------c
Q 043412 186 TSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSK-ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-----------P 253 (383)
Q Consensus 186 ~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~-~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 253 (383)
.++++++|+++|++.+.||++.+++++..+.++ .++++++|+|.+ .....+...++..++.+ +
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 85 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDG-----EYKKELKNLIEKLNLKENIIFLGYVPDDE 85 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHC-----CHHHHHHHHHHHTTCGTTEEEEESHSHHH
T ss_pred CCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccc-----ccccccccccccccccccccccccccccc
Confidence 357899999999999999999999999999875 789999999965 66788888888887752 4
Q ss_pred cccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHH
Q 043412 254 DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 254 v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
+..+++.||++++||..|++|++++|||++|+|||+++.++..|++.++ +|+++++. |+++
T Consensus 86 l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~------------------~~~~ 147 (172)
T PF00534_consen 86 LDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPN------------------DIEE 147 (172)
T ss_dssp HHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTT------------------SHHH
T ss_pred cccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCC------------------CHHH
Confidence 5688899999999999999999999999999999999999999999886 67877766 9999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 333 LRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
++++|.+++++++.++.|+++++++
T Consensus 148 l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 148 LADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-23 Score=191.17 Aligned_cols=265 Identities=13% Similarity=0.112 Sum_probs=176.3
Q ss_pred HHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHH
Q 043412 58 VELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVS 137 (383)
Q Consensus 58 ~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~ 137 (383)
.++.+++++++||+||++++.... + .+.......+ +.+...... .....| .++++|.++++|+..++
T Consensus 94 ~~l~~~l~~~~pD~Vi~~~~~~~~-~-~~~~~~~~~i---p~~~~~td~------~~~~~~--~~~~ad~i~~~s~~~~~ 160 (380)
T PRK13609 94 KRLKLLLQAEKPDIVINTFPIIAV-P-ELKKQTGISI---PTYNVLTDF------CLHKIW--VHREVDRYFVATDHVKK 160 (380)
T ss_pred HHHHHHHHHhCcCEEEEcChHHHH-H-HHHHhcCCCC---CeEEEeCCC------CCCccc--ccCCCCEEEECCHHHHH
Confidence 567888999999999998653321 1 1111111111 111100000 001111 24689999999999999
Q ss_pred HHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCC-cEEEEEeeccccccCHHHHHHHHHHHh
Q 043412 138 TFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSK-EFVFLSVFKWEYRKGWDVLLKAYLEEF 216 (383)
Q Consensus 138 ~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~i~~~g~~~~~K~~~~ll~a~~~l~ 216 (383)
.+.+.|++++++.+++++++.....+.... ..+.+++ ++++ .+++++.|++...|+++.+++++.+
T Consensus 161 ~l~~~gi~~~ki~v~G~p~~~~f~~~~~~~----~~~~~~~-------l~~~~~~il~~~G~~~~~k~~~~li~~l~~-- 227 (380)
T PRK13609 161 VLVDIGVPPEQVVETGIPIRSSFELKINPD----IIYNKYQ-------LCPNKKILLIMAGAHGVLGNVKELCQSLMS-- 227 (380)
T ss_pred HHHHcCCChhHEEEECcccChHHcCcCCHH----HHHHHcC-------CCCCCcEEEEEcCCCCCCcCHHHHHHHHhh--
Confidence 999999988899998887754322111110 1112223 2343 4566777888888999998888753
Q ss_pred ccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-------CCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEE
Q 043412 217 SKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-------DLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIA 289 (383)
Q Consensus 217 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~ 289 (383)
.++++++++|++ +....+.+++.++.. |..+++..+|+.||+++. ++.|++++|||+||+|+|+
T Consensus 228 --~~~~~~viv~G~---~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~PvI~ 298 (380)
T PRK13609 228 --VPDLQVVVVCGK---NEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMIT----KPGGITLSEAAALGVPVIL 298 (380)
T ss_pred --CCCcEEEEEeCC---CHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEe----CCCchHHHHHHHhCCCEEE
Confidence 378999887643 123456666665543 334677889999999884 4568999999999999999
Q ss_pred cC-CCCcc----ccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCH
Q 043412 290 TN-WSGPT----EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSP 364 (383)
Q Consensus 290 ~~-~~g~~----e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~ 364 (383)
++ .+|.. +++. ++|..+... |+++++++|.++++|++.+++|++++++. ...+++
T Consensus 299 ~~~~~g~~~~n~~~~~-~~G~~~~~~------------------~~~~l~~~i~~ll~~~~~~~~m~~~~~~~-~~~~s~ 358 (380)
T PRK13609 299 YKPVPGQEKENAMYFE-RKGAAVVIR------------------DDEEVFAKTEALLQDDMKLLQMKEAMKSL-YLPEPA 358 (380)
T ss_pred CCCCCCcchHHHHHHH-hCCcEEEEC------------------CHHHHHHHHHHHHCCHHHHHHHHHHHHHh-CCCchH
Confidence 86 44421 1222 233333333 99999999999999999999999998874 567899
Q ss_pred HHHHHHHHHHHHH
Q 043412 365 ETVAGIVTDHIKD 377 (383)
Q Consensus 365 ~~~~~~~~~~~~~ 377 (383)
+.+++.+.+.+..
T Consensus 359 ~~i~~~i~~~~~~ 371 (380)
T PRK13609 359 DHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHHhhhh
Confidence 9999999888764
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-23 Score=185.90 Aligned_cols=232 Identities=17% Similarity=0.184 Sum_probs=181.2
Q ss_pred cCCCCEEEEeChHHHHHHHh--cCCCCCCeEEecCCCcCCCCCCCCCC---CCccccCCccccccCCCCCCCCcEEEEEe
Q 043412 122 CNRMDFVWVPTDFHVSTFIR--SGVDPAKVVKIVQPVHVGFFDPVNCD---PIDLASIGKPVLGLSNMNTSSKEFVFLSV 196 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~--~~~~~~~i~vi~ngid~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~i~~~ 196 (383)
...++.+++.|...+..+.. ......++.+.+.++|.+.+.+.... ....+.+...+ .......+..+
T Consensus 207 ~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~-------v~~~d~~~~si 279 (495)
T KOG0853|consen 207 TGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQYESHLELRLPVRLYRG-------VSGIDRFFPSI 279 (495)
T ss_pred hhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchhccccccccchhcccccceeee-------ecccceEeeee
Confidence 46789999999999988876 23444568899999998776642211 11111122222 24568889999
Q ss_pred eccccccCHHHHHHHHHHHhccC-----CCeEEEEEeCC-----CCCCCchHHHHHHHHhhCCCCCcc------------
Q 043412 197 FKWEYRKGWDVLLKAYLEEFSKA-----DGVVLYLLTNP-----YHSGRDFGNKIVNFVEDSDLEKPD------------ 254 (383)
Q Consensus 197 g~~~~~K~~~~ll~a~~~l~~~~-----~~~~l~i~G~~-----~~~~~~~~~~~~~~~~~~~~~~~v------------ 254 (383)
.++.+.|+++.+++++.++.... ++.+++++|+. ..++..+..++.++++++++..+.
T Consensus 280 N~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~ 359 (495)
T KOG0853|consen 280 NRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK 359 (495)
T ss_pred eecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH
Confidence 99999999999999999988776 56888888832 124456778889999999885332
Q ss_pred ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHH--
Q 043412 255 DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVD-- 331 (383)
Q Consensus 255 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-- 331 (383)
..+++.+.+++.....|.||++++|||+||+|||+++.||..|++.++ +|+++++ +.+
T Consensus 360 yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-------------------~~e~~ 420 (495)
T KOG0853|consen 360 YRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-------------------GQEAV 420 (495)
T ss_pred HHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-------------------chHHH
Confidence 233456665555444599999999999999999999999999999997 9998887 344
Q ss_pred -HHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 332 -KLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 332 -~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
.+++++.++..||+.+.+|++++++++.+.|+|..+.+++.++..+.+
T Consensus 421 ~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 421 AELADALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 699999999999999999999999999999999999999998887654
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-23 Score=188.28 Aligned_cols=302 Identities=15% Similarity=0.063 Sum_probs=186.3
Q ss_pred CCCCCChhHHHH---HHHHHHHhcccCCCceeeeecCCC---cccc--hhhcCCCh----------------hhhhHHHH
Q 043412 4 FLSGGGYSSESW---SYILALNEHVKNPRFKLAIEHHGD---LQSL--QFWEGLPH----------------HMRNLAVE 59 (383)
Q Consensus 4 ~~~~~G~~~~~~---~l~~~l~~~g~~~~~~~~~~~~~~---~~~~--~~~~~~~~----------------~~~~~~~~ 59 (383)
+++.||.+.+.. +++++|.++|+...+. ....+. .... -.+..++. .......+
T Consensus 4 ~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 81 (348)
T TIGR01133 4 VLAAGGTGGHIFPALAVAEELIKRGVEVLWL--GTKRGLEKRLVPKAGIEFYFIPVGGLRRKGSFRLIKTPLKLLKAVFQ 81 (348)
T ss_pred EEEeCccHHHHhHHHHHHHHHHhCCCEEEEE--eCCCcchhcccccCCCceEEEeccCcCCCChHHHHHHHHHHHHHHHH
Confidence 467788888874 8999999999765432 221110 0000 00111110 11234456
Q ss_pred HHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHH-HHhcCCCCEEEEeChHHHHH
Q 043412 60 LYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEH-VKRCNRMDFVWVPTDFHVST 138 (383)
Q Consensus 60 l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ad~vi~~s~~~~~~ 138 (383)
+.+++++++||+||+|+....+...........+. +.+... ...... ....+.+|.++++|+..++.
T Consensus 82 l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~-----v~~~~~-------~~~~~~~~~~~~~~d~ii~~~~~~~~~ 149 (348)
T TIGR01133 82 ARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPL-----FHHEQN-------AVPGLTNKLLSRFAKKVLISFPGAKDH 149 (348)
T ss_pred HHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCE-----EEECCC-------CCccHHHHHHHHHhCeeEECchhHhhc
Confidence 77888999999999996544332221111111111 110000 011111 22346799999999988765
Q ss_pred HHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHH-HHHHHHHHhc
Q 043412 139 FIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDV-LLKAYLEEFS 217 (383)
Q Consensus 139 ~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~ 217 (383)
+ +..+++||++...+.+... ..+++ ++++.++++++|+....|+... +++++.++..
T Consensus 150 ~--------~~~~i~n~v~~~~~~~~~~-------~~~~~-------~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~ 207 (348)
T TIGR01133 150 F--------EAVLVGNPVRQEIRSLPVP-------RERFG-------LREGKPTILVLGGSQGAKILNELVPKALAKLAE 207 (348)
T ss_pred C--------CceEEcCCcCHHHhcccch-------hhhcC-------CCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh
Confidence 5 3379999998765543211 11112 3467788999988777788654 5578877754
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEc
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
. ++++++++++ ...+.+++.++.+++. .++..+|+.||+++.++ | +++++|||++|+|+|++
T Consensus 208 ~--~~~~~~~~g~-----~~~~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~ 276 (348)
T TIGR01133 208 K--GIQIVHQTGK-----NDLEKVKNVYQELGIEAIVTFIDENMAAAYAAADLVISRA---G-ASTVAELAAAGVPAILI 276 (348)
T ss_pred c--CcEEEEECCc-----chHHHHHHHHhhCCceEEecCcccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCCCEEEe
Confidence 3 4555444433 1235666666665542 26788999999999865 2 68999999999999999
Q ss_pred CCCCc-------cccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Q 043412 291 NWSGP-------TEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRF 362 (383)
Q Consensus 291 ~~~g~-------~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~ 362 (383)
+.++. .+++.+ ++|+++++.+ .++++++++|.++++|++.+++|++++++++ +..
T Consensus 277 ~~~~~~~~~~~~~~~i~~~~~G~~~~~~~----------------~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~ 339 (348)
T TIGR01133 277 PYPYAADDQYYNAKFLEDLGAGLVIRQKE----------------LLPEKLLEALLKLLLDPANLEAMAEAARKLA-KPD 339 (348)
T ss_pred eCCCCccchhhHHHHHHHCCCEEEEeccc----------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHhcC-Ccc
Confidence 87542 234544 4666665440 0399999999999999999999999998753 445
Q ss_pred CHHHHHH
Q 043412 363 SPETVAG 369 (383)
Q Consensus 363 s~~~~~~ 369 (383)
..+++++
T Consensus 340 ~~~~i~~ 346 (348)
T TIGR01133 340 AAKRIAE 346 (348)
T ss_pred HHHHHHh
Confidence 5555443
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=185.70 Aligned_cols=253 Identities=14% Similarity=0.027 Sum_probs=163.6
Q ss_pred HHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHh-cCCCCEEEEeChHH
Q 043412 57 AVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKR-CNRMDFVWVPTDFH 135 (383)
Q Consensus 57 ~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~vi~~s~~~ 135 (383)
...+.+++++++||+||+|+....+...........+. +.+.. ..+...+.+. ++.+|.++++|+..
T Consensus 78 ~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~-----v~~~~-------~~~~~~~~~~~~~~~~~vi~~s~~~ 145 (350)
T cd03785 78 VLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPL-----VIHEQ-------NAVPGLANRLLARFADRVALSFPET 145 (350)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCE-----EEEcC-------CCCccHHHHHHHHhhCEEEEcchhh
Confidence 34567788999999999997654332222111111111 11111 1111122222 45699999999988
Q ss_pred HHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHH-HHHHHHH
Q 043412 136 VSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDV-LLKAYLE 214 (383)
Q Consensus 136 ~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~ 214 (383)
++. .++.++.+++||+|.+.+.+... ..+.. .+++.+++++.|+....|+... +++++..
T Consensus 146 ~~~-----~~~~~~~~i~n~v~~~~~~~~~~-------~~~~~-------~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~ 206 (350)
T cd03785 146 AKY-----FPKDKAVVTGNPVREEILALDRE-------RARLG-------LRPGKPTLLVFGGSQGARAINEAVPEALAE 206 (350)
T ss_pred hhc-----CCCCcEEEECCCCchHHhhhhhh-------HHhcC-------CCCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 776 45679999999999876654211 11111 2456777777776666677654 5588877
Q ss_pred HhccCCCeEE-EEEeCCCCCCCchHHHHHHHHhhC-------CCCCccccccccCceEEecCCCCCCChHHHHHHHcCCC
Q 043412 215 EFSKADGVVL-YLLTNPYHSGRDFGNKIVNFVEDS-------DLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLP 286 (383)
Q Consensus 215 l~~~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~P 286 (383)
+.+ +++++ +++|.+ ..+.+++.++++ +..+++..+|+.||+++.++- +++++|||++|+|
T Consensus 207 l~~--~~~~~~~i~G~g------~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~v~~sg----~~t~~Eam~~G~P 274 (350)
T cd03785 207 LLR--KRLQVIHQTGKG------DLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAG----ASTVAELAALGLP 274 (350)
T ss_pred hhc--cCeEEEEEcCCc------cHHHHHHHHhccCCCeEEeehhhhHHHHHHhcCEEEECCC----HhHHHHHHHhCCC
Confidence 752 45664 456654 234455555432 223677899999999998662 6899999999999
Q ss_pred EEEcCCCCc--------ccccc-CCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 287 VIATNWSGP--------TEYLT-EENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 287 vI~~~~~g~--------~e~v~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
+|+++.++. .+.+. .++|++++.+ ..|+++++++|.++++|++.+++|+++++++
T Consensus 275 vv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~----------------~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 275 AILIPLPYAADDHQTANARALVKAGAAVLIPQE----------------ELTPERLAAALLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred EEEeecCCCCCCcHHHhHHHHHhCCCEEEEecC----------------CCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 999876541 23333 3566666542 0179999999999999999999999999886
Q ss_pred HHhcCCHHHHHH
Q 043412 358 MIQRFSPETVAG 369 (383)
Q Consensus 358 ~~~~~s~~~~~~ 369 (383)
+ +.+.-+++++
T Consensus 339 ~-~~~~~~~i~~ 349 (350)
T cd03785 339 A-RPDAAERIAD 349 (350)
T ss_pred C-CCCHHHHHHh
Confidence 3 5666666553
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=188.26 Aligned_cols=274 Identities=14% Similarity=0.161 Sum_probs=178.2
Q ss_pred HHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHH
Q 043412 58 VELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVS 137 (383)
Q Consensus 58 ~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~ 137 (383)
.++.+++++++||+||++.+.+.+ ..+.......+ +........ .....| ..+.+|.+++.|+..++
T Consensus 94 ~~l~~~l~~~kPDvVi~~~p~~~~--~~l~~~~~~~i---P~~~v~td~------~~~~~w--~~~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 94 NKLINLLIKEKPDLILLTFPTPVM--SVLTEQFNINI---PVATVMTDY------RLHKNW--ITPYSTRYYVATKETKQ 160 (391)
T ss_pred HHHHHHHHHhCcCEEEECCcHHHH--HHHHHhcCCCC---CEEEEeCCC------Cccccc--ccCCCCEEEECCHHHHH
Confidence 567788899999999997543311 11111111111 111000000 011111 13679999999999999
Q ss_pred HHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCC-CcEEEEEeeccccccCHHHHHHHHHHHh
Q 043412 138 TFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSS-KEFVFLSVFKWEYRKGWDVLLKAYLEEF 216 (383)
Q Consensus 138 ~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~~~g~~~~~K~~~~ll~a~~~l~ 216 (383)
.+.+.|++++++.+++++++..+..+... ...+.++++ ++ ...++++.|++...|+++.+++++.
T Consensus 161 ~l~~~gi~~~ki~v~GiPv~~~f~~~~~~----~~~~~~~~l-------~~~~~~ilv~~G~lg~~k~~~~li~~~~--- 226 (391)
T PRK13608 161 DFIDVGIDPSTVKVTGIPIDNKFETPIDQ----KQWLIDNNL-------DPDKQTILMSAGAFGVSKGFDTMITDIL--- 226 (391)
T ss_pred HHHHcCCCHHHEEEECeecChHhcccccH----HHHHHHcCC-------CCCCCEEEEECCCcccchhHHHHHHHHH---
Confidence 99999998899999998887543222111 011112222 33 4456678899988899999999863
Q ss_pred ccCCCeEEEEEeCCCCCCCchHHHHHHHHh------hCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEc
Q 043412 217 SKADGVVLYLLTNPYHSGRDFGNKIVNFVE------DSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 217 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
+..+++++++++++. ....+.+.+... -.|..+++..+|+.||+++.. +.|+++.|||++|+|+|++
T Consensus 227 ~~~~~~~~vvv~G~~---~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~k----~gg~tl~EA~a~G~PvI~~ 299 (391)
T PRK13608 227 AKSANAQVVMICGKS---KELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITK----PGGITISEGLARCIPMIFL 299 (391)
T ss_pred hcCCCceEEEEcCCC---HHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEEeC----CchHHHHHHHHhCCCEEEC
Confidence 234688887765431 123344443322 235567888999999999963 4689999999999999999
Q ss_pred CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 291 NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 291 ~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
+..+..|. .|+.++... +.|. ...|+++++++|.++++|++.+++|++++++. .+.++++.+++.
T Consensus 300 ~~~pgqe~---~N~~~~~~~---------G~g~--~~~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~-~~~~s~~~i~~~ 364 (391)
T PRK13608 300 NPAPGQEL---ENALYFEEK---------GFGK--IADTPEEAIKIVASLTNGNEQLTNMISTMEQD-KIKYATQTICRD 364 (391)
T ss_pred CCCCCcch---hHHHHHHhC---------CcEE--EeCCHHHHHHHHHHHhcCHHHHHHHHHHHHHh-cCCCCHHHHHHH
Confidence 64221111 233222211 1122 22399999999999999999999999999985 677999999999
Q ss_pred HHHHHHHHHh
Q 043412 371 VTDHIKDILS 380 (383)
Q Consensus 371 ~~~~~~~~~~ 380 (383)
+.+++.++.+
T Consensus 365 l~~l~~~~~~ 374 (391)
T PRK13608 365 LLDLIGHSSQ 374 (391)
T ss_pred HHHHhhhhhh
Confidence 9999877543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-23 Score=207.48 Aligned_cols=284 Identities=15% Similarity=0.132 Sum_probs=189.4
Q ss_pred ccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cC
Q 043412 69 ETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SG 143 (383)
Q Consensus 69 pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~ 143 (383)
-|+|.+|+.+....+..++........++.-....-...++..-++...+...+-.+|.|-..+....+.|.+ .+
T Consensus 134 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~ 213 (726)
T PRK14501 134 GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLG 213 (726)
T ss_pred CCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcC
Confidence 3899999876655555544332111101100000011112222335566667788999999999987776554 12
Q ss_pred C-----------CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHH
Q 043412 144 V-----------DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAY 212 (383)
Q Consensus 144 ~-----------~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~ 212 (383)
. ...++.++|+|||++.|.+.............+.- ..+++++|+++||+++.||+..+++|+
T Consensus 214 ~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~------~~~~~~~il~VgRl~~~Kgi~~~l~A~ 287 (726)
T PRK14501 214 YETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQ------DLRGRKIILSIDRLDYTKGIPRRLLAF 287 (726)
T ss_pred CccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHH------HcCCCEEEEEecCcccccCHHHHHHHH
Confidence 1 12368899999999988765432111000000000 024578999999999999999999999
Q ss_pred HHHhccCCC----eEEEEEeCCCCCCCc----hHHHHHHHHhhCC-------C-----------CCccccccccCceEEe
Q 043412 213 LEEFSKADG----VVLYLLTNPYHSGRD----FGNKIVNFVEDSD-------L-----------EKPDDGWAPAADVFVL 266 (383)
Q Consensus 213 ~~l~~~~~~----~~l~i~G~~~~~~~~----~~~~~~~~~~~~~-------~-----------~~~v~~~~~~adi~v~ 266 (383)
.++.+++|+ ++|+++|.+.....+ +..++.+++...+ . .+++..+|+.||++++
T Consensus 288 ~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~ 367 (726)
T PRK14501 288 ERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALV 367 (726)
T ss_pred HHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEe
Confidence 999888886 689888754322212 2333334332211 0 1556789999999999
Q ss_pred cCCCCCCChHHHHHHHcC-----CCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMG-----LPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G-----~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
||..||+|++++|||+|| +||++...|+..++. .|+++++. |+++++++|.+++
T Consensus 368 ~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~---~~llv~P~------------------d~~~la~ai~~~l 426 (726)
T PRK14501 368 TPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA---EALLVNPN------------------DIEGIAAAIKRAL 426 (726)
T ss_pred cccccccCcccceEEEEcCCCCceEEEecccchhHHhC---cCeEECCC------------------CHHHHHHHHHHHH
Confidence 999999999999999994 566666667777764 36777766 9999999999999
Q ss_pred cCH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 342 SNV-DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 342 ~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+++ +.+....+++++.+ .+|||+.+++++.+.|+++..
T Consensus 427 ~~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 427 EMPEEEQRERMQAMQERL-RRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred cCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHh
Confidence 854 45555556788875 689999999999999988743
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-22 Score=185.21 Aligned_cols=216 Identities=15% Similarity=0.076 Sum_probs=149.1
Q ss_pred HHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEee
Q 043412 118 HVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVF 197 (383)
Q Consensus 118 ~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g 197 (383)
....+++||.|+++|+..++.+.+++ .++.+||||+|.+.|.+....... . +.. ...++++++|+|
T Consensus 147 e~~~~~~ad~vi~~S~~l~~~~~~~~---~~i~~i~ngvd~~~f~~~~~~~~~-~---~~~-------~~~~~~~i~y~G 212 (373)
T cd04950 147 ERRLLKRADLVFTTSPSLYEAKRRLN---PNVVLVPNGVDYEHFAAARDPPPP-P---ADL-------AALPRPVIGYYG 212 (373)
T ss_pred HHHHHHhCCEEEECCHHHHHHHhhCC---CCEEEcccccCHHHhhcccccCCC-h---hHH-------hcCCCCEEEEEe
Confidence 34457999999999999999888876 489999999999888764432110 0 000 024578999999
Q ss_pred ccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHH--HHHhhCCCC--CccccccccCceEEecCCC---
Q 043412 198 KWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIV--NFVEDSDLE--KPDDGWAPAADVFVLPSRG--- 270 (383)
Q Consensus 198 ~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~--~~~~~~~~~--~~v~~~~~~adi~v~ps~~--- 270 (383)
++.+.++++.+.++++ ..|+++|+++|++... .....+. .-+..+|.. +++..+++.+|++++|+..
T Consensus 213 ~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~--~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~ 286 (373)
T cd04950 213 AIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS--IDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNEL 286 (373)
T ss_pred ccccccCHHHHHHHHH----HCCCCEEEEECCCcCc--cChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchh
Confidence 9998888776655443 4689999999987211 1111111 112223433 5788999999999999853
Q ss_pred --CCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 271 --EGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 271 --e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
+++|++++||||||+|||+|+.+.. .....+..+..+ |+++++++|.+++.++....
T Consensus 287 ~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~~~~------------------d~~~~~~ai~~~l~~~~~~~ 345 (373)
T cd04950 287 TRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVLIAD------------------DPEEFVAAIEKALLEDGPAR 345 (373)
T ss_pred hhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEEeCC------------------CHHHHHHHHHHHHhcCCchH
Confidence 4689999999999999999986544 333323333323 89999999999765432211
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
.. ++++ +.+.|||+..++++.+.+++
T Consensus 346 ~~--~~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 346 ER--RRLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HH--HHHH-HHHHCCHHHHHHHHHHHHHh
Confidence 11 2222 57789999999999966654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=173.24 Aligned_cols=338 Identities=16% Similarity=0.081 Sum_probs=193.6
Q ss_pred CCCCCChhHHH---HHHHHHHHhcccCCCceeeeecCCCcccchh-----hc-----CCC------hhhhhHHHHHHhhh
Q 043412 4 FLSGGGYSSES---WSYILALNEHVKNPRFKLAIEHHGDLQSLQF-----WE-----GLP------HHMRNLAVELYNTE 64 (383)
Q Consensus 4 ~~~~~G~~~~~---~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~-----~~-----~~~------~~~~~~~~~l~~~~ 64 (383)
+++.||.+-+. . ++++|++.+....+. .+... ..+.... .. ++. ........++.+++
T Consensus 5 ~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~l 81 (380)
T PRK00025 5 AIVAGEVSGDLLGAG-LIRALKARAPNLEFV-GVGGP-RMQAAGCESLFDMEELAVMGLVEVLPRLPRLLKIRRRLKRRL 81 (380)
T ss_pred EEEecCcCHHHHHHH-HHHHHHhcCCCcEEE-EEccH-HHHhCCCccccCHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777765 6 999999876544432 22211 1111100 00 110 01234556778888
Q ss_pred cCCCccEEEecCCCCCCCCcc-cccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcC
Q 043412 65 CRTNETVVICHSEPGAWYPPL-FDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSG 143 (383)
Q Consensus 65 ~~~~pDiV~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~ 143 (383)
++++||+||++...+.|.... .......++ +.+..+ ..|. .......+..+.+|.+++.|+..++.+.+.|
T Consensus 82 ~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~-----i~~~~~-~~~~--~~~~~~~~~~~~~d~i~~~~~~~~~~~~~~g 153 (380)
T PRK00025 82 LAEPPDVFIGIDAPDFNLRLEKKLRKAGIPT-----IHYVSP-SVWA--WRQGRAFKIAKATDHVLALFPFEAAFYDKLG 153 (380)
T ss_pred HHcCCCEEEEeCCCCCCHHHHHHHHHCCCCE-----EEEeCC-chhh--cCchHHHHHHHHHhhheeCCccCHHHHHhcC
Confidence 999999999986433332111 111111111 111111 1111 1122233346789999999999999998877
Q ss_pred CCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEE-EEEee-ccccc-cCHHHHHHHHHHHhccCC
Q 043412 144 VDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFV-FLSVF-KWEYR-KGWDVLLKAYLEEFSKAD 220 (383)
Q Consensus 144 ~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-i~~~g-~~~~~-K~~~~ll~a~~~l~~~~~ 220 (383)
. ++.+++|++.......... ...+.+++ ++++.++ +++.| +..+. +..+.+++++..+.++.|
T Consensus 154 ~---~~~~~G~p~~~~~~~~~~~----~~~~~~l~-------~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~ 219 (380)
T PRK00025 154 V---PVTFVGHPLADAIPLLPDR----AAARARLG-------LDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYP 219 (380)
T ss_pred C---CeEEECcCHHHhcccccCh----HHHHHHcC-------CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5 3777777764322111110 01111222 3444544 45555 33333 457889999999988888
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhC-CCC-----CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC-C
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDS-DLE-----KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW-S 293 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~~-----~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~-~ 293 (383)
+++++++|++ .+..+.+++.+... ++. +++..+|+.||+++.+| |.+.+|||++|+|+|++.. +
T Consensus 220 ~~~~ii~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~ 290 (380)
T PRK00025 220 DLRFVLPLVN----PKRREQIEEALAEYAGLEVTLLDGQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVS 290 (380)
T ss_pred CeEEEEecCC----hhhHHHHHHHHhhcCCCCeEEEcccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccC
Confidence 9999999863 14456666666655 442 56789999999999987 7888899999999998722 2
Q ss_pred CccccccC---CCceeeecccccccccCC--CCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHH
Q 043412 294 GPTEYLTE---ENGYPLLVGRMSEVTEGP--FKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368 (383)
Q Consensus 294 g~~e~v~~---~~g~~~~~~~~~~~~~~~--~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~ 368 (383)
..+..+.+ .+.+ ..++++..+. ..+++.+..|++++++++.++++|++.+++|++++.+.. +.. ....+
T Consensus 291 ~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~~~-~~~a~ 364 (380)
T PRK00025 291 PLTFWIAKRLVKVPY----VSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELH-QQL-RCGAD 364 (380)
T ss_pred HHHHHHHHHHHcCCe----eehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHh-CCCHH
Confidence 22211111 0100 0012222222 233444555999999999999999999999999876533 222 22345
Q ss_pred HHHHHHHHHHHhc
Q 043412 369 GIVTDHIKDILSS 381 (383)
Q Consensus 369 ~~~~~~~~~~~~~ 381 (383)
+++.+.+.+++.+
T Consensus 365 ~~~~~~i~~~~~~ 377 (380)
T PRK00025 365 ERAAQAVLELLKQ 377 (380)
T ss_pred HHHHHHHHHHhhh
Confidence 5665665555443
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.6e-20 Score=169.10 Aligned_cols=279 Identities=13% Similarity=0.072 Sum_probs=190.3
Q ss_pred ccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cC
Q 043412 69 ETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SG 143 (383)
Q Consensus 69 pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~ 143 (383)
-|+|-+|+.+....+..+.........++.-....-...++..-++...+.+.+-.+|.|-..+...++.|.+ .|
T Consensus 133 ~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg 212 (487)
T TIGR02398 133 GATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMP 212 (487)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhC
Confidence 3799999766555554444332111101100001111223333445666777789999999999998887654 12
Q ss_pred CC--------------------------------CCCeEEecCCCcCCCCCCCCCCCCccc--cCCccccccCCCCCCCC
Q 043412 144 VD--------------------------------PAKVVKIVQPVHVGFFDPVNCDPIDLA--SIGKPVLGLSNMNTSSK 189 (383)
Q Consensus 144 ~~--------------------------------~~~i~vi~ngid~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~ 189 (383)
.. .-++.++|.|||++.|.+......... ..-+..+ .+
T Consensus 213 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~--------~~ 284 (487)
T TIGR02398 213 LQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSEL--------AG 284 (487)
T ss_pred CccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHc--------CC
Confidence 11 112688999999998865433221110 0011112 25
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCC----eEEEEEeCCCCCCCc----hHHHHHHHHhhC-------CCC---
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG----VVLYLLTNPYHSGRD----FGNKIVNFVEDS-------DLE--- 251 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~----~~~~~~~~~~~~-------~~~--- 251 (383)
+.+|++++|++..||+...++|+.++++++|+ +.|+.+|.+...+.+ +..++++++... +..
T Consensus 285 ~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~ 364 (487)
T TIGR02398 285 VKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQ 364 (487)
T ss_pred ceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEE
Confidence 78999999999999999999999999999996 789999887543322 334455555443 221
Q ss_pred --------CccccccccCceEEecCCCCCCChHHHHHHHcCC----CEEEcCCCCccccccCCCceeeecccccccccCC
Q 043412 252 --------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGL----PVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGP 319 (383)
Q Consensus 252 --------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~----PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~ 319 (383)
+++..+|+.||+++.||..||++++..|+++|+. |+|.|..+|..+.+. .+++|+|.
T Consensus 365 ~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~--~AllVNP~--------- 433 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELK--GALLTNPY--------- 433 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhcC--CCEEECCC---------
Confidence 4456899999999999999999999999999988 999999998886662 45666655
Q ss_pred CCcccccCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 320 FKGHFWAEPSVDKLRALMRLVVSNV-DEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 320 ~~g~~~~~~~~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
|++++|++|.++++.| +++++.-+..++. ...++...+++.+.+-++
T Consensus 434 ---------d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~-v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 434 ---------DPVRMDETIYVALAMPKAEQQARMREMFDA-VNYYDVQRWADEFLAAVS 481 (487)
T ss_pred ---------CHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HhhCCHHHHHHHHHHHhh
Confidence 9999999999999965 4454444555554 567899999998886654
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-20 Score=171.08 Aligned_cols=255 Identities=13% Similarity=0.097 Sum_probs=160.5
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCC-CcccccCCCCCCCCCCCccccccee--eeecCCCCHHHHHh-c-CCCCEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWY-PPLFDTLPCPPTPGYGDFMAVIGRT--MFETDRVSPEHVKR-C-NRMDFV 128 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~-~~ad~v 128 (383)
...+..+.+++++++||+||+|......+ ....+.....++ . +..+.. ......++..+.+. + +.+|.+
T Consensus 72 ~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv-----~-h~~~g~~s~~~~~~~~~~~~r~~~~~~ad~~ 145 (365)
T TIGR00236 72 SNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPV-----G-HVEAGLRTGDRYSPMPEEINRQLTGHIADLH 145 (365)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCE-----E-EEeCCCCcCCCCCCCccHHHHHHHHHHHHhc
Confidence 34457788899999999999996533211 111111111111 1 111100 00001123333232 2 358999
Q ss_pred EEeChHHHHHHHhcCCCCCCeEEecCCC-cCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc-ccccCHH
Q 043412 129 WVPTDFHVSTFIRSGVDPAKVVKIVQPV-HVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW-EYRKGWD 206 (383)
Q Consensus 129 i~~s~~~~~~~~~~~~~~~~i~vi~ngi-d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~-~~~K~~~ 206 (383)
+++|+..++.+.+.|.+++++.+++|++ |........... .....+++ .++.++++..++. ...|+++
T Consensus 146 ~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~--~~~~~~~~--------~~~~~vl~~~hr~~~~~k~~~ 215 (365)
T TIGR00236 146 FAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYS--SPVLSEFG--------EDKRYILLTLHRRENVGEPLE 215 (365)
T ss_pred cCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccc--hhHHHhcC--------CCCCEEEEecCchhhhhhHHH
Confidence 9999999999999999999999999996 432211111100 00011111 1234444444454 2458999
Q ss_pred HHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC-----------ccccccccCceEEecCCCCCCCh
Q 043412 207 VLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-----------PDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 207 ~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
.+++|+.++.++.|++++++.|.+. ......+.+. ++..+ ++..+++.+|+++.+| |.
T Consensus 216 ~ll~a~~~l~~~~~~~~~vi~~~~~---~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~ 284 (365)
T TIGR00236 216 NIFKAIREIVEEFEDVQIVYPVHLN---PVVREPLHKH---LGDSKRVHLIEPLEYLDFLNLAANSHLILTDS-----GG 284 (365)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCC---hHHHHHHHHH---hCCCCCEEEECCCChHHHHHHHHhCCEEEECC-----hh
Confidence 9999999988778899999886542 1222223222 22222 2336679999999887 45
Q ss_pred HHHHHHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
.++|||+||+|||++ +.++..+.+..+++.+++ . |++++++++.++++|++.+++|+.+.
T Consensus 285 ~~~EA~a~g~PvI~~~~~~~~~e~~~~g~~~lv~-~------------------d~~~i~~ai~~ll~~~~~~~~~~~~~ 345 (365)
T TIGR00236 285 VQEEAPSLGKPVLVLRDTTERPETVEAGTNKLVG-T------------------DKENITKAAKRLLTDPDEYKKMSNAS 345 (365)
T ss_pred HHHHHHHcCCCEEECCCCCCChHHHhcCceEEeC-C------------------CHHHHHHHHHHHHhChHHHHHhhhcC
Confidence 689999999999996 567788888776666553 2 89999999999999999888887664
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-17 Score=151.58 Aligned_cols=217 Identities=26% Similarity=0.356 Sum_probs=172.5
Q ss_pred CCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCC--cEEEEEeecccc
Q 043412 124 RMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSK--EFVFLSVFKWEY 201 (383)
Q Consensus 124 ~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~i~~~g~~~~ 201 (383)
.++.++..+......+...... .++.+++++++...+.+.... ..++ ...++++|++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~~g~~~~ 210 (381)
T COG0438 150 LADRVIAVSPALKELLEALGVP-NKIVVIPNGIDTEKFAPARIG------------------LLPEGGKFVVLYVGRLDP 210 (381)
T ss_pred cccEEEECCHHHHHHHHHhCCC-CCceEecCCcCHHHcCccccC------------------CCcccCceEEEEeeccCh
Confidence 4888999999887777665443 378999999998877653111 0122 378999999999
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEecCCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLPSRG 270 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~ps~~ 270 (383)
.||++.+++++..+....+++.+.++|.+... .+.+...+...+.. +++..+++.+|++++||..
T Consensus 211 ~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~ 286 (381)
T COG0438 211 EKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLS 286 (381)
T ss_pred hcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEecccc
Confidence 99999999999999887777999999998432 33444444444332 2455677889999999999
Q ss_pred CCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHH
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKA 349 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~ 349 (383)
|++|++++|||++|+|||+++.++..+++.++ +|++++.. +.+++++++..++++++.++.
T Consensus 287 e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~------------------~~~~~~~~i~~~~~~~~~~~~ 348 (381)
T COG0438 287 EGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPG------------------DVEELADALEQLLEDPELREE 348 (381)
T ss_pred ccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCC------------------CHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999999999999886 47655443 799999999999999987888
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 350 KGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 350 ~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
+.+++++.+.+.|+|+..++++.+++......
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (381)
T COG0438 349 LGEAARERVEEEFSWERIAEQLLELYEELLAE 380 (381)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 88766666668999999999999999887653
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=148.86 Aligned_cols=108 Identities=32% Similarity=0.398 Sum_probs=86.8
Q ss_pred EeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC------------CCccccccccCc
Q 043412 195 SVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL------------EKPDDGWAPAAD 262 (383)
Q Consensus 195 ~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~ad 262 (383)
++|++.+.||++.+++++..+.++.++++++++|.+.. .......+...+. .+.+..+++.||
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~d 183 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE-----REYLEELLAALLLLDRVIFLGGLDPEELLALLLAAAD 183 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC-----hHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCC
Confidence 88899999999999999999998889999999998732 2222221222222 234456667799
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC-CCceee
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPL 307 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~~g~~~ 307 (383)
++++||..|++|++++|||++|+|+|+|+.++..|++.+ ++|+++
T Consensus 184 i~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 184 VFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred EEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 999999999999999999999999999999999998876 477653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=155.78 Aligned_cols=252 Identities=11% Similarity=0.014 Sum_probs=156.2
Q ss_pred HHHHHhhhcCCCc-cEEEecCCCCCCC---Cccc---ccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEE
Q 043412 57 AVELYNTECRTNE-TVVICHSEPGAWY---PPLF---DTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVW 129 (383)
Q Consensus 57 ~~~l~~~~~~~~p-DiV~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 129 (383)
...+.+++.+.++ |+||.+++..... ..++ .....+.+..+++..... ..............+++||.++
T Consensus 52 ~~~~~~~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~---~~~~~~~~~~~~~~~~~aD~iI 128 (333)
T PRK09814 52 SKRLDGILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR---FDSNYYLMKEEIDMLNLADVLI 128 (333)
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh---ccccchhhHHHHHHHHhCCEEE
Confidence 3445556777888 9999998543210 1111 111122332223322110 0011111233445589999999
Q ss_pred EeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHH
Q 043412 130 VPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLL 209 (383)
Q Consensus 130 ~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll 209 (383)
++|+.+++.+.+.|+++.++.++++..+.....+... .+..+.++|+|++...+. +
T Consensus 129 ~~S~~~~~~l~~~g~~~~~i~~~~~~~~~~~~~~~~~--------------------~~~~~~i~yaG~l~k~~~----l 184 (333)
T PRK09814 129 VHSKKMKDRLVEEGLTTDKIIVQGIFDYLNDIELVKT--------------------PSFQKKINFAGNLEKSPF----L 184 (333)
T ss_pred ECCHHHHHHHHHcCCCcCceEeccccccccccccccc--------------------ccCCceEEEecChhhchH----H
Confidence 9999999999999887778888776543321111000 123568999999984321 1
Q ss_pred HHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCC-----------CCCCChH
Q 043412 210 KAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSR-----------GEGWGRP 276 (383)
Q Consensus 210 ~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~-----------~e~~~~~ 276 (383)
. ...++++|+++|+|+... .....+...|.. +++..+++. |+.+.+.. .-.+|.+
T Consensus 185 ~------~~~~~~~l~i~G~g~~~~-----~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K 252 (333)
T PRK09814 185 K------NWSQGIKLTVFGPNPEDL-----ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHK 252 (333)
T ss_pred H------hcCCCCeEEEECCCcccc-----ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHH
Confidence 1 134689999999985321 111122223332 455566666 54443321 2367889
Q ss_pred HHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043412 277 LVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAR 355 (383)
Q Consensus 277 ~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~ 355 (383)
+.|+||||+|||+++.++..+++.++ +|++++ +.+++++++..+ +++.+.+|+++++
T Consensus 253 ~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~--------------------~~~el~~~l~~~--~~~~~~~m~~n~~ 310 (333)
T PRK09814 253 LSLYLAAGLPVIVWSKAAIADFIVENGLGFVVD--------------------SLEELPEIIDNI--TEEEYQEMVENVK 310 (333)
T ss_pred HHHHHHCCCCEEECCCccHHHHHHhCCceEEeC--------------------CHHHHHHHHHhc--CHHHHHHHHHHHH
Confidence 99999999999999999999999885 888887 788999999985 4577899999998
Q ss_pred HHHHhcCCHHHHHHH
Q 043412 356 EDMIQRFSPETVAGI 370 (383)
Q Consensus 356 ~~~~~~~s~~~~~~~ 370 (383)
+. .+.+.-...+++
T Consensus 311 ~~-~~~~~~g~~~~~ 324 (333)
T PRK09814 311 KI-SKLLRNGYFTKK 324 (333)
T ss_pred HH-HHHHhcchhHHH
Confidence 85 455544444333
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.8e-19 Score=163.42 Aligned_cols=269 Identities=13% Similarity=0.073 Sum_probs=164.5
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCC-CcccccCCCCCCCCCCCcccccceeeeecCCCCHHHH-HhcCCCCEEEEe
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWY-PPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHV-KRCNRMDFVWVP 131 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ad~vi~~ 131 (383)
......+.+.+++.+||+||+|....... ....+.....++ .....|...|.......... ...+.+|.++++
T Consensus 74 ~~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iPv-----v~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~~ 148 (363)
T cd03786 74 AGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIPV-----AHVEAGLRSFDRGMPDEENRHAIDKLSDLHFAP 148 (363)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCCE-----EEEecccccCCCCCCchHHHHHHHHHhhhccCC
Confidence 33557777888888999999996432211 111111111111 11111111110011111111 124678999999
Q ss_pred ChHHHHHHHhcCCCCCCeEEecCCC-cCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc---ccCHHH
Q 043412 132 TDFHVSTFIRSGVDPAKVVKIVQPV-HVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY---RKGWDV 207 (383)
Q Consensus 132 s~~~~~~~~~~~~~~~~i~vi~ngi-d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~---~K~~~~ 207 (383)
|+..++.+.+.|++++++.+++|++ |...+.+...... ..+...+ ++++.+++++.|+... .|+++.
T Consensus 149 s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~--~~~~~~~-------~~~~~~vlv~~~r~~~~~~~k~~~~ 219 (363)
T cd03786 149 TEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKE--LILELLG-------LLPKKYILVTLHRVENVDDGEQLEE 219 (363)
T ss_pred CHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccc--hhhhhcc-------cCCCCEEEEEeCCccccCChHHHHH
Confidence 9999999999999999999999985 5432221111100 0011122 2456677888888764 799999
Q ss_pred HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-C-----------CccccccccCceEEecCCCCCCCh
Q 043412 208 LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-E-----------KPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 208 ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-~-----------~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
++++++++... ++.+++.|.+ .....+++.+..++. . +++..+|+.||++|.+|. |
T Consensus 220 l~~al~~l~~~--~~~vi~~~~~-----~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g- 287 (363)
T cd03786 220 ILEALAELAEE--DVPVVFPNHP-----RTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKNADLVLTDSG----G- 287 (363)
T ss_pred HHHHHHHHHhc--CCEEEEECCC-----ChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHcCcEEEEcCc----c-
Confidence 99999988543 5676666654 345566666555432 1 345577899999999984 3
Q ss_pred HHHHHHHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
...|||++|+|+|+++. +...+.++.+.+..+. .|+++++++|.++++++..+..|.
T Consensus 288 i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~~~~~~-------------------~~~~~i~~~i~~ll~~~~~~~~~~--- 345 (363)
T cd03786 288 IQEEASFLGVPVLNLRDRTERPETVESGTNVLVG-------------------TDPEAILAAIEKLLSDEFAYSLMS--- 345 (363)
T ss_pred HHhhhhhcCCCEEeeCCCCccchhhheeeEEecC-------------------CCHHHHHHHHHHHhcCchhhhcCC---
Confidence 47899999999999975 3355555444332222 169999999999999988776663
Q ss_pred HHHHHhcCCHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~ 374 (383)
...|.-...++++.++
T Consensus 346 ----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 346 ----INPYGDGNASERIVEI 361 (363)
T ss_pred ----CCCCCCCHHHHHHHHH
Confidence 2334444445555444
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-17 Score=138.71 Aligned_cols=217 Identities=16% Similarity=0.176 Sum_probs=171.8
Q ss_pred CCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 123 NRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 123 ~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
..||.+.+.|.++.+.+.+ .+. .++.+++.+.+++......... ..+.+.++++|.+.|
T Consensus 221 ~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~~~te------------------~~r~~~ll~l~Q~RP 280 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSKFGTE------------------GERENQLLSLAQFRP 280 (465)
T ss_pred ccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHHhccc------------------CCcceEEEEEeecCc
Confidence 7799999999999999998 443 5889999998887443322210 245788999999999
Q ss_pred ccCHHHHHHHHHHHhcc------CCCeEEEEEeCCCC-CCCchHHHHHHHHhhCCCCCc-----------cccccccCce
Q 043412 202 RKGWDVLLKAYLEEFSK------ADGVVLYLLTNPYH-SGRDFGNKIVNFVEDSDLEKP-----------DDGWAPAADV 263 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~------~~~~~l~i~G~~~~-~~~~~~~~~~~~~~~~~~~~~-----------v~~~~~~adi 263 (383)
.|+.. +++.+.....+ .++++|+++|+-.. ++.++...++++++++.++++ +..++..|.+
T Consensus 281 EKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~i 359 (465)
T KOG1387|consen 281 EKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKATI 359 (465)
T ss_pred ccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhcccee
Confidence 99999 45444333322 35799999998754 445566888899999988744 4577899999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCC-CccccccC----CCceeeecccccccccCCCCcccccCCCHHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWS-GPTEYLTE----ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMR 338 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~-g~~e~v~~----~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~ 338 (383)
.+.+-..|-||+.++|+||+|+-.|+.+.| +.-|++.+ .+|++.+ +.++.++++.
T Consensus 360 Gvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--------------------t~~EYaE~iL 419 (465)
T KOG1387|consen 360 GVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--------------------TDEEYAEAIL 419 (465)
T ss_pred ehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--------------------ChHHHHHHHH
Confidence 999999999999999999999977777764 45677764 2566554 8899999999
Q ss_pred HHhc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 339 LVVS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 339 ~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
+++. |++.+..|+++||+. ..+|+-...-+.+...+.+++.+
T Consensus 420 kIv~~~~~~r~~~r~~AR~s-~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 420 KIVKLNYDERNMMRRNARKS-LARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HHHHcCHHHHHHHHHHHHHH-HHHhhHHHHHHhHhHHHHHhhcc
Confidence 9987 788899999999996 57899999999999999888764
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=164.19 Aligned_cols=282 Identities=15% Similarity=0.115 Sum_probs=187.4
Q ss_pred cEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cCC
Q 043412 70 TVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SGV 144 (383)
Q Consensus 70 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~~ 144 (383)
|+|.+|+.+...++.++....-....++......-...+|..-.+...+.+.+-.||.|-+.+....+.|.+ .|.
T Consensus 233 D~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~ 312 (934)
T PLN03064 233 DVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGL 312 (934)
T ss_pred CEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCc
Confidence 799999876555554444332111101100011111223333345666777789999999999999887764 222
Q ss_pred C-----------CCCeEEecCCCcCCCCCCCCCCCCccccC--CccccccCCCCCCCCcEEEEEeeccccccCHHHHHHH
Q 043412 145 D-----------PAKVVKIVQPVHVGFFDPVNCDPIDLASI--GKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKA 211 (383)
Q Consensus 145 ~-----------~~~i~vi~ngid~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a 211 (383)
. ..++.+.|-|||.+.|............. -+.. -.++.+|++++|++..||+...++|
T Consensus 313 ~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~--------~~g~kiIlgVDRLD~~KGI~~kL~A 384 (934)
T PLN03064 313 EGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKER--------FAGRKVMLGVDRLDMIKGIPQKILA 384 (934)
T ss_pred cccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHH--------hCCceEEEEeeccccccCHHHHHHH
Confidence 1 12356779999998886543221100000 0111 1357899999999999999999999
Q ss_pred HHHHhccCCCeE--EEEE--eCCCCCCCchHHH----HHHHHhhCC----C-------------C-CccccccccCceEE
Q 043412 212 YLEEFSKADGVV--LYLL--TNPYHSGRDFGNK----IVNFVEDSD----L-------------E-KPDDGWAPAADVFV 265 (383)
Q Consensus 212 ~~~l~~~~~~~~--l~i~--G~~~~~~~~~~~~----~~~~~~~~~----~-------------~-~~v~~~~~~adi~v 265 (383)
+.++++++|+++ ++++ ......+.+.... +.+++...+ - . +++..+|+.||+++
T Consensus 385 fE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~l 464 (934)
T PLN03064 385 FEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVAL 464 (934)
T ss_pred HHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEE
Confidence 999999888753 3333 3322222223333 333333322 1 0 44568999999999
Q ss_pred ecCCCCCCChHHHHHHHcCC----CEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 266 LPSRGEGWGRPLVEAMSMGL----PVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 266 ~ps~~e~~~~~~~Ea~a~G~----PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
.||..||++++..|||+|+. ++|.|...|..+.+. ..+++|+|. |+++++++|.+++
T Consensus 465 vTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L~-~~AllVNP~------------------D~~~vA~AI~~AL 525 (934)
T PLN03064 465 VTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLG-AGAILVNPW------------------NITEVAASIAQAL 525 (934)
T ss_pred eCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHhC-CceEEECCC------------------CHHHHHHHHHHHH
Confidence 99999999999999999954 455588888887772 245666655 9999999999999
Q ss_pred c-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 342 S-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 342 ~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
+ ++++++.+.++.++.+ ..+|+..+++.+.+-+.+..
T Consensus 526 ~M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 526 NMPEEEREKRHRHNFMHV-TTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred hCCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHHHHHH
Confidence 8 8888888888888874 67999999999888777664
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.7e-17 Score=150.10 Aligned_cols=323 Identities=14% Similarity=0.058 Sum_probs=181.1
Q ss_pred CCCCChhHHHH--HHHHHHHhcccCCCceeeeecCCCc--------ccchhh--cCCC------hhhhhHHHHHHhhhcC
Q 043412 5 LSGGGYSSESW--SYILALNEHVKNPRFKLAIEHHGDL--------QSLQFW--EGLP------HHMRNLAVELYNTECR 66 (383)
Q Consensus 5 ~~~~G~~~~~~--~l~~~l~~~g~~~~~~~~~~~~~~~--------~~~~~~--~~~~------~~~~~~~~~l~~~~~~ 66 (383)
++.||.+-|.+ .++++|++.+....+ +.++ .+.. .+...+ .++. ....+...++.+++++
T Consensus 10 i~aGgtsGhi~paal~~~l~~~~~~~~~-~g~g-g~~m~~~g~~~~~~~~~l~v~G~~~~l~~~~~~~~~~~~~~~~l~~ 87 (385)
T TIGR00215 10 LVAGEASGDILGAGLRQQLKEHYPNARF-IGVA-GPRMAAEGCEVLYSMEELSVMGLREVLGRLGRLLKIRKEVVQLAKQ 87 (385)
T ss_pred EEeCCccHHHHHHHHHHHHHhcCCCcEE-EEEc-cHHHHhCcCccccChHHhhhccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56777766433 899999987654332 2222 1111 111100 1111 1223345667788899
Q ss_pred CCccEEEecCCCCCCCCcc--cccCCCCCCCCCCCccccc-ceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcC
Q 043412 67 TNETVVICHSEPGAWYPPL--FDTLPCPPTPGYGDFMAVI-GRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSG 143 (383)
Q Consensus 67 ~~pDiV~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~ 143 (383)
++||+|++++.++ +...+ .......++ +.+.. ..|.|...+ -....+.+|.+++.++...+.+.+.+
T Consensus 88 ~kPd~vi~~g~~~-~~~~~a~aa~~~gip~-----v~~i~P~~waw~~~~----~r~l~~~~d~v~~~~~~e~~~~~~~g 157 (385)
T TIGR00215 88 AKPDLLVGIDAPD-FNLTKELKKKDPGIKI-----IYYISPQVWAWRKWR----AKKIEKATDFLLAILPFEKAFYQKKN 157 (385)
T ss_pred cCCCEEEEeCCCC-ccHHHHHHHhhCCCCE-----EEEeCCcHhhcCcch----HHHHHHHHhHhhccCCCcHHHHHhcC
Confidence 9999999998533 22111 111211111 22211 123343222 22224679999999999999988766
Q ss_pred CCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEE-Eee-cccc-ccCHHHHHHHHHHHhccCC
Q 043412 144 VDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFL-SVF-KWEY-RKGWDVLLKAYLEEFSKAD 220 (383)
Q Consensus 144 ~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~-~~g-~~~~-~K~~~~ll~a~~~l~~~~~ 220 (383)
. ++.+++|++.......... ....+.+++ ++++.++++ ..| |..+ .|+...+++++..+.++.|
T Consensus 158 ~---~~~~vGnPv~~~~~~~~~~---~~~~r~~lg-------l~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p 224 (385)
T TIGR00215 158 V---PCRFVGHPLLDAIPLYKPD---RKSAREKLG-------IDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEP 224 (385)
T ss_pred C---CEEEECCchhhhccccCCC---HHHHHHHcC-------CCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCC
Confidence 4 6678888874322110000 000111222 245555554 344 5555 6889999999999988889
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC-
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW- 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~- 292 (383)
++++++.+... ...+.+++....++.. .+...+|+.||++|++| |.+.+|+|++|+|+|....
T Consensus 225 ~~~~vi~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~ 295 (385)
T TIGR00215 225 DLRRVLPVVNF----KRRLQFEQIKAEYGPDLQLHLIDGDARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRM 295 (385)
T ss_pred CeEEEEEeCCc----hhHHHHHHHHHHhCCCCcEEEECchHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcC
Confidence 99987765431 2234444444443222 45567889999999999 7778899999999888843
Q ss_pred CCccccccCCCceeeecccccccccCCCCcccc--cCCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHhcCC
Q 043412 293 SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFW--AEPSVDKLRALMRLVVSNV----DEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 293 ~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~--~~~~~~~la~~i~~ll~~~----~~~~~~~~~a~~~~~~~~s 363 (383)
+.....+... -+-++.-.+|++..+..-...+ .+.+++.+++.+.++++|+ +.++++.+.-.+ +.+...
T Consensus 296 ~pl~~~~~~~-~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~-~~~~l~ 370 (385)
T TIGR00215 296 KPLTFLIARR-LVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEE-LRQRIY 370 (385)
T ss_pred CHHHHHHHHH-HHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHH-HHHHhc
Confidence 2222222211 0000111123333333222222 2238999999999999999 888777666554 444443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-16 Score=150.36 Aligned_cols=206 Identities=14% Similarity=0.110 Sum_probs=158.0
Q ss_pred HhcCCCCEEEEeChHHHHHHHh-cC-C-CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEe
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIR-SG-V-DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSV 196 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~-~~-~-~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~ 196 (383)
..+.++|.+|+.++..++.+.. ++ . ...++..||.+.- ... +..+. .....++++
T Consensus 268 ~~~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~~-~~~s~--------------------r~~~~~I~v 325 (519)
T TIGR03713 268 ESLSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RLR-LGQSQ--------------------QLYETEIGF 325 (519)
T ss_pred hChhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EEe-cChhh--------------------cccceEEEE
Confidence 3467899999999887776665 32 1 1135667775432 111 11111 112346666
Q ss_pred e--ccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC------------------------
Q 043412 197 F--KWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL------------------------ 250 (383)
Q Consensus 197 g--~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~------------------------ 250 (383)
+ |+ +.|.++.+++++.++..+.|+++|.+.|.+.+ ......+++.+++++.
T Consensus 326 ~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~--~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (519)
T TIGR03713 326 WIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND--NDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTD 402 (519)
T ss_pred EcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc--hhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccch
Confidence 6 99 99999999999999999999999999998732 2334555444444322
Q ss_pred --------------CC--ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-Cceeeeccccc
Q 043412 251 --------------EK--PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMS 313 (383)
Q Consensus 251 --------------~~--~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~ 313 (383)
.. ++...|..+.+++.+|..|+++ +.+||+++|+|+| .-|..++|.++ ||+++.
T Consensus 403 ~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li~----- 473 (519)
T TIGR03713 403 EEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYIID----- 473 (519)
T ss_pred hhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEeC-----
Confidence 23 5668889999999999999999 9999999999999 44568889886 999995
Q ss_pred ccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 314 EVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 314 ~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
|.++|++++..+|.+++.++++...+.+. .++||-++++++|.+++
T Consensus 474 ---------------d~~~l~~al~~~L~~~~~wn~~~~~sy~~-~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 474 ---------------DISELLKALDYYLDNLKNWNYSLAYSIKL-IDDYSSENIIERLNELI 519 (519)
T ss_pred ---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH-HHHhhHHHHHHHHHhhC
Confidence 99999999999999999999999999997 58899999999998753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-17 Score=128.33 Aligned_cols=130 Identities=23% Similarity=0.250 Sum_probs=91.7
Q ss_pred cEEEEEeeccccccCHHHHHH-HHHHHhccCCCeEEEEEeCCCCCCCchHHHH-HHHHhhCCCCCccccccccCceEEec
Q 043412 190 EFVFLSVFKWEYRKGWDVLLK-AYLEEFSKADGVVLYLLTNPYHSGRDFGNKI-VNFVEDSDLEKPDDGWAPAADVFVLP 267 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~-a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~adi~v~p 267 (383)
-+++++.|++.+.|+++.+++ ++.++.++.|+++|+|+|.++. ..+++ .+.+...+..+++..+++.||+++.|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p 77 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRLRRPNVRFHGFVEELPEILAAADVGLIP 77 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEE
Confidence 467999999999999999999 9999999999999999998632 12222 22333344446788999999999999
Q ss_pred CC-CCCCChHHHHHHHcCCCEEEcCCCCccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcC
Q 043412 268 SR-GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSN 343 (383)
Q Consensus 268 s~-~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~ 343 (383)
+. .++++.+++|||++|+|||+++. +..++... +.|.++ .+ |+++++++|.++++|
T Consensus 78 ~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~------------------~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 78 SRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-AN------------------DPEELAEAIERLLND 135 (135)
T ss_dssp BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-------------------HHHHHHHHHHHHH-
T ss_pred eeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CC------------------CHHHHHHHHHHHhcC
Confidence 85 67899999999999999999999 56666654 455555 43 999999999999875
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.7e-15 Score=139.97 Aligned_cols=249 Identities=12% Similarity=0.043 Sum_probs=175.3
Q ss_pred hcCCCCEEEEeChHHHHHHHh-cC-------CCCCCeEEecCCCcCCCCCCCCCCCC-----------------------
Q 043412 121 RCNRMDFVWVPTDFHVSTFIR-SG-------VDPAKVVKIVQPVHVGFFDPVNCDPI----------------------- 169 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~-~~-------~~~~~i~vi~ngid~~~~~~~~~~~~----------------------- 169 (383)
.+..||.|.++|+...+..+. ++ ....++.-|.||||...+.+......
T Consensus 259 ai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~ 338 (601)
T TIGR02094 259 ALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAID 338 (601)
T ss_pred HHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcc
Confidence 368899999999999884443 21 11235888999999988765432111
Q ss_pred --------ccccCCcccccc----------------------CCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhc--
Q 043412 170 --------DLASIGKPVLGL----------------------SNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFS-- 217 (383)
Q Consensus 170 --------~~~~~~~~~l~~----------------------~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~-- 217 (383)
..+...+..|.. ..+.++++.+++++++|+..+||.++++.++.++.+
T Consensus 339 ~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~ 418 (601)
T TIGR02094 339 DIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARIL 418 (601)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHh
Confidence 000000111100 012256788999999999999999999999888864
Q ss_pred cC--CCeEEEEEeCCCCCCC---chHHHHHHHHhhCCCCCcc-----------ccccccCceEEe-cCC-CCCCChHHHH
Q 043412 218 KA--DGVVLYLLTNPYHSGR---DFGNKIVNFVEDSDLEKPD-----------DGWAPAADVFVL-PSR-GEGWGRPLVE 279 (383)
Q Consensus 218 ~~--~~~~l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~v-----------~~~~~~adi~v~-ps~-~e~~~~~~~E 279 (383)
+. .+++|++.|.+.+.+. .+...+.++.+.....+++ ..+++.||++++ ||+ +|++|++-|-
T Consensus 419 ~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMk 498 (601)
T TIGR02094 419 NNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMK 498 (601)
T ss_pred hCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHH
Confidence 22 4699999999854221 2445555555553344443 366799999999 999 9999999999
Q ss_pred HHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh-----cC-----HHHHHH
Q 043412 280 AMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV-----SN-----VDEAKA 349 (383)
Q Consensus 280 a~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll-----~~-----~~~~~~ 349 (383)
||..|.+.+++-.|...|..+.+|||.+..+.. + .+...-+..|+++|.++|++.+ ++ |+.+.+
T Consensus 499 a~~nGgL~~sv~DG~~~E~~~~~nGf~f~~~~~-~-----~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~ 572 (601)
T TIGR02094 499 AAMNGVLNLSILDGWWGEGYDGDNGWAIGDGEE-Y-----DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVE 572 (601)
T ss_pred HHHcCCceeecccCcccccCCCCcEEEECCCcc-c-----cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHH
Confidence 999999999999998888886679999875210 0 0111223459999999997655 23 556788
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 350 KGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 350 ~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
|.+++.......|||++++++|.+.|
T Consensus 573 ~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 573 MMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 88888765555899999999999887
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-14 Score=105.51 Aligned_cols=91 Identities=25% Similarity=0.365 Sum_probs=83.4
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
+++.|+..+++++.++|+||||+|+|+++.+++.+++.++ .++.++ |++++.+++..++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--------------------~~~el~~~i~~ll 60 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--------------------DPEELAEKIEYLL 60 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--------------------CHHHHHHHHHHHH
Confidence 4678988899999999999999999999999999999887 556555 8999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
+||+.+++++++|++.+.++|+|+..++++.+
T Consensus 61 ~~~~~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 61 ENPEERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 99999999999999999999999999998863
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.4e-13 Score=119.88 Aligned_cols=307 Identities=15% Similarity=0.131 Sum_probs=190.7
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeee-ecCCCc------ccchhhcCCChhhhhHHHHHHhhhcCCCccEEEecCCCC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAI-EHHGDL------QSLQFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPG 79 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~ 79 (383)
+=|-.+.+.-+++.|.+......+.+.. +..|.- .+.-...-+|.+.. ..+.++++..+||+++.... .
T Consensus 58 SVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D~~---~~v~rFl~~~~P~l~Ii~Et-E 133 (419)
T COG1519 58 SVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLDLP---IAVRRFLRKWRPKLLIIMET-E 133 (419)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcCch---HHHHHHHHhcCCCEEEEEec-c
Confidence 3466678888999999885433332222 222210 01011223454433 34566788899999887642 2
Q ss_pred CCCCcccccC---CCCCCCCCCCcccccc-eeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecC-
Q 043412 80 AWYPPLFDTL---PCPPTPGYGDFMAVIG-RTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQ- 154 (383)
Q Consensus 80 ~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~n- 154 (383)
.|. .++... .++.+ .. ...++ +......+.+......+++.|.|++-|+..++.+.++|.+ ++.+..|
T Consensus 134 lWP-nli~e~~~~~~p~~-Lv---NaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D~~Rf~~LGa~--~v~v~GNl 206 (419)
T COG1519 134 LWP-NLINELKRRGIPLV-LV---NARLSDRSFARYAKLKFLARLLFKNIDLILAQSEEDAQRFRSLGAK--PVVVTGNL 206 (419)
T ss_pred ccH-HHHHHHHHcCCCEE-EE---eeeechhhhHHHHHHHHHHHHHHHhcceeeecCHHHHHHHHhcCCc--ceEEecce
Confidence 342 232222 22222 00 00000 1110012233334445799999999999999999999987 4777777
Q ss_pred CCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC
Q 043412 155 PVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG 234 (383)
Q Consensus 155 gid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~ 234 (383)
-.|.+ ............+..+ ...+.+++..+. ....-+.++++++++++++||..++++-..
T Consensus 207 Kfd~~----~~~~~~~~~~~~r~~l-------~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRH---- 269 (419)
T COG1519 207 KFDIE----PPPQLAAELAALRRQL-------GGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRH---- 269 (419)
T ss_pred eecCC----CChhhHHHHHHHHHhc-------CCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCC----
Confidence 23322 1111110000112222 122677777775 333345588999999999999999999754
Q ss_pred CchHHHHHHHHhhCCCC----------------------CccccccccCceEEe-cCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 235 RDFGNKIVNFVEDSDLE----------------------KPDDGWAPAADVFVL-PSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 235 ~~~~~~~~~~~~~~~~~----------------------~~v~~~~~~adi~v~-ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
++..+.+.++++..|+. .++..+|..+|+.+. -|..+-.|..++|++++|+|||...
T Consensus 270 pERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp 349 (419)
T COG1519 270 PERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGP 349 (419)
T ss_pred hhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCC
Confidence 56778888999988775 234578899998555 4777677899999999999999987
Q ss_pred C-CCccccccC----CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Q 043412 292 W-SGPTEYLTE----ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQR 361 (383)
Q Consensus 292 ~-~g~~e~v~~----~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 361 (383)
. -...|+.+. +.++.|+ |.+.+++++..++.|++.+.+|++++...+.++
T Consensus 350 ~~~Nf~ei~~~l~~~ga~~~v~--------------------~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 350 YTFNFSDIAERLLQAGAGLQVE--------------------DADLLAKAVELLLADEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred ccccHHHHHHHHHhcCCeEEEC--------------------CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 6 344444443 3444444 788888888888889999999999999877653
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.4e-14 Score=129.43 Aligned_cols=245 Identities=17% Similarity=0.189 Sum_probs=137.1
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCC-ccccCCcc---cccc--CCCCCC-CCcEEE
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPI-DLASIGKP---VLGL--SNMNTS-SKEFVF 193 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~-~~~~~~~~---~l~~--~~~~~~-~~~~~i 193 (383)
...||.+.++|+-++..... ++-.++ .|+|||++.+.+.....-.. ....+++. .-++ ..++.+ ++.+.|
T Consensus 219 A~~AdvFTTVSeITa~Ea~~LL~r~pD--vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ 296 (633)
T PF05693_consen 219 AHYADVFTTVSEITAKEAEHLLKRKPD--VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYF 296 (633)
T ss_dssp HHHSSEEEESSHHHHHHHHHHHSS--S--EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEE
T ss_pred HHhcCeeeehhhhHHHHHHHHhCCCCC--EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEE
Confidence 57799999999999999988 555433 68899999987765432110 00000000 0000 112223 567888
Q ss_pred EEeeccc-cccCHHHHHHHHHHHhcc----CCC---eEEEEEeCCCCCC--C-----chHHHHHHHHhh-----------
Q 043412 194 LSVFKWE-YRKGWDVLLKAYLEEFSK----ADG---VVLYLLTNPYHSG--R-----DFGNKIVNFVED----------- 247 (383)
Q Consensus 194 ~~~g~~~-~~K~~~~ll~a~~~l~~~----~~~---~~l~i~G~~~~~~--~-----~~~~~~~~~~~~----------- 247 (383)
...||.+ ..||+|.+|+|+.+|... ..+ +-|+++-.....- + ...+++++-+..
T Consensus 297 ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~ 376 (633)
T PF05693_consen 297 FTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFE 376 (633)
T ss_dssp EEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899987 579999999999888532 223 3344443221100 0 000111111100
Q ss_pred ----CCCC--------------------------------------------------------Ccc-------------
Q 043412 248 ----SDLE--------------------------------------------------------KPD------------- 254 (383)
Q Consensus 248 ----~~~~--------------------------------------------------------~~v------------- 254 (383)
..+. ++|
T Consensus 377 ~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~d 456 (633)
T PF05693_consen 377 SCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTD 456 (633)
T ss_dssp HHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTS
T ss_pred HHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCC
Confidence 0110 111
Q ss_pred -------ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccC
Q 043412 255 -------DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAE 327 (383)
Q Consensus 255 -------~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~ 327 (383)
..++..||+.|+||++|+||.+.+|+.++|+|.|+|+..|...++.+..+ +. ...|+.+-.
T Consensus 457 gif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~---~~---------~~~GV~Vvd 524 (633)
T PF05693_consen 457 GIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIE---DP---------EEYGVYVVD 524 (633)
T ss_dssp SSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS----HH---------GGGTEEEE-
T ss_pred CCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhc---cC---------cCCcEEEEe
Confidence 24449999999999999999999999999999999999988776664211 00 011222221
Q ss_pred C---C----HHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 328 P---S----VDKLRALMRLVVS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 328 ~---~----~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
+ + .+++++.|.++.. +.+.+..+..++.+ +.+..+|+.+...|.+.|..++++
T Consensus 525 R~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~-LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 525 RRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAER-LSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHH-HGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHh
Confidence 1 3 4555566655555 55666667677665 678999999999999999988765
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.1e-12 Score=109.64 Aligned_cols=282 Identities=15% Similarity=0.145 Sum_probs=183.1
Q ss_pred hhhcCCCccEEEecCCCCCC--CCcccc-cC-CCCCCCCCCCcccc--cceeeeecCCC---CHHHHHh-cCCCCEEEEe
Q 043412 62 NTECRTNETVVICHSEPGAW--YPPLFD-TL-PCPPTPGYGDFMAV--IGRTMFETDRV---SPEHVKR-CNRMDFVWVP 131 (383)
Q Consensus 62 ~~~~~~~pDiV~~~~~~~~~--~~~~~~-~~-~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~-~~~ad~vi~~ 131 (383)
.++-...+|++...+++... ..+.+. .. .++.+..++++.+. .+...-....+ ..+..+. -+.||.=+|+
T Consensus 97 aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLcV 176 (444)
T KOG2941|consen 97 ALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLCV 176 (444)
T ss_pred HHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcccccchhh
Confidence 34456789999999887622 222222 11 12222233333332 11100001111 1112222 3789999999
Q ss_pred ChHHHHHHHh-cCCCCCCeEEecCCCc-----CC----CCCCCC----------CCCCccc---cCCccccccCCCCCCC
Q 043412 132 TDFHVSTFIR-SGVDPAKVVKIVQPVH-----VG----FFDPVN----------CDPIDLA---SIGKPVLGLSNMNTSS 188 (383)
Q Consensus 132 s~~~~~~~~~-~~~~~~~i~vi~ngid-----~~----~~~~~~----------~~~~~~~---~~~~~~l~~~~~~~~~ 188 (383)
++.+++.+.+ .|+. +..|++.--. .+ .|.+.. ....... ...+..-|+ ..-.++
T Consensus 177 T~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~-v~~~~~ 253 (444)
T KOG2941|consen 177 TKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGD-VQLLPE 253 (444)
T ss_pred HHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccch-hhhccC
Confidence 9999988887 8864 4555553111 11 111111 1100000 001111010 011245
Q ss_pred CcEEEEEeeccccccCHHHHHHHHHHH----hc---cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC----------
Q 043412 189 KEFVFLSVFKWEYRKGWDVLLKAYLEE----FS---KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---------- 251 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~~~~ll~a~~~l----~~---~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---------- 251 (383)
...++++...+++..++..+++|+... .. ..|.+-++|.|.| +..+.+.+.+++.+++
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG-----PlkE~Y~~~I~~~~~~~v~~~tpWL~ 328 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG-----PLKEKYSQEIHEKNLQHVQVCTPWLE 328 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC-----chhHHHHHHHHHhcccceeeeecccc
Confidence 567778888899999999999999732 11 1578888888888 7788888999998876
Q ss_pred -CccccccccCceEEec--CC-CCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCccccc
Q 043412 252 -KPDDGWAPAADVFVLP--SR-GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWA 326 (383)
Q Consensus 252 -~~v~~~~~~adi~v~p--s~-~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~ 326 (383)
++.+.+++.||+.|+- |. .--.|++++.-..||+||++-+.....|+++++ ||++++
T Consensus 329 aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~------------------ 390 (444)
T KOG2941|consen 329 AEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE------------------ 390 (444)
T ss_pred cccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec------------------
Confidence 6778889999987754 32 345799999999999999999999999999996 999998
Q ss_pred CCCHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 327 EPSVDKLRALMRLVVS----NVDEAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 327 ~~~~~~la~~i~~ll~----~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
|.+++++.+..+++ |.+...++.+++++. +...|+...++...
T Consensus 391 --Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 391 --DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTAL 437 (444)
T ss_pred --cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhhh
Confidence 99999999999999 788899999998884 66788776665543
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-12 Score=119.69 Aligned_cols=179 Identities=9% Similarity=0.061 Sum_probs=130.5
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~ 201 (383)
..+.|.||+.++..++.+.+..-+..++.++|-|+=.. ...... ...+ +++++.
T Consensus 237 ~~~~~~iIv~T~~q~~di~~r~~~~~~~~~ip~g~i~~---~~~~~r------------------~~~~--~l~~t~--- 290 (438)
T TIGR02919 237 ETRNKKIIIPNKNEYEKIKELLDNEYQEQISQLGYLYP---FKKDNK------------------YRKQ--ALILTN--- 290 (438)
T ss_pred ccccCeEEeCCHHHHHHHHHHhCcccCceEEEEEEEEe---eccccC------------------Cccc--EEEECC---
Confidence 47899999999988887776322346788888886421 111110 1122 444441
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-------CCCC-ccccccccCceEEecCCCCCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-------DLEK-PDDGWAPAADVFVLPSRGEGW 273 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-------~~~~-~v~~~~~~adi~v~ps~~e~~ 273 (383)
+..++++..+.++.|+++|.| |.+. +....+.++ .++ ++.. ++..+|..||+++.+|..|++
T Consensus 291 ----s~~I~~i~~Lv~~lPd~~f~I-ga~t----e~s~kL~~L-~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~ 360 (438)
T TIGR02919 291 ----SDQIEHLEEIVQALPDYHFHI-AALT----EMSSKLMSL-DKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEI 360 (438)
T ss_pred ----HHHHHHHHHHHHhCCCcEEEE-EecC----cccHHHHHH-HhcCCcEEECCcChHHHHHHHHhccEEEEccccccH
Confidence 888999999999999999999 7653 333566555 333 3233 778999999999999999999
Q ss_pred ChHHHHHHHcCCCEEEcCCC-CccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHH
Q 043412 274 GRPLVEAMSMGLPVIATNWS-GPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGK 352 (383)
Q Consensus 274 ~~~~~Ea~a~G~PvI~~~~~-g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~ 352 (383)
++++.||+..|+||++.+.. +..+++.+ |.+++.+ ++++|+++|.+++.|++..+..-.
T Consensus 361 ~~al~eA~~~G~pI~afd~t~~~~~~i~~--g~l~~~~------------------~~~~m~~~i~~lL~d~~~~~~~~~ 420 (438)
T TIGR02919 361 LNAVRRAFEYNLLILGFEETAHNRDFIAS--ENIFEHN------------------EVDQLISKLKDLLNDPNQFRELLE 420 (438)
T ss_pred HHHHHHHHHcCCcEEEEecccCCcccccC--CceecCC------------------CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99999999999999999985 44455555 6667666 999999999999999977655444
Q ss_pred HHHH
Q 043412 353 QARE 356 (383)
Q Consensus 353 ~a~~ 356 (383)
.-++
T Consensus 421 ~q~~ 424 (438)
T TIGR02919 421 QQRE 424 (438)
T ss_pred HHHH
Confidence 4333
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.5e-13 Score=123.56 Aligned_cols=282 Identities=12% Similarity=0.061 Sum_probs=184.5
Q ss_pred ccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cC
Q 043412 69 ETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SG 143 (383)
Q Consensus 69 pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~ 143 (383)
-|+|-+|+......+..+.........++.-....-...++..-++.....+.+-.+|.|-..+....+.|.+ .|
T Consensus 124 ~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg 203 (474)
T PRK10117 124 DDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTR 203 (474)
T ss_pred CCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcC
Confidence 3799999766545454444332211101110111111223333445666777788999999999998887664 12
Q ss_pred CC------------CCCeEEecCCCcCCCCCCCCCCCCccc-cCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHH
Q 043412 144 VD------------PAKVVKIVQPVHVGFFDPVNCDPIDLA-SIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLK 210 (383)
Q Consensus 144 ~~------------~~~i~vi~ngid~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~ 210 (383)
.. .-++.+.|-|||++.|........... ..-+..+ .++.+|+.+.|++..||+..=++
T Consensus 204 ~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~--------~~~~lilgVDRLDytKGi~~rl~ 275 (474)
T PRK10117 204 VTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAEL--------KNVQNIFSVERLDYSKGLPERFL 275 (474)
T ss_pred CcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHc--------CCCeEEEEecccccccCHHHHHH
Confidence 11 123566788999887754322111000 0001111 35778999999999999999999
Q ss_pred HHHHHhccCCC----eEEEEEeCCCCCCCch----HHHHHHHHhhCCCC------------------CccccccccCceE
Q 043412 211 AYLEEFSKADG----VVLYLLTNPYHSGRDF----GNKIVNFVEDSDLE------------------KPDDGWAPAADVF 264 (383)
Q Consensus 211 a~~~l~~~~~~----~~l~i~G~~~~~~~~~----~~~~~~~~~~~~~~------------------~~v~~~~~~adi~ 264 (383)
|+.++++++|+ +.|+-+...+..+.+. ..++.+.+...+-. +++..+|+.||++
T Consensus 276 Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~ 355 (474)
T PRK10117 276 AYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVG 355 (474)
T ss_pred HHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEE
Confidence 99999999875 5676665543333222 23344444332111 3345888999999
Q ss_pred EecCCCCCCChHHHHHHHcCC-----CEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGL-----PVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~-----PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
+.++..+|+.++..|+.+|-. .+|.|...|..+.+. ..++|+|- |.++++++|.+
T Consensus 356 lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~--~AllVNP~------------------d~~~~A~Ai~~ 415 (474)
T PRK10117 356 LVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--SALIVNPY------------------DRDEVAAALDR 415 (474)
T ss_pred EecccccccccccchheeeecCCCCccEEEecccchHHHhC--CCeEECCC------------------CHHHHHHHHHH
Confidence 999999999999999999965 388888888877774 25555554 99999999999
Q ss_pred HhcC-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 340 VVSN-VDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 340 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
.++- ++++++.-+..++. ...++...+++.+.+-+.++.
T Consensus 416 AL~Mp~~Er~~R~~~l~~~-v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 416 ALTMPLAERISRHAEMLDV-IVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HHcCCHHHHHHHHHHHHHH-hhhCCHHHHHHHHHHHHHHhh
Confidence 9994 45565555666665 567899999999998887653
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.5e-12 Score=124.73 Aligned_cols=185 Identities=16% Similarity=0.076 Sum_probs=139.1
Q ss_pred CCCCcEEEEEeeccccccCHHHHHHHHHHHhcc----CCCeEEEEEeCCCCCCCc---hHHHHHHHHhhCCCCCcc----
Q 043412 186 TSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSK----ADGVVLYLLTNPYHSGRD---FGNKIVNFVEDSDLEKPD---- 254 (383)
Q Consensus 186 ~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~----~~~~~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~v---- 254 (383)
++++.++++++.|+..+|+.++++..+.++.+- ..+++|+++|.+.+.+.. +...+.++.+...+.+++
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle 553 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLE 553 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEc
Confidence 567889999999999999999999988777541 136999999998654332 223444444433343343
Q ss_pred -------ccccccCceEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccc
Q 043412 255 -------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFW 325 (383)
Q Consensus 255 -------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~ 325 (383)
..+++.||+.++||+ .|++|++-|-||..|.+.+++-.|...|..+..||+.+..... .. ....-
T Consensus 554 ~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~~g~nGwaig~~~~---~~---~~~~~ 627 (778)
T cd04299 554 DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGYDGENGWAIGDGDE---YE---DDEYQ 627 (778)
T ss_pred CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCccccccCCCCceEeCCCcc---cc---Chhhc
Confidence 366699999999999 9999999999999999999999999999986679999976310 00 01112
Q ss_pred cCCCHHHHHHHHHHHhc----C------HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 326 AEPSVDKLRALMRLVVS----N------VDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 326 ~~~~~~~la~~i~~ll~----~------~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+..|.++|.+.|++-+. + |+.+.+|.+++...+...|||++++++|.+-+-
T Consensus 628 d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 628 DAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred chhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 23378888888865333 2 677889999998877779999999999987653
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.6e-11 Score=109.42 Aligned_cols=252 Identities=15% Similarity=0.084 Sum_probs=145.4
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCC-HHHHHhcCCCCEEEEeC
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVS-PEHVKRCNRMDFVWVPT 132 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ad~vi~~s 132 (383)
.....+..+++++++||+|++.....+. +..+....+... . ..++.+... ..+....+.++.|.+.-
T Consensus 77 ~~~~~~a~~il~~~kPd~vig~Ggyvs~-P~~~Aa~~~~iP------v-----~ihEqn~~~G~ank~~~~~a~~V~~~f 144 (357)
T COG0707 77 LKGVLQARKILKKLKPDVVIGTGGYVSG-PVGIAAKLLGIP------V-----IIHEQNAVPGLANKILSKFAKKVASAF 144 (357)
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCcccc-HHHHHHHhCCCC------E-----EEEecCCCcchhHHHhHHhhceeeecc
Confidence 3445666778899999999998655433 223333322222 1 112222222 22233345677776654
Q ss_pred hHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHH
Q 043412 133 DFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAY 212 (383)
Q Consensus 133 ~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~ 212 (383)
+. ...+.+++++.+..|++..+... ......... ...++++++.+|.-. |...+-+++
T Consensus 145 ~~-----~~~~~~~~~~~~tG~Pvr~~~~~-~~~~~~~~~-------------~~~~~~~ilV~GGS~---Ga~~ln~~v 202 (357)
T COG0707 145 PK-----LEAGVKPENVVVTGIPVRPEFEE-LPAAEVRKD-------------GRLDKKTILVTGGSQ---GAKALNDLV 202 (357)
T ss_pred cc-----ccccCCCCceEEecCcccHHhhc-cchhhhhhh-------------ccCCCcEEEEECCcc---hhHHHHHHH
Confidence 43 23445666899999999877664 221111100 011455555555432 333333333
Q ss_pred HHHhccCC-CeEEEEEeCCCCCCCchHHHHHHHHhhC------CCCCccccccccCceEEecCCCCCCChHHHHHHHcCC
Q 043412 213 LEEFSKAD-GVVLYLLTNPYHSGRDFGNKIVNFVEDS------DLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGL 285 (383)
Q Consensus 213 ~~l~~~~~-~~~l~i~G~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~ 285 (383)
........ +++++..++. ...+++......+ .+.+++..+|+.||++++=+ .++++.|..++|+
T Consensus 203 ~~~~~~l~~~~~v~~~~G~-----~~~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADLvIsRa----Ga~Ti~E~~a~g~ 273 (357)
T COG0707 203 PEALAKLANRIQVIHQTGK-----NDLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRA----GALTIAELLALGV 273 (357)
T ss_pred HHHHHHhhhCeEEEEEcCc-----chHHHHHHHHhhcCcEEEeeHHhhHHHHHHhccEEEeCC----cccHHHHHHHhCC
Confidence 33322222 5777666653 2244444444433 45688999999999999544 5789999999999
Q ss_pred CEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCC--CHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 286 PVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEP--SVDKLRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 286 PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~--~~~~la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
|+|.-+.+...+--+..|.-.+. +.+.|..+... +++.+.+.|.+++++++..++|.+++++.
T Consensus 274 P~IliP~p~~~~~~Q~~NA~~l~---------~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~ 338 (357)
T COG0707 274 PAILVPYPPGADGHQEYNAKFLE---------KAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKL 338 (357)
T ss_pred CEEEeCCCCCccchHHHHHHHHH---------hCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 99988875442222111221111 11234444444 59999999999999999999999998764
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.6e-13 Score=124.52 Aligned_cols=282 Identities=16% Similarity=0.151 Sum_probs=159.2
Q ss_pred CccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----c
Q 043412 68 NETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----S 142 (383)
Q Consensus 68 ~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~ 142 (383)
.-|+|.+|+..-...+.++.........++.-....-...++..-++...+.+.+-.||.|-..+...++.|.. +
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~l 220 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLL 220 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHc
Confidence 45799999766555555444432221101100000011223333445666777789999999999999887653 2
Q ss_pred CC--CC-----------CCeEEecCCCcCCCCCCCCCCCCc--cccCCccccccCCCCCCCCcEEEEEeeccccccCHHH
Q 043412 143 GV--DP-----------AKVVKIVQPVHVGFFDPVNCDPID--LASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDV 207 (383)
Q Consensus 143 ~~--~~-----------~~i~vi~ngid~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ 207 (383)
|. .. -++.+.|-|||++.+......... ....-+..+ ..+..+|+.+.|++..||+..
T Consensus 221 g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~-------~~~~~ii~gvDrld~~kGi~~ 293 (474)
T PF00982_consen 221 GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKF-------KGKRKIIVGVDRLDYTKGIPE 293 (474)
T ss_dssp -EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHT-------TT-SEEEEEE--B-GGG-HHH
T ss_pred CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhc-------CCCcEEEEEeccchhhcCHHH
Confidence 22 11 236677889998776432111110 000011111 123589999999999999999
Q ss_pred HHHHHHHHhccCCC----eEEEEEeCCCCCCCc----hHHHHHHHHhhC----CCC--------------CccccccccC
Q 043412 208 LLKAYLEEFSKADG----VVLYLLTNPYHSGRD----FGNKIVNFVEDS----DLE--------------KPDDGWAPAA 261 (383)
Q Consensus 208 ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~----~~~~~~~~~~~~----~~~--------------~~v~~~~~~a 261 (383)
=+.|+.++++++|+ +.|+-++.....+.+ +..++.+++... |-. ++...+|+.|
T Consensus 294 kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~a 373 (474)
T PF00982_consen 294 KLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAA 373 (474)
T ss_dssp HHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-
T ss_pred HHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhh
Confidence 99999999998775 677766665443333 234444444332 211 3345888999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCC----EEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLP----VIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~P----vI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
|+++.+|..+|+.++..|+.+|..+ +|.|...|..+.+.++ .+ ++.|.|.+++|++|
T Consensus 374 Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~-al------------------~VNP~d~~~~A~ai 434 (474)
T PF00982_consen 374 DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA-AL------------------LVNPWDIEEVADAI 434 (474)
T ss_dssp SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS--E------------------EE-TT-HHHHHHHH
T ss_pred hhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc-cE------------------EECCCChHHHHHHH
Confidence 9999999999999999999999775 7888888887776542 24 44455999999999
Q ss_pred HHHhc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 338 RLVVS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 338 ~~ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
.+.++ .+++++..-+..++. ...++...+++.+.+-++
T Consensus 435 ~~AL~M~~~Er~~r~~~~~~~-v~~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 435 HEALTMPPEERKERHARLREY-VREHDVQWWAESFLRDLK 473 (474)
T ss_dssp HHHHT--HHHHHHHHHHHHHH-HHHT-HHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH-hHhCCHHHHHHHHHHHhh
Confidence 99999 455666666666665 467899999998887664
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.2e-11 Score=111.56 Aligned_cols=206 Identities=17% Similarity=0.143 Sum_probs=129.7
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc--
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW-- 199 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~-- 199 (383)
-+.|+.+++..+...+.+.+.|+ ++.++.|++-....... .. ++. ++...+++..|+-
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~~g~---k~~~vGnPv~d~l~~~~-~~----------~l~------~~~~~lllLpGSR~a 217 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRRQGV---RASYLGNPMMDGLEPPE-RK----------PLL------TGRFRIALLPGSRPP 217 (396)
T ss_pred chhhCEEeCCCHHHHHHHHHCCC---eEEEeCcCHHhcCcccc-cc----------ccC------CCCCEEEEECCCCHH
Confidence 47899999999999999998876 89999998743322111 10 110 1234455555543
Q ss_pred ccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-----------------------CCcccc
Q 043412 200 EYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-----------------------EKPDDG 256 (383)
Q Consensus 200 ~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~v~~ 256 (383)
+..+++..+++++..+.++ +++++++...+. ...+.+++.....++ .+++..
T Consensus 218 e~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~----~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 292 (396)
T TIGR03492 218 EAYRNLKLLLRALEALPDS-QPFVFLAAIVPS----LSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAE 292 (396)
T ss_pred HHHccHHHHHHHHHHHhhC-CCeEEEEEeCCC----CCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHH
Confidence 2346788999999999766 788887765331 223445444443332 135567
Q ss_pred ccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc---ccccCCCceeeecccccccccCCCCcccccCCCHHHH
Q 043412 257 WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT---EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKL 333 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~---e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 333 (383)
+++.||++|..| |.+..|++++|+|+|.....+.. .+...... + .+.+..+.+.+++.+
T Consensus 293 ~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~-l------------~g~~~~l~~~~~~~l 354 (396)
T TIGR03492 293 ILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR-L------------LGGSVFLASKNPEQA 354 (396)
T ss_pred HHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh-h------------cCCEEecCCCCHHHH
Confidence 889999999886 56679999999999998854321 11111000 0 001222333478999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 334 RALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 334 a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
++++.++++|++.+++|.+++++........+.+++.
T Consensus 355 ~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~ 391 (396)
T TIGR03492 355 AQVVRQLLADPELLERCRRNGQERMGPPGASARIAES 391 (396)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 9999999999998888886544433333344444433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.7e-11 Score=112.74 Aligned_cols=280 Identities=14% Similarity=0.124 Sum_probs=182.8
Q ss_pred cEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cC-
Q 043412 70 TVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SG- 143 (383)
Q Consensus 70 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~- 143 (383)
|+|.+|+.....++..++........++..........++..-++...+.+.+-.||.|-..++..++.|.. .+
T Consensus 149 DiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~ 228 (486)
T COG0380 149 DIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGV 228 (486)
T ss_pred CEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccc
Confidence 899999765544444444333222101100000011122222334555666688999999999999887653 11
Q ss_pred ------------CCCCCeEEecCCCcCCCCCCCCCCCCc-cccC-CccccccCCCCCCCCcEEEEEeeccccccCHHHHH
Q 043412 144 ------------VDPAKVVKIVQPVHVGFFDPVNCDPID-LASI-GKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLL 209 (383)
Q Consensus 144 ------------~~~~~i~vi~ngid~~~~~~~~~~~~~-~~~~-~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll 209 (383)
-...++..+|-|+|+..|......... .... -+..+ ..+..+|+.+-|++..||+..=+
T Consensus 229 ~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~-------~~~~kiivgvDRlDy~kGi~~rl 301 (486)
T COG0380 229 TGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAEL-------GRNKKLIVGVDRLDYSKGIPQRL 301 (486)
T ss_pred cccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHh-------cCCceEEEEehhcccccCcHHHH
Confidence 011356678889999877654332211 1100 11111 24488999999999999999999
Q ss_pred HHHHHHhccCCC----eEEEEEeCCCCCCCc----hHHHHHHHHhhC----CCC--------------CccccccccCce
Q 043412 210 KAYLEEFSKADG----VVLYLLTNPYHSGRD----FGNKIVNFVEDS----DLE--------------KPDDGWAPAADV 263 (383)
Q Consensus 210 ~a~~~l~~~~~~----~~l~i~G~~~~~~~~----~~~~~~~~~~~~----~~~--------------~~v~~~~~~adi 263 (383)
.|+.+|+.++|. +.++-++..+..+.+ +..++++.+... |-. +++..+|+.||+
T Consensus 302 ~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv 381 (486)
T COG0380 302 LAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADV 381 (486)
T ss_pred HHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhce
Confidence 999999988874 667777766554433 233344443332 111 344688899999
Q ss_pred EEecCCCCCCChHHHHHHHc----CCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSM----GLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~----G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
++.++..+|+.++..|+.+| +-|.|.|...|....+.+ .++|+|- |.++++++|.+
T Consensus 382 ~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~--AliVNP~------------------d~~~va~ai~~ 441 (486)
T COG0380 382 MLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD--ALIVNPW------------------DTKEVADAIKR 441 (486)
T ss_pred eeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc--CEeECCC------------------ChHHHHHHHHH
Confidence 99999999999999999998 347888888777776654 5555554 99999999999
Q ss_pred Hhc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 340 VVS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 340 ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
.|+ .++++++.-+..++. ...++...++..+.+-+..
T Consensus 442 AL~m~~eEr~~r~~~~~~~-v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 442 ALTMSLEERKERHEKLLKQ-VLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HhcCCHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHh
Confidence 998 455555555555554 4678999999998776654
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.34 E-value=7e-12 Score=124.95 Aligned_cols=283 Identities=12% Similarity=0.073 Sum_probs=179.1
Q ss_pred cEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHh-----cCC
Q 043412 70 TVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-----SGV 144 (383)
Q Consensus 70 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~~ 144 (383)
|+|.+|..+....+.+++........++.-....-...++..-++...+.+.+-.||.|-..+...++.|.+ .|.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl 282 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGL 282 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCC
Confidence 899999876655555544332111101111111111223333456677777789999999999999887764 232
Q ss_pred C---------------CCCeEEecCCCcCCCCCCCCCCCCccccC--CccccccCCCCCCCCcEEEEEeeccccccCHHH
Q 043412 145 D---------------PAKVVKIVQPVHVGFFDPVNCDPIDLASI--GKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDV 207 (383)
Q Consensus 145 ~---------------~~~i~vi~ngid~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ 207 (383)
. .-++.+.|-|||...|............. -+..++ .+++.+|+.+.|++..||+..
T Consensus 283 ~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~ilgVDrlD~~KGi~~ 356 (854)
T PLN02205 283 SYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFC------DQDRIMLLGVDDMDIFKGISL 356 (854)
T ss_pred cccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhc------cCCCEEEEEccCcccccCHHH
Confidence 1 11355778899988775432221110000 011121 135789999999999999999
Q ss_pred HHHHHHHHhccCCCe----EEEEEeCCCCCCCchH----HHHHHHHhhC----C---CC-----------CccccccccC
Q 043412 208 LLKAYLEEFSKADGV----VLYLLTNPYHSGRDFG----NKIVNFVEDS----D---LE-----------KPDDGWAPAA 261 (383)
Q Consensus 208 ll~a~~~l~~~~~~~----~l~i~G~~~~~~~~~~----~~~~~~~~~~----~---~~-----------~~v~~~~~~a 261 (383)
=+.|+.++++++|+. .|+-+........+.. .++.+.+... | .. ++...+|+.|
T Consensus 357 kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A 436 (854)
T PLN02205 357 KLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA 436 (854)
T ss_pred HHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc
Confidence 999999999998864 5666655433222222 3333333332 1 11 3345889999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCC-------------------EEEcCCCCccccccCCCceeeecccccccccCCCCc
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLP-------------------VIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKG 322 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~P-------------------vI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g 322 (383)
|+++.++..+|+.++..|+.+|... +|.|...|....+. . +
T Consensus 437 Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~--~------------------A 496 (854)
T PLN02205 437 ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS--G------------------A 496 (854)
T ss_pred cEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC--c------------------C
Confidence 9999999999999999999998642 44454444444332 1 3
Q ss_pred ccccCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 323 HFWAEPSVDKLRALMRLVVSN-VDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 323 ~~~~~~~~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
+++.|.|.++++++|.+.++- +++++..-+..+++ ..+++...+++.+.+-++++.
T Consensus 497 i~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~-v~~~d~~~W~~~fl~~l~~~~ 553 (854)
T PLN02205 497 IRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRY-VSTHDVGYWARSFLQDLERTC 553 (854)
T ss_pred eEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HhhCCHHHHHHHHHHHHHHHH
Confidence 455566999999999999994 44444444555555 467899999999888877664
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.6e-11 Score=109.59 Aligned_cols=263 Identities=12% Similarity=0.016 Sum_probs=134.8
Q ss_pred HHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHH-hcCCCCEEEEeChH
Q 043412 56 LAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK-RCNRMDFVWVPTDF 134 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ad~vi~~s~~ 134 (383)
...+..+++++++||+||++....+....+...+...+. + +++.+.......+ ..+.++.+++.-+.
T Consensus 79 ~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~-----~-------i~e~n~~~g~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 79 GVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPV-----L-------LHESDMTPGLANKIALRFASKIFVTFEE 146 (352)
T ss_pred HHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCE-----E-------EECCCCCccHHHHHHHHhhCEEEEEccc
Confidence 344566788999999999986443222222222222222 1 1111112222222 24678888876543
Q ss_pred HHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHH-HHHHHH
Q 043412 135 HVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDV-LLKAYL 213 (383)
Q Consensus 135 ~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~-ll~a~~ 213 (383)
..+ +++++++.++.+++..+....... .....+++ ++++++++.+|.-...+.+.. +.+++.
T Consensus 147 ~~~-----~~~~~k~~~tG~Pvr~~~~~~~~~-----~~~~~~~l-------~~~~~~iLv~GGS~Ga~~in~~~~~~l~ 209 (352)
T PRK12446 147 AAK-----HLPKEKVIYTGSPVREEVLKGNRE-----KGLAFLGF-------SRKKPVITIMGGSLGAKKINETVREALP 209 (352)
T ss_pred hhh-----hCCCCCeEEECCcCCcccccccch-----HHHHhcCC-------CCCCcEEEEECCccchHHHHHHHHHHHH
Confidence 332 234468899999987654322111 00112222 345555555554333344433 333444
Q ss_pred HHhccCCCeEEEEEeCCCCCCCchHHHHHHH--HhhCCCC-CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEc
Q 043412 214 EEFSKADGVVLYLLTNPYHSGRDFGNKIVNF--VEDSDLE-KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 214 ~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~--~~~~~~~-~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
.+. .+++++...+.. ...+..... ....++. +++..+|+.||++|.- +.++++.|++++|+|.|..
T Consensus 210 ~l~---~~~~vv~~~G~~----~~~~~~~~~~~~~~~~f~~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~i 278 (352)
T PRK12446 210 ELL---LKYQIVHLCGKG----NLDDSLQNKEGYRQFEYVHGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLI 278 (352)
T ss_pred hhc---cCcEEEEEeCCc----hHHHHHhhcCCcEEecchhhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEE
Confidence 442 246666554431 222222111 1122443 6788999999999844 3578999999999999988
Q ss_pred CCCCccc-cccCCCc-eeeecccccccccCCCCccccc--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHH
Q 043412 291 NWSGPTE-YLTEENG-YPLLVGRMSEVTEGPFKGHFWA--EPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366 (383)
Q Consensus 291 ~~~g~~e-~v~~~~g-~~~~~~~~~~~~~~~~~g~~~~--~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~ 366 (383)
+...... --+..|. ++.+. +.|..+. ..+++.+.+++.++++|++.+++ ++ +.+....
T Consensus 279 P~~~~~~~~~Q~~Na~~l~~~----------g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~---~~-----~~~~~~~ 340 (352)
T PRK12446 279 PLSKFASRGDQILNAESFERQ----------GYASVLYEEDVTVNSLIKHVEELSHNNEKYKT---AL-----KKYNGKE 340 (352)
T ss_pred cCCCCCCCchHHHHHHHHHHC----------CCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH---HH-----HHcCCCC
Confidence 6532110 0000111 11110 1222222 22789999999999998876532 22 2233445
Q ss_pred HHHHHHHHHH
Q 043412 367 VAGIVTDHIK 376 (383)
Q Consensus 367 ~~~~~~~~~~ 376 (383)
.++++.+.+.
T Consensus 341 aa~~i~~~i~ 350 (352)
T PRK12446 341 AIQTIIDHIS 350 (352)
T ss_pred HHHHHHHHHH
Confidence 5555555443
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-12 Score=106.36 Aligned_cols=151 Identities=14% Similarity=0.100 Sum_probs=83.6
Q ss_pred CCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccch----------hhcCCChhhhhHHHHHHhhhcCCCccEE
Q 043412 3 PFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQ----------FWEGLPHHMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 3 p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~pDiV 72 (383)
.+...||.++++.+++++|.++|+...+ .+...++..... ...............+.+.+++.+||+|
T Consensus 7 ~~~~~GG~e~~~~~l~~~l~~~G~~v~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~DiV 84 (177)
T PF13439_consen 7 FLPNIGGAERVVLNLARALAKRGHEVTV--VSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPDIV 84 (177)
T ss_dssp -TTSSSHHHHHHHHHHHHHHHTT-EEEE--EESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-SEE
T ss_pred cCCCCChHHHHHHHHHHHHHHCCCEEEE--EEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCCeE
Confidence 3567899999999999999999987654 333333322111 0111122344455678888888999999
Q ss_pred EecCCCCCCCCcccccCCCCCCCCCCCcccccceee----eecCCCC-HH-----HHHhcCCCCEEEEeChHHHHHHHhc
Q 043412 73 ICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTM----FETDRVS-PE-----HVKRCNRMDFVWVPTDFHVSTFIRS 142 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~-----~~~~~~~ad~vi~~s~~~~~~~~~~ 142 (383)
|+|.....+....... ..+.+ ...++.+. +...... .. +....+.+|.++++|+..++.+.++
T Consensus 85 h~~~~~~~~~~~~~~~-~~~~v------~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~~ 157 (177)
T PF13439_consen 85 HIHGPPAFWIALLACR-KVPIV------YTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIKF 157 (177)
T ss_dssp ECCTTHCCCHHHHHHH-CSCEE------EEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHHH
T ss_pred EecccchhHHHHHhcc-CCCEE------EEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHHh
Confidence 9997554333222111 22222 22222220 1111111 11 1122588999999999999999999
Q ss_pred CCCCCCeEEecCCCcCCCCC
Q 043412 143 GVDPAKVVKIVQPVHVGFFD 162 (383)
Q Consensus 143 ~~~~~~i~vi~ngid~~~~~ 162 (383)
|++++++.|||||+|.+.|.
T Consensus 158 ~~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 158 GIPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp T--SS-EEE----B-CCCH-
T ss_pred CCcccCCEEEECCccHHHcC
Confidence 99999999999999998763
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.7e-11 Score=108.53 Aligned_cols=307 Identities=16% Similarity=0.141 Sum_probs=177.2
Q ss_pred hHHHHHHHHHHHhcccCCCceeeeecCCCc---------ccch------hhcCCC--hhhhhHHHHHHhhhcCCCccEEE
Q 043412 11 SSESWSYILALNEHVKNPRFKLAIEHHGDL---------QSLQ------FWEGLP--HHMRNLAVELYNTECRTNETVVI 73 (383)
Q Consensus 11 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~---------~~~~------~~~~~~--~~~~~~~~~l~~~~~~~~pDiV~ 73 (383)
..++-+++++|+++.....+ .+++ |+. .+.. +++.++ ...++...++.+.+...+||+|+
T Consensus 11 D~~ga~Li~~Lk~~~p~~~~-~GvG--G~~M~~~G~~~l~d~~~lsvmG~~Evl~~l~~~~~~~~~~~~~~~~~~pd~vI 87 (373)
T PF02684_consen 11 DLHGARLIRALKARDPDIEF-YGVG--GPRMQAAGVESLFDMEELSVMGFVEVLKKLPKLKRLFRKLVERIKEEKPDVVI 87 (373)
T ss_pred HHHHHHHHHHHHhhCCCcEE-EEEe--chHHHhCCCceecchHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 45788999999988653332 2222 111 1110 111111 13344556667777889999999
Q ss_pred ecCCCCCCCC--cccccCCCCCCCCCCCcccccce--eeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCe
Q 043412 74 CHSEPGAWYP--PLFDTLPCPPTPGYGDFMAVIGR--TMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKV 149 (383)
Q Consensus 74 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i 149 (383)
.-+.++..+. ..++....+.. ..+++.- |.|... +..+.-+.+|.+++.-++..+.+.+.|+ ++
T Consensus 88 lID~pgFNlrlak~lk~~~~~~~-----viyYI~PqvWAWr~~----R~~~i~~~~D~ll~ifPFE~~~y~~~g~---~~ 155 (373)
T PF02684_consen 88 LIDYPGFNLRLAKKLKKRGIPIK-----VIYYISPQVWAWRPG----RAKKIKKYVDHLLVIFPFEPEFYKKHGV---PV 155 (373)
T ss_pred EeCCCCccHHHHHHHHHhCCCce-----EEEEECCceeeeCcc----HHHHHHHHHhheeECCcccHHHHhccCC---Ce
Confidence 9887663221 11112221111 2333333 333322 2333346689999999999999999986 68
Q ss_pred EEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec-ccc-ccCHHHHHHHHHHHhccCCCeEEEEE
Q 043412 150 VKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK-WEY-RKGWDVLLKAYLEEFSKADGVVLYLL 227 (383)
Q Consensus 150 ~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~-~~~-~K~~~~ll~a~~~l~~~~~~~~l~i~ 227 (383)
..++|++=. ...+... ....+... +. +++..+.+..|+ -.+ .+.+..+++++.++.+++|++++++.
T Consensus 156 ~~VGHPl~d-~~~~~~~---~~~~~~~~-l~------~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp 224 (373)
T PF02684_consen 156 TYVGHPLLD-EVKPEPD---RAEAREKL-LD------PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVP 224 (373)
T ss_pred EEECCcchh-hhccCCC---HHHHHHhc-CC------CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 899997522 1112111 11111122 22 345556666663 333 45668889999999999999999988
Q ss_pred eCCCCCCCchHHHHHHHHhhCCCC-------CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC-CCccccc
Q 043412 228 TNPYHSGRDFGNKIVNFVEDSDLE-------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW-SGPTEYL 299 (383)
Q Consensus 228 G~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~-~g~~e~v 299 (383)
... ....+.+.+.....+.. ++-...++.||+.+..| |++.+|++.+|+|.|+..- +.....+
T Consensus 225 ~a~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~i 295 (373)
T PF02684_consen 225 VAP----EVHEELIEEILAEYPPDVSIVIIEGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFI 295 (373)
T ss_pred cCC----HHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHH
Confidence 754 12223344444443321 34567889999999877 8999999999999777654 3332222
Q ss_pred cCCCceeeecccccccccCC-CCcc-cccCCCHHHHHHHHHHHhcCHHHHHHHHHH
Q 043412 300 TEENGYPLLVGRMSEVTEGP-FKGH-FWAEPSVDKLRALMRLVVSNVDEAKAKGKQ 353 (383)
Q Consensus 300 ~~~~g~~~~~~~~~~~~~~~-~~g~-~~~~~~~~~la~~i~~ll~~~~~~~~~~~~ 353 (383)
... -+-++.-.+||+.-+. .-.. +-+..+++.+++++..+++|++.++.....
T Consensus 296 ak~-lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~~~~~ 350 (373)
T PF02684_consen 296 AKR-LVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEKRKKQKEL 350 (373)
T ss_pred HHH-hhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 211 0111222244444333 1122 222339999999999999999875444333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.9e-10 Score=98.71 Aligned_cols=313 Identities=15% Similarity=0.145 Sum_probs=192.5
Q ss_pred HHHHHHHhcccCCCceeeeecCCCcccc-hhhc--C----------------CChhhhhHHHHHHhhhcCCCccEEEecC
Q 043412 16 SYILALNEHVKNPRFKLAIEHHGDLQSL-QFWE--G----------------LPHHMRNLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 16 ~l~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~--~----------------~~~~~~~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
-+++++.+++..+.+.+..++|.+.+-. .+.+ + +.....+.+..+.+++.+.+||+|.+|.
T Consensus 21 pli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~~~~~tl~~~t~~~i~~~~~vl~~~kPD~VlVhG 100 (383)
T COG0381 21 PLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIMKPGQTLGEITGNIIEGLSKVLEEEKPDLVLVHG 100 (383)
T ss_pred HHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhccccCCCHHHHHHHHHHHHHHHHHhhCCCEEEEeC
Confidence 4678888887666666777777642111 1111 1 1122344567788889999999999998
Q ss_pred CCCCCCC-cccccCCCCCCCCCCCcccc-cceeeeecCCCCHHHHHhc--CCCCEEEEeChHHHHHHHhcCCCCCCeEEe
Q 043412 77 EPGAWYP-PLFDTLPCPPTPGYGDFMAV-IGRTMFETDRVSPEHVKRC--NRMDFVWVPTDFHVSTFIRSGVDPAKVVKI 152 (383)
Q Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi 152 (383)
...+-++ ++.+.....++ .+. -|...+.. .++....+.+ .-+|.-+++++..++.+.+-|.++++|.++
T Consensus 101 DT~t~lA~alaa~~~~IpV------~HvEAGlRt~~~-~~PEE~NR~l~~~~S~~hfapte~ar~nLl~EG~~~~~Ifvt 173 (383)
T COG0381 101 DTNTTLAGALAAFYLKIPV------GHVEAGLRTGDL-YFPEEINRRLTSHLSDLHFAPTEIARKNLLREGVPEKRIFVT 173 (383)
T ss_pred CcchHHHHHHHHHHhCCce------EEEecccccCCC-CCcHHHHHHHHHHhhhhhcCChHHHHHHHHHcCCCccceEEe
Confidence 7654333 22222111111 111 11111111 1466555553 558888999999999999999999999999
Q ss_pred cCCC-cCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccc-cCHHHHHHHHHHHhccCCCeEEEEEeCC
Q 043412 153 VQPV-HVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYR-KGWDVLLKAYLEEFSKADGVVLYLLTNP 230 (383)
Q Consensus 153 ~ngi-d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~-K~~~~ll~a~~~l~~~~~~~~l~i~G~~ 230 (383)
+|.+ |.-........ ........+ ++ ..+++.+++..-|-+.. +++..+++++.++..+++++.++.---.
T Consensus 174 Gnt~iDal~~~~~~~~-~~~~~~~~~-~~-----~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~ 246 (383)
T COG0381 174 GNTVIDALLNTRDRVL-EDSKILAKG-LD-----DKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHP 246 (383)
T ss_pred CChHHHHHHHHHhhhc-cchhhHHhh-hc-----cccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCC
Confidence 9964 32111100000 000000000 11 23345666665555433 8899999999999999988888876533
Q ss_pred CCCCCchHHHHHHHH-hhCCCCC-----------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC-CCccc
Q 043412 231 YHSGRDFGNKIVNFV-EDSDLEK-----------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW-SGPTE 297 (383)
Q Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~-----------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~-~g~~e 297 (383)
. ..+++.. ..++-.+ +...++..|-+++--| |...=||-..|+||++-.. ..-+|
T Consensus 247 ---~----~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~Pvl~lR~~TERPE 314 (383)
T COG0381 247 ---R----PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKPVLVLRDTTERPE 314 (383)
T ss_pred ---C----hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCcEEeeccCCCCcc
Confidence 1 2333332 2333222 2235557775555333 5567899999999998866 56777
Q ss_pred cccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 298 YLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 298 ~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
.++.+.-.++.. +.+.+.+++.+++++++.+++|+.. ...|.-....+++.+++..
T Consensus 315 ~v~agt~~lvg~-------------------~~~~i~~~~~~ll~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 315 GVEAGTNILVGT-------------------DEENILDAATELLEDEEFYERMSNA-----KNPYGDGNASERIVEILLN 370 (383)
T ss_pred ceecCceEEeCc-------------------cHHHHHHHHHHHhhChHHHHHHhcc-----cCCCcCcchHHHHHHHHHH
Confidence 777666666654 7899999999999999999988764 4566666677777777664
Q ss_pred H
Q 043412 378 I 378 (383)
Q Consensus 378 ~ 378 (383)
-
T Consensus 371 ~ 371 (383)
T COG0381 371 Y 371 (383)
T ss_pred H
Confidence 3
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.13 E-value=5e-10 Score=98.94 Aligned_cols=267 Identities=14% Similarity=0.059 Sum_probs=159.4
Q ss_pred hHHHHHHhhhcCCCccEEEecCCCCCCCCcc-cccCCCCCCCCCCCcccccc--eeeeecCCCCHHHHHhcCCCCEEEEe
Q 043412 55 NLAVELYNTECRTNETVVICHSEPGAWYPPL-FDTLPCPPTPGYGDFMAVIG--RTMFETDRVSPEHVKRCNRMDFVWVP 131 (383)
Q Consensus 55 ~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ad~vi~~ 131 (383)
+...++.+.+...+||++++-+.++..+.-. ......+.. +. .+++. -|.|...+ .....+.+|.+++.
T Consensus 72 k~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i---~i-ihYV~PsVWAWr~~R----a~~i~~~~D~lLai 143 (381)
T COG0763 72 KIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKI---KI-IHYVSPSVWAWRPKR----AVKIAKYVDHLLAI 143 (381)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCC---Ce-EEEECcceeeechhh----HHHHHHHhhHeeee
Confidence 3445555666688999999998766332111 111112111 11 22222 34444322 34446789999999
Q ss_pred ChHHHHHHHhcCCCCCCeEEecCCCcCC-CCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec-ccc-ccCHHHH
Q 043412 132 TDFHVSTFIRSGVDPAKVVKIVQPVHVG-FFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK-WEY-RKGWDVL 208 (383)
Q Consensus 132 s~~~~~~~~~~~~~~~~i~vi~ngid~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~-~~~-~K~~~~l 208 (383)
-++..+.+.++|.+ ++.|+|+.-.. .+.+.+.. .+.++++. .+.+.+.+..|+ -.+ .+....+
T Consensus 144 lPFE~~~y~k~g~~---~~yVGHpl~d~i~~~~~r~~-----ar~~l~~~------~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 144 LPFEPAFYDKFGLP---CTYVGHPLADEIPLLPDREA-----AREKLGID------ADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred cCCCHHHHHhcCCC---eEEeCChhhhhccccccHHH-----HHHHhCCC------CCCCeEEEecCCcHHHHHHHHHHH
Confidence 99999999999874 78888875322 12222211 12333332 455666666663 222 4567888
Q ss_pred HHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHH-HHHhhCC--CC-----CccccccccCceEEecCCCCCCChHHHHH
Q 043412 209 LKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIV-NFVEDSD--LE-----KPDDGWAPAADVFVLPSRGEGWGRPLVEA 280 (383)
Q Consensus 209 l~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~-~~~~~~~--~~-----~~v~~~~~~adi~v~ps~~e~~~~~~~Ea 280 (383)
.+++.++..++|+.++++--.. ...+.+. +...... .. .+-...+..||+.+..| |++.+|+
T Consensus 210 ~~a~~~l~~~~~~~~~vlp~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~ 279 (381)
T COG0763 210 VQAAQELKARYPDLKFVLPLVN-----AKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS-----GTATLEA 279 (381)
T ss_pred HHHHHHHHhhCCCceEEEecCc-----HHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc-----cHHHHHH
Confidence 9999999999999999998754 2223332 2222222 11 23356789999988777 8999999
Q ss_pred HHcCCCEEEcCCC-CccccccCCCceeeecccccccccCCCCc--ccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 281 MSMGLPVIATNWS-GPTEYLTEENGYPLLVGRMSEVTEGPFKG--HFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 281 ~a~G~PvI~~~~~-g~~e~v~~~~g~~~~~~~~~~~~~~~~~g--~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
+.+|+|.|++--. ...-.+-. .-+.++.-.+||+.-+..-. .+-+...++.+++++..++.|...+.++.+..
T Consensus 280 aL~g~P~Vv~Yk~~~it~~iak-~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~ 355 (381)
T COG0763 280 ALAGTPMVVAYKVKPITYFIAK-RLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKF 355 (381)
T ss_pred HHhCCCEEEEEeccHHHHHHHH-HhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHH
Confidence 9999998887543 33322222 11222223355555443111 12223489999999999999996555554443
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.2e-09 Score=96.04 Aligned_cols=175 Identities=14% Similarity=0.122 Sum_probs=114.5
Q ss_pred CCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-Ccc--------
Q 043412 184 MNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-KPD-------- 254 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~v-------- 254 (383)
++++++.++|+++.+ ..|--+..++++.+++++.|+.+|++...+. ...+.+.+.+...|+. +++
T Consensus 279 ~gLp~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~----~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~ 352 (468)
T PF13844_consen 279 YGLPEDAVVFGSFNN--LFKISPETLDLWARILKAVPNSRLWLLRFPA----SGEARLRRRFAAHGVDPDRIIFSPVAPR 352 (468)
T ss_dssp GT--SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEEEEEEETST----THHHHHHHHHHHTTS-GGGEEEEE---H
T ss_pred cCCCCCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcEEEEeeCCH----HHHHHHHHHHHHcCCChhhEEEcCCCCH
Confidence 446899999999886 4577889999999999999999998886542 3457788888899987 222
Q ss_pred ---ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHH
Q 043412 255 ---DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVD 331 (383)
Q Consensus 255 ---~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 331 (383)
...++.+|+++-|..+ +.+.+.+||+++|+|||+-....+..=+. .+++-..+ +++ +-..|.+
T Consensus 353 ~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~--aSiL~~lG-l~E----------lIA~s~~ 418 (468)
T PF13844_consen 353 EEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVG--ASILRALG-LPE----------LIADSEE 418 (468)
T ss_dssp HHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHH--HHHHHHHT--GG----------GB-SSHH
T ss_pred HHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHH--HHHHHHcC-Cch----------hcCCCHH
Confidence 2456889999987544 34789999999999999987543322211 01111000 111 1112899
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHH
Q 043412 332 KLRALMRLVVSNVDEAKAKGKQAREDMIQ--RFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 332 ~la~~i~~ll~~~~~~~~~~~~a~~~~~~--~~s~~~~~~~~~~~~~~~ 378 (383)
++.+...++.+|++.++++...-++...+ -|+-..+++.+++.|+++
T Consensus 419 eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 419 EYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999998888776543 599999999999999876
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.6e-09 Score=99.14 Aligned_cols=271 Identities=14% Similarity=0.122 Sum_probs=155.5
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCC--cccccCCCCCCCCCCCcccccce--eeeecCCCCHHHHHhcCCCCEEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYP--PLFDTLPCPPTPGYGDFMAVIGR--TMFETDRVSPEHVKRCNRMDFVW 129 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ad~vi 129 (383)
.+...++.+.+++++||++++-+.++..+. ...+.... ..+ ..++..- |.|... +..+.-+.+|.++
T Consensus 296 ~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi----~ip-viyYVsPqVWAWR~~----Rikki~k~vD~ll 366 (608)
T PRK01021 296 WYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGY----KGK-IVHYVCPSIWAWRPK----RKTILEKYLDLLL 366 (608)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCC----CCC-EEEEECccceeeCcc----hHHHHHHHhhhhe
Confidence 445566777778899999999877663321 11112211 001 1233333 334322 3334446789999
Q ss_pred EeChHHHHHHHhcCCCCCCeEEecCCC-cCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec-ccc-ccCHH
Q 043412 130 VPTDFHVSTFIRSGVDPAKVVKIVQPV-HVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK-WEY-RKGWD 206 (383)
Q Consensus 130 ~~s~~~~~~~~~~~~~~~~i~vi~ngi-d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~-~~~-~K~~~ 206 (383)
+.-++..+.+++.|+ +++.++|+. |. ...... ....+.+.++. +++..+-+..|+ -.+ .+...
T Consensus 367 ~IfPFE~~~y~~~gv---~v~yVGHPL~d~--i~~~~~---~~~~r~~lgl~------~~~~iIaLLPGSR~~EI~rllP 432 (608)
T PRK01021 367 LILPFEQNLFKDSPL---RTVYLGHPLVET--ISSFSP---NLSWKEQLHLP------SDKPIVAAFPGSRRGDILRNLT 432 (608)
T ss_pred ecCccCHHHHHhcCC---CeEEECCcHHhh--cccCCC---HHHHHHHcCCC------CCCCEEEEECCCCHHHHHHHHH
Confidence 999999999999887 688999986 32 111111 11112222321 244566677773 323 45678
Q ss_pred HHHHHHH--HHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-----C-C-ccccccccCceEEecCCCCCCChHH
Q 043412 207 VLLKAYL--EEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-----E-K-PDDGWAPAADVFVLPSRGEGWGRPL 277 (383)
Q Consensus 207 ~ll~a~~--~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-----~-~-~v~~~~~~adi~v~ps~~e~~~~~~ 277 (383)
.+++|++ .+. ++.++++.... ....+.+++.++..+. . + +-..+++.||+.+..| |.+.
T Consensus 433 v~l~aa~~~~l~---~~l~fvvp~a~----~~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~aLaaS-----GTaT 500 (608)
T PRK01021 433 IQVQAFLASSLA---STHQLLVSSAN----PKYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDCALAKC-----GTIV 500 (608)
T ss_pred HHHHHHHHHHhc---cCeEEEEecCc----hhhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCeeeecC-----CHHH
Confidence 8888887 443 25777775432 1234556665544332 1 2 2367889999999887 8999
Q ss_pred HHHHHcCCCEEEcCC-CCccccccCC-CceeeecccccccccCC-CCcccc---cCCCHHHHHHHHHHHhcCHHHHHHHH
Q 043412 278 VEAMSMGLPVIATNW-SGPTEYLTEE-NGYPLLVGRMSEVTEGP-FKGHFW---AEPSVDKLRALMRLVVSNVDEAKAKG 351 (383)
Q Consensus 278 ~Ea~a~G~PvI~~~~-~g~~e~v~~~-~g~~~~~~~~~~~~~~~-~~g~~~---~~~~~~~la~~i~~ll~~~~~~~~~~ 351 (383)
+|++.+|+|.|+.-- +.....+... -...++.-.+||+.-+. .--.+. ++.+++.+++++ +++.|++.++++.
T Consensus 501 LEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~ 579 (608)
T PRK01021 501 LETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQK 579 (608)
T ss_pred HHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHH
Confidence 999999999877644 3333322211 00001222234444332 112222 234899999996 8888988777776
Q ss_pred HHHHHHHHhc
Q 043412 352 KQAREDMIQR 361 (383)
Q Consensus 352 ~~a~~~~~~~ 361 (383)
+.-.+ +.+.
T Consensus 580 ~~l~~-lr~~ 588 (608)
T PRK01021 580 DACRD-LYQA 588 (608)
T ss_pred HHHHH-HHHH
Confidence 66544 3443
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.6e-07 Score=85.29 Aligned_cols=178 Identities=13% Similarity=0.103 Sum_probs=125.0
Q ss_pred CCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-Cc-----------
Q 043412 186 TSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-KP----------- 253 (383)
Q Consensus 186 ~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~----------- 253 (383)
++++.++|+++++ ..|-...+++.+.++.+..|+=.|++.|+| .+++....+++++++.|+. ++
T Consensus 426 lp~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~--~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~ 501 (620)
T COG3914 426 LPEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGG--DDAEINARLRDLAEREGVDSERLRFLPPAPNED 501 (620)
T ss_pred CCCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCC--CcHHHHHHHHHHHHHcCCChhheeecCCCCCHH
Confidence 5788899888886 668788889999999999999999999987 4567789999999999986 22
Q ss_pred cccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHH
Q 043412 254 DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKL 333 (383)
Q Consensus 254 v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 333 (383)
-...|..||+++-+.-+ +...+..||+.+|+||++-.......-+ ++-++..-.+|+..-+ +.++.
T Consensus 502 h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~---~~si~~~agi~e~vA~----------s~~dY 567 (620)
T COG3914 502 HRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRN---GASIATNAGIPELVAD----------SRADY 567 (620)
T ss_pred HHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhh---hHHHHHhcCCchhhcC----------CHHHH
Confidence 24667999999976544 3467899999999999987542111100 0101110011111111 67777
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHhc
Q 043412 334 RALMRLVVSNVDEAKAKGKQAREDMIQ--RFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 334 a~~i~~ll~~~~~~~~~~~~a~~~~~~--~~s~~~~~~~~~~~~~~~~~~ 381 (383)
.+.-..+-.|...+++....-+..... -|+.+.+++++..+|.++.++
T Consensus 568 V~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 568 VEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 777777777776666655444333233 699999999999999988754
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.7e-11 Score=96.87 Aligned_cols=140 Identities=19% Similarity=0.128 Sum_probs=71.3
Q ss_pred CChhHHHHHHHHHHHhcccCCCceeeeecCCCcccch-----hhcC--C-----ChhhhhHHHHHHhhh--cCCCccEEE
Q 043412 8 GGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQ-----FWEG--L-----PHHMRNLAVELYNTE--CRTNETVVI 73 (383)
Q Consensus 8 ~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~-----~~~~--~-----~~~~~~~~~~l~~~~--~~~~pDiV~ 73 (383)
||.++++.+++++|.++|+...+ ............ .+.. + ..........+.+++ ++.+||+||
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Dvv~ 78 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTV--VTPQPDPEDDEEEEDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAARRERPDVVH 78 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEE--EEE---GGG-SEEETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHCT---SEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEE--EecCCCCcccccccCCceEEeccCCccchhhhhHHHHHHHHHHHhhhccCCeEEE
Confidence 89999999999999999986553 222222211100 0001 1 112344567788888 899999999
Q ss_pred ecCCCCCCCCcccc-cCCCCCCCCCCCcccccceeeeecCCCCH-----HHHHhcCCCCEEEEeChHHHHHHHhcCCCCC
Q 043412 74 CHSEPGAWYPPLFD-TLPCPPTPGYGDFMAVIGRTMFETDRVSP-----EHVKRCNRMDFVWVPTDFHVSTFIRSGVDPA 147 (383)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~ 147 (383)
+|+....+...+.. ....+.+ ...++........+.. .....++.||.++++|+..++.+.+++.+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~p~v------~~~h~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~~g~~~~ 152 (160)
T PF13579_consen 79 AHSPTAGLVAALARRRRGIPLV------VTVHGTLFRRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRRYGVPPD 152 (160)
T ss_dssp EEHHHHHHHHHHHHHHHT--EE------EE-SS-T------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHHH---GG
T ss_pred ecccchhHHHHHHHHccCCcEE------EEECCCchhhccchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHHhCCCCC
Confidence 99743222222222 1222322 2222221111111111 1123368899999999999999999999999
Q ss_pred CeEEecCC
Q 043412 148 KVVKIVQP 155 (383)
Q Consensus 148 ~i~vi~ng 155 (383)
++.|||||
T Consensus 153 ri~vipnG 160 (160)
T PF13579_consen 153 RIHVIPNG 160 (160)
T ss_dssp GEEE----
T ss_pred cEEEeCcC
Confidence 99999997
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=92.88 Aligned_cols=266 Identities=12% Similarity=0.105 Sum_probs=140.6
Q ss_pred hHHHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHh-c-CCCCEEEEe
Q 043412 55 NLAVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKR-C-NRMDFVWVP 131 (383)
Q Consensus 55 ~~~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ad~vi~~ 131 (383)
.....+.+++.+++||+|+++.....-++ ++.+.....++ .+..+.. +.... .....+. . +.++..+++
T Consensus 80 ~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv------~HveaG~-rs~~~-~eE~~r~~i~~la~l~f~~ 151 (365)
T TIGR03568 80 LTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPI------AHIHGGE-VTEGA-IDESIRHAITKLSHLHFVA 151 (365)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcE------EEEECCc-cCCCC-chHHHHHHHHHHHhhccCC
Confidence 34577888899999999999975532211 11111111111 1111110 00011 1222222 1 456888899
Q ss_pred ChHHHHHHHhcCCCCCCeEEecC-CCcCCCCCCCCCCCCccccCCccccccCCCCCC-CCcEEEEEeeccc--c---ccC
Q 043412 132 TDFHVSTFIRSGVDPAKVVKIVQ-PVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTS-SKEFVFLSVFKWE--Y---RKG 204 (383)
Q Consensus 132 s~~~~~~~~~~~~~~~~i~vi~n-gid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~i~~~g~~~--~---~K~ 204 (383)
++..++.+.+.|.+++++.++.| ++|.-....... ......++++ + ++.++++..-+-. . .+.
T Consensus 152 t~~~~~~L~~eg~~~~~i~~tG~~~iD~l~~~~~~~---~~~~~~~lgl-------~~~~~~vlvt~Hp~~~~~~~~~~~ 221 (365)
T TIGR03568 152 TEEYRQRVIQMGEDPDRVFNVGSPGLDNILSLDLLS---KEELEEKLGI-------DLDKPYALVTFHPVTLEKESAEEQ 221 (365)
T ss_pred CHHHHHHHHHcCCCCCcEEEECCcHHHHHHhhhccC---HHHHHHHhCC-------CCCCCEEEEEeCCCcccccCchHH
Confidence 99999999999998889999988 555432211111 1111122222 2 2345444443322 2 233
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CCC-------CccccccccCceEEecCCCCCCChH
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DLE-------KPDDGWAPAADVFVLPSRGEGWGRP 276 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~~-------~~v~~~~~~adi~v~ps~~e~~~~~ 276 (383)
+..+++++.++ ..++.+++-..+ +......+.+.++.... ++. .++..+++.|++++.-|. | .
T Consensus 222 l~~li~~L~~~---~~~~~vi~P~~~-p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSS----g-g 292 (365)
T TIGR03568 222 IKELLKALDEL---NKNYIFTYPNAD-AGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSS----S-G 292 (365)
T ss_pred HHHHHHHHHHh---ccCCEEEEeCCC-CCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcCh----h-H
Confidence 44555555443 224433221111 11222344455543211 111 334578899999995442 2 3
Q ss_pred HHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043412 277 LVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAR 355 (383)
Q Consensus 277 ~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~ 355 (383)
+.||.++|+|+|+- +..+|.+..+ |.+++.. |++++.+++.++ .+++.+..+..
T Consensus 293 i~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~vg~-------------------~~~~I~~a~~~~-~~~~~~~~~~~--- 347 (365)
T TIGR03568 293 IIEAPSFGVPTINI--GTRQKGRLRADSVIDVDP-------------------DKEEIVKAIEKL-LDPAFKKSLKN--- 347 (365)
T ss_pred HHhhhhcCCCEEee--cCCchhhhhcCeEEEeCC-------------------CHHHHHHHHHHH-hChHHHHHHhh---
Confidence 38999999999954 4566666654 4454543 899999999995 44443333211
Q ss_pred HHHHhcCCHHHHHHHHHHH
Q 043412 356 EDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 356 ~~~~~~~s~~~~~~~~~~~ 374 (383)
....|...+.++++.++
T Consensus 348 --~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 348 --VKNPYGDGNSSERIIEI 364 (365)
T ss_pred --CCCCCCCChHHHHHHHh
Confidence 23456666677776654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.83 E-value=3.4e-07 Score=80.76 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=145.7
Q ss_pred cCCCCEEEEeChHH-HHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc
Q 043412 122 CNRMDFVWVPTDFH-VSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW 199 (383)
Q Consensus 122 ~~~ad~vi~~s~~~-~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~ 199 (383)
+.-.|.|++.++.. ++.+.+ .+. .++..++.++|.+.+.+.++... -.--+.++|+.
T Consensus 136 l~~fd~v~~~g~~l~~~~yyq~~~~--~~~~~~~~a~d~~~~~~i~~da~-------------------~~~dL~~ign~ 194 (373)
T COG4641 136 LFIFDNVLSFGGGLVANKYYQEGGA--RNCYYLPWAVDDSLFHPIPPDAS-------------------YDVDLNLIGNP 194 (373)
T ss_pred cchhhhhhhccchHHHHHHHHhhcc--cceeccCccCCchhcccCCcccc-------------------ceeeeEEecCC
Confidence 34456677777766 666664 433 37889999999999988764321 12347777865
Q ss_pred ccccCHHHHHHHHHHHhcc-----CCCeEEEEEeCCCCCC--CchHHHHHHHHhhCCCCCccccccccCceEEecCCC--
Q 043412 200 EYRKGWDVLLKAYLEEFSK-----ADGVVLYLLTNPYHSG--RDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRG-- 270 (383)
Q Consensus 200 ~~~K~~~~ll~a~~~l~~~-----~~~~~l~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~-- 270 (383)
.+. ..+.++++..+ .-+-++.+.|...+.+ ......-.+.+..+...+.+...++..|+.+.-++.
T Consensus 195 ~pD-----r~e~~ke~~~~ps~kl~v~rr~~~~g~~y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~ 269 (373)
T COG4641 195 YPD-----RVEEIKEFFVEPSFKLMVDRRFYVLGPRYPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASI 269 (373)
T ss_pred Ccc-----HHHHHHHHhhccchhhhccceeeecCCccchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHH
Confidence 443 23333332221 1134566666552211 111122334555555556677788888887766542
Q ss_pred -CC---CChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHH
Q 043412 271 -EG---WGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDE 346 (383)
Q Consensus 271 -e~---~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~ 346 (383)
++ +.+-+.|+++||.|.|++...+...++.++.-+++-. |..++.+.++.++..++.
T Consensus 270 ~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~-------------------d~kdl~~~~~yll~h~~e 330 (373)
T COG4641 270 ANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ-------------------DSKDLKEKLKYLLNHPDE 330 (373)
T ss_pred HhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec-------------------CHHHHHHHHHHHhcCcch
Confidence 22 3788999999999999999998888888865544442 899999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 347 AKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 347 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
++++++.+.+.+...|+.+.-+..+.+....+
T Consensus 331 rkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 331 RKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999999999999988877777653
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.77 E-value=5e-09 Score=95.12 Aligned_cols=275 Identities=11% Similarity=0.106 Sum_probs=149.8
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccce-eeeec-CCCCHHHHHhc--CCCCEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGR-TMFET-DRVSPEHVKRC--NRMDFV 128 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~--~~ad~v 128 (383)
...+..+.+++.+++||+|+++......++ ++.+.....++ .+..+- ..++. ........+.+ +-||.-
T Consensus 53 ~~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ipv------~HieaGlRs~d~~~g~~de~~R~~i~~la~lh 126 (346)
T PF02350_consen 53 GLAIIELADVLEREKPDAVLVLGDRNEALAAALAAFYLNIPV------AHIEAGLRSGDRTEGMPDEINRHAIDKLAHLH 126 (346)
T ss_dssp HHHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-EE------EEES-----S-TTSSTTHHHHHHHHHHH-SEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhCCCE------EEecCCCCccccCCCCchhhhhhhhhhhhhhh
Confidence 445667778888999999999976542222 11111111111 122221 11111 13455555543 669999
Q ss_pred EEeChHHHHHHHhcCCCCCCeEEecC-CCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc---ccC
Q 043412 129 WVPTDFHVSTFIRSGVDPAKVVKIVQ-PVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY---RKG 204 (383)
Q Consensus 129 i~~s~~~~~~~~~~~~~~~~i~vi~n-gid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~---~K~ 204 (383)
+++++..++.+.+.|.++++|.++.| ++|.-.......... . ....+. ...++++++++.=+.+. ...
T Consensus 127 f~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~-~---~~~~i~----~~~~~~~iLvt~H~~t~~~~~~~ 198 (346)
T PF02350_consen 127 FAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEK-Y---KNSGIL----QDAPKPYILVTLHPVTNEDNPER 198 (346)
T ss_dssp EESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC--H---HHHHHH----HCTTSEEEEEE-S-CCCCTHH--
T ss_pred ccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhh-h---hhHHHH----hccCCCEEEEEeCcchhcCChHH
Confidence 99999999999999999999999998 455432111111000 0 000110 00345566666544332 345
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC-CC-------CccccccccCceEEecCCCCCCChH
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD-LE-------KPDDGWAPAADVFVLPSRGEGWGRP 276 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~-~~-------~~v~~~~~~adi~v~ps~~e~~~~~ 276 (383)
...+.++++.+.+. +++.+++..... +.....+.+.+..+. +. .++..+++.|+++|-=| | .
T Consensus 199 ~~~i~~~l~~L~~~-~~~~vi~~~hn~---p~~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~vvgdS-----s-G 268 (346)
T PF02350_consen 199 LEQILEALKALAER-QNVPVIFPLHNN---PRGSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADLVVGDS-----S-G 268 (346)
T ss_dssp HHHHHHHHHHHHHH-TTEEEEEE--S----HHHHHHHHHHHTT-TTEEEE----HHHHHHHHHHESEEEESS-----H-H
T ss_pred HHHHHHHHHHHHhc-CCCcEEEEecCC---chHHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceEEEEcC-----c-c
Confidence 67788888888777 789999887631 244555555554441 10 33457779999998444 4 5
Q ss_pred HH-HHHHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 277 LV-EAMSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 277 ~~-Ea~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
+. ||.++|+|+|.-.. +...+....+...+++. |.+++.+++.+++.+++.+.++..
T Consensus 269 I~eEa~~lg~P~v~iR~~geRqe~r~~~~nvlv~~-------------------~~~~I~~ai~~~l~~~~~~~~~~~-- 327 (346)
T PF02350_consen 269 IQEEAPSLGKPVVNIRDSGERQEGRERGSNVLVGT-------------------DPEAIIQAIEKALSDKDFYRKLKN-- 327 (346)
T ss_dssp HHHHGGGGT--EEECSSS-S-HHHHHTTSEEEETS-------------------SHHHHHHHHHHHHH-HHHHHHHHC--
T ss_pred HHHHHHHhCCeEEEecCCCCCHHHHhhcceEEeCC-------------------CHHHHHHHHHHHHhChHHHHhhcc--
Confidence 66 99999999999844 55566666665555542 899999999999988555444322
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
....|.-...++++.++++
T Consensus 328 ---~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 328 ---RPNPYGDGNASERIVEILK 346 (346)
T ss_dssp ---S--TT-SS-HHHHHHHHHH
T ss_pred ---CCCCCCCCcHHHHHHHhhC
Confidence 1345666777777777654
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.6e-07 Score=80.85 Aligned_cols=111 Identities=20% Similarity=0.234 Sum_probs=76.4
Q ss_pred cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccccc----CC--Cc-eeeecccccccccCCCCcccccCC
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT----EE--NG-YPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~----~~--~g-~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
.+.+.|++.|+||++|+||.+..|+-.+|+|-|+|+.+|..-+.+ +. .| ++++.. +--++.
T Consensus 496 eFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRR------------fks~de 563 (692)
T KOG3742|consen 496 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRR------------FKSPDE 563 (692)
T ss_pred HHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecc------------cCChhh
Confidence 344999999999999999999999999999999999987654443 32 34 333321 111222
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 329 SVDKLRALMRLVVSNVDEAKAKGK-QAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 329 ~~~~la~~i~~ll~~~~~~~~~~~-~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
+.+++++-|.++..... ++++.+ |--++...-.+|..+...|.+.=...+
T Consensus 564 Sv~qL~~~m~~F~~qsR-RQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL 614 (692)
T KOG3742|consen 564 SVQQLASFMYEFCKQSR-RQRIIQRNRTERLSDLLDWKYLGRYYRKARHLAL 614 (692)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHH
Confidence 77888888888776443 444433 334556677899888877766544444
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-06 Score=79.31 Aligned_cols=179 Identities=11% Similarity=0.029 Sum_probs=104.5
Q ss_pred CCccEEEecCCCCCCC--CcccccCCCCCCCCCCCcccccc--eeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhc
Q 043412 67 TNETVVICHSEPGAWY--PPLFDTLPCPPTPGYGDFMAVIG--RTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRS 142 (383)
Q Consensus 67 ~~pDiV~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~ 142 (383)
.+||+++.-+.++..+ +...+.. .+ +.+. .+++. .|.|... +..+..+.+|.+++.-++..+.+
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~-~~---~i~v-iyyi~PqvWAWr~~----R~~~i~k~~d~vl~ifPFE~~~y--- 142 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKA-YP---KKEI-IYYILPQVWAWKKG----RAKILEKYCDFLASILPFEVQFY--- 142 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhc-CC---CCCE-EEEECccceeeCcc----hHHHHHHHHhhhhccCCCCHHHh---
Confidence 6999999987766332 1111111 10 1121 23333 3444332 23344467888888888777777
Q ss_pred CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc-c-ccCHHHHHHHHHHHhccCC
Q 043412 143 GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE-Y-RKGWDVLLKAYLEEFSKAD 220 (383)
Q Consensus 143 ~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~-~-~K~~~~ll~a~~~l~~~~~ 220 (383)
|. ++.+++|++-.. +.+... . + +++..+.+..|+-. + .+.+..+++++.++.++.
T Consensus 143 g~---~~~~VGhPl~d~-~~~~~~-~----------~-------~~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~- 199 (347)
T PRK14089 143 QS---KATYVGHPLLDE-IKEFKK-D----------L-------DKEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE- 199 (347)
T ss_pred CC---CCEEECCcHHHh-hhhhhh-h----------c-------CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC-
Confidence 44 567889985322 211100 0 0 12345666666432 2 345677788998887653
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhC---CCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDS---DLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
..+++.+.. .. +.+++..... .+.++...+++.||+.+..| |.+.+|++.+|+|.|...-
T Consensus 200 -~~~~i~~a~-----~~-~~i~~~~~~~~~~~~~~~~~~~m~~aDlal~~S-----GT~TLE~al~g~P~Vv~Yk 262 (347)
T PRK14089 200 -KILVVPSFF-----KG-KDLKEIYGDISEFEISYDTHKALLEAEFAFICS-----GTATLEAALIGTPFVLAYK 262 (347)
T ss_pred -cEEEEeCCC-----cH-HHHHHHHhcCCCcEEeccHHHHHHhhhHHHhcC-----cHHHHHHHHhCCCEEEEEe
Confidence 677777653 11 4444443321 22245567889999998777 7888899999999888543
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.2e-06 Score=77.35 Aligned_cols=92 Identities=16% Similarity=0.047 Sum_probs=64.1
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEE-EEeCCCCCCCchHHHHHHHHhhC------CCCCccccccccCc
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLY-LLTNPYHSGRDFGNKIVNFVEDS------DLEKPDDGWAPAAD 262 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~-i~G~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~ad 262 (383)
+.++++.|..++.+....+++++.++. +++++. ++|.+. +..+++++.+... +..+++..+|+.||
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~----~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aD 243 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSN----PNLDELKKFAKEYPNIILFIDVENMAELMNEAD 243 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCC----cCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCC
Confidence 456788887777665667777776542 344443 555542 3345666665542 33367889999999
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
+++.+ .|.++.|++++|+|+|+....
T Consensus 244 l~Is~-----~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 244 LAIGA-----AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred EEEEC-----CchHHHHHHHcCCCEEEEEec
Confidence 99974 468999999999999988763
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.4e-05 Score=71.66 Aligned_cols=223 Identities=16% Similarity=0.147 Sum_probs=115.5
Q ss_pred HHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHH
Q 043412 56 LAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFH 135 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~ 135 (383)
...++.+++++++||+++++....+...++....+.... -+..+ .. ....-.+..||.++++.-.-
T Consensus 71 R~~~l~~~~~~~~pDv~is~~s~~a~~va~~lgiP~I~f---~D~e~--a~---------~~~~Lt~Pla~~i~~P~~~~ 136 (335)
T PF04007_consen 71 RQYKLLKLIKKFKPDVAISFGSPEAARVAFGLGIPSIVF---NDTEH--AI---------AQNRLTLPLADVIITPEAIP 136 (335)
T ss_pred HHHHHHHHHHhhCCCEEEecCcHHHHHHHHHhCCCeEEE---ecCch--hh---------ccceeehhcCCeeECCcccC
Confidence 346677888899999999986544322222222221111 01000 00 00001135799999998877
Q ss_pred HHHHHhcCCCCCCeEEecCCCcCCC----CCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc--cccCH-HHH
Q 043412 136 VSTFIRSGVDPAKVVKIVQPVHVGF----FDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE--YRKGW-DVL 208 (383)
Q Consensus 136 ~~~~~~~~~~~~~i~vi~ngid~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~--~~K~~-~~l 208 (383)
.+.+.++|.. +++. -++|++... |.|... ...+++ ++++..+++=...+. ..+|- ..+
T Consensus 137 ~~~~~~~G~~-~~i~-~y~G~~E~ayl~~F~Pd~~------vl~~lg-------~~~~~yIvvR~~~~~A~y~~~~~~i~ 201 (335)
T PF04007_consen 137 KEFLKRFGAK-NQIR-TYNGYKELAYLHPFKPDPE------VLKELG-------LDDEPYIVVRPEAWKASYDNGKKSIL 201 (335)
T ss_pred HHHHHhcCCc-CCEE-EECCeeeEEeecCCCCChh------HHHHcC-------CCCCCEEEEEeccccCeeecCccchH
Confidence 7778888765 3332 267776432 333221 122222 344444443222221 11222 234
Q ss_pred HHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC--C-Ccc--ccccccCceEEecCCCCCCChHHHHHHHc
Q 043412 209 LKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL--E-KPD--DGWAPAADVFVLPSRGEGWGRPLVEAMSM 283 (383)
Q Consensus 209 l~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~--~-~~v--~~~~~~adi~v~ps~~e~~~~~~~Ea~a~ 283 (383)
-+.+.++.+. .+. ++++.... +..+ ..+..++ . +.+ ..++.-||++|. +.|....||...
T Consensus 202 ~~ii~~L~~~-~~~-vV~ipr~~----~~~~----~~~~~~~~i~~~~vd~~~Ll~~a~l~Ig-----~ggTMa~EAA~L 266 (335)
T PF04007_consen 202 PEIIEELEKY-GRN-VVIIPRYE----DQRE----LFEKYGVIIPPEPVDGLDLLYYADLVIG-----GGGTMAREAALL 266 (335)
T ss_pred HHHHHHHHhh-Cce-EEEecCCc----chhh----HHhccCccccCCCCCHHHHHHhcCEEEe-----CCcHHHHHHHHh
Confidence 4555555443 343 55554331 1111 2223332 1 323 378899999983 346889999999
Q ss_pred CCCEEEcCCCC---ccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 284 GLPVIATNWSG---PTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 284 G~PvI~~~~~g---~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
|+|+|.+..+- ..+++. +. |.++...|++++.+.+.+.+
T Consensus 267 GtPaIs~~~g~~~~vd~~L~-~~------------------Gll~~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 267 GTPAISCFPGKLLAVDKYLI-EK------------------GLLYHSTDPDEIVEYVRKNL 308 (335)
T ss_pred CCCEEEecCCcchhHHHHHH-HC------------------CCeEecCCHHHHHHHHHHhh
Confidence 99999975432 222221 22 44555559999888665543
|
They are found in archaea and some bacteria and have no known function. |
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.0003 Score=61.17 Aligned_cols=268 Identities=12% Similarity=0.074 Sum_probs=151.2
Q ss_pred HHHHHhhhcCCCccEEEecCCCC--CCCCcccccCCCCCCCCCCCcccccceeeeecC-CCCHHHH---Hh--cCCCCEE
Q 043412 57 AVELYNTECRTNETVVICHSEPG--AWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETD-RVSPEHV---KR--CNRMDFV 128 (383)
Q Consensus 57 ~~~l~~~~~~~~pDiV~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~--~~~ad~v 128 (383)
...+....+..+.+=+++|+-.. .|.+.++..+.... .+.+.+|..+++.. .++..+. ++ .++.-+|
T Consensus 28 a~avi~~a~~~r~~rff~HGqFn~~lwlall~g~~~~~q-----~yWhiWGaDLYe~~~~lk~rlfy~lRR~aq~rvg~v 102 (322)
T PRK02797 28 AEAVIAKAKANRAQRFFLHGQFNPTLWLALLSGKIKPKQ-----FYWHIWGADLYEESKGLKFRLFYPLRRLAQKRVGHV 102 (322)
T ss_pred HHHHHHHHhhCccceEEEecCCCHHHHHHHHhCCcCccc-----eEEEEEChhhhhcccchhHHHHHHHHHHHHhhcCeE
Confidence 34444445556777788886533 33333333332222 25666666665322 2222221 11 4788899
Q ss_pred EEeChHHHHHH-Hh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc-ccccCH
Q 043412 129 WVPTDFHVSTF-IR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW-EYRKGW 205 (383)
Q Consensus 129 i~~s~~~~~~~-~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~-~~~K~~ 205 (383)
++ .......+ ++ ++++ .+....|.-.+.......... . +.+++ -+.+|+. ++.-+.
T Consensus 103 ~a-trGD~~~~a~~~~~v~-~~llyfpt~m~~~l~~~~~~~----~--------------~~~~~-tIlvGNSgd~SN~H 161 (322)
T PRK02797 103 FA-TRGDLSYFAQRHPKVP-GSLLYFPTRMDPSLNTMANDR----Q--------------RAGKM-TILVGNSGDRSNRH 161 (322)
T ss_pred EE-ecchHHHHHHhcCCCC-ccEEecCCcchhhhccccccc----c--------------CCCce-EEEEeCCCCCcccH
Confidence 99 55555554 33 5554 344333433332111111100 0 12233 3444543 456667
Q ss_pred HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------------CccccccccCceEEecC-CCCC
Q 043412 206 DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPS-RGEG 272 (383)
Q Consensus 206 ~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps-~~e~ 272 (383)
..+++++.+.. ..++++++--+-+..+..|.+++.+...++--. ++...+++.||+.++-. +..|
T Consensus 162 ie~L~~l~~~~--~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQg 239 (322)
T PRK02797 162 IEALRALHQQF--GDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQG 239 (322)
T ss_pred HHHHHHHHHHh--CCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhhH
Confidence 77777776653 457888887665546678888888887776432 33357789999998875 4677
Q ss_pred CChHHHHHHHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHH
Q 043412 273 WGRPLVEAMSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKG 351 (383)
Q Consensus 273 ~~~~~~Ea~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~ 351 (383)
.|+ +.=.+.+|+||+.+.. +-..++.+.+.-++++.+.+ |...+.++ .++|.
T Consensus 240 iGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~Vlf~~d~L----------------~~~~v~e~----------~rql~ 292 (322)
T PRK02797 240 IGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLPVLFTGDDL----------------DEDIVREA----------QRQLA 292 (322)
T ss_pred HhH-HHHHHHCCCcEEEecCCchHHHHHhCCCeEEecCCcc----------------cHHHHHHH----------HHHHH
Confidence 775 4558899999888854 66666655554444443210 33333221 22334
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 352 KQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 352 ~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
...++.+. |+-++..+.|.+++..+..+
T Consensus 293 ~~dk~~I~--Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 293 SVDKNIIA--FFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred hhCcceee--ecCHhHHHHHHHHHHHhhCC
Confidence 44444333 99999999999999876654
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.5e-05 Score=71.94 Aligned_cols=100 Identities=20% Similarity=0.187 Sum_probs=64.5
Q ss_pred ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccc----ccC-CCceeeecccccccccCCCCcccccCCC
Q 043412 255 DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEY----LTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 255 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~----v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
..++..||++|..+ ...+++||+++|+|+|+....+-... +.+ +.|..+.. ...+
T Consensus 286 ~~ll~~~~~~I~hg----G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~----------------~~~~ 345 (392)
T TIGR01426 286 LEILKKADAFITHG----GMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPP----------------EEVT 345 (392)
T ss_pred HHHHhhCCEEEECC----CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEecc----------------ccCC
Confidence 36789999999544 23579999999999999876432211 111 33332221 1227
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 330 VDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 330 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
.++++++|+++++|++.++++.+-+. .+...-..+..++.+.+++
T Consensus 346 ~~~l~~ai~~~l~~~~~~~~~~~l~~-~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 346 AEKLREAVLAVLSDPRYAERLRKMRA-EIREAGGARRAADEIEGFL 390 (392)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH-HHHHcCCHHHHHHHHHHhh
Confidence 89999999999999986666544433 3455556666666665543
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.3e-05 Score=72.43 Aligned_cols=93 Identities=12% Similarity=0.047 Sum_probs=61.8
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-CccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-KPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~adi~v~ 266 (383)
++..+++++|..... .++++++. .++..+++.|.... ... ...+...++. .++..+++.||++|.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~----~~~~~~~v~g~~~~--~~~----~~ni~~~~~~~~~~~~~m~~ad~vIs 256 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKA----LPDYQFIVFGPNAA--DPR----PGNIHVRPFSTPDFAELMAAADLVIS 256 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHh----CCCCeEEEEcCCcc--ccc----CCCEEEeecChHHHHHHHHhCCEEEE
Confidence 456778888875433 55666554 46788988876521 011 2222334444 677899999999995
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCcccc
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGPTEY 298 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~ 298 (383)
.. .-.++.||+++|+|+|+-+..+..|.
T Consensus 257 ~~----G~~t~~Ea~~~g~P~l~ip~~~~~EQ 284 (318)
T PF13528_consen 257 KG----GYTTISEALALGKPALVIPRPGQDEQ 284 (318)
T ss_pred CC----CHHHHHHHHHcCCCEEEEeCCCCchH
Confidence 54 23459999999999999988654443
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00058 Score=59.00 Aligned_cols=233 Identities=14% Similarity=0.077 Sum_probs=124.0
Q ss_pred hHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChH
Q 043412 55 NLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDF 134 (383)
Q Consensus 55 ~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~ 134 (383)
.....|.+++.+++||+.+.-+.+. .+.....+..+.. .. .........-..-+..||.+++++..
T Consensus 71 eR~~~L~ki~~~~kpdv~i~~~s~~--l~rvafgLg~psI------i~------~D~ehA~~qnkl~~Pla~~ii~P~~~ 136 (346)
T COG1817 71 ERVYKLSKIIAEFKPDVAIGKHSPE--LPRVAFGLGIPSI------IF------VDNEHAEAQNKLTLPLADVIITPEAI 136 (346)
T ss_pred HHHHHHHHHHhhcCCceEeecCCcc--hhhHHhhcCCceE------Ee------cCChhHHHHhhcchhhhhheeccccc
Confidence 3446788899999999988843221 1111111222211 00 00000011111224779999999999
Q ss_pred HHHHHHhcCCCCCCeEEecCCCcC----CCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEE-eec-----cccccC
Q 043412 135 HVSTFIRSGVDPAKVVKIVQPVHV----GFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLS-VFK-----WEYRKG 204 (383)
Q Consensus 135 ~~~~~~~~~~~~~~i~vi~ngid~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~-~g~-----~~~~K~ 204 (383)
..+.+...|..+.++. -.||+-. ..|.|.+. ...+++ +.++...|++ .-. ....++
T Consensus 137 ~~~~~~~~G~~p~~i~-~~~giae~~~v~~f~pd~e------vlkeLg-------l~~~~~yIVmRpe~~~A~y~~g~~~ 202 (346)
T COG1817 137 DEEELLDFGADPNKIS-GYNGIAELANVYGFVPDPE------VLKELG-------LEEGETYIVMRPEPWGAHYDNGDRG 202 (346)
T ss_pred chHHHHHhCCCcccee-cccceeEEeecccCCCCHH------HHHHcC-------CCCCCceEEEeeccccceeeccccc
Confidence 8888888888765543 3455421 22333322 123333 3454333333 111 123556
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCcccc---ccccCceEEecCCCCCCChHHHHHH
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDG---WAPAADVFVLPSRGEGWGRPLVEAM 281 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~adi~v~ps~~e~~~~~~~Ea~ 281 (383)
.+.+.++++.+.+. + .+++-.. ...+++-+..+..-..+++.. ++--|++++ .+.|.-.-||+
T Consensus 203 ~~~~~~li~~l~k~-g---iV~ipr~-----~~~~eife~~~n~i~pk~~vD~l~Llyya~lvi-----g~ggTMarEaA 268 (346)
T COG1817 203 ISVLPDLIKELKKY-G---IVLIPRE-----KEQAEIFEGYRNIIIPKKAVDTLSLLYYATLVI-----GAGGTMAREAA 268 (346)
T ss_pred hhhHHHHHHHHHhC-c---EEEecCc-----hhHHHHHhhhccccCCcccccHHHHHhhhheee-----cCCchHHHHHH
Confidence 66777777776443 2 4444322 223333333333333344444 556667776 34467789999
Q ss_pred HcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHH
Q 043412 282 SMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVD 345 (383)
Q Consensus 282 a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~ 345 (383)
..|+|.|++.-| -.-.++. +++ ..|.++...|+.+..+...+.+.++.
T Consensus 269 lLGtpaIs~~pG-kll~vdk---~li------------e~G~~~~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 269 LLGTPAISCYPG-KLLAVDK---YLI------------EKGLLYHSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred HhCCceEEecCC-ccccccH---HHH------------hcCceeecCCHHHHHHHHHHHhhchh
Confidence 999999999843 2222222 111 13555555588888888888777664
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.6e-05 Score=72.00 Aligned_cols=92 Identities=15% Similarity=0.068 Sum_probs=55.2
Q ss_pred CcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-CccccccccCceEEec
Q 043412 189 KEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-KPDDGWAPAADVFVLP 267 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~adi~v~p 267 (383)
+..++++.|. .+...+++++.++ +++.+++ |.... . .+.+.+.+...++. +++..++..||+++.-
T Consensus 188 ~~~iLv~~g~----~~~~~l~~~l~~~----~~~~~i~-~~~~~-~---~~~~~~~v~~~~~~~~~~~~~l~~ad~vI~~ 254 (321)
T TIGR00661 188 EDYILVYIGF----EYRYKILELLGKI----ANVKFVC-YSYEV-A---KNSYNENVEIRRITTDNFKELIKNAELVITH 254 (321)
T ss_pred CCcEEEECCc----CCHHHHHHHHHhC----CCeEEEE-eCCCC-C---ccccCCCEEEEECChHHHHHHHHhCCEEEEC
Confidence 3445566554 3455666666443 5555544 43211 1 11121222223444 4788999999999966
Q ss_pred CCCCCCChHHHHHHHcCCCEEEcCCCCccc
Q 043412 268 SRGEGWGRPLVEAMSMGLPVIATNWSGPTE 297 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e 297 (383)
+ ...++.||+++|+|+|..+..+..|
T Consensus 255 ~----G~~t~~Ea~~~g~P~l~ip~~~~~e 280 (321)
T TIGR00661 255 G----GFSLISEALSLGKPLIVIPDLGQFE 280 (321)
T ss_pred C----ChHHHHHHHHcCCCEEEEcCCCccc
Confidence 5 2347999999999999998865444
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00019 Score=66.37 Aligned_cols=226 Identities=17% Similarity=0.248 Sum_probs=104.5
Q ss_pred HHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEE
Q 043412 117 EHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLS 195 (383)
Q Consensus 117 ~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~ 195 (383)
.........|.+++.|+..++.+.+ ++.+++++.+.+.+-....+...... ....... ++++.++.+|++
T Consensus 127 ~~~~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~--~~~i~~~-------~~~~~~~k~ILy 197 (369)
T PF04464_consen 127 NYKRNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKEN--RNRIKKK-------LGIDKDKKVILY 197 (369)
T ss_dssp HHHHHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-H--HHHHHHH-------TT--SS-EEEEE
T ss_pred hhhhhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHH--HHHHHHH-------hccCCCCcEEEE
Confidence 4455578899999999999999988 78887777666543221122221111 0000111 123466778888
Q ss_pred eeccccccCH------HHH--HHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhh------CCCCCccccccccC
Q 043412 196 VFKWEYRKGW------DVL--LKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVED------SDLEKPDDGWAPAA 261 (383)
Q Consensus 196 ~g~~~~~K~~------~~l--l~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~a 261 (383)
+=.+...... ... .+.+. ....+++.+++..-. ............ ..-.+++..++..|
T Consensus 198 aPT~R~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~li~k~Hp-----~~~~~~~~~~~~~~~i~~~~~~~~~~~ll~~a 270 (369)
T PF04464_consen 198 APTWRDNSSNEYFKFFFSDLDFEKLN--FLLKNNYVLIIKPHP-----NMKKKFKDFKEDNSNIIFVSDNEDIYDLLAAA 270 (369)
T ss_dssp E----GGG--GGSS----TT-HHHHH--HHHTTTEEEEE--SH-----HHHTT----TT-TTTEEE-TT-S-HHHHHHT-
T ss_pred eeccccccccccccccccccCHHHHH--HHhCCCcEEEEEeCc-----hhhhchhhhhccCCcEEECCCCCCHHHHHHhc
Confidence 7654332221 122 22222 223468888876532 111222111111 11124678899999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
|++|.= ++-++.|++.+++|||.-... ..++ ....|+..+... ..-|..+ .+.++|.++|..++
T Consensus 271 DiLITD-----ySSi~fD~~~l~KPiify~~D-~~~Y-~~~rg~~~~~~~-------~~pg~~~--~~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 271 DILITD-----YSSIIFDFLLLNKPIIFYQPD-LEEY-EKERGFYFDYEE-------DLPGPIV--YNFEELIEAIENII 334 (369)
T ss_dssp SEEEES-----S-THHHHHGGGT--EEEE-TT-TTTT-TTTSSBSS-TTT-------SSSS-EE--SSHHHHHHHHTTHH
T ss_pred CEEEEe-----chhHHHHHHHhCCCEEEEecc-HHHH-hhccCCCCchHh-------hCCCcee--CCHHHHHHHHHhhh
Confidence 999832 355899999999999955321 1222 222444444210 0111121 28999999999998
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
++++....-.++.++.+. .|.-.+..+++.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~-~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 335 ENPDEYKEKREKFRDKFF-KYNDGNSSERIVNYI 367 (369)
T ss_dssp HHHHHTHHHHHHHHHHHS-TT--S-HHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhC-CCCCchHHHHHHHHH
Confidence 876654433333333222 244445566665554
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=97.89 E-value=6.5e-05 Score=61.02 Aligned_cols=140 Identities=10% Similarity=0.018 Sum_probs=77.6
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcC-----CC--hh--------hhhHHHHHHhhhc--CCCc
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEG-----LP--HH--------MRNLAVELYNTEC--RTNE 69 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~--------~~~~~~~l~~~~~--~~~p 69 (383)
=||+++.+.+|+..|.++|+..++ .+..+........+.+ +| .. +...+.......+ +.+.
T Consensus 16 YGGfET~ve~L~~~l~~~g~~v~V--yc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~al~~~~~~~~~~ 93 (185)
T PF09314_consen 16 YGGFETFVEELAPRLVSKGIDVTV--YCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLHALRFIKQDKIKY 93 (185)
T ss_pred cCcHHHHHHHHHHHHhcCCceEEE--EEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHHHHHHHhhccccC
Confidence 499999999999999998877654 3333322111211221 11 11 1111111111222 2468
Q ss_pred cEEEecCCC-CCCCCcccccCCC---CCCCCCCCcccccceeeeecCCCCHHHHHh--------cCCCCEEEEeChHHHH
Q 043412 70 TVVICHSEP-GAWYPPLFDTLPC---PPTPGYGDFMAVIGRTMFETDRVSPEHVKR--------CNRMDFVWVPTDFHVS 137 (383)
Q Consensus 70 DiV~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ad~vi~~s~~~~~ 137 (383)
|+|+++... +.++.++...+.. +.+ ....| .-|...+|.....+. .+.+|.+|+-|+..++
T Consensus 94 ~ii~ilg~~~g~~~~~~~r~~~~~g~~v~------vN~DG-lEWkR~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~ 166 (185)
T PF09314_consen 94 DIILILGYGIGPFFLPFLRKLRKKGGKVV------VNMDG-LEWKRAKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQD 166 (185)
T ss_pred CEEEEEcCCccHHHHHHHHhhhhcCCcEE------ECCCc-chhhhhhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHH
Confidence 899998654 3333333333221 222 22222 223333443222211 5899999999999999
Q ss_pred HHHh-cCCCCCCeEEecCCCc
Q 043412 138 TFIR-SGVDPAKVVKIVQPVH 157 (383)
Q Consensus 138 ~~~~-~~~~~~~i~vi~ngid 157 (383)
.+.+ ++ ..+..+|++|.|
T Consensus 167 y~~~~y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 167 YIKERYG--RKKSTFIAYGAD 185 (185)
T ss_pred HHHHHcC--CCCcEEecCCCC
Confidence 9998 66 348899999976
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0032 Score=55.74 Aligned_cols=265 Identities=12% Similarity=0.087 Sum_probs=141.7
Q ss_pred HHHHhhhcCCCccEEEecCCCC--CCCCcccccCCCCCCCCCCCcccccceeeeecCC-CCHHHHH---h--cCCCCEEE
Q 043412 58 VELYNTECRTNETVVICHSEPG--AWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDR-VSPEHVK---R--CNRMDFVW 129 (383)
Q Consensus 58 ~~l~~~~~~~~pDiV~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~--~~~ad~vi 129 (383)
..+....+..+.+=++.|+... .|+.-++..+... ..+.+.+|..+++... ++.++.. + .++.-.|+
T Consensus 68 ~avi~~a~~~r~~kff~HGqFn~~lwlaLl~g~~~~~-----k~~WhIWGaDLYe~~~~~k~rlfy~lRr~aq~rvg~V~ 142 (360)
T PF07429_consen 68 QAVIAKAKADRADKFFLHGQFNPWLWLALLFGKIKLK-----KCYWHIWGADLYEDSRSLKFRLFYFLRRLAQKRVGHVF 142 (360)
T ss_pred HHHHHHHhhCccceEEEeccCcHHHHHHHHcCCcccc-----ceEEEEeCchhhccccccchhHHHHHHHHHHhhcCeEE
Confidence 3344445566788888886433 2322222222222 2255666666554332 2222211 1 36677777
Q ss_pred EeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc-ccccCHHH
Q 043412 130 VPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW-EYRKGWDV 207 (383)
Q Consensus 130 ~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~-~~~K~~~~ 207 (383)
+ .+.....+++ ++..+..+..-|..++........... .+++..| .+|+. ++.-+.-.
T Consensus 143 a-t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~~~------------------~~~~ltI-LvGNSgd~sNnHie 202 (360)
T PF07429_consen 143 A-TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKNKK------------------NKGKLTI-LVGNSGDPSNNHIE 202 (360)
T ss_pred E-EcchHHHHHHHcCCCCceEEEcCCCCchhhhccccccC------------------CCCceEE-EEcCCCCCCccHHH
Confidence 6 4566666666 554434444445444433211111100 1223333 44443 45556666
Q ss_pred HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------------CccccccccCceEEecCC-CCCCC
Q 043412 208 LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPSR-GEGWG 274 (383)
Q Consensus 208 ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps~-~e~~~ 274 (383)
+++++++.. ..++++++--+-+..+.+|.+++.+...++--. ++...+++.||+.++... ..|.|
T Consensus 203 aL~~L~~~~--~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiG 280 (360)
T PF07429_consen 203 ALEALKQQF--GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIG 280 (360)
T ss_pred HHHHHHHhc--CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHh
Confidence 666665532 457887665543323457788888777765222 333477799999999974 57776
Q ss_pred hHHHHHHHcCCCEEEcCCCCccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHHHHHHHHH
Q 043412 275 RPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVDEAKAKGK 352 (383)
Q Consensus 275 ~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~~~~~~~~ 352 (383)
+ +.=.+.+|+||+.+.....-..+.+ +--+++..+ +-|.+.+.++=+++.. |+.
T Consensus 281 n-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d----------------~L~~~~v~ea~rql~~~dk~------- 336 (360)
T PF07429_consen 281 N-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGD----------------ELDEALVREAQRQLANVDKQ------- 336 (360)
T ss_pred H-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccc----------------cCCHHHHHHHHHHHhhCccc-------
Confidence 4 5568999999999977555444444 333333322 1155556555554433 211
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 353 QAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 353 ~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
.-.|.-.+..+.|.+.+..+.
T Consensus 337 ------~iaFf~pny~~~w~~~l~~~~ 357 (360)
T PF07429_consen 337 ------QIAFFAPNYLQGWRQALRLAA 357 (360)
T ss_pred ------ceeeeCCchHHHHHHHHHHHh
Confidence 123555666677776665443
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00023 Score=66.60 Aligned_cols=150 Identities=17% Similarity=0.150 Sum_probs=80.2
Q ss_pred CCcEEEEEeecccc---ccCHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCCchHHHHHHHHhhCCCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWEY---RKGWDVLLKAYLEEFSKADGVVLYL-LTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~---~K~~~~ll~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi 263 (383)
++..++++.|+... .+-...+++++..+ +.++++ +|..... . ....+.+.-.+.. ....++..||+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~--~--~~~~~~v~~~~~~-p~~~ll~~~d~ 307 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLG--A--EDLPDNVRVVDFV-PHDWLLPRCAA 307 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCcccc--c--cCCCCceEEeCCC-CHHHHhhhhhe
Confidence 45678888887643 23334445555432 445444 4433111 0 0011111111221 23567889999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMR 338 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~ 338 (383)
+| ..|...++.||+++|+|+|+....+- .+.+.. +.|..++.. ..+.+++.+++.
T Consensus 308 ~I----~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~----------------~~~~~~l~~al~ 367 (401)
T cd03784 308 VV----HHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPR----------------ELTAERLAAALR 367 (401)
T ss_pred ee----ecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcc----------------cCCHHHHHHHHH
Confidence 99 44456899999999999999977542 112222 333322211 127899999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 043412 339 LVVSNVDEAKAKGKQAREDMIQRFSPETVAG 369 (383)
Q Consensus 339 ~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~ 369 (383)
++++++ .++++.+.+.+ +.+.-..+..++
T Consensus 368 ~~l~~~-~~~~~~~~~~~-~~~~~g~~~~~~ 396 (401)
T cd03784 368 RLLDPP-SRRRAAALLRR-IREEDGVPSAAD 396 (401)
T ss_pred HHhCHH-HHHHHHHHHHH-HHhccCHHHHHH
Confidence 999854 34444443333 233334444433
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.051 Score=50.98 Aligned_cols=204 Identities=12% Similarity=0.084 Sum_probs=106.9
Q ss_pred HhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCC-Cccc-cCCccccccCCCCCCCCcEEEEEee
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDP-IDLA-SIGKPVLGLSNMNTSSKEFVFLSVF 197 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~-~~~~-~~~~~~l~~~~~~~~~~~~~i~~~g 197 (383)
..++++|.|.+=-+..++.+++.|++..++.+.+..+ +.-+..... .... ....... ....+.+-+.+.
T Consensus 172 ~vl~~~~~ItvRD~~S~~~Lk~lGv~~~~v~~~aDpA---F~L~~~~~~~~~~~~~~~~~~~------~~~~~~Vgisvr 242 (426)
T PRK10017 172 YVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTA---WLVDHHTEDFTASYAVQHWLDV------AAQQKTVAITLR 242 (426)
T ss_pred HHHhcCCEEEEccHHHHHHHHHhCCCccceEEecChh---hhCCccccccccchhhhhhhcc------cccCCEEEEEec
Confidence 3479999999999999999999999877888876432 211111100 0000 0000000 011233334434
Q ss_pred ccccc-c-------CH-HHHHHHHHHHhccCCCeEEEEEeCCCC----CCCchHHHHHHHHhhCC---C-C-----Cccc
Q 043412 198 KWEYR-K-------GW-DVLLKAYLEEFSKADGVVLYLLTNPYH----SGRDFGNKIVNFVEDSD---L-E-----KPDD 255 (383)
Q Consensus 198 ~~~~~-K-------~~-~~ll~a~~~l~~~~~~~~l~i~G~~~~----~~~~~~~~~~~~~~~~~---~-~-----~~v~ 255 (383)
.+.+. + .+ ..+.+++..+.++.-++.|+-...+.. ++......+.+.+.... + . .++.
T Consensus 243 ~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~ 322 (426)
T PRK10017 243 ELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMG 322 (426)
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHH
Confidence 33311 1 12 445566777766544444443322211 11111133333332111 0 1 1234
Q ss_pred cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC-CccccccC-C-CceeeecccccccccCCCCcccccCCCHHH
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS-GPTEYLTE-E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~-g~~e~v~~-~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
.+++.||+++..-. ..++=|+++|+|+|+-... -...++.+ + ..+.++. .+.+.++
T Consensus 323 ~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~----------------~~l~~~~ 381 (426)
T PRK10017 323 KILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDI----------------RHLLDGS 381 (426)
T ss_pred HHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEech----------------hhCCHHH
Confidence 67799999885543 3688999999999998763 22333322 1 2222332 2227889
Q ss_pred HHHHHHHHhcCHHHHHHHHHH
Q 043412 333 LRALMRLVVSNVDEAKAKGKQ 353 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~ 353 (383)
+.+.+.++++|.+..++.-++
T Consensus 382 Li~~v~~~~~~r~~~~~~l~~ 402 (426)
T PRK10017 382 LQAMVADTLGQLPALNARLAE 402 (426)
T ss_pred HHHHHHHHHhCHHHHHHHHHH
Confidence 999999999988765544333
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.52 E-value=7.1e-07 Score=72.57 Aligned_cols=94 Identities=20% Similarity=0.237 Sum_probs=55.6
Q ss_pred CCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccC
Q 043412 248 SDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAE 327 (383)
Q Consensus 248 ~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~ 327 (383)
.+..+++..+++.||+++. -+.+.++.|++++|+|.|.-+..+..+--+..|...+.. .+.|..+..
T Consensus 60 ~~~~~~m~~~m~~aDlvIs----~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~---------~g~~~~~~~ 126 (167)
T PF04101_consen 60 FGFVDNMAELMAAADLVIS----HAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK---------KGAAIMLDE 126 (167)
T ss_dssp ECSSSSHHHHHHHHSEEEE----CS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH---------CCCCCCSEC
T ss_pred EechhhHHHHHHHcCEEEe----CCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH---------cCCccccCc
Confidence 4566889999999999983 345689999999999998877655221000011100000 011222222
Q ss_pred C--CHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 328 P--SVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 328 ~--~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
. +++.|.++|.+++.++.....|.+++
T Consensus 127 ~~~~~~~L~~~i~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 127 SELNPEELAEAIEELLSDPEKLKEMAKAA 155 (167)
T ss_dssp CC-SCCCHHHHHHCHCCCHH-SHHHCCCH
T ss_pred ccCCHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 2 57899999999999998777666554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0023 Score=61.54 Aligned_cols=130 Identities=15% Similarity=0.048 Sum_probs=77.1
Q ss_pred CcEEEEEeecccc-----ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCcc--------c
Q 043412 189 KEFVFLSVFKWEY-----RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPD--------D 255 (383)
Q Consensus 189 ~~~~i~~~g~~~~-----~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v--------~ 255 (383)
...+++..|.... .+-...+++|++.+ + .++++..++.. .. .++.+++ .
T Consensus 296 ~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~-----~~--------~~~p~Nv~i~~w~Pq~ 357 (507)
T PHA03392 296 NGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEV-----EA--------INLPANVLTQKWFPQR 357 (507)
T ss_pred CcEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCc-----Cc--------ccCCCceEEecCCCHH
Confidence 3588888887642 22345555565443 3 46766654311 00 0112222 2
Q ss_pred ccc--ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-cCCCceeeecccccccccCCCCcccccCC
Q 043412 256 GWA--PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYL-TEENGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 256 ~~~--~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v-~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
.++ ..++++| ..|...++.||+.+|+|+|+-+..+ ....+ ..+.|..++.. ..
T Consensus 358 ~lL~hp~v~~fI----tHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~----------------~~ 417 (507)
T PHA03392 358 AVLKHKNVKAFV----TQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTV----------------TV 417 (507)
T ss_pred HHhcCCCCCEEE----ecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccC----------------Cc
Confidence 444 3467776 4566779999999999999988742 11111 12344444322 12
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043412 329 SVDKLRALMRLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 329 ~~~~la~~i~~ll~~~~~~~~~~~~a~~ 356 (383)
+.+++.+++.++++|+..+++..+-+..
T Consensus 418 t~~~l~~ai~~vl~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 418 SAAQLVLAIVDVIENPKYRKNLKELRHL 445 (507)
T ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 8899999999999998876665554444
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.002 Score=60.10 Aligned_cols=160 Identities=20% Similarity=0.222 Sum_probs=92.0
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEec
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLP 267 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~p 267 (383)
+..+++++.|..... ..+++.+.+.... -++++++...+.. . ....+..-+...+. -....++..||+++..
T Consensus 236 d~~~vyvslGt~~~~---~~l~~~~~~a~~~-l~~~vi~~~~~~~-~--~~~~~p~n~~v~~~-~p~~~~l~~ad~vI~h 307 (406)
T COG1819 236 DRPIVYVSLGTVGNA---VELLAIVLEALAD-LDVRVIVSLGGAR-D--TLVNVPDNVIVADY-VPQLELLPRADAVIHH 307 (406)
T ss_pred CCCeEEEEcCCcccH---HHHHHHHHHHHhc-CCcEEEEeccccc-c--ccccCCCceEEecC-CCHHHHhhhcCEEEec
Confidence 456777788876443 3444443333333 3677777764311 0 00000000001111 1113578999999943
Q ss_pred CCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc
Q 043412 268 SRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~ 342 (383)
|...++.||+.+|+|+|+-..+. ..+-+++ ++|..+.. ...+.+.+++++++++.
T Consensus 308 ----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~----------------~~l~~~~l~~av~~vL~ 367 (406)
T COG1819 308 ----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPF----------------EELTEERLRAAVNEVLA 367 (406)
T ss_pred ----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCc----------------ccCCHHHHHHHHHHHhc
Confidence 45568999999999999987752 2222333 45544442 23499999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 343 NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 343 ~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
|+..++...+..+. +.+.-.....++.+.++.+
T Consensus 368 ~~~~~~~~~~~~~~-~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 368 DDSYRRAAERLAEE-FKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred CHHHHHHHHHHHHH-hhhcccHHHHHHHHHHHHh
Confidence 99876655444433 4555555555555555444
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0084 Score=56.73 Aligned_cols=171 Identities=13% Similarity=0.096 Sum_probs=119.2
Q ss_pred CCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCc-c--------
Q 043412 184 MNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKP-D-------- 254 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-v-------- 254 (383)
++++++.++|+.+..+. |=-...++.+.+++++.|+-.|.+..-.. .-...++..+...|++.+ +
T Consensus 753 y~Lp~d~vvf~~FNqLy--KidP~~l~~W~~ILk~VPnS~LwllrfPa----~ge~rf~ty~~~~Gl~p~riifs~va~k 826 (966)
T KOG4626|consen 753 YGLPEDAVVFCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPA----VGEQRFRTYAEQLGLEPDRIIFSPVAAK 826 (966)
T ss_pred CCCCCCeEEEeechhhh--cCCHHHHHHHHHHHHhCCcceeEEEeccc----cchHHHHHHHHHhCCCccceeeccccch
Confidence 34578999988887654 44456788999999999998887776542 223778888999998732 2
Q ss_pred ---ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccc------cCCCceeeecccccccccCCCCcccc
Q 043412 255 ---DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYL------TEENGYPLLVGRMSEVTEGPFKGHFW 325 (383)
Q Consensus 255 ---~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v------~~~~g~~~~~~~~~~~~~~~~~g~~~ 325 (383)
..-+..+|+.+-+....| -.+-+|.+++|+|+|+-....+..-| .-+.|-++..
T Consensus 827 ~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak---------------- 889 (966)
T KOG4626|consen 827 EEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAK---------------- 889 (966)
T ss_pred HHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhh----------------
Confidence 133477888887765443 24668999999999998764332222 1233333322
Q ss_pred cCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHh
Q 043412 326 AEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQ--RFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 326 ~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~--~~s~~~~~~~~~~~~~~~~~ 380 (383)
+.++..+.-.++-.|.+..+.+...-++.-.. -|+-..++..++++|.++.+
T Consensus 890 ---~~eEY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~ 943 (966)
T KOG4626|consen 890 ---NREEYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWK 943 (966)
T ss_pred ---hHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHH
Confidence 77888888888888988888877766653222 58889999999999987753
|
|
| >PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00054 Score=55.66 Aligned_cols=86 Identities=16% Similarity=0.098 Sum_probs=55.3
Q ss_pred HHHHHhhhcCCCccEEEecCCCCCCC-CcccccCCCC-CCC--CC-CCcccccceeeeecCCCCHHHHHhcCCCCEEEEe
Q 043412 57 AVELYNTECRTNETVVICHSEPGAWY-PPLFDTLPCP-PTP--GY-GDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVP 131 (383)
Q Consensus 57 ~~~l~~~~~~~~pDiV~~~~~~~~~~-~~~~~~~~~~-~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~ 131 (383)
..++.+++++.+||+|+|.++.++.. ...+...... ..+ ++ -++...+..|. ...+|..++.
T Consensus 78 ~~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~~W~-------------~~~~D~y~Va 144 (169)
T PF06925_consen 78 ARRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHPFWI-------------HPGVDRYFVA 144 (169)
T ss_pred HHHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCcCee-------------cCCCCEEEEC
Confidence 45678888999999999997754433 2222222211 110 11 11111122222 1579999999
Q ss_pred ChHHHHHHHhcCCCCCCeEEecCC
Q 043412 132 TDFHVSTFIRSGVDPAKVVKIVQP 155 (383)
Q Consensus 132 s~~~~~~~~~~~~~~~~i~vi~ng 155 (383)
|+..++.+.+.|+++++|.+.+-+
T Consensus 145 se~~~~~l~~~Gi~~~~I~vtGiP 168 (169)
T PF06925_consen 145 SEEVKEELIERGIPPERIHVTGIP 168 (169)
T ss_pred CHHHHHHHHHcCCChhHEEEeCcc
Confidence 999999999999999999887654
|
; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.008 Score=59.45 Aligned_cols=234 Identities=15% Similarity=0.060 Sum_probs=137.6
Q ss_pred CHHHHHhcCCCCEEEEeChHHHHHHHh-----cCC---------------CCCCeEEecCCCcCCCCCCCCCCCCccccC
Q 043412 115 SPEHVKRCNRMDFVWVPTDFHVSTFIR-----SGV---------------DPAKVVKIVQPVHVGFFDPVNCDPIDLASI 174 (383)
Q Consensus 115 ~~~~~~~~~~ad~vi~~s~~~~~~~~~-----~~~---------------~~~~i~vi~ngid~~~~~~~~~~~~~~~~~ 174 (383)
.......+..+|.+-..++..+..+.. .+. ....+..+|-|+|...+.............
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~ 266 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKG 266 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHH
Confidence 344455567777777666666654432 111 112344566677776665433221111100
Q ss_pred CccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCC----eEEEEEeCCCCCCCchHHHHHHHHh----
Q 043412 175 GKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG----VVLYLLTNPYHSGRDFGNKIVNFVE---- 246 (383)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~~~~~~~~~~~---- 246 (383)
....- ...++.+++.+-+++..||...=+.++.+++.++|+ +.++.+..+...+....++++..+.
T Consensus 267 ~ei~~------~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~ 340 (732)
T KOG1050|consen 267 MEIKE------PFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVR 340 (732)
T ss_pred HHHhh------hccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhh
Confidence 00000 013678899999999999998888899888888764 5566666554433332222322222
Q ss_pred hC----CCC--------------CccccccccCceEEecCCCCCCChHHHHHHHcC----CCEEEcCCCCccccccCCCc
Q 043412 247 DS----DLE--------------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMG----LPVIATNWSGPTEYLTEENG 304 (383)
Q Consensus 247 ~~----~~~--------------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G----~PvI~~~~~g~~e~v~~~~g 304 (383)
.. +-. .+...++..+|+.+..+..+|.+++.+|+.+|. .+.|.+...|..+..+++
T Consensus 341 rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~-- 418 (732)
T KOG1050|consen 341 RINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA-- 418 (732)
T ss_pred hhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeecccccccccc--
Confidence 11 100 233577799999999999999999999999884 677777776666665443
Q ss_pred eeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 043412 305 YPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTD 373 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 373 (383)
..++.+.+.+.++.+|..+++.++.-.++.....-......+...++....+
T Consensus 419 -----------------aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~ 470 (732)
T KOG1050|consen 419 -----------------AIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQ 470 (732)
T ss_pred -----------------CEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHH
Confidence 2344455999999999999996655444433322212234444444444444
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=97.21 E-value=9.8e-05 Score=63.87 Aligned_cols=27 Identities=30% Similarity=0.311 Sum_probs=23.3
Q ss_pred CCCCCCCCChhHHHHHHHHHHHhcccC
Q 043412 1 MAPFLSGGGYSSESWSYILALNEHVKN 27 (383)
Q Consensus 1 ~~p~~~~~G~~~~~~~l~~~l~~~g~~ 27 (383)
++||...||++..+.+|.++|+++|+.
T Consensus 9 ~~P~~k~GGLgdv~~~L~kaL~~~G~~ 35 (245)
T PF08323_consen 9 YAPFAKVGGLGDVVGSLPKALAKQGHD 35 (245)
T ss_dssp BTTTB-SSHHHHHHHHHHHHHHHTT-E
T ss_pred cCcccccCcHhHHHHHHHHHHHhcCCe
Confidence 489999999999999999999999963
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.001 Score=52.04 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcC-----------CChhhhhHHHHHHhhhcCCCccEEEecCCC
Q 043412 10 YSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEG-----------LPHHMRNLAVELYNTECRTNETVVICHSEP 78 (383)
Q Consensus 10 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~ 78 (383)
.+.++.++++.|.+.|+...+.. ... +..+.....+ .+..... ..++.+++++++||+||+|...
T Consensus 9 ~~~~~~~~~~~L~~~g~~V~ii~--~~~-~~~~~~~~~~i~~~~~~~~~k~~~~~~~-~~~l~k~ik~~~~DvIh~h~~~ 84 (139)
T PF13477_consen 9 PSTFIYNLAKELKKRGYDVHIIT--PRN-DYEKYEIIEGIKVIRLPSPRKSPLNYIK-YFRLRKIIKKEKPDVIHCHTPS 84 (139)
T ss_pred cHHHHHHHHHHHHHCCCEEEEEE--cCC-CchhhhHhCCeEEEEecCCCCccHHHHH-HHHHHHHhccCCCCEEEEecCC
Confidence 35688999999999987654322 211 1111110111 1222333 4588899999999999999765
Q ss_pred CCCC-CcccccCCC-CCCCCCCCcccccceeeeecCCC---CH-HHHHhcCCCCEEEEeC
Q 043412 79 GAWY-PPLFDTLPC-PPTPGYGDFMAVIGRTMFETDRV---SP-EHVKRCNRMDFVWVPT 132 (383)
Q Consensus 79 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~ad~vi~~s 132 (383)
+... ..++..... .+. ....+|......... .. .....++++|.+++.|
T Consensus 85 ~~~~~~~l~~~~~~~~~~-----i~~~hg~~~~~~~~~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 85 PYGLFAMLAKKLLKNKKV-----IYTVHGSDFYNSSKKKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred hHHHHHHHHHHHcCCCCE-----EEEecCCeeecCCchHHHHHHHHHHHHHhCCEEEEcC
Confidence 4222 222222222 122 334444333222211 11 2222368999999875
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00098 Score=64.40 Aligned_cols=137 Identities=17% Similarity=0.101 Sum_probs=70.7
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEec
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLP 267 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~p 267 (383)
++..++++.|.... .-.+..++++.+..++.|+ ++++.-.+ .....+.+-+.-...-.+ .++++...+-++-
T Consensus 275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~-----~~~~~l~~n~~~~~W~PQ-~~lL~hp~v~~fi 346 (500)
T PF00201_consen 275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEG-----EPPENLPKNVLIVKWLPQ-NDLLAHPRVKLFI 346 (500)
T ss_dssp TTEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETC-----SHGCHHHTTEEEESS--H-HHHHTSTTEEEEE
T ss_pred CCCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-cccccccc-----cccccccceEEEeccccc-hhhhhcccceeee
Confidence 56788899998642 2344444555444455566 77776654 112222211111111111 2344433332222
Q ss_pred CCCCCCChHHHHHHHcCCCEEEcCCCC----cccccc-CCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc
Q 043412 268 SRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLT-EENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~ 342 (383)
..|.-.+++||+.+|+|+|+-+.-+ ....+. .+.|..++.. .-+.+++.++|+++++
T Consensus 347 --tHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~----------------~~~~~~l~~ai~~vl~ 408 (500)
T PF00201_consen 347 --THGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKN----------------DLTEEELRAAIREVLE 408 (500)
T ss_dssp --ES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGG----------------C-SHHHHHHHHHHHHH
T ss_pred --eccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEec----------------CCcHHHHHHHHHHHHh
Confidence 3455679999999999999987732 122222 2445444432 2278999999999999
Q ss_pred CHHHHHHH
Q 043412 343 NVDEAKAK 350 (383)
Q Consensus 343 ~~~~~~~~ 350 (383)
|+..+++.
T Consensus 409 ~~~y~~~a 416 (500)
T PF00201_consen 409 NPSYKENA 416 (500)
T ss_dssp SHHHHHHH
T ss_pred hhHHHHHH
Confidence 98755443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.022 Score=54.08 Aligned_cols=175 Identities=13% Similarity=0.074 Sum_probs=91.4
Q ss_pred CCcEEEEEeecccc--ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC-----CchHHHHHHHHhhCCCC--C--cccc
Q 043412 188 SKEFVFLSVFKWEY--RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG-----RDFGNKIVNFVEDSDLE--K--PDDG 256 (383)
Q Consensus 188 ~~~~~i~~~g~~~~--~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~~~--~--~v~~ 256 (383)
+...++++.|.... ...+..+..++... +. .|+++-..+... ....+.+.+.++..|+. . .-..
T Consensus 277 ~~sVvyvsfGS~~~l~~~q~~ela~gl~~s----~~-~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~ 351 (472)
T PLN02670 277 VNSVVYVALGTEASLRREEVTELALGLEKS----ET-PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVK 351 (472)
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHC----CC-CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHH
Confidence 45788889997642 33444455555443 22 455543321110 01223333334333331 0 0023
Q ss_pred ccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccccc-CCCceeeecccccccccCCCCcccccCCCHH
Q 043412 257 WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLT-EENGYPLLVGRMSEVTEGPFKGHFWAEPSVD 331 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 331 (383)
+++...+..+- ..+.-++++||+++|+|+|+.+..+ ....+. .+.|..+.... ..| .-+.+
T Consensus 352 IL~H~~v~~Fv--tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~--------~~~----~~~~e 417 (472)
T PLN02670 352 ILSHESVGGFL--THCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDE--------RDG----SFTSD 417 (472)
T ss_pred HhcCcccceee--ecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccc--------cCC----cCcHH
Confidence 34444442222 2344579999999999999987632 122222 24444443210 001 12799
Q ss_pred HHHHHHHHHhcCHH--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 332 KLRALMRLVVSNVD--EAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 332 ~la~~i~~ll~~~~--~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
++.+++++++.+++ .+++-.++.++.+...=+.+.+++.+.+.+.+....
T Consensus 418 ~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 469 (472)
T PLN02670 418 SVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENRSS 469 (472)
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhccc
Confidence 99999999998752 222223333344556667777777777777665543
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.015 Score=57.06 Aligned_cols=127 Identities=15% Similarity=0.013 Sum_probs=89.1
Q ss_pred CCCCCCcEEEEEeeccccccCHHHHHH----HHHHHh-ccCCCeEEEEEeCCCCCCCchH---HHHHHHHhhCCCCCcc-
Q 043412 184 MNTSSKEFVFLSVFKWEYRKGWDVLLK----AYLEEF-SKADGVVLYLLTNPYHSGRDFG---NKIVNFVEDSDLEKPD- 254 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~~~~K~~~~ll~----a~~~l~-~~~~~~~l~i~G~~~~~~~~~~---~~~~~~~~~~~~~~~v- 254 (383)
....++.++++++-|+.++|...+.+. ....++ ...|.+.+++.|...+.+..-. ..+.+.++..+...+|
T Consensus 481 i~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 481 IEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred CccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEE
Confidence 335588999999999999998766543 334444 3356788888887654322222 2223333333332222
Q ss_pred ----------ccccccCceEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCcccccc---CCCceeeecc
Q 043412 255 ----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIATNWSGPTEYLT---EENGYPLLVG 310 (383)
Q Consensus 255 ----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~---~~~g~~~~~~ 310 (383)
..++.+||+-...|. .|..|.+-|-++..|.+.|+|-.|...|..+ ..||+++...
T Consensus 561 Fl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~ 631 (750)
T COG0058 561 FLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGET 631 (750)
T ss_pred EeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCc
Confidence 356699999998876 6999999999999999999999999999984 4599988643
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.054 Score=51.13 Aligned_cols=152 Identities=14% Similarity=0.099 Sum_probs=78.6
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHH-hccCCCeEEEEEeC-CC-CCCCchHHHHHHHHhhCCCCCccccccccCceE
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEE-FSKADGVVLYLLTN-PY-HSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVF 264 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l-~~~~~~~~l~i~G~-~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~ 264 (383)
++..++++.|.... -..+.+.+.+..+ ....| ..+++--. +. .......+.+.+.++..|+. +..+..+.+++
T Consensus 250 ~~sVvyvSfGS~~~-l~~~q~~e~~~~l~~s~~p-f~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~--v~~W~PQ~~iL 325 (442)
T PLN02208 250 PKSVVFCSLGSQII-LEKDQFQELCLGMELTGLP-FLIAVKPPRGSSTVQEGLPEGFEERVKGRGVV--WGGWVQQPLIL 325 (442)
T ss_pred CCcEEEEecccccc-CCHHHHHHHHHHHHhCCCc-EEEEEeCCCcccchhhhCCHHHHHHHhcCCcE--eeccCCHHHHh
Confidence 45788999998752 2445566665554 34433 34444321 10 00011223344444444442 22333333443
Q ss_pred EecCC----CCCCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCCHHHHH
Q 043412 265 VLPSR----GEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLR 334 (383)
Q Consensus 265 v~ps~----~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la 334 (383)
-.|+. ..+.-++++||+++|+|+|+-+..+ ....+.+ +.|..++.. ..| . -+.+++.
T Consensus 326 ~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~---------~~~-~---~~~~~l~ 392 (442)
T PLN02208 326 DHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE---------KTG-W---FSKESLS 392 (442)
T ss_pred cCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc---------cCC-c---CcHHHHH
Confidence 33331 2344579999999999999987732 1222222 333333211 001 1 2889999
Q ss_pred HHHHHHhcCH-HHHHHHHHHHHH
Q 043412 335 ALMRLVVSNV-DEAKAKGKQARE 356 (383)
Q Consensus 335 ~~i~~ll~~~-~~~~~~~~~a~~ 356 (383)
++++++++++ +..+++.+++++
T Consensus 393 ~ai~~~m~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 393 NAIKSVMDKDSDLGKLVRSNHTK 415 (442)
T ss_pred HHHHHHhcCCchhHHHHHHHHHH
Confidence 9999999865 344555555443
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.075 Score=50.16 Aligned_cols=178 Identities=11% Similarity=0.004 Sum_probs=88.3
Q ss_pred CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeC-CCCC-CCchHHHHHHHHhhCCCCC----cccccccc
Q 043412 187 SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTN-PYHS-GRDFGNKIVNFVEDSDLEK----PDDGWAPA 260 (383)
Q Consensus 187 ~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~-~~~~-~~~~~~~~~~~~~~~~~~~----~v~~~~~~ 260 (383)
+++..++++.|.... -..+.+-+.+..|.....++..++--. +... .....+.+.+.++..|+.- .-..+++.
T Consensus 255 ~~~sVvyvsfGS~~~-~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h 333 (453)
T PLN02764 255 EPDSVVFCALGSQVI-LEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSH 333 (453)
T ss_pred CCCceEEEeeccccc-CCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcC
Confidence 356788999998633 233445555545433333444444311 1000 0112223333333334310 01233444
Q ss_pred CceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCCHHHHH
Q 043412 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLR 334 (383)
Q Consensus 261 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la 334 (383)
..+..+- ..+.-.+++||+++|+|+|+-+..+ ....+.+ +.|+-+... ..+ .-+.+++.
T Consensus 334 ~~v~~Fv--tH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~---------~~~----~~~~e~i~ 398 (453)
T PLN02764 334 PSVGCFV--SHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE---------ETG----WFSKESLR 398 (453)
T ss_pred cccCeEE--ecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccc---------cCC----ccCHHHHH
Confidence 3332222 3345579999999999999988732 1222222 223222110 000 12889999
Q ss_pred HHHHHHhcCH-HHHHHHHHHHH---HHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 335 ALMRLVVSNV-DEAKAKGKQAR---EDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 335 ~~i~~ll~~~-~~~~~~~~~a~---~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++++++++++ +..+++.++++ +.+.+.=|-....+++.+.+++..+
T Consensus 399 ~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 399 DAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred HHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc
Confidence 9999999874 33444444443 3334444455555666666655544
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.068 Score=50.56 Aligned_cols=154 Identities=11% Similarity=-0.011 Sum_probs=79.7
Q ss_pred CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeC-CCC-CCCchHHHHHHHHhhCCCC--C--cccccccc
Q 043412 187 SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTN-PYH-SGRDFGNKIVNFVEDSDLE--K--PDDGWAPA 260 (383)
Q Consensus 187 ~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~-~~~-~~~~~~~~~~~~~~~~~~~--~--~v~~~~~~ 260 (383)
++...++++.|..... ..+.+.+.+..|.....++-.++... +.. ......+.+.+.++..|+. . .-..+++.
T Consensus 250 ~~~sVvyvsfGS~~~~-~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h 328 (446)
T PLN00414 250 EPGSVVFCAFGTQFFF-EKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSH 328 (446)
T ss_pred CCCceEEEeecccccC-CHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcC
Confidence 4567889999987532 23455555554433333333333211 100 0112234455555544432 0 11244444
Q ss_pred CceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCCHHHHH
Q 043412 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLR 334 (383)
Q Consensus 261 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la 334 (383)
..+..+- ..+.-++++||+++|+|+|+.+..+ ....+.+ +.|..+..+ ..| ..+.+++.
T Consensus 329 ~~v~~fv--tH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~---------~~~----~~~~~~i~ 393 (446)
T PLN00414 329 PSVGCFV--NHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE---------DSG----WFSKESLR 393 (446)
T ss_pred CccceEE--ecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc---------cCC----ccCHHHHH
Confidence 5332222 2344579999999999999987632 2222322 333333210 001 12899999
Q ss_pred HHHHHHhcCH-HHHHHHHHHHHH
Q 043412 335 ALMRLVVSNV-DEAKAKGKQARE 356 (383)
Q Consensus 335 ~~i~~ll~~~-~~~~~~~~~a~~ 356 (383)
+++++++.++ +..+++.+++++
T Consensus 394 ~~v~~~m~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 394 DTVKSVMDKDSEIGNLVKRNHKK 416 (446)
T ss_pred HHHHHHhcCChhhHHHHHHHHHH
Confidence 9999999864 445555555554
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0027 Score=52.23 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=62.5
Q ss_pred CChhHHHHHHHHHHHhcccCCCceeeeecCCCcc-cc------hhhcCCChhhhhHHHHHHhhhcCCCccEEEecCCCCC
Q 043412 8 GGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ-SL------QFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPGA 80 (383)
Q Consensus 8 ~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~~ 80 (383)
-|-...+..+++.|.++.....+.+.+....... -. -...-+|.+ ......++++..+||+++.... ..
T Consensus 31 vGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~P~D---~~~~~~rfl~~~~P~~~i~~Et-El 106 (186)
T PF04413_consen 31 VGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYLPLD---FPWAVRRFLDHWRPDLLIWVET-EL 106 (186)
T ss_dssp HHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE---S---SHHHHHHHHHHH--SEEEEES----
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEeCcc---CHHHHHHHHHHhCCCEEEEEcc-cc
Confidence 3556788999999998754444333333111111 00 001123333 3344566777889999888753 22
Q ss_pred CCCcccccCCCCCCCCCCCccccc-ceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecC
Q 043412 81 WYPPLFDTLPCPPTPGYGDFMAVI-GRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQ 154 (383)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~n 154 (383)
| +.++.......+..+ -..... ........+++......++..|.|++.|+..++.+.+.|.+++++.+.+|
T Consensus 107 W-Pnll~~a~~~~ip~~-LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~da~r~~~lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 107 W-PNLLREAKRRGIPVV-LVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSEADAERFRKLGAPPERVHVTGN 179 (186)
T ss_dssp --HHHHHH-----S-EE-EEEE--------------HHHHHHGGG-SEEEESSHHHHHHHHTTT-S--SEEE---
T ss_pred C-HHHHHHHhhcCCCEE-EEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCHHHHHHHHHcCCCcceEEEeCc
Confidence 3 334333322222000 000111 11111112334455556899999999999999999999999999999987
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.046 Score=52.05 Aligned_cols=144 Identities=13% Similarity=0.117 Sum_probs=73.6
Q ss_pred CCcEEEEEeecccc--ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-C--ccccccccCc
Q 043412 188 SKEFVFLSVFKWEY--RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-K--PDDGWAPAAD 262 (383)
Q Consensus 188 ~~~~~i~~~g~~~~--~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-~--~v~~~~~~ad 262 (383)
+...+++..|.... ...+..++++++. .+..++++..+. ...+.+.....++. + .-..+++..+
T Consensus 273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~-----~~~~~lw~~~~~------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~ 341 (459)
T PLN02448 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRD-----SGVRFLWVARGE------ASRLKEICGDMGLVVPWCDQLKVLCHSS 341 (459)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHh-----CCCCEEEEEcCc------hhhHhHhccCCEEEeccCCHHHHhccCc
Confidence 45678888887632 2224444444443 255777655431 11122222111111 1 0123445555
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHH
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL 336 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~ 336 (383)
+..+- ..+.-.+++||+++|+|+|+-+..+- ...+.+ +.|.-+.... + . -...+.++++++
T Consensus 342 v~~fv--tHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~------~--~---~~~~~~~~l~~a 408 (459)
T PLN02448 342 VGGFW--THCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV------G--E---ETLVGREEIAEL 408 (459)
T ss_pred cceEE--ecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc------c--c---CCcCcHHHHHHH
Confidence 52222 23445699999999999999876421 222222 3444432110 0 0 011288999999
Q ss_pred HHHHhcCH-HHHHHHHHHHH
Q 043412 337 MRLVVSNV-DEAKAKGKQAR 355 (383)
Q Consensus 337 i~~ll~~~-~~~~~~~~~a~ 355 (383)
+++++.++ +.-++|.+++.
T Consensus 409 v~~vl~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 409 VKRFMDLESEEGKEMRRRAK 428 (459)
T ss_pred HHHHhcCCchhHHHHHHHHH
Confidence 99999864 33344444443
|
|
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.048 Score=48.37 Aligned_cols=183 Identities=15% Similarity=0.085 Sum_probs=93.7
Q ss_pred CCCCEEEEeChHHHHHHHh-cCCCC-CCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 123 NRMDFVWVPTDFHVSTFIR-SGVDP-AKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 123 ~~ad~vi~~s~~~~~~~~~-~~~~~-~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
+..|.|++..+-....+.. ++..+ -+-.+.+.|.=-.. .+......... +++..+++.+|.
T Consensus 166 r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~-~~~~~~p~~~~--------------pE~~~Ilvs~GG-- 228 (400)
T COG4671 166 RFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRS-LPHLPLPPHEA--------------PEGFDILVSVGG-- 228 (400)
T ss_pred HhheEEEEecCccccChhhcCCccHhhhhheeEeEEeecc-CcCCCCCCcCC--------------CccceEEEecCC--
Confidence 6789999986655544444 65432 22234444432000 01111010000 244667777774
Q ss_pred cccCHHHHHHHHHHHhccCCCe---EEEEEeCCCCCCCchHHHHHHHHhhC------CCCCccccccccCceEEecCCCC
Q 043412 201 YRKGWDVLLKAYLEEFSKADGV---VLYLLTNPYHSGRDFGNKIVNFVEDS------DLEKPDDGWAPAADVFVLPSRGE 271 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~~~---~l~i~G~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~adi~v~ps~~e 271 (383)
..-|.+++-.++ ......+++ -+++.|...+ ....+.+...+.+. .+.+++..++..|+.+|.-+-
T Consensus 229 G~dG~eLi~~~l-~A~~~l~~l~~~~~ivtGP~MP--~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~vVSm~G-- 303 (400)
T COG4671 229 GADGAELIETAL-AAAQLLAGLNHKWLIVTGPFMP--EAQRQKLLASAPKRPHISIFEFRNDFESLLAGARLVVSMGG-- 303 (400)
T ss_pred ChhhHHHHHHHH-HHhhhCCCCCcceEEEeCCCCC--HHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhheeeeccc--
Confidence 334444433333 222222333 3555554322 23334444444432 223777899999999995542
Q ss_pred CCChHHHHHHHcCCCEEEcCCC-Cccccc-cC----CCceeeecccccccccCCCCcccccCC-CHHHHHHHHHHHhcCH
Q 043412 272 GWGRPLVEAMSMGLPVIATNWS-GPTEYL-TE----ENGYPLLVGRMSEVTEGPFKGHFWAEP-SVDKLRALMRLVVSNV 344 (383)
Q Consensus 272 ~~~~~~~Ea~a~G~PvI~~~~~-g~~e~v-~~----~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~la~~i~~ll~~~ 344 (383)
+ +++.|-+++|+|.+.-+.. +-.|.. .. .-|+ -..+.++. +++.+++++..+++.|
T Consensus 304 -Y-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL---------------~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 304 -Y-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGL---------------VDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred -c-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCc---------------ceeeCcccCChHHHHHHHHhcccCC
Confidence 2 5788999999997766553 222222 11 1221 01122222 8999999999998843
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.11 Score=49.90 Aligned_cols=142 Identities=11% Similarity=0.038 Sum_probs=67.8
Q ss_pred CCcEEEEEeecccc--ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC----CchHHHHHHHHhhCCCC--C--ccccc
Q 043412 188 SKEFVFLSVFKWEY--RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG----RDFGNKIVNFVEDSDLE--K--PDDGW 257 (383)
Q Consensus 188 ~~~~~i~~~g~~~~--~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~----~~~~~~~~~~~~~~~~~--~--~v~~~ 257 (383)
+...+++..|.... .+.+..+++++... +..|+++-..+... ....+.+.+.+...|+. + .-..+
T Consensus 284 ~~svvyvsfGS~~~~~~~~~~~~~~~l~~~-----~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~i 358 (482)
T PLN03007 284 PDSVIYLSFGSVASFKNEQLFEIAAGLEGS-----GQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLI 358 (482)
T ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHHC-----CCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHH
Confidence 45688889997643 23344444444332 33444433221110 01122333333332321 0 01244
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC--CCceeeecccccccccCCCCcccccCCCHH
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVD 331 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 331 (383)
+..+++-.+-+ .+.-++++||+++|+|+|+.+..+- ...+.+ +.|+-+.... . .+.-...-+.+
T Consensus 359 L~h~~v~~fvt--H~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~---~-----~~~~~~~~~~~ 428 (482)
T PLN03007 359 LDHQATGGFVT--HCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKK---L-----VKVKGDFISRE 428 (482)
T ss_pred hccCccceeee--cCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccc---c-----cccccCcccHH
Confidence 45555422222 3445699999999999999877321 111111 2222221100 0 00000122899
Q ss_pred HHHHHHHHHhcCH
Q 043412 332 KLRALMRLVVSNV 344 (383)
Q Consensus 332 ~la~~i~~ll~~~ 344 (383)
++++++++++.++
T Consensus 429 ~l~~av~~~m~~~ 441 (482)
T PLN03007 429 KVEKAVREVIVGE 441 (482)
T ss_pred HHHHHHHHHhcCc
Confidence 9999999999876
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.02 Score=57.02 Aligned_cols=125 Identities=18% Similarity=0.069 Sum_probs=89.7
Q ss_pred CCCCCCcEEEEEeeccccccCHHH-HHHH---HHHHhccC----CCeEEEEEeCCCCCCCchHHHHHHHHhhC-------
Q 043412 184 MNTSSKEFVFLSVFKWEYRKGWDV-LLKA---YLEEFSKA----DGVVLYLLTNPYHSGRDFGNKIVNFVEDS------- 248 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~~~~K~~~~-ll~a---~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~------- 248 (383)
..++++.+.++++-|+.++|...+ ++.. +.+++..- .+.++++.|...+.... .+.+.+++...
T Consensus 537 ~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~va~~in~D 615 (815)
T PRK14986 537 VVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDVAKVINND 615 (815)
T ss_pred CccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhccC
Confidence 457789999999999999998887 5544 55554431 35888888886553322 23333332221
Q ss_pred -CCCCc--c-----------ccccccCceEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCcccccc---CCCceeeec
Q 043412 249 -DLEKP--D-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIATNWSGPTEYLT---EENGYPLLV 309 (383)
Q Consensus 249 -~~~~~--v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~---~~~g~~~~~ 309 (383)
.+.+. + ..++.+||+-...|. .|..|.+=|-+|.-|.+.++|-.|...|+.+ ++||+.+..
T Consensus 616 p~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~ 695 (815)
T PRK14986 616 PQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGN 695 (815)
T ss_pred hhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCC
Confidence 22221 1 356699999998876 6999999999999999999999999999887 459998864
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.071 Score=50.41 Aligned_cols=140 Identities=11% Similarity=0.058 Sum_probs=74.2
Q ss_pred CCcEEEEEeeccc--cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC-C------Cc-hHHHHHHHHhhCCCC--C--c
Q 043412 188 SKEFVFLSVFKWE--YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS-G------RD-FGNKIVNFVEDSDLE--K--P 253 (383)
Q Consensus 188 ~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~-~------~~-~~~~~~~~~~~~~~~--~--~ 253 (383)
+...++++.|... +.+....+..++... +. .|+++-..+.. + .. ..+.+.+.++..|+. + .
T Consensus 269 ~~sVvyvsfGS~~~~~~~q~~ela~gL~~s----~~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~P 343 (451)
T PLN03004 269 EKSVVFLCFGSLGLFSKEQVIEIAVGLEKS----GQ-RFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAP 343 (451)
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHC----CC-CEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCC
Confidence 4578899999873 233444455555432 22 55555442110 0 00 112233333333331 0 0
Q ss_pred cccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC----Ccccccc-C-CCceeeecccccccccCCCCcccccC
Q 043412 254 DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS----GPTEYLT-E-ENGYPLLVGRMSEVTEGPFKGHFWAE 327 (383)
Q Consensus 254 v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----g~~e~v~-~-~~g~~~~~~~~~~~~~~~~~g~~~~~ 327 (383)
-..+++.+++..+-+ .+.-++++||+++|+|+|+.+.. .....+. . +.|..++.+ ..| .
T Consensus 344 Q~~iL~H~~v~~FvT--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~---------~~~----~ 408 (451)
T PLN03004 344 QVPVLNHKAVGGFVT--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES---------ETG----F 408 (451)
T ss_pred HHHHhCCCccceEec--cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC---------cCC----c
Confidence 124556666633333 34456999999999999998763 2222222 2 344434311 001 1
Q ss_pred CCHHHHHHHHHHHhcCHHHH
Q 043412 328 PSVDKLRALMRLVVSNVDEA 347 (383)
Q Consensus 328 ~~~~~la~~i~~ll~~~~~~ 347 (383)
.+.+++++++++++++++.+
T Consensus 409 ~~~e~l~~av~~vm~~~~~r 428 (451)
T PLN03004 409 VSSTEVEKRVQEIIGECPVR 428 (451)
T ss_pred cCHHHHHHHHHHHhcCHHHH
Confidence 28999999999999876543
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.24 Score=47.40 Aligned_cols=87 Identities=13% Similarity=0.061 Sum_probs=47.1
Q ss_pred cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-cC-CCceeeecccccccccCCCCcccccCCC
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYL-TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v-~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
.+++..++..+-+ .+.-.+++||+++|+|+|+-+.-+ ....+ +. +.|+-+... ....+ .-+
T Consensus 351 ~iL~h~~vg~fvt--H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~-------~~~~~----~~~ 417 (480)
T PLN00164 351 EILAHAAVGGFVT--HCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVD-------RKRDN----FVE 417 (480)
T ss_pred HHhcCcccCeEEe--ecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccc-------cccCC----cCc
Confidence 3445555422222 233468999999999999987632 12122 21 344333210 00000 127
Q ss_pred HHHHHHHHHHHhcCHH-HHHHHHHHHH
Q 043412 330 VDKLRALMRLVVSNVD-EAKAKGKQAR 355 (383)
Q Consensus 330 ~~~la~~i~~ll~~~~-~~~~~~~~a~ 355 (383)
.++++++|++++.+++ ..+.|.++++
T Consensus 418 ~e~l~~av~~vm~~~~~~~~~~r~~a~ 444 (480)
T PLN00164 418 AAELERAVRSLMGGGEEEGRKAREKAA 444 (480)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 8999999999997643 2334444433
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.041 Score=54.62 Aligned_cols=125 Identities=16% Similarity=0.068 Sum_probs=88.7
Q ss_pred CCCCCCcEEEEEeeccccccCHHH-HHHH---HHHHhcc----CCCeEEEEEeCCCCCCCchHHHHHHHHhhC----CC-
Q 043412 184 MNTSSKEFVFLSVFKWEYRKGWDV-LLKA---YLEEFSK----ADGVVLYLLTNPYHSGRDFGNKIVNFVEDS----DL- 250 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~~~~K~~~~-ll~a---~~~l~~~----~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~----~~- 250 (383)
..++++.+..+++-|+.++|...+ ++.. +.+++.. ..+.++++.|...+... ..+.+.+++... +-
T Consensus 523 ~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~D 601 (798)
T PRK14985 523 IEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY-LAKNIIFAINKVAEVINND 601 (798)
T ss_pred CccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhcCC
Confidence 457789999999999999998777 5444 4555443 12478888887654332 223333333322 11
Q ss_pred ---CCc--c-----------ccccccCceEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCcccccc---CCCceeeec
Q 043412 251 ---EKP--D-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIATNWSGPTEYLT---EENGYPLLV 309 (383)
Q Consensus 251 ---~~~--v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~---~~~g~~~~~ 309 (383)
.+. + ..++.+||+-...|. .|..|.+=|-+|..|.+.++|-.|...|+.+ ++|++++..
T Consensus 602 p~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~ 681 (798)
T PRK14985 602 PLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGH 681 (798)
T ss_pred hhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCC
Confidence 121 1 356699999998876 6999999999999999999999999888887 569988864
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.12 Score=49.55 Aligned_cols=73 Identities=14% Similarity=0.153 Sum_probs=40.6
Q ss_pred CCCChHHHHHHHcCCCEEEcCCCC----cc-ccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-C
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWSG----PT-EYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-N 343 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~g----~~-e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~ 343 (383)
.+.-.+++||+.+|+|+|+.+..+ .. ..++. +.|..++... ..+...|. -..-+.+++.+++++++. +
T Consensus 367 H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~----~~~~~~~~-~~~~~~e~l~~av~~vm~~~ 441 (481)
T PLN02554 367 HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYW----RGDLLAGE-METVTAEEIERGIRCLMEQD 441 (481)
T ss_pred cCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccc----cccccccc-cCeEcHHHHHHHHHHHhcCC
Confidence 344569999999999999987632 11 11222 4444443100 00000000 001289999999999996 5
Q ss_pred HHHHH
Q 043412 344 VDEAK 348 (383)
Q Consensus 344 ~~~~~ 348 (383)
++.++
T Consensus 442 ~~~r~ 446 (481)
T PLN02554 442 SDVRK 446 (481)
T ss_pred HHHHH
Confidence 54443
|
|
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.071 Score=50.58 Aligned_cols=157 Identities=15% Similarity=0.107 Sum_probs=96.0
Q ss_pred ccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCC-CCCCChH
Q 043412 200 EYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSR-GEGWGRP 276 (383)
Q Consensus 200 ~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~-~e~~~~~ 276 (383)
..+++-+..++++.+. -+++-.|.+.. .....+-..+.+.|+. +++..+++.+.++|-... +| |=+
T Consensus 288 ~~w~~k~~~l~~l~~~----~eih~tV~~~~-----~~~~~~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~E--gPa 356 (559)
T PF15024_consen 288 YMWKGKEKYLDVLHKY----MEIHGTVYDEP-----QRPPNVPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYE--GPA 356 (559)
T ss_pred hhhcCcHHHHHHHHhh----cEEEEEeccCC-----CCCcccchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCC--CCC
Confidence 3466777777777543 35555554432 2234566678888885 677889999999995433 33 347
Q ss_pred HHHHHHcCCCEEEcCCCCc-----cccccCC-Cceeeecccccccc--cCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 277 LVEAMSMGLPVIATNWSGP-----TEYLTEE-NGYPLLVGRMSEVT--EGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 277 ~~Ea~a~G~PvI~~~~~g~-----~e~v~~~-~g~~~~~~~~~~~~--~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
.+||++.|+|-|-...... .+++.+. +-.-+.+. .|++. .+...=..++..|.+++.+||+++++++-
T Consensus 357 PlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQ-hPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v--- 432 (559)
T PF15024_consen 357 PLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQ-HPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATPV--- 432 (559)
T ss_pred hHHHHHcCCccccccCCCCCcccccccccCCCCcceeccC-ChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCC---
Confidence 9999999999888765322 1222211 11111110 12222 11122234444599999999999998652
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
.-++--.|+-+.+.+|+..+++.
T Consensus 433 ------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 433 ------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred ------CCcCCcccCHHHHHHHHHHHHHh
Confidence 12345679999999999877763
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.92 Score=38.80 Aligned_cols=147 Identities=15% Similarity=0.079 Sum_probs=76.1
Q ss_pred CCCCEEEEeChHHHHHHHhcCCCCCCeEEe---cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc
Q 043412 123 NRMDFVWVPTDFHVSTFIRSGVDPAKVVKI---VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW 199 (383)
Q Consensus 123 ~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi---~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~ 199 (383)
...|.||++-++..+.....+ .++.-| +|.|......+..... .++...+..++-+.+|.-
T Consensus 108 ~~fDlvivp~HD~~~~~s~~~---~Nilpi~Gs~h~Vt~~~lAa~~e~~-------------~~~~p~~rq~vAVlVGg~ 171 (329)
T COG3660 108 NHFDLVIVPYHDWREELSDQG---PNILPINGSPHNVTSQRLAALREAF-------------KHLLPLPRQRVAVLVGGN 171 (329)
T ss_pred ccceEEeccchhhhhhhhccC---CceeeccCCCCcccHHHhhhhHHHH-------------HhhCCCCCceEEEEecCC
Confidence 458999998877776543322 244433 2333222221111110 011123567888888876
Q ss_pred ccccCH--HHHHHHHHHHhccC--CCeEEEEEeCCCCCCCchHHHHHHHHhh-C----CCC--------CccccccccCc
Q 043412 200 EYRKGW--DVLLKAYLEEFSKA--DGVVLYLLTNPYHSGRDFGNKIVNFVED-S----DLE--------KPDDGWAPAAD 262 (383)
Q Consensus 200 ~~~K~~--~~ll~a~~~l~~~~--~~~~l~i~G~~~~~~~~~~~~~~~~~~~-~----~~~--------~~v~~~~~~ad 262 (383)
++.-.+ |...+....+.+.. ....+++.-+- ...+.++..++. + ++. .....+++.||
T Consensus 172 nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSR-----RTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ad 246 (329)
T COG3660 172 NKAFVFQEDKAHQFASLLVKILENQGGSFLISFSR-----RTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAAD 246 (329)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeec-----CCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcc
Confidence 544333 33333332222221 24566665443 223444444433 1 111 12357889999
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
.++.+...- ..+-||.+.|+||-+-...
T Consensus 247 yii~TaDSi---nM~sEAasTgkPv~~~~~~ 274 (329)
T COG3660 247 YIISTADSI---NMCSEAASTGKPVFILEPP 274 (329)
T ss_pred eEEEecchh---hhhHHHhccCCCeEEEecC
Confidence 999886432 2467999999999876554
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.49 Score=45.29 Aligned_cols=137 Identities=15% Similarity=0.180 Sum_probs=67.5
Q ss_pred CCcEEEEEeecccc--ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC----CchHHHHHHHHhhCCCC--C--ccccc
Q 043412 188 SKEFVFLSVFKWEY--RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG----RDFGNKIVNFVEDSDLE--K--PDDGW 257 (383)
Q Consensus 188 ~~~~~i~~~g~~~~--~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~----~~~~~~~~~~~~~~~~~--~--~v~~~ 257 (383)
+...+++..|.+.. .+.+..+++++... +..|+++-+.+... ......+.+.+...|+. . .-..+
T Consensus 282 ~~svVyvsfGS~~~~~~~~~~ela~gL~~~-----~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~v 356 (477)
T PLN02863 282 DHKVVYVCFGSQVVLTKEQMEALASGLEKS-----GVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAI 356 (477)
T ss_pred CCceEEEEeeceecCCHHHHHHHHHHHHhC-----CCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHH
Confidence 35678888887643 22344444444332 34555554321110 01122333333333321 0 01233
Q ss_pred ccc--CceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-cC-CCceeeecccccccccCCCCcccccCCC
Q 043412 258 APA--ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYL-TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 258 ~~~--adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v-~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
++. +++|| ..+.-.+++||+++|+|+|+-+..+ ....+ +. +.|.-+..+ .+ ...+
T Consensus 357 L~h~~v~~fv----tH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~----------~~---~~~~ 419 (477)
T PLN02863 357 LSHRAVGAFL----THCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG----------AD---TVPD 419 (477)
T ss_pred hcCCCcCeEE----ecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC----------CC---CCcC
Confidence 443 33444 3344569999999999999987632 12222 22 344322110 00 1127
Q ss_pred HHHHHHHHHHHh-cCHHH
Q 043412 330 VDKLRALMRLVV-SNVDE 346 (383)
Q Consensus 330 ~~~la~~i~~ll-~~~~~ 346 (383)
.+++.+++++++ ++++.
T Consensus 420 ~~~v~~~v~~~m~~~~~~ 437 (477)
T PLN02863 420 SDELARVFMESVSENQVE 437 (477)
T ss_pred HHHHHHHHHHHhhccHHH
Confidence 889999999988 44443
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.19 Score=49.58 Aligned_cols=187 Identities=14% Similarity=0.094 Sum_probs=104.2
Q ss_pred cCCCCEEEEeChHHHHHHHh------cCCCCCCeEEecCCCcCCCCCCCC-C-----------CCCc--cccCCcc-ccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR------SGVDPAKVVKIVQPVHVGFFDPVN-C-----------DPID--LASIGKP-VLG 180 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~------~~~~~~~i~vi~ngid~~~~~~~~-~-----------~~~~--~~~~~~~-~l~ 180 (383)
+..+..+-.+|.-..+.+++ +...|+++.-+.|||....+-... + .... .....++ .+.
T Consensus 329 l~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~ 408 (713)
T PF00343_consen 329 LRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFA 408 (713)
T ss_dssp HHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGC
T ss_pred HHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhh
Confidence 46677888899887776653 234567899999999887654210 0 0000 0000000 000
Q ss_pred --------------------------cCCCCCCCCcEEEEEeeccccccCHHHH----HHHHHHHhcc----CCCeEEEE
Q 043412 181 --------------------------LSNMNTSSKEFVFLSVFKWEYRKGWDVL----LKAYLEEFSK----ADGVVLYL 226 (383)
Q Consensus 181 --------------------------~~~~~~~~~~~~i~~~g~~~~~K~~~~l----l~a~~~l~~~----~~~~~l~i 226 (383)
..+..++++.+..+++-|+.++|...+. +..+.+++.. ..++++++
T Consensus 409 dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IF 488 (713)
T PF00343_consen 409 DDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIF 488 (713)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEE
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEE
Confidence 0025577899999999999999997773 3455566543 23588999
Q ss_pred EeCCCCCCCchHHHHHHHHhh--------CCCCCc--c-----------ccccccCceEEecCC--CCCCChHHHHHHHc
Q 043412 227 LTNPYHSGRDFGNKIVNFVED--------SDLEKP--D-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSM 283 (383)
Q Consensus 227 ~G~~~~~~~~~~~~~~~~~~~--------~~~~~~--v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~ 283 (383)
.|...+.+.. .+.+.+++.. ..+.+. | ..++..+|+-+..|+ .|+.|.+-+-+|..
T Consensus 489 aGKAhP~d~~-gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N 567 (713)
T PF00343_consen 489 AGKAHPGDYM-GKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN 567 (713)
T ss_dssp E----TT-HH-HHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT
T ss_pred eccCCCCcHH-HHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC
Confidence 9886543322 2333333322 122221 1 356699999999886 69999999999999
Q ss_pred CCCEEEcCCCCcccccc---CCCceeeec
Q 043412 284 GLPVIATNWSGPTEYLT---EENGYPLLV 309 (383)
Q Consensus 284 G~PvI~~~~~g~~e~v~---~~~g~~~~~ 309 (383)
|.+.+++-.|...|+.+ ++|.+++..
T Consensus 568 GaL~lstlDG~niEi~e~vG~eN~fiFG~ 596 (713)
T PF00343_consen 568 GALNLSTLDGWNIEIAEAVGEENIFIFGL 596 (713)
T ss_dssp T-EEEEESSTCHHHHHHHH-GGGSEEES-
T ss_pred CCeEEecccchhHHHHHhcCCCcEEEcCC
Confidence 99999999999988875 357777753
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.31 Score=46.22 Aligned_cols=136 Identities=11% Similarity=0.057 Sum_probs=69.5
Q ss_pred CcEEEEEeeccc---cccCHHHHHHHHHHHhccCCCeEEEEE-eCCCCCCCchHHHHHHHHhhCCCC-C--ccccccccC
Q 043412 189 KEFVFLSVFKWE---YRKGWDVLLKAYLEEFSKADGVVLYLL-TNPYHSGRDFGNKIVNFVEDSDLE-K--PDDGWAPAA 261 (383)
Q Consensus 189 ~~~~i~~~g~~~---~~K~~~~ll~a~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~~~-~--~v~~~~~~a 261 (383)
...+++..|... +.+.+..+..++... + .+|+++ ..+. .....+.+.+.+...+.. + .-..+++..
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~----g-~~fiW~~~~~~--~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~ 345 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEAS----G-RPFIWVLNPVW--REGLPPGYVERVSKQGKVVSWAPQLEVLKHQ 345 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHC----C-CCEEEEEcCCc--hhhCCHHHHHHhccCEEEEecCCHHHHhCCC
Confidence 457888888753 334455555555443 2 255443 2210 001122222222222211 0 012344444
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
++..+-+ .+.-.+++||+++|+|+|+.+..+ ....+.+.-| .|+-+...+.+++++++
T Consensus 346 ~v~~fvt--H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g----------------~g~~~~~~~~~~l~~~v 407 (448)
T PLN02562 346 AVGCYLT--HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWK----------------IGVRISGFGQKEVEEGL 407 (448)
T ss_pred ccceEEe--cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhC----------------ceeEeCCCCHHHHHHHH
Confidence 4322222 344569999999999999987632 1122211111 22222233889999999
Q ss_pred HHHhcCHHHHHH
Q 043412 338 RLVVSNVDEAKA 349 (383)
Q Consensus 338 ~~ll~~~~~~~~ 349 (383)
++++.|++.+++
T Consensus 408 ~~~l~~~~~r~~ 419 (448)
T PLN02562 408 RKVMEDSGMGER 419 (448)
T ss_pred HHHhCCHHHHHH
Confidence 999988765544
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.073 Score=53.16 Aligned_cols=125 Identities=16% Similarity=0.062 Sum_probs=88.9
Q ss_pred CCCCCCcEEEEEeeccccccCHHH-H---HHHHHHHhccC----CCeEEEEEeCCCCCCCchHHHHHHHHhhC-------
Q 043412 184 MNTSSKEFVFLSVFKWEYRKGWDV-L---LKAYLEEFSKA----DGVVLYLLTNPYHSGRDFGNKIVNFVEDS------- 248 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~~~~K~~~~-l---l~a~~~l~~~~----~~~~l~i~G~~~~~~~~~~~~~~~~~~~~------- 248 (383)
..++++.+..+++-|+.++|...+ + ++.+.+++..- .+.++++.|...+.... .+.+.+++...
T Consensus 524 ~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~D 602 (797)
T cd04300 524 VEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYM-AKLIIKLINAVADVVNND 602 (797)
T ss_pred CccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHhccC
Confidence 456899999999999999999888 4 44556665431 34788888876543322 23333332222
Q ss_pred -CCCCc--c-----------ccccccCceEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccC---CCceeeec
Q 043412 249 -DLEKP--D-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE---ENGYPLLV 309 (383)
Q Consensus 249 -~~~~~--v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~---~~g~~~~~ 309 (383)
.+.+. + ..++.+||+-...|. .|..|.+=|-+|..|.+.++|-.|...|+.++ +|++++..
T Consensus 603 p~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~ 682 (797)
T cd04300 603 PDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGL 682 (797)
T ss_pred hhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCC
Confidence 12221 1 356699999988876 69999999999999999999999988888874 58888864
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.26 Score=44.22 Aligned_cols=101 Identities=19% Similarity=0.167 Sum_probs=63.4
Q ss_pred CcEEEEEeecccccc--CHH---HHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CC-------CCccc
Q 043412 189 KEFVFLSVFKWEYRK--GWD---VLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DL-------EKPDD 255 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K--~~~---~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~-------~~~v~ 255 (383)
...+.+.+|.-+... +.+ .+++.+..+.+..+ ..+.|..+.. ...+....+.+..+.. ++ .+-+.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRR-Tp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~ 223 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRR-TPPEAEAALRELLKDNPGVYIWDGTGENPYL 223 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCC-CcHHHHHHHHHhhcCCCceEEecCCCCCcHH
Confidence 345555555433222 333 66777777776665 7888887652 2223445555555322 11 12356
Q ss_pred cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG 294 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g 294 (383)
.+++.||.++.+...- .-+.||+++|+||.+-...+
T Consensus 224 ~~La~ad~i~VT~DSv---SMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 224 GFLAAADAIVVTEDSV---SMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHHHhCCEEEEcCccH---HHHHHHHHcCCCEEEecCCC
Confidence 7889999999886532 35789999999999998876
|
The function of this family is unknown. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.25 Score=47.12 Aligned_cols=60 Identities=23% Similarity=0.120 Sum_probs=38.5
Q ss_pred CCCChHHHHHHHcCCCEEEcCCCC----cccccc-C-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCH
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWSG----PTEYLT-E-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~-~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~ 344 (383)
.+.-++++||+.+|+|+|+.+..+ ....+. . +.|.-++.. ++ .-+.+++++++++++.++
T Consensus 363 H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~----------~~----~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 363 HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP----------KE----VISRSKIEALVRKVMVEE 428 (481)
T ss_pred cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC----------CC----cccHHHHHHHHHHHhcCC
Confidence 345579999999999999997632 222221 1 333333210 00 128899999999999764
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.017 Score=46.40 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=32.1
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCC
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFF 161 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~ 161 (383)
+..||..+++|.++++.+-..-. +||.||.-|||++.+
T Consensus 133 l~~~D~~isPT~wQ~~~fP~~~r--~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 133 LEQADAGISPTRWQRSQFPAEFR--SKISVIHDGIDTDRF 170 (171)
T ss_pred HHhCCcCcCCCHHHHHhCCHHHH--cCcEEeecccchhhc
Confidence 68899999999999998876322 499999999998765
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.62 Score=44.33 Aligned_cols=140 Identities=13% Similarity=0.112 Sum_probs=69.1
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHh-hCCCCC---ccccccccCce
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVE-DSDLEK---PDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~-~~~~~~---~v~~~~~~adi 263 (383)
+...+++..|..... ..+.+-+.+..|... +.+|+++-.... .......+.+... ..|+.. .-..+++.+++
T Consensus 268 ~~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~-~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~v 343 (456)
T PLN02210 268 RSSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKE-KAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAI 343 (456)
T ss_pred CCceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCc-cccchhhHHhhccCCCeEEEecCCHHHHhcCcCc
Confidence 356888888976432 233333333333322 345554332211 1111222333331 222210 01234455553
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
..+-+ .+.-.+++||+++|+|+|+-+..+ ....+.+ +.|..+... ...| ..+.+++++++
T Consensus 344 g~Fit--H~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~--------~~~~----~~~~~~l~~av 409 (456)
T PLN02210 344 SCFVT--HCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRND--------AVDG----ELKVEEVERCI 409 (456)
T ss_pred CeEEe--eCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEecc--------ccCC----cCCHHHHHHHH
Confidence 22222 233458999999999999987732 1222222 455444311 0001 12889999999
Q ss_pred HHHhcCHH
Q 043412 338 RLVVSNVD 345 (383)
Q Consensus 338 ~~ll~~~~ 345 (383)
++++.+++
T Consensus 410 ~~~m~~~~ 417 (456)
T PLN02210 410 EAVTEGPA 417 (456)
T ss_pred HHHhcCch
Confidence 99998754
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.44 Score=45.25 Aligned_cols=136 Identities=10% Similarity=0.124 Sum_probs=67.4
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC-CCCc----hHHHHHHHHhhCCCCCc---cccccc
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH-SGRD----FGNKIVNFVEDSDLEKP---DDGWAP 259 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~-~~~~----~~~~~~~~~~~~~~~~~---v~~~~~ 259 (383)
++..+++..|.... -..+.+.+.+..|.... . .|+++-.... ...+ ..+.+.+.+...++.-. -..+++
T Consensus 263 ~~sVvyvsfGS~~~-~~~~q~~ela~gLe~s~-~-~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~ 339 (451)
T PLN02410 263 KNSVIFVSLGSLAL-MEINEVMETASGLDSSN-Q-QFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLS 339 (451)
T ss_pred CCcEEEEEcccccc-CCHHHHHHHHHHHHhcC-C-CeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhC
Confidence 45789999997642 22334444444443222 2 4444433110 0001 22333333433332110 012334
Q ss_pred cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC--CCceeeecccccccccCCCCcccccCCCHHHH
Q 043412 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKL 333 (383)
Q Consensus 260 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 333 (383)
..++..+- ..+.-++++||+++|+|+|+.+..+- ...+.+ +.|+-+. ...+.+++
T Consensus 340 h~~v~~fv--tH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-----------------~~~~~~~v 400 (451)
T PLN02410 340 HPAVGGFW--SHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-----------------GDLDRGAV 400 (451)
T ss_pred CCccCeee--ecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-----------------CcccHHHH
Confidence 43331111 23444699999999999999876321 111111 2332221 12389999
Q ss_pred HHHHHHHhcCHH
Q 043412 334 RALMRLVVSNVD 345 (383)
Q Consensus 334 a~~i~~ll~~~~ 345 (383)
++++++++.+++
T Consensus 401 ~~av~~lm~~~~ 412 (451)
T PLN02410 401 ERAVKRLMVEEE 412 (451)
T ss_pred HHHHHHHHcCCc
Confidence 999999998754
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.49 Score=44.88 Aligned_cols=62 Identities=16% Similarity=0.198 Sum_probs=38.2
Q ss_pred CCCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCH
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~ 344 (383)
.+..++++||+.+|+|+|+-+..+ ....+.+ +.|+-+..+ .. ...+.++++++++++++++
T Consensus 352 H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~---------~~----~~~~~e~l~~av~~vm~~~ 418 (455)
T PLN02152 352 HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVREN---------SE----GLVERGEIRRCLEAVMEEK 418 (455)
T ss_pred eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecC---------cC----CcCcHHHHHHHHHHHHhhh
Confidence 344579999999999999987632 1112222 233332210 00 0127899999999999754
Q ss_pred H
Q 043412 345 D 345 (383)
Q Consensus 345 ~ 345 (383)
.
T Consensus 419 ~ 419 (455)
T PLN02152 419 S 419 (455)
T ss_pred H
Confidence 3
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.13 Score=51.35 Aligned_cols=125 Identities=16% Similarity=0.058 Sum_probs=88.6
Q ss_pred CCCCCCcEEEEEeeccccccCHHH-HHH---HHHHHhcc----CCCeEEEEEeCCCCCCCchHHHHHHHHhhCC------
Q 043412 184 MNTSSKEFVFLSVFKWEYRKGWDV-LLK---AYLEEFSK----ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD------ 249 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~~~~K~~~~-ll~---a~~~l~~~----~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~------ 249 (383)
..++++.+..+++-|+.++|...+ ++. .+.+++.. ..+.++++.|...+.. ...+.+.+++....
T Consensus 521 ~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~iN~D 599 (794)
T TIGR02093 521 VEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY-HMAKLIIKLINSVAEVVNND 599 (794)
T ss_pred CccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc-HHHHHHHHHHHHHHHHhccC
Confidence 346789999999999999998877 444 45555443 1256888888765432 22233433433322
Q ss_pred --CCCc--c-----------ccccccCceEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccC---CCceeeec
Q 043412 250 --LEKP--D-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE---ENGYPLLV 309 (383)
Q Consensus 250 --~~~~--v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~---~~g~~~~~ 309 (383)
+.+. | ..++.+||+-...|. .|..|.+=|-+|..|.+.++|-.|...|+.++ +|++++..
T Consensus 600 p~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~ 679 (794)
T TIGR02093 600 PAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGL 679 (794)
T ss_pred hhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCC
Confidence 2221 1 356689999988876 69999999999999999999999988888864 58888864
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.15 Score=44.79 Aligned_cols=85 Identities=14% Similarity=0.067 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-----CCccccccccCceEEecCCCCCCChHHH
Q 043412 204 GWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-----EKPDDGWAPAADVFVLPSRGEGWGRPLV 278 (383)
Q Consensus 204 ~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~adi~v~ps~~e~~~~~~~ 278 (383)
....+++.+..+.+..|+.+++|---...........+.+.....+. ..++..++..||.++.-+ +.+-+
T Consensus 138 ~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~Vvtin-----StvGl 212 (269)
T PF05159_consen 138 SQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELLEQSDAVVTIN-----STVGL 212 (269)
T ss_pred cHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHHHhCCEEEEEC-----CHHHH
Confidence 45667777777777888999888654311111111222222121111 134578889999888554 46889
Q ss_pred HHHHcCCCEEEcCCC
Q 043412 279 EAMSMGLPVIATNWS 293 (383)
Q Consensus 279 Ea~a~G~PvI~~~~~ 293 (383)
||+.+|+||++...+
T Consensus 213 EAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 213 EALLHGKPVIVFGRA 227 (269)
T ss_pred HHHHcCCceEEecCc
Confidence 999999999998764
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.79 Score=43.66 Aligned_cols=138 Identities=10% Similarity=0.097 Sum_probs=66.6
Q ss_pred CCcEEEEEeeccc--cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC--CCchHHHHHHHHhhCCCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWE--YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS--GRDFGNKIVNFVEDSDLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~--~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~adi 263 (383)
+...++++.|... +.+.+..+..++... ..+|+++-..+.. .....+.+.+.+...++ +..+..+-++
T Consensus 274 ~~sVVyvSfGS~~~~~~~q~~ela~~l~~~-----~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~---i~~W~PQ~~I 345 (468)
T PLN02207 274 EASVVFLCFGSMGRLRGPLVKEIAHGLELC-----QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGM---ICGWSPQVEI 345 (468)
T ss_pred CCcEEEEEeccCcCCCHHHHHHHHHHHHHC-----CCcEEEEEeCCCccccccCCHHHHhhcCCCeE---EEEeCCHHHH
Confidence 3578888888764 233455555555443 2355554332110 01111222222222222 2333333333
Q ss_pred EEecCC----CCCCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCCHHHH
Q 043412 264 FVLPSR----GEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKL 333 (383)
Q Consensus 264 ~v~ps~----~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 333 (383)
+-.|+. ..+.-++++||+++|+|+|+-+..+ ...++.+ +.|.-+..+. .. ... ..-+.+++
T Consensus 346 L~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~---~~--~~~----~~v~~e~i 416 (468)
T PLN02207 346 LAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDY---RV--HSD----EIVNANEI 416 (468)
T ss_pred hcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccc---cc--ccC----CcccHHHH
Confidence 333322 2334468999999999999987632 1221111 2333221100 00 000 01278999
Q ss_pred HHHHHHHhc
Q 043412 334 RALMRLVVS 342 (383)
Q Consensus 334 a~~i~~ll~ 342 (383)
.++|++++.
T Consensus 417 ~~av~~vm~ 425 (468)
T PLN02207 417 ETAIRCVMN 425 (468)
T ss_pred HHHHHHHHh
Confidence 999999996
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.98 Score=43.33 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=44.1
Q ss_pred CCChHHHHHHHcCCCEEEcCCCCc----ccc-ccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCH-
Q 043412 272 GWGRPLVEAMSMGLPVIATNWSGP----TEY-LTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV- 344 (383)
Q Consensus 272 ~~~~~~~Ea~a~G~PvI~~~~~g~----~e~-v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~- 344 (383)
+.-++++||+++|+|+|+-+..+- ... +.. +.|..+.... .+ ..+ ...+.+++++++++++.++
T Consensus 366 ~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~-----~~-~~~---~~~~~~~l~~av~~~m~~~~ 436 (475)
T PLN02167 366 CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY-----VS-AYG---EIVKADEIAGAVRSLMDGED 436 (475)
T ss_pred CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc-----cc-ccC---CcccHHHHHHHHHHHhcCCH
Confidence 334589999999999999876321 111 222 3444332110 00 000 0127899999999999754
Q ss_pred HHH---HHHHHHHHHHHHhc
Q 043412 345 DEA---KAKGKQAREDMIQR 361 (383)
Q Consensus 345 ~~~---~~~~~~a~~~~~~~ 361 (383)
+.+ +++++.+++-+.+.
T Consensus 437 ~~r~~a~~~~~~~~~av~~g 456 (475)
T PLN02167 437 VPRKKVKEIAEAARKAVMDG 456 (475)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 222 33444444444433
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=94.22 E-value=1.3 Score=42.02 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=48.5
Q ss_pred cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCC
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
.+++..++..+-+ .+..++++||+++|+|+|+-+.-+ ....+.+ +.|.-+..+ ..+| . -+
T Consensus 329 ~iL~H~~v~~Fvt--HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~--------~~~~-~---~~ 394 (449)
T PLN02173 329 QVLSNKAIGCFMT--HCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE--------KESG-I---AK 394 (449)
T ss_pred HHhCCCccceEEe--cCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec--------ccCC-c---cc
Confidence 3444544333222 345679999999999999987632 2222222 344433311 0001 1 17
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043412 330 VDKLRALMRLVVSNVDEAKAKGKQAR 355 (383)
Q Consensus 330 ~~~la~~i~~ll~~~~~~~~~~~~a~ 355 (383)
.+++++++++++.+++ .++|.++++
T Consensus 395 ~e~v~~av~~vm~~~~-~~~~r~~a~ 419 (449)
T PLN02173 395 REEIEFSIKEVMEGEK-SKEMKENAG 419 (449)
T ss_pred HHHHHHHHHHHhcCCh-HHHHHHHHH
Confidence 8999999999998643 234444433
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=93.99 E-value=1.5 Score=41.90 Aligned_cols=74 Identities=19% Similarity=0.156 Sum_probs=42.2
Q ss_pred CCCChHHHHHHHcCCCEEEcCCCC----cccccc-C-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCH
Q 043412 271 EGWGRPLVEAMSMGLPVIATNWSG----PTEYLT-E-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344 (383)
Q Consensus 271 e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~-~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~ 344 (383)
.+.-.+++||+.+|+|+|+.+.-+ ....+. . +.|+-+... +...+ .-+.+++.+++++++.++
T Consensus 362 H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~-------~~~~~----~v~~~~v~~~v~~vm~~~ 430 (480)
T PLN02555 362 HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG-------EAENK----LITREEVAECLLEATVGE 430 (480)
T ss_pred cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC-------ccccC----cCcHHHHHHHHHHHhcCc
Confidence 444579999999999999988732 111111 2 333333100 00000 127899999999999764
Q ss_pred HHHHHHHHHHHH
Q 043412 345 DEAKAKGKQARE 356 (383)
Q Consensus 345 ~~~~~~~~~a~~ 356 (383)
+ -++|.++|++
T Consensus 431 ~-g~~~r~ra~~ 441 (480)
T PLN02555 431 K-AAELKQNALK 441 (480)
T ss_pred h-HHHHHHHHHH
Confidence 3 2344444433
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.84 E-value=1.4 Score=40.21 Aligned_cols=93 Identities=16% Similarity=0.190 Sum_probs=61.5
Q ss_pred cEEEEEee-ccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC----CC-----Cccccc
Q 043412 190 EFVFLSVF-KWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD----LE-----KPDDGW 257 (383)
Q Consensus 190 ~~~i~~~g-~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~----~~-----~~v~~~ 257 (383)
..+++..| .-...|.+ +.+.+.+..+.++. .+++++|+. +..+..+++....+ +. +++..+
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~-----~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~l 248 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGP-----DEEERAEEIAKGLPNAVILAGKTSLEELAAL 248 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecCh-----HHHHHHHHHHHhcCCccccCCCCCHHHHHHH
Confidence 56677777 54456654 46777777776665 788898876 23344444443333 22 456688
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG 294 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g 294 (383)
+..||++|.+.. -.+-=|.|.|+|+|+--...
T Consensus 249 i~~a~l~I~~DS-----g~~HlAaA~~~P~I~iyg~t 280 (334)
T COG0859 249 IAGADLVIGNDS-----GPMHLAAALGTPTIALYGPT 280 (334)
T ss_pred HhcCCEEEccCC-----hHHHHHHHcCCCEEEEECCC
Confidence 899999997763 24556889999999986543
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.46 Score=41.05 Aligned_cols=135 Identities=15% Similarity=0.080 Sum_probs=78.4
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC-C-----CCccccccccCce
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD-L-----EKPDDGWAPAADV 263 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~-~-----~~~v~~~~~~adi 263 (383)
+-+++..|.-+ .|+ +..+.+..+.+.. +.+.++-+. ..+....+.+.++... + .+++..++..||+
T Consensus 159 r~ilI~lGGsD-pk~--lt~kvl~~L~~~~--~nl~iV~gs---~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~ 230 (318)
T COG3980 159 RDILITLGGSD-PKN--LTLKVLAELEQKN--VNLHIVVGS---SNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL 230 (318)
T ss_pred heEEEEccCCC-hhh--hHHHHHHHhhccC--eeEEEEecC---CCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch
Confidence 33455555433 344 4566776665543 555444332 1244566666666543 2 2678899999999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEE----cCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIA----TNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~----~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
.+.. -|.++.||+..|+|.++ .+.......++. -|+..+ .|.. -........+.+
T Consensus 231 aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~------------l~~~---l~~~~~~~~~~~ 289 (318)
T COG3980 231 AISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQ------------LGYH---LKDLAKDYEILQ 289 (318)
T ss_pred heec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhh------------ccCC---CchHHHHHHHHH
Confidence 8844 37899999999999332 222222222221 122111 1111 156777888888
Q ss_pred HhcCHHHHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQ 353 (383)
Q Consensus 340 ll~~~~~~~~~~~~ 353 (383)
+.+|+..++.+...
T Consensus 290 i~~d~~~rk~l~~~ 303 (318)
T COG3980 290 IQKDYARRKNLSFG 303 (318)
T ss_pred hhhCHHHhhhhhhc
Confidence 88899887766544
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.05 E-value=5.7 Score=38.20 Aligned_cols=81 Identities=11% Similarity=0.051 Sum_probs=42.8
Q ss_pred cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC--CCceeeecccccccccCC-CCcccccCC
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE--ENGYPLLVGRMSEVTEGP-FKGHFWAEP 328 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~--~~g~~~~~~~~~~~~~~~-~~g~~~~~~ 328 (383)
.++...++..+- ..+..++++||+++|+|+|+-+..+- ...+.+ +.|+-+... .+.-..+. ..|.++
T Consensus 356 ~iL~h~~v~~fv--tH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~-~~~~~~~~~~~~~~v--- 429 (491)
T PLN02534 356 LILSHPAIGGFL--THCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVE-VPVRWGDEERVGVLV--- 429 (491)
T ss_pred HHhcCCccceEE--ecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccc-ccccccccccccCcc---
Confidence 445555552222 33456799999999999999877321 111212 233222110 00000000 001122
Q ss_pred CHHHHHHHHHHHhc
Q 043412 329 SVDKLRALMRLVVS 342 (383)
Q Consensus 329 ~~~~la~~i~~ll~ 342 (383)
+.+++++++++++.
T Consensus 430 ~~eev~~~v~~~m~ 443 (491)
T PLN02534 430 KKDEVEKAVKTLMD 443 (491)
T ss_pred CHHHHHHHHHHHhc
Confidence 78999999999996
|
|
| >PF12996 DUF3880: DUF based on E | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.41 Score=33.11 Aligned_cols=46 Identities=17% Similarity=0.317 Sum_probs=40.4
Q ss_pred HhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCC
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCD 167 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~ 167 (383)
.....+|.|++.-....+.+++.|.. ++..+|-++|+..+.+....
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~~G~~--~V~yLPLAa~~~~~~p~~~~ 59 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRNLGAE--NVFYLPLAANPERFRPIPVD 59 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHHcCCC--CEEEccccCCHHHhCcccCC
Confidence 34578999999999999999999875 99999999999999887653
|
rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture []. |
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=92.50 E-value=2.7 Score=37.49 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=79.3
Q ss_pred HHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEee
Q 043412 118 HVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVF 197 (383)
Q Consensus 118 ~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g 197 (383)
..+.++++|.+.+=-+...+.+++.|+ ++.+.+. +...-+......... .+.+.+.+.+.
T Consensus 121 ~~~~l~~~~~i~vRD~~S~~~l~~~g~---~i~~~~D---~a~~l~~~~~~~~~~--------------~~~~~i~i~~r 180 (298)
T TIGR03609 121 VRRVLRGCRAISVRDAASYRLLKRLGI---PAELAAD---PVWLLPPEPWPGGEP--------------LPEPVIVVSLR 180 (298)
T ss_pred HHHHHccCCEEEEeCHHHHHHHHHhCC---CceEeCC---hhhhCCCCccccccc--------------CCCCeEEEEEC
Confidence 344589999999988888888888886 4565554 322221111000000 11233333332
Q ss_pred ccc--cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC----C--CCccccccccCceEEecCC
Q 043412 198 KWE--YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD----L--EKPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 198 ~~~--~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~----~--~~~v~~~~~~adi~v~ps~ 269 (383)
.+. .....+.+.+++..+.++. +.+++++......+....+.+.+...... . .+++..+++.||++|....
T Consensus 181 ~~~~~~~~~~~~l~~~l~~l~~~~-g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~Rl 259 (298)
T TIGR03609 181 PWPLLDVSRLLRLLRALDRLQRDT-GAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRL 259 (298)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhh-CCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEech
Confidence 221 1223556777777776553 44555544322222222233333321100 0 1344567899998885554
Q ss_pred CCCCChHHHHHHHcCCCEEEcCC
Q 043412 270 GEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 270 ~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
..++=|+.+|+|+|+-..
T Consensus 260 -----H~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 260 -----HALILAAAAGVPFVALSY 277 (298)
T ss_pred -----HHHHHHHHcCCCEEEeec
Confidence 368899999999997754
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=92.44 E-value=6.7 Score=34.00 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=82.6
Q ss_pred HHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEE
Q 043412 116 PEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLS 195 (383)
Q Consensus 116 ~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~ 195 (383)
..+.+.+++++.+.+=.+...+.+.+.|++. ++.++|..+ + ...+..... ... . . ......+..
T Consensus 119 ~~~~~~l~~~~~i~vRD~~S~~~l~~~g~~~-~~~~~~D~a-f-~l~~~~~~~-~~~---~--~-------~~~~~~~~~ 182 (286)
T PF04230_consen 119 KLLRRILSKADYISVRDEYSYELLKKLGISG-NVKLVPDPA-F-LLPPSYPDE-DKS---K--P-------KRNYISVSN 182 (286)
T ss_pred HHHHHHHhCCCEEEECCHHHHHHHHHcCCCC-CcEEEeCch-h-hcCcccccc-ccc---c--c-------ccceeeecc
Confidence 3455568889998888888888788888876 778887654 1 111111111 000 0 0 001111111
Q ss_pred eeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHh-h-C----------CCCCccccccccCce
Q 043412 196 VFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVE-D-S----------DLEKPDDGWAPAADV 263 (383)
Q Consensus 196 ~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~-~-~----------~~~~~v~~~~~~adi 263 (383)
........-.+.+.+.+..+......+.++....... ............ . . .-.+++..+++.|++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (286)
T PF04230_consen 183 SPSRNNEEYIEEIAELIQRLLDKGYKIVLLPFSPSDD--DEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADL 260 (286)
T ss_pred ccchhhhhHHHHHHHHHHHhhcccceeEEEEeeeccc--hhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCE
Confidence 1122223345566677777766444445544443311 111111111110 0 0 011455688899999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+|.... -..+=|+++|+|+|+-+.
T Consensus 261 ~Is~Rl-----H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 261 VISMRL-----HGAILALSLGVPVIAISY 284 (286)
T ss_pred EEecCC-----HHHHHHHHcCCCEEEEec
Confidence 997665 367889999999998764
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=92.42 E-value=2.3 Score=38.33 Aligned_cols=130 Identities=13% Similarity=0.041 Sum_probs=73.2
Q ss_pred CCcEEEEEeeccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC---CC-----Cccccc
Q 043412 188 SKEFVFLSVFKWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD---LE-----KPDDGW 257 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~---~~-----~~v~~~ 257 (383)
++..+++..|.-.+.|.+ +...+.+..+.++ +.++++.|+++ ...+..++.....+ +. .++..+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~----~e~~~~~~i~~~~~~~~l~g~~sL~el~al 251 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGND----AEKQRAERIAEALPGAVVLPKMSLAEVAAL 251 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCH----HHHHHHHHHHhhCCCCeecCCCCHHHHHHH
Confidence 345666777754566655 5677777777543 57778775441 22222333332221 11 234577
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC-C-CceeeecccccccccCCCCcccccCCCHHHHHH
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRA 335 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~ 335 (383)
++.||++|.... ..+-=|.+.|+|+|+--.+..+..... + +...+... -...-++++..+
T Consensus 252 i~~a~l~I~~DS-----gp~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~-------------~~~~I~~~~V~~ 313 (319)
T TIGR02193 252 LAGADAVVGVDT-----GLTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGE-------------SGANPTPDEVLA 313 (319)
T ss_pred HHcCCEEEeCCC-----hHHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEccC-------------ccCCCCHHHHHH
Confidence 899999997753 245567789999998754433333222 2 11111111 133337888888
Q ss_pred HHHHHh
Q 043412 336 LMRLVV 341 (383)
Q Consensus 336 ~i~~ll 341 (383)
++++++
T Consensus 314 ai~~~~ 319 (319)
T TIGR02193 314 ALEELL 319 (319)
T ss_pred HHHhhC
Confidence 887653
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.02 E-value=3.1 Score=38.63 Aligned_cols=224 Identities=13% Similarity=0.166 Sum_probs=118.4
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
..+.|.+.+.+......+.+ +++..+++..++.+-+-..+........... .+ ..++.+.+..+|++.-.+.
T Consensus 146 ~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~--~~-----~~~~~~~~k~vIlyaPTfr 218 (388)
T COG1887 146 RNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILL--IQ-----LALPLPQDKKVILYAPTFR 218 (388)
T ss_pred eeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHH--Hh-----hhcCCcccCceEEecCCcc
Confidence 46788888888888887666 8888777777666554333333222211110 01 1233567789999988776
Q ss_pred ccc---C---HHH--HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhh----CCC--CCccccccccCceEEe
Q 043412 201 YRK---G---WDV--LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVED----SDL--EKPDDGWAPAADVFVL 266 (383)
Q Consensus 201 ~~K---~---~~~--ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~----~~~--~~~v~~~~~~adi~v~ 266 (383)
... + ... -++.+.+...+ .+..+++.-.. .....+...-.. ..+ ..++..++..+|++|.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~ii~k~Hp-----~is~~~~~~~~~~~~~~~vs~~~di~dll~~sDiLIT 292 (388)
T COG1887 219 DNDVLIGTQFFNLDIDIEKLKEKLGE-NEYVIIVKPHP-----LISDKIDKRYALDDFVLDVSDNADINDLLLVSDILIT 292 (388)
T ss_pred CCccccchhhhhhhhhHHHHHHhhcc-CCeEEEEecCh-----hhhhhhhhhhhccceeEecccchhHHHHHhhhCEEEe
Confidence 553 1 222 33333333221 45666655322 111111111011 112 2467889999999983
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHH
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDE 346 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~ 346 (383)
-++-+..|+|..-+|||.--... .+ ..+..|+..+... ..-|.++. +.+++.++|.....+++.
T Consensus 293 -----DySSv~fdf~~l~KPiify~~D~-~~-y~~~rg~~~d~~~-------~~Pg~~~~--~~~~li~ai~~~~~~~~~ 356 (388)
T COG1887 293 -----DYSSVIFDFMLLDKPIIFYTYDL-EQ-YDELRGFYLDYKF-------EAPGEVVE--TQEELIDAIKPYDEDGNY 356 (388)
T ss_pred -----echHHHHHHHHhcCcEEEEecCh-HH-HHhhhhhhhhHHh-------cCCccccc--cHHHHHHHHHhhhcccch
Confidence 24678999999999999874321 11 1222343333110 00111111 789999999998885543
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 347 AKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 347 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
+.+-.+...+. ...+.-.+..+++.+.+
T Consensus 357 ~~~k~~~~~~~-~~~~~dg~ss~ri~~~i 384 (388)
T COG1887 357 DLEKLRVFNDK-FNSYEDGRSSERILKLI 384 (388)
T ss_pred hHHHHHHHHHh-hcccccccHHHHHHHHH
Confidence 33222222222 23334455555555544
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=91.30 E-value=4.6 Score=38.52 Aligned_cols=59 Identities=19% Similarity=0.204 Sum_probs=35.5
Q ss_pred CCChHHHHHHHcCCCEEEcCCCC----ccccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc
Q 043412 272 GWGRPLVEAMSMGLPVIATNWSG----PTEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342 (383)
Q Consensus 272 ~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~ 342 (383)
+.-++++||+++|+|+|+-+..+ ....+.+ +.|.-+... ...+ .-+.+++++++++++.
T Consensus 361 ~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~--------~~~~----~v~~e~i~~~v~~lm~ 425 (470)
T PLN03015 361 CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSEL--------PSEK----VIGREEVASLVRKIVA 425 (470)
T ss_pred CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccc--------ccCC----ccCHHHHHHHHHHHHc
Confidence 34468999999999999987621 1122212 233222100 0001 1288999999999995
|
|
| >KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=90.95 E-value=8.2 Score=32.02 Aligned_cols=124 Identities=15% Similarity=0.148 Sum_probs=76.6
Q ss_pred CcEEEEEeeccc-cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEec
Q 043412 189 KEFVFLSVFKWE-YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLP 267 (383)
Q Consensus 189 ~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~p 267 (383)
...+++|+|+.. ..+. .|++.++++++..-.+.++..|.. ....+.+..++..++.. -..++++..|
T Consensus 107 ~~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~----~~~~e~l~~fida~N~~------~~gshlv~Vp 174 (259)
T KOG2884|consen 107 KQRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEA----ENNTEKLFEFIDALNGK------GDGSHLVSVP 174 (259)
T ss_pred ceEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEeccc----cccHHHHHHHHHHhcCC------CCCceEEEeC
Confidence 356788888653 2222 788888899888777888888854 23356777777777663 2478888887
Q ss_pred CCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHH
Q 043412 268 SRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVD 345 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~ 345 (383)
.- + +++-...-.|++..+.|+..--.. .+|..++.+ +++.+.-+||-+++--++...
T Consensus 175 pg----~--~L~d~l~ssPii~ge~g~a~~~~~-a~g~~f~fg--------------vdp~~DPELAlALRlSMEEer 231 (259)
T KOG2884|consen 175 PG----P--LLSDALLSSPIIQGEDGGAAAGLG-ANGMDFEFG--------------VDPEDDPELALALRLSMEEER 231 (259)
T ss_pred CC----c--cHHHHhhcCceeccCccccccccc-ccccccccC--------------CCcccCHHHHHHHHhhHHHHH
Confidence 63 2 555566678999987643322221 122222211 223355678988887665433
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=90.54 E-value=1.3 Score=39.04 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=59.9
Q ss_pred cEEEEEeeccccccC--HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC------CCC-----Ccccc
Q 043412 190 EFVFLSVFKWEYRKG--WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS------DLE-----KPDDG 256 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~--~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~------~~~-----~~v~~ 256 (383)
..+.+..|.-.+.|. .+...++++.+.++ ++++++.|+. +..+..+++.+.. .+. .++..
T Consensus 122 ~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~-----~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~ 194 (279)
T cd03789 122 PVVVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGP-----AERELAEEIAAALGGPRVVNLAGKTSLRELAA 194 (279)
T ss_pred CEEEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEech-----hhHHHHHHHHHhcCCCccccCcCCCCHHHHHH
Confidence 455566665445454 46778888777665 7889998865 2233333333221 111 34567
Q ss_pred ccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccc
Q 043412 257 WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEY 298 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~ 298 (383)
+++.||+++.+.. | .+-=|.+.|+|+|+--.+..++.
T Consensus 195 li~~~~l~I~~Ds----g-~~HlA~a~~~p~i~l~g~~~~~~ 231 (279)
T cd03789 195 LLARADLVVTNDS----G-PMHLAAALGTPTVALFGPTDPAR 231 (279)
T ss_pred HHHhCCEEEeeCC----H-HHHHHHHcCCCEEEEECCCCccc
Confidence 8899999997752 2 34455799999988765444443
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=89.79 E-value=1.5 Score=37.77 Aligned_cols=101 Identities=14% Similarity=0.094 Sum_probs=55.4
Q ss_pred CCcEEEEEeeccccccCHHH--HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC--C---C-----Cccc
Q 043412 188 SKEFVFLSVFKWEYRKGWDV--LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD--L---E-----KPDD 255 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~--ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~--~---~-----~~v~ 255 (383)
++..+++..|.-.+.|.+.. ..+.+..+.++. .+++++|+..+ ...+.......... . . .++.
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ 178 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE---QEKEIADQIAAGLQNPVINLAGKTSLRELA 178 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH---HHHHHHHHHHTTHTTTTEEETTTS-HHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH---HHHHHHHHHHHhcccceEeecCCCCHHHHH
Confidence 45677777777667776544 777777776554 78888887611 01233333333322 1 1 3456
Q ss_pred cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccc
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEY 298 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~ 298 (383)
.+++.||++|.+.. -.+-=|.|.|+|+|+--....+..
T Consensus 179 ali~~a~~~I~~Dt-----g~~HlA~a~~~p~v~lfg~t~~~~ 216 (247)
T PF01075_consen 179 ALISRADLVIGNDT-----GPMHLAAALGTPTVALFGPTNPER 216 (247)
T ss_dssp HHHHTSSEEEEESS-----HHHHHHHHTT--EEEEESSS-HHH
T ss_pred HHHhcCCEEEecCC-----hHHHHHHHHhCCEEEEecCCCHHH
Confidence 78899999997763 356668899999998854433333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=89.60 E-value=0.73 Score=37.27 Aligned_cols=74 Identities=11% Similarity=-0.052 Sum_probs=38.1
Q ss_pred HHHHhhhcCCCccEEEecCCCCCCCCcccccCC------CCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEe
Q 043412 58 VELYNTECRTNETVVICHSEPGAWYPPLFDTLP------CPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVP 131 (383)
Q Consensus 58 ~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~ 131 (383)
.....++.+.+||+|+++.+.......++..+. ...+ .+.....-. ......-+..+..+|.+++-
T Consensus 82 ~~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~ki------IyIES~aRv--~~lSlTGklly~~aD~f~VQ 153 (170)
T PF08660_consen 82 LQSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKI------IYIESFARV--KTLSLTGKLLYPFADRFIVQ 153 (170)
T ss_pred HHHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcE------EEEEeeeec--CCCchHHHHHHHhCCEEEEc
Confidence 344456677899999998765533333322222 1111 111111111 11122222224569999999
Q ss_pred ChHHHHHH
Q 043412 132 TDFHVSTF 139 (383)
Q Consensus 132 s~~~~~~~ 139 (383)
-+..++.+
T Consensus 154 W~~l~~~y 161 (170)
T PF08660_consen 154 WEELAEKY 161 (170)
T ss_pred CHHHHhHC
Confidence 88877765
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=89.13 E-value=7.3 Score=35.16 Aligned_cols=96 Identities=9% Similarity=-0.046 Sum_probs=54.6
Q ss_pred cEEEEEeeccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC---CC-----Cccccccc
Q 043412 190 EFVFLSVFKWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD---LE-----KPDDGWAP 259 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~---~~-----~~v~~~~~ 259 (383)
+++++..|.-.+.|.+ +...+.+..+.++ +.++++.++++ ...+..++..+... +. .++..+++
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~----~e~~~~~~i~~~~~~~~l~g~~sL~elaali~ 252 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAE----HEEQRAKRLAEGFPYVEVLPKLSLEQVARVLA 252 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCH----HHHHHHHHHHccCCcceecCCCCHHHHHHHHH
Confidence 4444444443344543 4677777777543 56777763331 12222333322211 11 33567789
Q ss_pred cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 260 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
.||++|.... ..+-=|.|+|+|+|+--.+..+
T Consensus 253 ~a~l~I~nDS-----Gp~HlA~A~g~p~valfGpt~p 284 (322)
T PRK10964 253 GAKAVVSVDT-----GLSHLTAALDRPNITLYGPTDP 284 (322)
T ss_pred hCCEEEecCC-----cHHHHHHHhCCCEEEEECCCCc
Confidence 9999997653 3566688999999987654443
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=88.96 E-value=1.2 Score=40.82 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=59.1
Q ss_pred CcEEEEEeeccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC---CCC-----Ccccccc
Q 043412 189 KEFVFLSVFKWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS---DLE-----KPDDGWA 258 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~---~~~-----~~v~~~~ 258 (383)
+.++++..|.-.+.|.+ +...+.++.+.++ +.+++++|+..+.+....+.+.+.+... .+. .++..++
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~--~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali 260 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQAR--GYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALI 260 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHC--CCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHH
Confidence 45677777765566654 4677777777543 6788888764211111112222211111 111 3456888
Q ss_pred ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 259 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
+.||++|.... ..+-=|.|.|+|+|+--.+..+
T Consensus 261 ~~a~l~v~nDS-----Gp~HlAaA~g~P~v~lfGpt~p 293 (352)
T PRK10422 261 DHAQLFIGVDS-----APAHIAAAVNTPLICLFGATDH 293 (352)
T ss_pred HhCCEEEecCC-----HHHHHHHHcCCCEEEEECCCCc
Confidence 99999997653 3455678999999987544333
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=87.97 E-value=2.6 Score=38.32 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=59.7
Q ss_pred CcEEEEEeec-cccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC--CCC-----Ccccccc
Q 043412 189 KEFVFLSVFK-WEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS--DLE-----KPDDGWA 258 (383)
Q Consensus 189 ~~~~i~~~g~-~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~--~~~-----~~v~~~~ 258 (383)
+.++++..|. ..+.|.+ +...+.++.+.++ +.++++.|+.. +.+..+.+.+..... .+. .++..++
T Consensus 174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~--e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali 249 (334)
T TIGR02195 174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAK--DHPAGNEIEALLPGELRNLAGETSLDEAVDLI 249 (334)
T ss_pred CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChh--hHHHHHHHHHhCCcccccCCCCCCHHHHHHHH
Confidence 4566777765 3456654 4677777776543 57888888752 222223333222110 111 3456888
Q ss_pred ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccc
Q 043412 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTE 297 (383)
Q Consensus 259 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e 297 (383)
+.||++|.... ..+-=|.|.|+|+|+--.+..+.
T Consensus 250 ~~a~l~I~~DS-----Gp~HlAaA~~~P~i~lfG~t~p~ 283 (334)
T TIGR02195 250 ALAKAVVTNDS-----GLMHVAAALNRPLVALYGSTSPD 283 (334)
T ss_pred HhCCEEEeeCC-----HHHHHHHHcCCCEEEEECCCChh
Confidence 99999997653 34556889999999875543333
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
Probab=87.13 E-value=0.78 Score=40.97 Aligned_cols=47 Identities=23% Similarity=0.299 Sum_probs=36.2
Q ss_pred cccccccCceEEecCCCCCCChHHHHHHHcCC-CEEEcCC--CCcccccc
Q 043412 254 DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGL-PVIATNW--SGPTEYLT 300 (383)
Q Consensus 254 v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~-PvI~~~~--~g~~e~v~ 300 (383)
....++.+...+.|.-...+..-+.|||++|| |||.++. -...++++
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ld 279 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLD 279 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccC
Confidence 45667888988888766668889999999998 8998765 34455554
|
Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane |
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=87.04 E-value=2.7 Score=30.34 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=29.3
Q ss_pred cccccccCceEEecCCC---CCCChHHHHHHHcCCCEEEcCCCC
Q 043412 254 DDGWAPAADVFVLPSRG---EGWGRPLVEAMSMGLPVIATNWSG 294 (383)
Q Consensus 254 v~~~~~~adi~v~ps~~---e~~~~~~~Ea~a~G~PvI~~~~~g 294 (383)
+...+..+|++|+++.. ...-.+--+|-..|+|++.++..+
T Consensus 42 l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~ 85 (97)
T PF10087_consen 42 LPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRG 85 (97)
T ss_pred HHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCC
Confidence 45566889999988653 223345567788899999998653
|
|
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=86.55 E-value=20 Score=32.57 Aligned_cols=312 Identities=15% Similarity=0.115 Sum_probs=154.0
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccc-hhhcCCChhhhhHHHHHHhhhcCCCccEEEecCCCC--CCCC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSL-QFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPG--AWYP 83 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~--~~~~ 83 (383)
..|+.--+.-|+.-|++...+..+++.-...++.... ..+...... +..+.... .+.||++=-+..- .| .
T Consensus 17 ~NGi~QN~~fL~~lL~qs~~v~~V~Lvn~g~~~~~~~~~~~~~~~~~----~~~~~~~~--~~lDVlIEmg~ql~~~~-~ 89 (364)
T PF10933_consen 17 ENGINQNCIFLAMLLQQSPRVESVVLVNGGDGNPIPAALMLDLLDVP----LVDFDDAI--DELDVLIEMGAQLDPEW-L 89 (364)
T ss_pred hhchhhHHHHHHHHHhhCCCcceEEEEECCCCCcCCcccccccCCCc----eecHHHhc--ccCCEEEEccCccCHHH-H
Confidence 3577778888999999887766665544333222111 122222211 11122222 2789888765321 12 2
Q ss_pred cccccCCCCCCCCCCCccccc---ceeeeecCCCCHHHHHhcCCCCEEEEeChHHHH---HHHhcCCCCCCeEEecCCCc
Q 043412 84 PLFDTLPCPPTPGYGDFMAVI---GRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVS---TFIRSGVDPAKVVKIVQPVH 157 (383)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~---~~~~~~~~~~~i~vi~ngid 157 (383)
..+....++.+ .|+.-..+. ...++.... .....-...|.|++.-+.... .+.-. ...++.++|.--+
T Consensus 90 ~~~~~~G~KvV-~y~~GndYv~~~E~~lF~k~~---~~~f~~~~yD~VW~lPq~~~~~~~yl~~l--~r~Pv~~vP~iWs 163 (364)
T PF10933_consen 90 DYMRARGGKVV-SYRCGNDYVMDIESMLFNKPS---GHLFNGAPYDEVWTLPQFENTCAPYLETL--HRCPVRVVPHIWS 163 (364)
T ss_pred HHHHHcCCeEE-EEeCCchHHHHhhHHhcCCCC---CccCCCCCCceeEeccchhhhchHHHHHH--hcCCceeeCccCC
Confidence 23344444444 332221111 111111111 111112668889876553332 33332 1236788887655
Q ss_pred CCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCC-eEEEEEeCCCCCCCc
Q 043412 158 VGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG-VVLYLLTNPYHSGRD 236 (383)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~-~~l~i~G~~~~~~~~ 236 (383)
+-++......- . .....+|..- -.+...+-++=-++.-.|.--.-+-+..+.-+..|+ +..+.+..... ..
T Consensus 164 P~F~~~~~~~l-~---~~~~~FGY~p--~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~--~k 235 (364)
T PF10933_consen 164 PRFLDQRIAQL-P---EHGLRFGYQP--GRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH--LK 235 (364)
T ss_pred chhHHHHHHhh-h---hcCCcccccc--CCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh--hh
Confidence 54432211110 0 0011111000 012233333333445556544444445555555665 55555555422 12
Q ss_pred hHHHHHHHHhhCCCC----------Cccc-cccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCce
Q 043412 237 FGNKIVNFVEDSDLE----------KPDD-GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGY 305 (383)
Q Consensus 237 ~~~~~~~~~~~~~~~----------~~v~-~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~ 305 (383)
....+..++..+.+. -++. ++-+..|++|+-.-..+......||+.-|=|.|.... ++.+ +|+
T Consensus 236 e~~~F~~f~~~ldlvr~gkasfegR~~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS~-----~l~d-~GY 309 (364)
T PF10933_consen 236 EHPTFVNFANSLDLVRDGKASFEGRFDFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNSP-----LLKD-VGY 309 (364)
T ss_pred cCHHHHHHHHhhHHhhcCeeEEeeecChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCcc-----hhcc-cCc
Confidence 234555566555542 1222 3447788888666556777789999999999998753 2222 444
Q ss_pred eeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhcCCH
Q 043412 306 PLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVDEAKAKGKQAREDMIQRFSP 364 (383)
Q Consensus 306 ~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s~ 364 (383)
..+..|..+=++++.+++. .....+...+++++.+ .+++.
T Consensus 310 ------------------YY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l-~~~~p 350 (364)
T PF10933_consen 310 ------------------YYPDFDAFEGARQLLRAIREHDADLDAYRARARRLL-DRLSP 350 (364)
T ss_pred ------------------CCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHH-HhhCC
Confidence 3444488888888888776 2333556666666653 33443
|
|
| >COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.41 E-value=1.7 Score=31.07 Aligned_cols=46 Identities=15% Similarity=0.177 Sum_probs=32.1
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccCceEEecCC
Q 043412 224 LYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 224 l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ps~ 269 (383)
+.++|.|-...--....+++..+++|+. +.+..+...+|+++....
T Consensus 5 L~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~v~~~~~~~~~aDiiv~s~~ 58 (93)
T COG3414 5 LAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCAVDEIKALTDGADIIVTSTK 58 (93)
T ss_pred EEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEEecccccCCCcccEEEEehH
Confidence 5566766444444557788899999995 445677788899886643
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=85.22 E-value=3.4 Score=37.72 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=58.4
Q ss_pred CcEEEEEeeccccccC--HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC---CC-----Ccccccc
Q 043412 189 KEFVFLSVFKWEYRKG--WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD---LE-----KPDDGWA 258 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~--~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~---~~-----~~v~~~~ 258 (383)
+..+++..|.-.+.|. .+...+.++.+.++ +.+++++|+....+.+..+.+.+...... +. .++..++
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~--~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali 258 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHAR--GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALI 258 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHH
Confidence 3556666665445554 45667777776543 57888888642111111223322211111 11 3456888
Q ss_pred ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 259 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
+.||++|.... ..+-=|.|.|+|+|+--.+..+
T Consensus 259 ~~a~l~Vs~DS-----Gp~HlAaA~g~p~v~Lfgpt~p 291 (344)
T TIGR02201 259 DHARLFIGVDS-----VPMHMAAALGTPLVALFGPSKH 291 (344)
T ss_pred HhCCEEEecCC-----HHHHHHHHcCCCEEEEECCCCc
Confidence 99999997753 3566688999999987543333
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.48 E-value=22 Score=29.41 Aligned_cols=105 Identities=13% Similarity=0.220 Sum_probs=61.4
Q ss_pred EEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchH-HHHHHHHhhCCCCCccccccccCceEEecCC
Q 043412 191 FVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFG-NKIVNFVEDSDLEKPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 191 ~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~ 269 (383)
+-|+-.|++ |...+++.+..-+..++++.+.++|+|..-+++.. ....+.+++.+- ..=+++.|.-
T Consensus 5 ig~ik~Gni----Gts~v~dlllDErAdRedi~vrVvgsgaKM~Pe~veaav~~~~e~~~p---------Dfvi~isPNp 71 (277)
T COG1927 5 IGFIKCGNI----GTSPVVDLLLDERADREDIEVRVVGSGAKMDPECVEAAVTEMLEEFNP---------DFVIYISPNP 71 (277)
T ss_pred EEEEEeccc----chHHHHHHHHHhhcccCCceEEEeccccccChHHHHHHHHHHHHhcCC---------CEEEEeCCCC
Confidence 346677776 45555655544445578999999999854332222 222223332221 2224556666
Q ss_pred CCCCChHHHHHHH-cCCCEEEc-CCCCc--ccccc-CCCceeee
Q 043412 270 GEGWGRPLVEAMS-MGLPVIAT-NWSGP--TEYLT-EENGYPLL 308 (383)
Q Consensus 270 ~e~~~~~~~Ea~a-~G~PvI~~-~~~g~--~e~v~-~~~g~~~~ 308 (383)
.-+.|-+.-|.++ +|+|+|.- +.+|. .|-++ ++-||++-
T Consensus 72 aaPGP~kARE~l~~s~~PaiiigDaPg~~vkdeleeqGlGYIiv 115 (277)
T COG1927 72 AAPGPKKAREILSDSDVPAIIIGDAPGLKVKDELEEQGLGYIIV 115 (277)
T ss_pred CCCCchHHHHHHhhcCCCEEEecCCccchhHHHHHhcCCeEEEe
Confidence 6777889999988 79996554 44543 33333 36777664
|
|
| >smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
|---|
Probab=83.89 E-value=14 Score=32.16 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 331 DKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 331 ~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
+++.++|+.+.++++..+++++++++.+.+..+.+.+..-+..++.+
T Consensus 202 ~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~e 248 (256)
T smart00672 202 RELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQE 248 (256)
T ss_pred hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 45999999999999999999999999998889999999888887765
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=83.05 E-value=39 Score=31.23 Aligned_cols=187 Identities=12% Similarity=0.106 Sum_probs=90.8
Q ss_pred cCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccc-cCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLA-SIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
++.+..+++=-+...+.++..|++. .... |+...-+......... ... +.....+.+.| +.
T Consensus 150 ~~~~s~i~vRD~~S~~llk~~gi~a---~l~~---D~Af~L~~~~~~~~~~~~~~-----------~~~~~~i~lr~-~~ 211 (385)
T COG2327 150 LGGCSAISVRDPVSYELLKQLGINA---RLVT---DPAFLLPASSQNATASDVEA-----------REKTVAITLRG-LH 211 (385)
T ss_pred hcCCcEEEEecHHhHHHHHHcCCCe---Eeec---Ccceeccccccccccccccc-----------ccceEEEEecc-cC
Confidence 6889999998888889999888752 2222 5443332222111110 000 12233344433 33
Q ss_pred c--ccCH---HHHHHHHHHH-hccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CC--C-----CccccccccCceEEe
Q 043412 201 Y--RKGW---DVLLKAYLEE-FSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DL--E-----KPDDGWAPAADVFVL 266 (383)
Q Consensus 201 ~--~K~~---~~ll~a~~~l-~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~--~-----~~v~~~~~~adi~v~ 266 (383)
+ .+.. ...-+++..+ ......+++...-.+..++-...+.+...+... ++ . +.+...++.+|++|.
T Consensus 212 ~~~t~~~~~~~~v~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg 291 (385)
T COG2327 212 PDNTAQRSILKYVNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVG 291 (385)
T ss_pred CchhhhHHHHHHHHHHHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEe
Confidence 3 2222 1223333332 122234444444333222222222232222211 00 0 122346688898884
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCc-cccccC-C-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcC
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGP-TEYLTE-E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSN 343 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~-~e~v~~-~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~ 343 (383)
.-. .+++=|++.|+|+|+-....= ..+.++ + .++..+. .+.+.+.+.+...+.+.+
T Consensus 292 ~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i----------------~~~~~~~l~~~~~e~~~~ 350 (385)
T COG2327 292 MRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDI----------------DPLDAEILSAVVLERLTK 350 (385)
T ss_pred ehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccC----------------CCCchHHHHHHHHHHHhc
Confidence 432 368889999999999877422 222222 2 2333332 233888888888777764
Q ss_pred -HHHH
Q 043412 344 -VDEA 347 (383)
Q Consensus 344 -~~~~ 347 (383)
++.+
T Consensus 351 ~~~~~ 355 (385)
T COG2327 351 LDELR 355 (385)
T ss_pred cHHHH
Confidence 4433
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=80.81 E-value=4.1 Score=35.78 Aligned_cols=213 Identities=15% Similarity=0.090 Sum_probs=111.8
Q ss_pred HHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEE
Q 043412 116 PEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLS 195 (383)
Q Consensus 116 ~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~ 195 (383)
.+|...-++|-.|+.-...+.+.+.+.|+ +...+.|++- +-..|.+....... .....+-+.
T Consensus 170 pwwlm~~rrc~~vf~rD~~Taq~L~~rgv---na~~vGnpmm-D~L~p~~~~~q~l~--------------~g~~viaLL 231 (412)
T COG4370 170 PWWLMLRRRCWAVFPRDALTAQHLANRGV---NAAYVGNPMM-DGLPPPERDPQLLL--------------TGVPVIALL 231 (412)
T ss_pred hHHHHhcccceeeeccccccHHHHHhcCC---chhhccChhh-ccCCCccCCchhhc--------------cCCceEEec
Confidence 34555568899999988899999999888 4566666542 12233222111000 122333444
Q ss_pred ee-c-cccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC--c---------------ccc
Q 043412 196 VF-K-WEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK--P---------------DDG 256 (383)
Q Consensus 196 ~g-~-~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~---------------v~~ 256 (383)
.| | -+...|+..++.++..+......+.| .+..- ++--...+....+..|.+- + ...
T Consensus 232 PGsR~pea~~nl~~il~slcal~~~~a~vvf--w~ai~--~~lpl~~l~~l~e~~gWq~~ad~~~kdnc~l~lsqqsfad 307 (412)
T COG4370 232 PGSRVPEAQTNLAVILGSLCALPAMFALVVF--WAAIA--PELPLLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSFAD 307 (412)
T ss_pred CCCCChHHHhhHHHHHHHHhhhHHHHHHHHH--HhccC--cCCCHHHHHHHHHhcCcchhhhhhccCceEEEEeHHHHHH
Confidence 44 3 24578888888876665444333222 22110 0111244555566666541 1 112
Q ss_pred ccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccc------cC--CCceeeecccccccccCCCCcccccCC
Q 043412 257 WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYL------TE--ENGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v------~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
++..+|+.+ .--|...-.+...|+|||..+..|.--.- .. ++.+. ....
T Consensus 308 iLH~adaal-----gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~slt------------------lv~~ 364 (412)
T COG4370 308 ILHAADAAL-----GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLT------------------LVRP 364 (412)
T ss_pred HHHHHHHHH-----HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceee------------------ecCC
Confidence 223333322 12355666788899999999874432110 00 11111 1111
Q ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 329 SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 329 ~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
.++.-..+..+++.|++....+..++++++-+- ..+.++.+.+.+
T Consensus 365 ~aq~a~~~~q~ll~dp~r~~air~nGqrRiGqa----Gaa~rIAe~l~e 409 (412)
T COG4370 365 EAQAAAQAVQELLGDPQRLTAIRHNGQRRIGQA----GAARRIAEELGE 409 (412)
T ss_pred chhhHHHHHHHHhcChHHHHHHHhcchhhccCc----chHHHHHHHHHH
Confidence 344444444559999999888888888775443 344555544443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 3e-39
Identities = 52/331 (15%), Positives = 108/331 (32%), Gaps = 39/331 (11%)
Query: 71 VVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWV 130
+V+ +++P L C ++ + + R + + ++ V
Sbjct: 84 IVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVD----LVSKNIRENLWWIFSHPKVVGVMA 139
Query: 131 PTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKE 190
+ +S G + V D + K V ++ + +
Sbjct: 140 MSKCWISDICNYGCK-----VPINIV------SHFVDTKTIYDARKLV----GLSEYNDD 184
Query: 191 FVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH-SGRDFGNKIVNFVEDSD 249
+FL++ + RK D+ + A SK + L N +H S D + + + S
Sbjct: 185 VLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASG 244
Query: 250 LEKPDDGWAP------------------AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291
++ A DV V S GEG+G E +G P+I +
Sbjct: 245 VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISA 304
Query: 292 WSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKG 351
G +Y + + Y + V + G VD L + K G
Sbjct: 305 VGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTF-FKDEKNRKEYG 363
Query: 352 KQAREDMIQRFSPETVAGIVTDHIKDILSSK 382
K+ ++ + + + + ++ + D +L +
Sbjct: 364 KRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 4e-20
Identities = 46/254 (18%), Positives = 91/254 (35%), Gaps = 49/254 (19%)
Query: 134 FHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFV 192
FH+ +++ +D K V I+ P + V ++ I + + ++ +
Sbjct: 181 FHLPEYVQPELDRNKAV-IMPPSIDPLSEKNVELKQTEILRILE-RFDVDP-----EKPI 233
Query: 193 FLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFG-------------- 238
V +++ KG +++ Y + K GV L L+ H +
Sbjct: 234 ITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDY 293
Query: 239 --NKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT 296
+ N + E + A+DV + S EG+G + EAM G PVI G
Sbjct: 294 DVKVLTNLIGVHAREVNA--FQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIK 351
Query: 297 EYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKL-RALMRLVVSNVDEAKAKGKQA 354
+ + E G+ LV ++ ++ L + + + +K G +A
Sbjct: 352 FQIVDGETGF--LV------------------RDANEAVEVVLYL-LKHPEVSKEMGAKA 390
Query: 355 REDMIQRFSPETVA 368
+E + + F
Sbjct: 391 KERVRKNFIITKHM 404
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 3e-19
Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 34/187 (18%)
Query: 191 FVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLL-TNPYHSG-----RDFG-NKIVN 243
F V ++ K VL+KA + +VL L P + G
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKA-VALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEFG 61
Query: 244 FVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGL-PVIATNWSGPTEYLTEE 302
FV ++L + ++V + E +EA+S+G+ PVIA + T +
Sbjct: 62 FVNSNELLE----ILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALD 117
Query: 303 NGYPLLVGRMSEVTEGPFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQR 361
L EP + L A + + N E + + +
Sbjct: 118 ERS--LF-----------------EPNNAKDLSAKIDWWLENKLERERMQNEYAK-SALN 157
Query: 362 FSPETVA 368
++ E
Sbjct: 158 YTLENSV 164
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 2e-18
Identities = 54/262 (20%), Positives = 90/262 (34%), Gaps = 45/262 (17%)
Query: 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGL 181
+D + + + + F + + V V F P + + LG
Sbjct: 138 GTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSAT---RKKLGF 194
Query: 182 SNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLL-TNPYHSG-----R 235
++ V + RKG D L+KA + + L ++ + Y S
Sbjct: 195 TD-----TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLAT 249
Query: 236 DFGNKIV--NFVEDSDLEKPDDGWAPAADVFVLPSR-------GEGWGRPLVEAMSMGLP 286
D + +E D+ AAD+F +P+R EG G +EA + G+P
Sbjct: 250 DVSQNVKFLGRLEYQDMIN----TLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVP 305
Query: 287 VIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDE 346
VIA G E +T G L+V VDKL L+ ++ +
Sbjct: 306 VIAGTSGGAPETVTPATG--LVV----------------EGSDVDKLSELLIELLDDPIR 347
Query: 347 AKAKGKQAREDMIQRFSPETVA 368
A G R + +S E +
Sbjct: 348 RAAMGAAGRAHVEAEWSWEIMG 369
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 1e-15
Identities = 42/258 (16%), Positives = 86/258 (33%), Gaps = 47/258 (18%)
Query: 122 CNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGL 181
+ D V + ++ + F D D+ + K
Sbjct: 154 IEQSDVVTAVSHSLINETHELVKPNKDIQ-----TVYNFIDERVYFKRDMTQLKK----- 203
Query: 182 SNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKI 241
S E + + + + K +++A + L L+ + G +F I
Sbjct: 204 -EYGISESEKILIHISNFRKVKRVQDVVQA-FAKIVTEVDAKLLLVGD----GPEF-CTI 256
Query: 242 VNFVEDSDLEK--------PD-DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292
+ V++ +E + +D+ +L S E +G L+EAM+ G+P I T
Sbjct: 257 LQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRV 316
Query: 293 SGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAK 350
G E + + GY L E + ++ + + +
Sbjct: 317 GGIPEVIQHGDTGY--LC-----------------EVGDTTGVADQAIQLLKDEELHRNM 357
Query: 351 GKQAREDMIQRFSPETVA 368
G++ARE + ++F E +
Sbjct: 358 GERARESVYEQFRSEKIV 375
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 1e-13
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 21/122 (17%)
Query: 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEG 318
AAD+ + P+ E G L+EA++ GLPV+ T G Y+ + G ++
Sbjct: 270 AADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGT--VI--------- 318
Query: 319 PFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377
AEP S ++L ++R ++ A + AR ++ D I
Sbjct: 319 -------AEPFSQEQLNEVLRKALTQSPLRMAWAENARH-YADTQDLYSLPEKAADIITG 370
Query: 378 IL 379
L
Sbjct: 371 GL 372
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 4e-13
Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 55/297 (18%)
Query: 97 YGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPV 156
G + + T+ RV + + V D + + + ++ K +
Sbjct: 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSI--YFPYTEEKRRLTKFHSEI 550
Query: 157 HVGFFDPVNCDPID--LASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLE 214
+ V L KP+L ++ + + K L++ Y +
Sbjct: 551 EELLYSDVENKEHLCVLKDKKKPIL--------------FTMARLDRVKNLSGLVEWYGK 596
Query: 215 EFSKADGVVLYLL------TNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDG- 256
+ L ++ + + + K+ + +E+ L + +G
Sbjct: 597 NTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGE 656
Query: 257 ----WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT-EENGYPLLVGR 311
FV P+ E +G +VEAM+ GLP AT GP E + ++G +
Sbjct: 657 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSG--FHI-- 712
Query: 312 MSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
P+ G A+ L + K + + ++++ + +
Sbjct: 713 ------DPYHGDQAAD----TLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYS 759
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 64.5 bits (158), Expect = 1e-12
Identities = 42/195 (21%), Positives = 66/195 (33%), Gaps = 38/195 (19%)
Query: 174 IGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL------- 226
PV S +LSV + K ++ L+ F K LY+
Sbjct: 8 HSHPV-ETSKFKFKCYGDFWLSVNRIYPEKRIELQLEV----FKKLQDEKLYIVGWFSKG 62
Query: 227 --LTNPYHSGRDFGNKIVNFV-EDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSM 283
V F+ S+ E D + ++ E +G +EAM+
Sbjct: 63 DHAERYARKIMKIAPDNVKFLGSVSEEELID--LYSRCKGLLCTAKDEDFGLTPIEAMAS 120
Query: 284 GLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342
G PVIA N G E + + GY LV V+++ M+ V
Sbjct: 121 GKPVIAVNEGGFKETVINEKTGY--LV-----------------NADVNEIIDAMKKVSK 161
Query: 343 NVDEAKAKG-KQARE 356
N D+ K ++A+E
Sbjct: 162 NPDKFKKDCFRRAKE 176
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 4e-12
Identities = 17/184 (9%), Positives = 54/184 (29%), Gaps = 30/184 (16%)
Query: 202 RKGWDVL---LKAYLEEFSKADGVVLYLL---TNPYHSGRDFGNKIVNFVEDSDLEKPDD 255
R + ++ LK +++++ +++ + + G+ + + D
Sbjct: 254 RNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDIALGKGIHLNSLGKLTLEDYAD--- 310
Query: 256 GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEV 315
+ + + P +E GL VI + N L
Sbjct: 311 -LLKRSSIGISLMISPHPSYPPLEMAHFGLRVITNKYENKDLSNWHSNIVSL-------- 361
Query: 316 TEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375
+ + + + + + + + K++ M+ + + + I
Sbjct: 362 ----------EQLNPENIAETLVELCMSFNNRDVDKKESSN-MMFYINEFNEFSFIKE-I 409
Query: 376 KDIL 379
++ L
Sbjct: 410 EEKL 413
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 8e-12
Identities = 51/256 (19%), Positives = 88/256 (34%), Gaps = 46/256 (17%)
Query: 143 GVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201
DP ++ +V P V + P N + LG+ V V + +
Sbjct: 204 DADPDRIS-VVSPGADVELYSPGNDRA---TERSRRELGIP-----LHTKVVAFVGRLQP 254
Query: 202 RKGWDVLLKAY--LEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK------- 252
KG VL+KA L + + + + P + + E+ +EK
Sbjct: 255 FKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATP-DTYRHMAEELGVEKRIRFLDP 313
Query: 253 -PDD---GWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT-EENGYPL 307
P AAD+ +PS E +G +EA + G PVIA G + E G L
Sbjct: 314 RPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETG--L 371
Query: 308 LVGRMSEVTEGPFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366
LV + S + ++ + + G+ A E + FS
Sbjct: 372 LV-----------------DGHSPHAWADALATLLDDDETRIRMGEDAVEH-ARTFSWAA 413
Query: 367 VAGIVTDHIKDILSSK 382
A ++ D ++++
Sbjct: 414 TAAQLSSLYNDAIANE 429
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 8e-11
Identities = 49/268 (18%), Positives = 88/268 (32%), Gaps = 49/268 (18%)
Query: 143 GVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY 201
D K ++ P V+ FD D I L + + S + +
Sbjct: 217 VEDDDKFS-VIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASS--RLDQ 273
Query: 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK--------------------- 240
+K L++AY++ D L L + + ++
Sbjct: 274 KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDC 333
Query: 241 -----IVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP 295
+ +L A VF L S E +G VEAM+ GLP + T GP
Sbjct: 334 RGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGP 393
Query: 296 TEYLT-EENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354
E L + G +LV P A L++ + + A ++
Sbjct: 394 AEILDGGKYG--VLV--------DPEDPEDIAR-------GLLKA-FESEETWSAYQEKG 435
Query: 355 REDMIQRFSPETVAGIVTDHIKDILSSK 382
++ + +R++ + A + I++I K
Sbjct: 436 KQRVEERYTWQETARGYLEVIQEIADRK 463
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 9e-11
Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 34/179 (18%)
Query: 200 EYRKGWDVLLKAYLEEFSKADGVVLYL-----LTNPYHSGRDFGNKI--VNFVEDSDLEK 252
E RKG VLL A + ++ V + + D + + V+D+
Sbjct: 219 EPRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKAS 278
Query: 253 PDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVG 310
+ADV+ P GE +G LVEAM+ G V+A++ L + + G LV
Sbjct: 279 ----AMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAG--RLV- 331
Query: 311 RMSEVTEGPFKGHFWAEP-SVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
D + A + ++ + +A E + R+ V+
Sbjct: 332 ----------------PVDDADGMAAALIGILEDDQLRAGYVARASE-RVHRYDWSVVS 373
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 1e-08
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 246 EDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGY 305
+ L D + + V PS E WG E MG+P I TN SG Y+ +
Sbjct: 504 NNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIET 563
Query: 306 PLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFS 363
+ + FK + SV++L M V + + A E +
Sbjct: 564 NQAKDYGIYIVDRRFKA---PDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLD 618
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 8e-06
Identities = 16/119 (13%), Positives = 31/119 (26%), Gaps = 34/119 (28%)
Query: 260 AADVFVLPSRG----------EGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLV 309
+A + S+ E + EA G PV+ T E
Sbjct: 231 SAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEI----------- 279
Query: 310 GRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
V + + + D+ R + + R ++ + T+A
Sbjct: 280 -----VPSVGEVVGYGTDFAPDEARRTL--------AGLPASDEVRRAAVRLWGHVTIA 325
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 2e-05
Identities = 57/406 (14%), Positives = 114/406 (28%), Gaps = 99/406 (24%)
Query: 36 HHGDL----QSLQFWEGLPHHMRNLA-------VE------LYNTECRTNETVVICHSEP 78
HH D Q+ + L V+ L E + ++ +
Sbjct: 5 HHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIMSKDAVS 62
Query: 79 GAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFE--TDRVSPEHVKRCNRM-------DFVW 129
G LF TL F+ + R ++ + E + D ++
Sbjct: 63 GTLR--LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 130 ----VPTDFHVS-----TFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
V ++VS +R + + K V + G + GK +
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-ID-G-----------VLGSGKTWVA 167
Query: 181 LSNMNTSS--KEFVFLSVFKW----EYRKGWDVL--LKAYLEEFSKADGVVLYLLTNPYH 232
L + + F +F W VL L+ L + +N
Sbjct: 168 LDVCLSYKVQCKMDF-KIF-WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225
Query: 233 SGRDFGNKIVNFVEDSDLEKP----DDGWAP-AADVF------VLPSR---------GEG 272
++ ++ E + A + F +L +R
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAAT 285
Query: 273 WGRPLVEAMSMGL------PVIATNWSGPTEYLTEE--NGYPLLVGRMSE-VTEGPFKGH 323
++ SM L ++ + L E P + ++E + +G
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD 345
Query: 324 FWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFS--PETV 367
W + DKL ++ ++ ++ A+ + M R S P +
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYR------KMFDRLSVFPPSA 385
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 383 | |||
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.97 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.96 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.95 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.94 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.94 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.94 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.94 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.91 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.89 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.81 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.8 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.79 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.78 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.65 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.64 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.5 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.5 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.4 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.36 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.34 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.3 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.17 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.11 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.01 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 98.98 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.91 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 98.9 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.83 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.78 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 98.69 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 98.53 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 98.27 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.26 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.23 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 97.7 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.37 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.15 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 96.96 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 96.95 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 96.72 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 96.38 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 96.24 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 95.02 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 94.97 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 93.46 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 92.25 |
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=304.13 Aligned_cols=333 Identities=15% Similarity=0.157 Sum_probs=241.2
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCc--cc-ch-hhcCC----------ChhhhhHHHHHHhhhcCCCccE
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDL--QS-LQ-FWEGL----------PHHMRNLAVELYNTECRTNETV 71 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~--~~-~~-~~~~~----------~~~~~~~~~~l~~~~~~~~pDi 71 (383)
..||.+.++.+++++|.++|+...+ .+...... .. .. .+..+ +.........+.+++++.+||+
T Consensus 25 ~~GG~~~~~~~la~~L~~~G~~V~v--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dv 102 (394)
T 2jjm_A 25 SVGGSGVVGTELGKQLAERGHEIHF--ITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDI 102 (394)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEE--ECSSCC----CCCTTEEEECCCCC----CCSCCHHHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE--EeCCCCCcccccCCceEEEecccccccccccccccHHHHHHHHHHHHHcCCCE
Confidence 3699999999999999999975443 22211100 00 00 00111 1122334566778888899999
Q ss_pred EEecCCCCCCCCccccc-C---CCCCCCCCCCcccccceee--eecCCC-CHHHHHhcCCCCEEEEeChHHHHHHHhcCC
Q 043412 72 VICHSEPGAWYPPLFDT-L---PCPPTPGYGDFMAVIGRTM--FETDRV-SPEHVKRCNRMDFVWVPTDFHVSTFIRSGV 144 (383)
Q Consensus 72 V~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~ 144 (383)
||+|+..+......+.. . ..+.+ ...++... ...... .......++.+|.++++|+..++.+.+.+.
T Consensus 103 v~~~~~~~~~~~~~~~~~~~~~~~p~v------~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~ 176 (394)
T 2jjm_A 103 LHVHYAIPHAICAYLAKQMIGERIKIV------TTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVK 176 (394)
T ss_dssp EEECSSTTHHHHHHHHHHHTTTCSEEE------EECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHHHTC
T ss_pred EEEcchhHHHHHHHHHHHhhcCCCCEE------EEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhhC
Confidence 99996543221112111 1 11222 22222111 011112 223334468899999999999999988544
Q ss_pred CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEE
Q 043412 145 DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVL 224 (383)
Q Consensus 145 ~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l 224 (383)
.++++.+||||+|.+.+.+...... +.+++ ++++.++++++|++.+.||++.+++|+..+.++ ++++|
T Consensus 177 ~~~~~~vi~ngv~~~~~~~~~~~~~----~~~~~-------~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l 244 (394)
T 2jjm_A 177 PNKDIQTVYNFIDERVYFKRDMTQL----KKEYG-------ISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKL 244 (394)
T ss_dssp CSSCEEECCCCCCTTTCCCCCCHHH----HHHTT-------CC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEE
T ss_pred CcccEEEecCCccHHhcCCcchHHH----HHHcC-------CCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEE
Confidence 4679999999999987765432110 11111 246678999999999999999999999999876 67999
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhCCC---------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDSDL---------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+++|+| +..+.++++++++++ .+++..+|+.||++++||..|++|++++|||+||+|||+++.++.
T Consensus 245 ~i~G~g-----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~ 319 (394)
T 2jjm_A 245 LLVGDG-----PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGI 319 (394)
T ss_dssp EEECCC-----TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTS
T ss_pred EEECCc-----hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCCh
Confidence 999987 456778888777665 366788999999999999999999999999999999999999999
Q ss_pred cccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 296 TEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 296 ~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
.|++.++ +|++++++ |+++++++|.++++|++.+++|++++++.+.++|||+.+++++.++
T Consensus 320 ~e~v~~~~~g~~~~~~------------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 381 (394)
T 2jjm_A 320 PEVIQHGDTGYLCEVG------------------DTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETI 381 (394)
T ss_dssp TTTCCBTTTEEEECTT------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHhhcCCceEEeCCC------------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999885 88888776 9999999999999999999999999999887999999999999999
Q ss_pred HHHHHhc
Q 043412 375 IKDILSS 381 (383)
Q Consensus 375 ~~~~~~~ 381 (383)
|++++.+
T Consensus 382 ~~~~~~~ 388 (394)
T 2jjm_A 382 YYDVLRD 388 (394)
T ss_dssp HHHTC--
T ss_pred HHHHHhh
Confidence 9998764
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=305.12 Aligned_cols=347 Identities=16% Similarity=0.121 Sum_probs=245.6
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcc-------cchh---hcCCChhhhhHHHHHHhhhcCCCccEEEecC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ-------SLQF---WEGLPHHMRNLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
.||.++++..++++|.+. +...+ +.....+... .... ...+.. .......+.+.+++.+||+||+|+
T Consensus 13 ~gG~~~~~~~l~~~L~~~-~~V~v-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~Div~~~~ 89 (413)
T 3oy2_A 13 PSGYGRVMRAIVPRISKA-HEVIV-FGIHAFGRSVHANIEEFDAQTAEHVRGLNE-QGFYYSGLSEFIDVHKPDIVMIYN 89 (413)
T ss_dssp CSHHHHHHHHHHHHHTTT-SEEEE-EEESCCSCCSCSSSEEEEHHHHHHHTTCCS-TTCCHHHHHHHHHHHCCSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhc-CCeEE-EeecCCCcccccccccCCcccccccccccc-ccchHHHHHHHHHhcCCCEEEEcc
Confidence 599999999999999998 65443 2222222110 0000 111110 012334566677888999999994
Q ss_pred CCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCC--EEEEeChHHHHHHHhcCCCCCCeEEecC
Q 043412 77 EPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMD--FVWVPTDFHVSTFIRSGVDPAKVVKIVQ 154 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vi~~s~~~~~~~~~~~~~~~~i~vi~n 154 (383)
....+ ...+........ ........+.. ...........++++| .++++|+..++.+.+++. +.++.+|||
T Consensus 90 ~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~~~~~~~-~~~~~vi~n 162 (413)
T 3oy2_A 90 DPIVI-GNYLLAMGKCSH-RTKIVLYVDLV----SKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYGC-KVPINIVSH 162 (413)
T ss_dssp CHHHH-HHHHHHGGGCCS-CCEEEEEECCC----SBSCCGGGGGGGGCTTEEEEEESSTHHHHHHHHTTC-CSCEEECCC
T ss_pred hHHHH-HHHHHHhccCCC-CCceeeecccc----chhhHHHHHHHHhccCCceEEEcCHHHHHHHHHcCC-CCceEEeCC
Confidence 32211 111111111110 00000111111 1112222344578888 999999999999999877 579999999
Q ss_pred CCcCCCCCCCCCCCCccccCCccccccCCCCCCC--CcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 155 PVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSS--KEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 155 gid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|+|.+.+... +.+.+ +++ +.++++++|++.++||++.+++|+..+.++.|+++|+|+|+|+.
T Consensus 163 gvd~~~~~~~---------~~~~~-------~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~ 226 (413)
T 3oy2_A 163 FVDTKTIYDA---------RKLVG-------LSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHH 226 (413)
T ss_dssp CCCCCCCTTH---------HHHTT-------CGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCT
T ss_pred CCCHHHHHHH---------HHhcC-------CCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcc
Confidence 9999877111 11111 234 68999999999999999999999999999999999999999864
Q ss_pred C-CCchHHHHHHHHhhCCCCC------------------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 233 S-GRDFGNKIVNFVEDSDLEK------------------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 233 ~-~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
. .....+.++++++++++.+ ++..+|+.||++|+||.+|+||++++|||+||+|||+|+.+
T Consensus 227 ~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~ 306 (413)
T 3oy2_A 227 ESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG 306 (413)
T ss_dssp TCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH
T ss_pred cchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC
Confidence 2 2234577788777776553 45678899999999999999999999999999999999999
Q ss_pred CccccccCCCceeeecccccccccCCCCcc--cccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 043412 294 GPTEYLTEENGYPLLVGRMSEVTEGPFKGH--FWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 294 g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~--~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
|..|++.++..++++..... ..++.+|+ ++++.|+++++++| ++++|++.+++|++++++.+.++|||+.+++++
T Consensus 307 g~~e~v~~~~~~~i~~~~~~--~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~ 383 (413)
T 3oy2_A 307 GADDYFSGDCVYKIKPSAWI--SVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDI 383 (413)
T ss_dssp HHHHHSCTTTSEEECCCEEE--ECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred ChHHHHccCccccccccccc--ccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999998866555543211 12223466 77777999999999 999999999999999999988899999999999
Q ss_pred HHHHHHHHhcc
Q 043412 372 TDHIKDILSSK 382 (383)
Q Consensus 372 ~~~~~~~~~~~ 382 (383)
.++|+++++++
T Consensus 384 ~~~~~~~~~~~ 394 (413)
T 3oy2_A 384 IDFFNSLLRVE 394 (413)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHHhhc
Confidence 99999998653
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=310.79 Aligned_cols=236 Identities=17% Similarity=0.129 Sum_probs=196.8
Q ss_pred HHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCC----CccccCCccccccCCCCCCCCcE
Q 043412 117 EHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDP----IDLASIGKPVLGLSNMNTSSKEF 191 (383)
Q Consensus 117 ~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~ 191 (383)
.....++.+|.++++|+..++.... ++.++.++.+||||+|.+.|.+..... .....+.+.+ ++++ +
T Consensus 181 ~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~ 252 (439)
T 3fro_A 181 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG-------MDEG-V 252 (439)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHT-------CCSC-E
T ss_pred HhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcC-------CCCC-c
Confidence 3444568899999999999988554 456778999999999999887653211 0001111222 3455 9
Q ss_pred EEEEeeccc-cccCHHHHHHHHHHHhccC--CCeEEEEEeCCCCCCCchHHHHHHHHhhCC--------C-CCccccccc
Q 043412 192 VFLSVFKWE-YRKGWDVLLKAYLEEFSKA--DGVVLYLLTNPYHSGRDFGNKIVNFVEDSD--------L-EKPDDGWAP 259 (383)
Q Consensus 192 ~i~~~g~~~-~~K~~~~ll~a~~~l~~~~--~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~--------~-~~~v~~~~~ 259 (383)
+++++|++. +.||++.+++|++.+.++. ++++|+++|+|+ ..+.+.++++++.++ + .+++..+|+
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~---~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD---PELEGWARSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC---HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCC---hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 999999999 9999999999999998877 899999999883 234478888887765 1 144678999
Q ss_pred cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 260 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
.||++|+||..|++|++++|||+||+|||+|+.++..|++.+++|++++++ |+++++++|.+
T Consensus 330 ~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~~g~~~~~~------------------d~~~la~~i~~ 391 (439)
T 3fro_A 330 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAG------------------DPGELANAILK 391 (439)
T ss_dssp TCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTTTCEEECTT------------------CHHHHHHHHHH
T ss_pred HCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcCceEEeCCC------------------CHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888888877 99999999999
Q ss_pred Hhc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 340 VVS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 340 ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
+++ |++.+++|++++++.+ ++|||+.+++++.++|+++++++
T Consensus 392 ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 392 ALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp HHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999987 77999999999999999988765
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=299.97 Aligned_cols=233 Identities=20% Similarity=0.200 Sum_probs=194.3
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
++.+|.++++|+..++.+.+ +|++.+++.+||||+|.+.+.+...... ...+.+++ ++++.++++++|++.
T Consensus 182 ~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~-~~~r~~~~-------~~~~~~~i~~~G~~~ 253 (438)
T 3c48_A 182 VDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRAT-ERSRRELG-------IPLHTKVVAFVGRLQ 253 (438)
T ss_dssp HHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----C-HHHHHHTT-------CCSSSEEEEEESCBS
T ss_pred HhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchh-hhhHHhcC-------CCCCCcEEEEEeeec
Confidence 68899999999999999988 8888889999999999988766533210 00111222 356789999999999
Q ss_pred cccCHHHHHHHHHHHhccCC--CeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEec
Q 043412 201 YRKGWDVLLKAYLEEFSKAD--GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLP 267 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~--~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~p 267 (383)
+.||++.+++|+..+.++.| +++|+++|+... ..+..+.++++++++++. +++..+|+.||++|+|
T Consensus 254 ~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~-~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~p 332 (438)
T 3c48_A 254 PFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSG-PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVP 332 (438)
T ss_dssp GGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEEC
T ss_pred ccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCC-CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEEC
Confidence 99999999999999988877 899999998211 115567788888877764 3456888999999999
Q ss_pred CCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHH
Q 043412 268 SRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDE 346 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~ 346 (383)
|..|+||++++|||+||+|||+++.++..|++.++ +|+++++. |+++++++|.++++|++.
T Consensus 333 s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~------------------d~~~la~~i~~l~~~~~~ 394 (438)
T 3c48_A 333 SFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGH------------------SPHAWADALATLLDDDET 394 (438)
T ss_dssp CSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSC------------------CHHHHHHHHHHHHHCHHH
T ss_pred ccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCC------------------CHHHHHHHHHHHHcCHHH
Confidence 99999999999999999999999999999999885 78888766 999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 347 AKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 347 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
+.+|++++++.+.+ |+|+.+++++.++|++++.++
T Consensus 395 ~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 395 RIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhc
Confidence 99999999998777 999999999999999998653
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=301.53 Aligned_cols=245 Identities=18% Similarity=0.154 Sum_probs=190.7
Q ss_pred HHhcCCCCEEEEeChHHHHHHHh-cC--------CCCCCeEEecCCCcCCCCCCCCCCCCccccCC----------cccc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIR-SG--------VDPAKVVKIVQPVHVGFFDPVNCDPIDLASIG----------KPVL 179 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~-~~--------~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~----------~~~l 179 (383)
+..+..||.|+++|+..++.+.+ ++ ....++.+|+||||.+.|.|............ +..+
T Consensus 236 k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l 315 (536)
T 3vue_A 236 KAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEAL 315 (536)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHH
Confidence 34467899999999999998876 33 23568999999999999988654322211000 0000
Q ss_pred c-cCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-------
Q 043412 180 G-LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------- 251 (383)
Q Consensus 180 ~-~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------- 251 (383)
. ..++..+++.++|+++||+.++||++.+++|+.++.++ +.+++++|.|. ......++.....++..
T Consensus 316 ~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~---~~~~~~~~~~~~~~~~~v~~~~~~ 390 (536)
T 3vue_A 316 QAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGK---KKFEKLLKSMEEKYPGKVRAVVKF 390 (536)
T ss_dssp HHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBC---HHHHHHHHHHHHHSTTTEEEECSC
T ss_pred HHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccC---chHHHHHHHHHhhcCCceEEEEec
Confidence 0 01223457889999999999999999999999999764 67888999873 24455566665555432
Q ss_pred --CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCC
Q 043412 252 --KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 252 --~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
+++..+|+.||++|+||++|+||++++|||+||+|||+|+.||.+|+|.++ +|+.+... ..+|.++++.
T Consensus 391 ~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~--------~~~g~l~~~~ 462 (536)
T 3vue_A 391 NAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRL--------SVDCKVVEPS 462 (536)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCC--------CSCTTCCCHH
T ss_pred cHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccC--------CCceeEECCC
Confidence 334678999999999999999999999999999999999999999999996 99987643 3678899999
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 329 SVDKLRALMRLVVS--NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 329 ~~~~la~~i~~ll~--~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
|+++|+++|.++++ +.+.+++|++++ +.++|||++++++|.++|+++.
T Consensus 463 d~~~la~ai~ral~~~~~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 463 DVKKVAATLKRAIKVVGTPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHHHHHHHTTSHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhcCcHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence 99999999998876 455577777776 4578999999999999999863
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=297.62 Aligned_cols=335 Identities=17% Similarity=0.129 Sum_probs=244.4
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchh-------hc----CCChhhhhHHHHHHhhhcCCCccEEEec
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQF-------WE----GLPHHMRNLAVELYNTECRTNETVVICH 75 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~l~~~~~~~~pDiV~~~ 75 (383)
.||.++++.++++.| .|+... +.....+......+ +. ............+.+++++.+||+||+|
T Consensus 18 ~gG~~~~~~~l~~~L--~g~~v~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Dvv~~~ 93 (394)
T 3okp_A 18 IGGIQSYLRDFIATQ--DPESIV--VFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAEIIREREIDNVWFG 93 (394)
T ss_dssp CSHHHHHHHHHHTTS--CGGGEE--EEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHHHHHHTTCSEEEES
T ss_pred cchHHHHHHHHHHHh--cCCeEE--EEECCCCccchhhhccccceEEEEccccccccchhhHHHHHHHHHhcCCCEEEEC
Confidence 699999999999999 355433 33332221100000 00 1111233566788889999999999999
Q ss_pred CCCCCCCCccc-ccCCCCCCCCCCCcccccceeee-ecCC-CCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEe
Q 043412 76 SEPGAWYPPLF-DTLPCPPTPGYGDFMAVIGRTMF-ETDR-VSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKI 152 (383)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi 152 (383)
..........+ .....+.+ +...++.... .... ........++.+|.++++|+..++.+.+.+.+..++.+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~-----i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi 168 (394)
T 3okp_A 94 AAAPLALMAGTAKQAGASKV-----IASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHL 168 (394)
T ss_dssp SCTTGGGGHHHHHHTTCSEE-----EEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEEC
T ss_pred CcchHHHHHHHHHhcCCCcE-----EEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEe
Confidence 75443222221 12222212 1122221111 0011 112233346889999999999999999844355799999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|||+|.+.+.+...... ...+.+++ ++++.++++++|++.+.||++.+++|+..+.++.++++|+++|+|
T Consensus 169 ~ngv~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g-- 238 (394)
T 3okp_A 169 PSGVDVKRFTPATPEDK-SATRKKLG-------FTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSG-- 238 (394)
T ss_dssp CCCBCTTTSCCCCHHHH-HHHHHHTT-------CCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCC--
T ss_pred cCCcCHHHcCCCCchhh-HHHHHhcC-------CCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCc--
Confidence 99999988876332110 01111222 356779999999999999999999999999998999999999987
Q ss_pred CCCchHHHHHHHHhh-------CCCC--CccccccccCceEEecCCC-------CCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 233 SGRDFGNKIVNFVED-------SDLE--KPDDGWAPAADVFVLPSRG-------EGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~-------~~~~--~~v~~~~~~adi~v~ps~~-------e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
+..+.+++++.. .|.. +++..+|+.||++++||.. |++|++++|||++|+|||+++.++..
T Consensus 239 ---~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~ 315 (394)
T 3okp_A 239 ---RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP 315 (394)
T ss_dssp ---TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG
T ss_pred ---hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChH
Confidence 556777776632 2333 5678899999999999999 99999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 297 EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 297 e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
|++.+++|++++++ |+++++++|.++++|++.+++|++++++.+.++|||+.+++++.++|+
T Consensus 316 e~i~~~~g~~~~~~------------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 377 (394)
T 3okp_A 316 ETVTPATGLVVEGS------------------DVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQ 377 (394)
T ss_dssp GGCCTTTEEECCTT------------------CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred HHHhcCCceEeCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99988888888876 999999999999999999999999999998889999999999999999
Q ss_pred HHHhc
Q 043412 377 DILSS 381 (383)
Q Consensus 377 ~~~~~ 381 (383)
++.++
T Consensus 378 ~~~r~ 382 (394)
T 3okp_A 378 SEPRK 382 (394)
T ss_dssp SCCC-
T ss_pred HhccC
Confidence 87643
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-39 Score=299.42 Aligned_cols=338 Identities=16% Similarity=0.131 Sum_probs=234.7
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCccc-----chhhc-----CCChhhh----hHHHHHHhhhcCC
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQS-----LQFWE-----GLPHHMR----NLAVELYNTECRT 67 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~----~~~~~l~~~~~~~ 67 (383)
++.+..||.++++.++++.|.+.|+...+.. ....+.... ...+. .++.... .....+.+++++.
T Consensus 47 ~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (416)
T 2x6q_A 47 NSTSFGGGVAEILHSLVPLLRSIGIEARWFV-IEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLS 125 (416)
T ss_dssp ESCSSSSTHHHHHHHHHHHHHHTTCEEEEEE-CCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHHHHHHSSCGG
T ss_pred eCCCCCCCHHHHHHHHHHHHHhCCCeEEEEE-ccCCcchhhhhcccceeecccccccccHHHHHHHHHHHHHHHHHHhhc
Confidence 3456789999999999999999987654322 111111110 00011 1221111 1223456677888
Q ss_pred CccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEE-EeChHHHHHHHhcCCCC
Q 043412 68 NETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVW-VPTDFHVSTFIRSGVDP 146 (383)
Q Consensus 68 ~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi-~~s~~~~~~~~~~~~~~ 146 (383)
+||+||+|+........++... .+.+ .+.++............+.+.+.++|.++ ++|+..++ +++.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~~-~p~v------~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-----~~~~ 193 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEKK-SPWL------WRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQP-----ELDR 193 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCCC-SCEE------EECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGGGSCT-----TSCT
T ss_pred CCCEEEEeccchhhHHHHHHhc-CCEE------EEEccccCCccHHHHHHHHHHHHhCCEEEEechHHHHh-----hCCc
Confidence 9999999976553333222211 1111 22222111000001122334467888877 55554443 3344
Q ss_pred CCeEEecCCCcCCCCCCCCCCCCc-cccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEE
Q 043412 147 AKVVKIVQPVHVGFFDPVNCDPID-LASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLY 225 (383)
Q Consensus 147 ~~i~vi~ngid~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~ 225 (383)
.++.+||||+|...+.+....... ...+.++ +++++.++++++|++.+.||++.+++|+..+.++.|+++|+
T Consensus 194 ~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~-------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~ 266 (416)
T 2x6q_A 194 NKAVIMPPSIDPLSEKNVELKQTEILRILERF-------DVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLL 266 (416)
T ss_dssp TTEEECCCCBCTTSTTTSCCCHHHHHHHHHHT-------TCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEE
T ss_pred cceEEeCCCCChhhhcccccChhhHHHHHHHh-------CCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEE
Confidence 689999999998766543221100 0011112 23567889999999999999999999999999889999999
Q ss_pred EEeCCCCCCCchHHHHHHHHhhCCCCC--------------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 226 LLTNPYHSGRDFGNKIVNFVEDSDLEK--------------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 226 i~G~~~~~~~~~~~~~~~~~~~~~~~~--------------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
++|+|+..++...+.++++++.+++.+ ++..+|+.||++|+||..|+||++++|||+||+|||+++
T Consensus 267 i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~ 346 (416)
T 2x6q_A 267 LVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRA 346 (416)
T ss_dssp EEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEES
T ss_pred EEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEcc
Confidence 999985433344566777777766542 456788999999999999999999999999999999999
Q ss_pred CCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 292 WSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 292 ~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
.+|..|++.++ +|++++ |+++++++|.++++|++.+++|++++++.+.++|||+.++++
T Consensus 347 ~~g~~e~i~~~~~g~l~~--------------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~ 406 (416)
T 2x6q_A 347 VGGIKFQIVDGETGFLVR--------------------DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMER 406 (416)
T ss_dssp CHHHHHHCCBTTTEEEES--------------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHH
T ss_pred CCCChhheecCCCeEEEC--------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 99999999875 777776 899999999999999999999999999998889999999999
Q ss_pred HHHHHHHHH
Q 043412 371 VTDHIKDIL 379 (383)
Q Consensus 371 ~~~~~~~~~ 379 (383)
+.++|++++
T Consensus 407 ~~~~~~~l~ 415 (416)
T 2x6q_A 407 YLDILNSLG 415 (416)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHhh
Confidence 999998765
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=307.48 Aligned_cols=237 Identities=19% Similarity=0.186 Sum_probs=194.4
Q ss_pred hcCCCCEEEEeChHHHHHHHhc---C-C----CCCCeEEecCCCcCCCCCCCCCCCCccccCCccc-----cccCCCCCC
Q 043412 121 RCNRMDFVWVPTDFHVSTFIRS---G-V----DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPV-----LGLSNMNTS 187 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~~---~-~----~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~-----l~~~~~~~~ 187 (383)
.++.+|.++++|+..++.+.+. | + +++++.+||||+|.+.|.+..........+.+++ + +
T Consensus 187 ~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~-------~ 259 (499)
T 2r60_A 187 TMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSE-------R 259 (499)
T ss_dssp HHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGG-------G
T ss_pred HHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhccccccc-------C
Confidence 3688999999999999988764 6 5 6789999999999988766432100000011111 2 3
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCC-eEEEEEeCCCCC----------CCchHHHHHHHHhhCCCCC----
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG-VVLYLLTNPYHS----------GRDFGNKIVNFVEDSDLEK---- 252 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~-~~l~i~G~~~~~----------~~~~~~~~~~~~~~~~~~~---- 252 (383)
++.++|+++|++.+.||++.+++|+..+.++.++ ++++++|+.... +.++.+.++++++++++.+
T Consensus 260 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 260 MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 5678899999999999999999999998776554 589999983211 0112788888998887753
Q ss_pred -------ccccccccC----ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCC
Q 043412 253 -------PDDGWAPAA----DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPF 320 (383)
Q Consensus 253 -------~v~~~~~~a----di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~ 320 (383)
++..+|+.| |++|+||..|+||++++|||+||+|||+|+.+|..|++.++ +|++++++
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~---------- 409 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPE---------- 409 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTT----------
T ss_pred CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCC----------
Confidence 456888999 99999999999999999999999999999999999999886 88888876
Q ss_pred CcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 321 KGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 321 ~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
|+++++++|.++++|++.+++|++++++.+.++|||+.+++++.++|++++.++
T Consensus 410 --------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 410 --------DPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp --------CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred --------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999998888999999999999999998653
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=292.45 Aligned_cols=337 Identities=16% Similarity=0.100 Sum_probs=237.6
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCCh-------hhhhHHHHHHhhhcCCCccEEEecCCC
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPH-------HMRNLAVELYNTECRTNETVVICHSEP 78 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~pDiV~~~~~~ 78 (383)
..||.++++.+++++|.++|+...+... ...+...+.-.+..++. ........+.+++++.+||+||+|+..
T Consensus 12 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~ 90 (374)
T 2iw1_A 12 PFGGLQRDFMRIASTVAARGHHVRVYTQ-SWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKM 90 (374)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCEEEEES-EECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCCSEEEESSCC
T ss_pred CCcchhhHHHHHHHHHHhCCCeEEEEec-CCCCCCCCCcEEEEEccCcccchhhHHHHHHHHHHHHhccCCCEEEEecCC
Confidence 4599999999999999999986654222 11221111101111221 122334567778888999999999754
Q ss_pred CCCCCcccccCCCCCCCCCCCcccccceeeeecC--CCCHHHHH-hc--CCCCEEEEeChHHHHHHHh-cCCCCCCeEEe
Q 043412 79 GAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETD--RVSPEHVK-RC--NRMDFVWVPTDFHVSTFIR-SGVDPAKVVKI 152 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~--~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi 152 (383)
..+...+. ...+. .......++....... .....+.+ .+ +.+|.++++|+..++.+.+ ++.++.++.++
T Consensus 91 ~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi 165 (374)
T 2iw1_A 91 PGLDVYFA-ADVCY----AEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQIL 165 (374)
T ss_dssp TTCSEEEC-CSCCH----HHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCceeeec-ccccc----ceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEe
Confidence 43221111 11110 0001111111100000 00001111 12 4799999999999999988 78888899999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhcc-CCCeEEEEEeCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSK-ADGVVLYLLTNPY 231 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~-~~~~~l~i~G~~~ 231 (383)
|||+|.+.+.+..........+.+++ ++++.++++++|++.+.||++.+++|+..+.++ .++++|+++|+++
T Consensus 166 ~ngv~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~ 238 (374)
T 2iw1_A 166 PPGIYPDRKYSEQIPNSREIYRQKNG-------IKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK 238 (374)
T ss_dssp CCCCCGGGSGGGSCTTHHHHHHHHTT-------CCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC
T ss_pred cCCcCHHhcCcccchhHHHHHHHHhC-------CCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCC
Confidence 99999988766543221111112222 356789999999999999999999999988766 5799999999873
Q ss_pred CCCCchHHHHHHHHhhCCC---------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC-
Q 043412 232 HSGRDFGNKIVNFVEDSDL---------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE- 301 (383)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~- 301 (383)
.+.++++++.+++ .+++..+|+.||++++||..|++|++++|||+||+|||+++.++..|++.+
T Consensus 239 ------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~ 312 (374)
T 2iw1_A 239 ------PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA 312 (374)
T ss_dssp ------CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH
T ss_pred ------HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccC
Confidence 2455555555443 467789999999999999999999999999999999999999999999987
Q ss_pred CCceeee-cccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 302 ENGYPLL-VGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 302 ~~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++|++++ ++ |+++++++|.++++|++.+++|++++++.+ ++|+|+.+++++.++++..+.
T Consensus 313 ~~g~~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 313 NCGTVIAEPF------------------SQEQLNEVLRKALTQSPLRMAWAENARHYA-DTQDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp TCEEEECSSC------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHSCCSCHHHHHHHHHHCC--
T ss_pred CceEEeCCCC------------------CHHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHhhc
Confidence 5888886 55 999999999999999999999999999975 567999999999999887653
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=297.59 Aligned_cols=230 Identities=16% Similarity=0.165 Sum_probs=186.3
Q ss_pred HHhcCCCCEEEEeChHHHHHHHh--cC--------CCCCCeEEecCCCcCCCCCCCCCCCC---------------cccc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIR--SG--------VDPAKVVKIVQPVHVGFFDPVNCDPI---------------DLAS 173 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~--~~--------~~~~~i~vi~ngid~~~~~~~~~~~~---------------~~~~ 173 (383)
...++.+|.++++|+..++.+.+ +| .++.++.+||||+|.+.|.+...... ....
T Consensus 201 ~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 1rzu_A 201 KGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAV 280 (485)
T ss_dssp HHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHH
T ss_pred HHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHH
Confidence 34468899999999999998876 34 35679999999999988876543210 0000
Q ss_pred CCccccccCCCCCCCC-cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC---
Q 043412 174 IGKPVLGLSNMNTSSK-EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD--- 249 (383)
Q Consensus 174 ~~~~~l~~~~~~~~~~-~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~--- 249 (383)
+.+++ ++++ .++++++||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.+.++++++.++
T Consensus 281 r~~~~-------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~---~~~~~~l~~~~~~~~~~v 348 (485)
T 1rzu_A 281 AEHFR-------IDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGD---VALEGALLAAASRHHGRV 348 (485)
T ss_dssp HHHHT-------CCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBC---HHHHHHHHHHHHHTTTTE
T ss_pred HHhcC-------CCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCc---hHHHHHHHHHHHhCCCcE
Confidence 11112 2343 6799999999999999999999999876 489999999872 235677777776653
Q ss_pred -----CCCc-cccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC----------CCceeeeccccc
Q 043412 250 -----LEKP-DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE----------ENGYPLLVGRMS 313 (383)
Q Consensus 250 -----~~~~-v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~----------~~g~~~~~~~~~ 313 (383)
..++ +..+|+.||++|+||.+|+||++++|||+||+|||+|+.+|..|++.+ .+|++++++
T Consensus 349 ~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~--- 425 (485)
T 1rzu_A 349 GVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPV--- 425 (485)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSC---
T ss_pred EEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCC---
Confidence 2222 358899999999999999999999999999999999999999999987 477777766
Q ss_pred ccccCCCCcccccCCCHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 314 EVTEGPFKGHFWAEPSVDKLRALMRLVV---SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 314 ~~~~~~~~g~~~~~~~~~~la~~i~~ll---~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
|+++++++|.+++ +|++.+++|++++++ ++|||+.+++++.++|++++.+
T Consensus 426 ---------------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~~~~ 478 (485)
T 1rzu_A 426 ---------------TLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQLISK 478 (485)
T ss_dssp ---------------SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHHTC-
T ss_pred ---------------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHHhhCC
Confidence 9999999999999 799999999999864 7999999999999999998764
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=290.81 Aligned_cols=230 Identities=15% Similarity=0.083 Sum_probs=185.0
Q ss_pred HHhcCCCCEEEEeChHHHHHHHh--cCCC--------C--CCeEEecCCCcCCCCCCCCCCCC---------------cc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIR--SGVD--------P--AKVVKIVQPVHVGFFDPVNCDPI---------------DL 171 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~--~~~~--------~--~~i~vi~ngid~~~~~~~~~~~~---------------~~ 171 (383)
...++.+|.++++|+..++.+.+ +|.. + .++.+||||+|.+.|.+...... ..
T Consensus 199 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 2qzs_A 199 KAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKR 278 (485)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHH
T ss_pred HHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHH
Confidence 34468899999999999998865 3432 2 68999999999988876543110 00
Q ss_pred ccCCccccccCCCCCCC--CcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC
Q 043412 172 ASIGKPVLGLSNMNTSS--KEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD 249 (383)
Q Consensus 172 ~~~~~~~l~~~~~~~~~--~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~ 249 (383)
..+.+++ +++ +.++++++||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+.+.+++++..++
T Consensus 279 ~~r~~~~-------~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~---~~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 279 QLQIAMG-------LKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGD---PVLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHHT-------CCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEEC---HHHHHHHHHHHHHST
T ss_pred HHHHHcC-------CCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCc---hHHHHHHHHHHHhCC
Confidence 0011112 233 67899999999999999999999999876 489999999872 135677887777654
Q ss_pred --------CCC-ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC----------CCceeeecc
Q 043412 250 --------LEK-PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE----------ENGYPLLVG 310 (383)
Q Consensus 250 --------~~~-~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~----------~~g~~~~~~ 310 (383)
..+ .+..+|+.||++|+||.+|+||++++|||+||+|||+|+.+|..|++.+ .+|++++++
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~ 426 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDS 426 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSS
T ss_pred CcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCC
Confidence 222 2368899999999999999999999999999999999999999999987 477877766
Q ss_pred cccccccCCCCcccccCCCHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 311 RMSEVTEGPFKGHFWAEPSVDKLRALMRLVV---SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll---~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
|+++++++|.+++ +|++.+.+|++++++ ++|||+.+++++.++|++++.+
T Consensus 427 ------------------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 427 ------------------NAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp ------------------SHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHC--
T ss_pred ------------------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHHhhhh
Confidence 9999999999999 799999999999864 7999999999999999998643
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=284.55 Aligned_cols=324 Identities=16% Similarity=0.104 Sum_probs=233.8
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCc--ccc----hhhcCCCh--------hhhhHHHHHHhhhcCCCccEE
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDL--QSL----QFWEGLPH--------HMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~--~~~----~~~~~~~~--------~~~~~~~~l~~~~~~~~pDiV 72 (383)
.||.+.++.+++++|.+.|+...+ ........ ... ..+..++. ........+.+++++.+||+|
T Consensus 34 ~gG~~~~~~~l~~~L~~~G~~V~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dii 111 (406)
T 2gek_A 34 PGGVQSHVLQLAEVLRDAGHEVSV--LAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRKVKKWIAEGDFDVL 111 (406)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEE--EESCCTTSCCCTTEEECCCCC------------CCHHHHHHHHHHHHHHCCSEE
T ss_pred CCcHHHHHHHHHHHHHHCCCeEEE--EecCCccccCCcccccCCcEEeccccCCcccccccHHHHHHHHHHHHhcCCCEE
Confidence 489999999999999999875443 22222111 000 00111111 011133567778888899999
Q ss_pred EecCCCCCCCCcccccC-CCCCCCCCCCcccccceeeeec--CCCCHHHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCC
Q 043412 73 ICHSEPGAWYPPLFDTL-PCPPTPGYGDFMAVIGRTMFET--DRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAK 148 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~ 148 (383)
|+|..........+... ..+.+ ...++...... ..+...+...++.+|.++++|+..++.+.+ ++. .+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~i------~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--~~ 183 (406)
T 2gek_A 112 HIHEPNAPSLSMLALQAAEGPIV------ATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGS--DA 183 (406)
T ss_dssp EEECCCSSSHHHHHHHHEESSEE------EEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSS--CE
T ss_pred EECCccchHHHHHHHHhcCCCEE------EEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCC--Cc
Confidence 99976553321111111 12222 11111110000 000001114468999999999999999877 443 48
Q ss_pred eEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc-ccccCHHHHHHHHHHHhccCCCeEEEEE
Q 043412 149 VVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW-EYRKGWDVLLKAYLEEFSKADGVVLYLL 227 (383)
Q Consensus 149 i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~~~~~~~l~i~ 227 (383)
+ +||||+|.+.+.+...... .+++.++++++|++ .+.||++.+++++..+.++.|+++|+++
T Consensus 184 ~-vi~~~v~~~~~~~~~~~~~----------------~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 246 (406)
T 2gek_A 184 V-EIPNGVDVASFADAPLLDG----------------YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV 246 (406)
T ss_dssp E-ECCCCBCHHHHHTCCCCTT----------------CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE
T ss_pred E-EecCCCChhhcCCCchhhh----------------ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 8 9999999877655432110 12346789999999 9999999999999999998899999999
Q ss_pred eCCCCCCCchHHHHHHHHhhC-------CCC--CccccccccCceEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCccc
Q 043412 228 TNPYHSGRDFGNKIVNFVEDS-------DLE--KPDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGPTE 297 (383)
Q Consensus 228 G~~~~~~~~~~~~~~~~~~~~-------~~~--~~v~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~g~~e 297 (383)
|++ +. +.++++++.+ |.. +++..+|+.||++|+||. .|++|++++|||+||+|||+++.++..|
T Consensus 247 G~~-----~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e 320 (406)
T 2gek_A 247 GRG-----DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRR 320 (406)
T ss_dssp SCS-----CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHH
T ss_pred cCC-----cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHH
Confidence 987 33 6666665543 333 345789999999999996 9999999999999999999999999999
Q ss_pred cccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 298 YLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 298 ~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++.++ +|++++++ |+++++++|.++++|++.+.+|++++++.+. .|+|+.+++++.++|+
T Consensus 321 ~i~~~~~g~~~~~~------------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 321 VLADGDAGRLVPVD------------------DADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRVYE 381 (406)
T ss_dssp HHTTTTSSEECCTT------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHH
T ss_pred HhcCCCceEEeCCC------------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 99975 88888766 9999999999999999999999999999876 9999999999999999
Q ss_pred HHHhcc
Q 043412 377 DILSSK 382 (383)
Q Consensus 377 ~~~~~~ 382 (383)
+++.++
T Consensus 382 ~~~~~~ 387 (406)
T 2gek_A 382 TVSGAG 387 (406)
T ss_dssp HHCCTT
T ss_pred HHHhhc
Confidence 988653
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=292.27 Aligned_cols=235 Identities=15% Similarity=0.158 Sum_probs=190.3
Q ss_pred hcCCCCEEEEeChHHHHHHHh----c------------------CCCCCCeEEecCCCcCCCCCCCCCCCCc--------
Q 043412 121 RCNRMDFVWVPTDFHVSTFIR----S------------------GVDPAKVVKIVQPVHVGFFDPVNCDPID-------- 170 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~----~------------------~~~~~~i~vi~ngid~~~~~~~~~~~~~-------- 170 (383)
.++.||.|+++|+..++.+.+ + +....++.|||||+|.+.|.|.......
T Consensus 471 ~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i 550 (816)
T 3s28_A 471 AMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI 550 (816)
T ss_dssp HHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHH
T ss_pred HHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccc
Confidence 368899999999998884221 1 1222399999999999999876543211
Q ss_pred -------cccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC------CCch
Q 043412 171 -------LASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS------GRDF 237 (383)
Q Consensus 171 -------~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~------~~~~ 237 (383)
...+..+++- .+++.++|+++||+.+.||++.+++|+.++.+..++++|+|+|+++.. ...+
T Consensus 551 ~~~l~~p~~~r~~lg~l-----~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~ 625 (816)
T 3s28_A 551 EELLYSDVENKEHLCVL-----KDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAE 625 (816)
T ss_dssp HHHHHCSCCBTTEESCB-----SCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHH
T ss_pred cccccchhhHHHHhccc-----CCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHH
Confidence 0111111110 156789999999999999999999999999887889999999998420 0125
Q ss_pred HHHHHHHHhhCCCCCccc---------------cccc-cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC
Q 043412 238 GNKIVNFVEDSDLEKPDD---------------GWAP-AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE 301 (383)
Q Consensus 238 ~~~~~~~~~~~~~~~~v~---------------~~~~-~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~ 301 (383)
.+.++++++++++.+++. .+++ .+|++|+||.+|+||++++|||+||+|||+|+.+|..|++.+
T Consensus 626 ~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~d 705 (816)
T 3s28_A 626 MKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVH 705 (816)
T ss_dssp HHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCB
T ss_pred HHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHcc
Confidence 678888999988865543 3344 689999999999999999999999999999999999999988
Q ss_pred C-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 302 E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV----SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 302 ~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+ +|+++++. |+++++++|.+++ .|++.+++|++++++.+.++|||+.+++++.++|+
T Consensus 706 g~~Gllv~p~------------------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 706 GKSGFHIDPY------------------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp TTTBEEECTT------------------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred CCcEEEeCCC------------------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6 88888877 9999999997776 89999999999999998899999999999999998
Q ss_pred HH
Q 043412 377 DI 378 (383)
Q Consensus 377 ~~ 378 (383)
.+
T Consensus 768 ~~ 769 (816)
T 3s28_A 768 VY 769 (816)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=267.98 Aligned_cols=291 Identities=15% Similarity=-0.016 Sum_probs=215.4
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCChhhhhHHHHHHhhhcCCCccEEEecCCCCCCCCcc
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPGAWYPPL 85 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~ 85 (383)
..||.++++.+++++|.+.|+...+ .....+.. ......-.+. .....+.+++++.+||+||+|+....+..
T Consensus 28 ~~gG~~~~~~~l~~~L~~~G~~v~v--~~~~~~~~-~~~~~~~~~~---~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~-- 99 (342)
T 2iuy_A 28 GYGGIQWVVANLMDGLLELGHEVFL--LGAPGSPA-GRPGLTVVPA---GEPEEIERWLRTADVDVVHDHSGGVIGPA-- 99 (342)
T ss_dssp SSCHHHHHHHHHHHHHHHTTCEEEE--ESCTTSCC-CSTTEEECSC---CSHHHHHHHHHHCCCSEEEECSSSSSCST--
T ss_pred cCChHHHHHHHHHHHHHHcCCeEEE--EecCCCCC-CCCcceeccC---CcHHHHHHHHHhcCCCEEEECCchhhHHH--
Confidence 3599999999999999999876443 22222111 1111111111 12346777888889999999975443221
Q ss_pred cccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCC
Q 043412 86 FDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVN 165 (383)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~ 165 (383)
.... +.+ +...++...+. ..+|.++++|+..++.+.+ ..++.+||||+|.+.+.+..
T Consensus 100 -----~~~~-~~p-v~~~h~~~~~~------------~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~~~~ 156 (342)
T 2iuy_A 100 -----GLPP-GTA-FISSHHFTTRP------------VNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYRSAA 156 (342)
T ss_dssp -----TCCT-TCE-EEEEECSSSBC------------SCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSCCST
T ss_pred -----Hhhc-CCC-EEEecCCCCCc------------ccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcCccc
Confidence 1111 223 33333332211 1299999999999998876 46899999999988776654
Q ss_pred CCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHH
Q 043412 166 CDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFV 245 (383)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~ 245 (383)
.. .++..+++++|++.+.||++.+++|++.+ +++|+++|+| +..+.+++++
T Consensus 157 ~~-------------------~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g-----~~~~~l~~~~ 207 (342)
T 2iuy_A 157 DQ-------------------VAKEDFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPA-----WEPEYFDEIT 207 (342)
T ss_dssp TC-------------------CCCCSCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCC-----CCHHHHHHHH
T ss_pred cc-------------------CCCCCEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCc-----ccHHHHHHHH
Confidence 31 12345799999999999999999999887 7899999988 3455666665
Q ss_pred hhC-------CCCC--ccccccccCceEEecCC----------CCCCChHHHHHHHcCCCEEEcCCCCccccccC--CCc
Q 043412 246 EDS-------DLEK--PDDGWAPAADVFVLPSR----------GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE--ENG 304 (383)
Q Consensus 246 ~~~-------~~~~--~v~~~~~~adi~v~ps~----------~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~--~~g 304 (383)
+.+ |..+ ++..+|+.||++++||. .|+||++++|||+||+|||+|+.++..|++.+ +
T Consensus 208 ~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~-- 285 (342)
T 2iuy_A 208 RRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGE-- 285 (342)
T ss_dssp HHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEE--
T ss_pred HHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCC--
Confidence 554 3333 44789999999999999 79999999999999999999999999999987 5
Q ss_pred eeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 305 YPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
.+|+++++ |+++++++|.++++ ++++++.+.++|||+.+++++.++|+++++++
T Consensus 286 ---------------~~g~~~~~-d~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 286 ---------------VVGYGTDF-APDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp ---------------ECCSSSCC-CHHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred ---------------CceEEcCC-CHHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 23455556 89999999999987 56778877899999999999999999998764
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-33 Score=260.02 Aligned_cols=214 Identities=10% Similarity=-0.002 Sum_probs=158.9
Q ss_pred cCCCC--EEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc
Q 043412 122 CNRMD--FVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW 199 (383)
Q Consensus 122 ~~~ad--~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~ 199 (383)
+..++ .++++|++.++.+.+.|++..++.+++||+|.+.+.+.... .++...++++||+
T Consensus 190 ~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~~~-------------------~~~~~~il~~gr~ 250 (413)
T 2x0d_A 190 YKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDK-------------------RQKEKIILVYGRP 250 (413)
T ss_dssp TSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTTSC-------------------CCCCSEEEEEECT
T ss_pred hccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhcccccc-------------------cCCCCEEEEEecC
Confidence 45554 68999999999999887765689999999987655432110 1234567788986
Q ss_pred -ccccCHHHHHHHHHHHhccCCC---eEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCCCCC
Q 043412 200 -EYRKGWDVLLKAYLEEFSKADG---VVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRGEGW 273 (383)
Q Consensus 200 -~~~K~~~~ll~a~~~l~~~~~~---~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~e~~ 273 (383)
.++||++.+++|+..+.++.|+ ++|+++|++.... .. .+...+..+|.. +++..+|+.||++++||.+|+|
T Consensus 251 ~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-~l--~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~ 327 (413)
T 2x0d_A 251 SVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-AL--GKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHP 327 (413)
T ss_dssp TCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-EE--ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSC
T ss_pred chhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-hc--CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCC
Confidence 6899999999999999888775 8999999874320 00 011112233432 5678999999999999999999
Q ss_pred ChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHH
Q 043412 274 GRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGK 352 (383)
Q Consensus 274 ~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~ 352 (383)
|++++||||||+|||++ .+|..|++.++ +|+++++. |+++++++|.++++|++++++
T Consensus 328 g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~------------------d~~~la~ai~~ll~~~~~~~~--- 385 (413)
T 2x0d_A 328 SYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQL------------------NPENIAETLVELCMSFNNRDV--- 385 (413)
T ss_dssp CSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSC------------------SHHHHHHHHHHHHHHTC-------
T ss_pred CcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCC------------------CHHHHHHHHHHHHcCHHHHHH---
Confidence 99999999999999995 45678999875 78888776 999999999999999887766
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 353 QAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 353 ~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
++++. .+.|+|+.+.++ .++|++++.+
T Consensus 386 ~~~~~-~~~~~W~~~~~~-~~~~~~l~~~ 412 (413)
T 2x0d_A 386 DKKES-SNMMFYINEFNE-FSFIKEIEEK 412 (413)
T ss_dssp ---CC-BSCGGGCCCC----TTHHHHHTT
T ss_pred hHHHH-HHhCCHHHHHHH-HHHHHHHHhh
Confidence 45554 468999999888 7888887653
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=244.89 Aligned_cols=312 Identities=12% Similarity=0.040 Sum_probs=212.3
Q ss_pred CCCCCCCChhHHHHHHHHH--HHhcccCCCceeeeecC--CCcccchh-----hcCCChhhhhHHHHHHhhhcCCCccEE
Q 043412 2 APFLSGGGYSSESWSYILA--LNEHVKNPRFKLAIEHH--GDLQSLQF-----WEGLPHHMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~--l~~~g~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~pDiV 72 (383)
++.+.+||.+.++.++++. +.+.|+... +..... .+...... +..++ ......+.+++++.+||||
T Consensus 212 ~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~~~Div 286 (568)
T 2vsy_A 212 SNGFGAHPTGLLTVALFEALQRRQPDLQMH--LFATSGDDGSTLRTRLAQASTLHDVT---ALGHLATAKHIRHHGIDLL 286 (568)
T ss_dssp ESCSSSSHHHHHHHHHHHHHHHHCTTEEEE--EEESSCCCSCHHHHHHHHTSEEEECT---TCCHHHHHHHHHHTTCSEE
T ss_pred CcccccChHHHHHHHHHhhccCCcccEEEE--EEECCCCCccHHHHHHHhcCeEEECC---CCCHHHHHHHHHhCCCCEE
Confidence 4667789999999999999 666664332 222211 11111110 00111 1124567888899999999
Q ss_pred EecCCCCC-CCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEE
Q 043412 73 ICHSEPGA-WYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVK 151 (383)
Q Consensus 73 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~v 151 (383)
|+++.... .....+.....+.. ...++.... .... . ..+..+|.++++|+..++ ++ +++.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~--~~~~--~-~~~~~~d~~i~~s~~~~~----~~---~~i~~ 348 (568)
T 2vsy_A 287 FDLRGWGGGGRPEVFALRPAPVQ------VNWLAYPGT--SGAP--W-MDYVLGDAFALPPALEPF----YS---EHVLR 348 (568)
T ss_dssp EECSSCTTCSSCHHHHTCCSSEE------EEESSSSSC--CCCT--T-CCEEEECTTTSCTTTGGG----CS---SEEEE
T ss_pred EECCCCCCcchHHHHhcCCCcee------EeeecCCcc--cCCC--C-ceEEEECCCcCCcccccC----Cc---ceeEc
Confidence 98754321 11111211111111 111111000 0000 0 011246778888886543 32 68999
Q ss_pred ecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEe-CC
Q 043412 152 IVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLT-NP 230 (383)
Q Consensus 152 i~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G-~~ 230 (383)
|||.++.....+... ....+.+++ ++++.+ ++++|++.+ ||++.+++++.++.++.|+++|+|+| +|
T Consensus 349 ipn~~~~~~~~~~~~---~~~~r~~~~-------~~~~~~-v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g 416 (568)
T 2vsy_A 349 LQGAFQPSDTSRVVA---EPPSRTQCG-------LPEQGV-VLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPG 416 (568)
T ss_dssp CSSCSCCCCTTCCCC---CCCCTGGGT-------CCTTSC-EEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCST
T ss_pred CCCcCCCCCCCCCCC---CCCCccccC-------CCCCCE-EEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCH
Confidence 999544321111101 011122222 344444 558999999 99999999999998889999999999 55
Q ss_pred CCCCCchHHHHHHHHhhCCCC-C-----------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEE-------cC
Q 043412 231 YHSGRDFGNKIVNFVEDSDLE-K-----------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIA-------TN 291 (383)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~-----------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~-------~~ 291 (383)
+..+.+++.++.+|+. + ++..+|+.||++|+||.+ |+|++++|||+||+|||+ |+
T Consensus 417 -----~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~ 490 (568)
T 2vsy_A 417 -----EADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAAR 490 (568)
T ss_dssp -----THHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGS
T ss_pred -----HHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHH
Confidence 6778888888888775 3 456788999999999999 999999999999999999 99
Q ss_pred CC-------CccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH--HhcC
Q 043412 292 WS-------GPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDM--IQRF 362 (383)
Q Consensus 292 ~~-------g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~--~~~~ 362 (383)
.+ |..|++.+ |+++++++|.++++|++.+.+|++++++.+ .+.|
T Consensus 491 ~~~~~l~~~g~~e~v~~---------------------------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 491 VAGSLNHHLGLDEMNVA---------------------------DDAAFVAKAVALASDPAALTALHARVDVLRRASGVF 543 (568)
T ss_dssp HHHHHHHHHTCGGGBCS---------------------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTT
T ss_pred HHHHHHHHCCChhhhcC---------------------------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCC
Confidence 98 88887754 799999999999999999999999999987 5789
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q 043412 363 SPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 363 s~~~~~~~~~~~~~~~~~~ 381 (383)
+|+.+++++.++|++++.+
T Consensus 544 ~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 544 HMDGFADDFGALLQALARR 562 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998865
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=236.98 Aligned_cols=241 Identities=16% Similarity=0.151 Sum_probs=166.0
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCcccc-----c--cCCCCCC-CCcEE
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVL-----G--LSNMNTS-SKEFV 192 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l-----~--~~~~~~~-~~~~~ 192 (383)
+..||.|+++|+.+++.+.. ++.++..+ ||||+|.+.|.|...... .....+..+ + ...++++ ++.++
T Consensus 258 a~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~-~k~~aK~klq~~l~~~~~~~l~l~~dk~li 334 (725)
T 3nb0_A 258 AHSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQN-LHALKKEKINDFVRGHFHGCFDFDLDNTLY 334 (725)
T ss_dssp HHHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHH-HHHHHHHHHHHHHHHHTTTCCCSCGGGEEE
T ss_pred HHhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHH-HHHHHHHHHHHHHHhhcccCCCCCCCceeE
Confidence 57899999999999999998 56665543 999999999988521000 000000000 0 0122344 45567
Q ss_pred EEEeeccc-cccCHHHHHHHHHHHhcc-------CCCeEEEEEeCCCCCCC-----------------------------
Q 043412 193 FLSVFKWE-YRKGWDVLLKAYLEEFSK-------ADGVVLYLLTNPYHSGR----------------------------- 235 (383)
Q Consensus 193 i~~~g~~~-~~K~~~~ll~a~~~l~~~-------~~~~~l~i~G~~~~~~~----------------------------- 235 (383)
++.+||++ .+||++.+++|+.+|... ..-+.|+++..+.....
T Consensus 335 ifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 414 (725)
T 3nb0_A 335 FFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIF 414 (725)
T ss_dssp EEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHH
Confidence 77789999 689999999999888743 23467777766532100
Q ss_pred -----------------c--------------------------------------hHHHHHHHHhhCCCCC--------
Q 043412 236 -----------------D--------------------------------------FGNKIVNFVEDSDLEK-------- 252 (383)
Q Consensus 236 -----------------~--------------------------------------~~~~~~~~~~~~~~~~-------- 252 (383)
+ ..+.+...++.+++.+
T Consensus 415 ~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKV 494 (725)
T 3nb0_A 415 DHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKM 494 (725)
T ss_dssp HHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEE
T ss_pred HHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeE
Confidence 0 0011111222222211
Q ss_pred ----------------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC--------Cceeee
Q 043412 253 ----------------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE--------NGYPLL 308 (383)
Q Consensus 253 ----------------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~--------~g~~~~ 308 (383)
++..+|+.||++|+||++|+||++++||||||+|||+|+.+|..|++.+. +|++++
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~ 574 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIV 574 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEE
T ss_pred EEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEe
Confidence 23567899999999999999999999999999999999999999988763 566664
Q ss_pred cccccccccCCCCcccccCCCHHHHHHHHHHHh----c-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 309 VGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV----S-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll----~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
+. ++.++++++++|.+++ . ++..+..|++++++. ++.|||++++++|.++|++++.+
T Consensus 575 ~r---------------d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~-A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 575 DR---------------RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEAL-SDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp CC---------------SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHG-GGGGBHHHHHHHHHHHHHHHHHH
T ss_pred CC---------------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHhh
Confidence 21 1125665555555544 3 677888999998874 67999999999999999998864
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.4e-29 Score=234.70 Aligned_cols=233 Identities=12% Similarity=0.059 Sum_probs=173.9
Q ss_pred HHHHhcCCCCEEEEeChHHHHHHHh-----------------cCCCCCCeEEecCCCcCCCCCCCCCCCCcc-ccCCccc
Q 043412 117 EHVKRCNRMDFVWVPTDFHVSTFIR-----------------SGVDPAKVVKIVQPVHVGFFDPVNCDPIDL-ASIGKPV 178 (383)
Q Consensus 117 ~~~~~~~~ad~vi~~s~~~~~~~~~-----------------~~~~~~~i~vi~ngid~~~~~~~~~~~~~~-~~~~~~~ 178 (383)
.....+..+|.+...+....+.+.+ ++....++.++|||||.+.|.+........ ....+..
T Consensus 172 ~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~ 251 (482)
T 1uqt_A 172 TLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAE 251 (482)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHH
Confidence 3444466789998888776665542 111235789999999988775421110000 0000111
Q ss_pred cccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCC----eEEEEEeCCCCCCCc----hHHHHHHHHhhC--
Q 043412 179 LGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG----VVLYLLTNPYHSGRD----FGNKIVNFVEDS-- 248 (383)
Q Consensus 179 l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~----~~~~~~~~~~~~-- 248 (383)
+ .++++|+++||+++.||++.+++|+.++++++|+ ++|+++|++...+.+ +.+++++++...
T Consensus 252 ~--------~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~ 323 (482)
T 1uqt_A 252 L--------KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRING 323 (482)
T ss_dssp T--------TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred h--------CCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhh
Confidence 1 2478999999999999999999999999888774 789999975433333 234455554331
Q ss_pred --------------CC--CCccccccccCceEEecCCCCCCChHHHHHHHcCC-----CEEEcCCCCccccccCCCceee
Q 043412 249 --------------DL--EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGL-----PVIATNWSGPTEYLTEENGYPL 307 (383)
Q Consensus 249 --------------~~--~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~-----PvI~~~~~g~~e~v~~~~g~~~ 307 (383)
+. .+++..+|+.||++++||..||||++++||||||+ |+|+|+.+|..+.+. +|+++
T Consensus 324 ~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~--~g~lv 401 (482)
T 1uqt_A 324 KYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--SALIV 401 (482)
T ss_dssp HHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT--TSEEE
T ss_pred hcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC--CeEEE
Confidence 11 14567899999999999999999999999999997 899999888888773 78888
Q ss_pred ecccccccccCCCCcccccCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 308 LVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSN-VDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 308 ~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
++. |+++++++|.+++++ ++.++++.+++++.+ +.|||+.+++++.+.|+++
T Consensus 402 ~p~------------------d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v-~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 NPY------------------DRDEVAAALDRALTMSLAERISRHAEMLDVI-VKNDINHWQECFISDLKQI 454 (482)
T ss_dssp CTT------------------CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHS
T ss_pred CCC------------------CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhc
Confidence 877 999999999999984 677889999999986 4599999999999999876
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=219.44 Aligned_cols=289 Identities=15% Similarity=0.070 Sum_probs=197.9
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcc-cchhhcC------CChhhhhHHHHHHhhhcCCCccEEEecCCCC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ-SLQFWEG------LPHHMRNLAVELYNTECRTNETVVICHSEPG 79 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~ 79 (383)
+.|....+..++++|.+.| .+.+......... ......+ +|. .....+.+++++++||+||++...
T Consensus 49 s~G~~~~~~~L~~~L~~~~---~v~v~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~~l~~~l~~~~pDiv~~~~~~- 121 (374)
T 2xci_A 49 SIGEFNTFLPILKELKREH---RILLTYFSPRAREYLKTKSDFYDCLHPLPL---DNPFSVKRFEELSKPKALIVVERE- 121 (374)
T ss_dssp SHHHHHHHHHHHHHHHHHS---CEEEEESCGGGHHHHHTTGGGCSEEEECCC---SSHHHHHHHHHHHCCSEEEEESCC-
T ss_pred CHHHHHHHHHHHHHHHhcC---CEEEEEcCCcHHHHHHHhcccccceeECCC---CCHHHHHHHHHHhCCCEEEEECcc-
Confidence 5577889999999999987 2223322111110 0000011 332 234667788889999999986321
Q ss_pred CCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCC
Q 043412 80 AWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVG 159 (383)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~ 159 (383)
.|. ..+.....+ . ....++ . .....+...++++|.++++|+..++.+.++|++ ++.+++|+.
T Consensus 122 ~~~-~~~~~~~~p-~------~~~~~~-~----~~~~~~~~~~~~~d~ii~~S~~~~~~l~~~g~~--ki~vi~n~~--- 183 (374)
T 2xci_A 122 FWP-SLIIFTKVP-K------ILVNAY-A----KGSLIEKILSKKFDLIIMRTQEDVEKFKTFGAK--RVFSCGNLK--- 183 (374)
T ss_dssp CCH-HHHHHCCSC-E------EEEEEC-C----CCCHHHHHHHTTCSEEEESCHHHHHHHHTTTCC--SEEECCCGG---
T ss_pred CcH-HHHHHHhCC-E------EEEEee-c----CchHHHHHHHHhCCEEEECCHHHHHHHHHcCCC--eEEEcCCCc---
Confidence 222 122111111 1 011111 0 011234455789999999999999999998886 899999973
Q ss_pred CCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHH
Q 043412 160 FFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGN 239 (383)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~ 239 (383)
|.+..... . .+ ..+++++.|+ ..||.+.+++|++++.++.|+++|+|+|+++ +..+
T Consensus 184 -f~~~~~~~------~--~l---------~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~----~~~~ 239 (374)
T 2xci_A 184 -FICQKGKG------I--KL---------KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHI----ENAK 239 (374)
T ss_dssp -GCCCCCSC------C--CC---------SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSG----GGHH
T ss_pred -cCCCcChh------h--hh---------cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCH----HHHH
Confidence 21111100 0 01 1245666665 4589999999999999889999999999872 2235
Q ss_pred HHHHHHhhCCCC-----------------CccccccccCceEEecCC-CCCCChHHHHHHHcCCCEEEc-CCCCcccccc
Q 043412 240 KIVNFVEDSDLE-----------------KPDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIAT-NWSGPTEYLT 300 (383)
Q Consensus 240 ~~~~~~~~~~~~-----------------~~v~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~~-~~~g~~e~v~ 300 (383)
.++++++++++. +++..+|+.||++++||. .|++|++++|||+||+|||++ +.++..|++.
T Consensus 240 ~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~ 319 (374)
T 2xci_A 240 IFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKE 319 (374)
T ss_dssp HHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHH
T ss_pred HHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHH
Confidence 777787776653 677899999999888764 477899999999999999975 6688899886
Q ss_pred C--CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCC
Q 043412 301 E--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 301 ~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 363 (383)
+ .+|++++++ |+++|+++|.++++| +.+++|++++++.+.++++
T Consensus 320 ~~~~~G~l~~~~------------------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 320 FLEKEGAGFEVK------------------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp HHHHTTCEEECC------------------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEeC------------------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhccc
Confidence 5 367777766 999999999999999 9999999999998766443
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=197.81 Aligned_cols=182 Identities=17% Similarity=0.208 Sum_probs=144.9
Q ss_pred ecCCCcCCCCC--CCCCCCC--ccccCCccccccCCCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHHh--ccCCCeEE
Q 043412 152 IVQPVHVGFFD--PVNCDPI--DLASIGKPVLGLSNMNTSSKEFVFLSVFKWE-YRKGWDVLLKAYLEEF--SKADGVVL 224 (383)
Q Consensus 152 i~ngid~~~~~--~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~--~~~~~~~l 224 (383)
||||+|.+.|. +...... ....+.++++ ++..+++++|++. +.||++.+++++..+. ++.++++|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~--------~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l 73 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGM--------DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF 73 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTC--------CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEE
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCC--------CCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEE
Confidence 79999999887 6542000 0111122222 2455899999999 9999999999999997 77899999
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhC-------CCCC--ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDS-------DLEK--PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~-------~~~~--~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+++|+++ +...+.++++++.+ |..+ ++..+|+.||++++||..|++|++++|||+||+|||+++.++.
T Consensus 74 ~i~G~~~---~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 150 (200)
T 2bfw_A 74 IIIGKGD---PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL 150 (200)
T ss_dssp EEECCBC---HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHH
T ss_pred EEECCCC---hHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCCh
Confidence 9999872 12667777776653 3333 6778999999999999999999999999999999999999999
Q ss_pred cccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhcCC
Q 043412 296 TEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 296 ~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s 363 (383)
.+++...+|++++++ |+++++++|.++++ |++.+.+|++++++.+.+ ||
T Consensus 151 ~e~~~~~~g~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 151 RDIITNETGILVKAG------------------DPGELANAILKALELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp HHHCCTTTCEEECTT------------------CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred HHHcCCCceEEecCC------------------CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence 999933488888776 99999999999999 999999999999998776 76
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=219.35 Aligned_cols=300 Identities=11% Similarity=-0.060 Sum_probs=200.0
Q ss_pred CChhHHHHHHHHHHHhcccCCCceeeeecCCCcc---c---chh--h--cCCC-----------hhhhhHHHHHHhhhcC
Q 043412 8 GGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ---S---LQF--W--EGLP-----------HHMRNLAVELYNTECR 66 (383)
Q Consensus 8 ~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~---~---~~~--~--~~~~-----------~~~~~~~~~l~~~~~~ 66 (383)
||....+..++++|.+.|+...+ .....+... . ... + ..++ .........+.+++++
T Consensus 17 gG~~~~~~~la~~L~~~G~~V~v--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 94 (364)
T 1f0k_A 17 GGHVFPGLAVAHHLMAQGWQVRW--LGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKA 94 (364)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEE--EECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHcCCEEEE--EecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46666677999999999875443 222221100 0 000 0 0011 0112234567778888
Q ss_pred CCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCC
Q 043412 67 TNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDP 146 (383)
Q Consensus 67 ~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~ 146 (383)
.+||+||+|+....+...........+. ....++.. .........+.+|.+++.++.. ++
T Consensus 95 ~~pDvv~~~~~~~~~~~~~~~~~~~~p~-----v~~~~~~~------~~~~~~~~~~~~d~v~~~~~~~--------~~- 154 (364)
T 1f0k_A 95 YKPDVVLGMGGYVSGPGGLAAWSLGIPV-----VLHEQNGI------AGLTNKWLAKIATKVMQAFPGA--------FP- 154 (364)
T ss_dssp HCCSEEEECSSTTHHHHHHHHHHTTCCE-----EEEECSSS------CCHHHHHHTTTCSEEEESSTTS--------SS-
T ss_pred cCCCEEEEeCCcCchHHHHHHHHcCCCE-----EEEecCCC------CcHHHHHHHHhCCEEEecChhh--------cC-
Confidence 8999999996543221111111111111 11111110 0111222357899999988754 23
Q ss_pred CCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCC-cEEEEEeeccccccCHHHHHHHHHHHhccCCCeE-E
Q 043412 147 AKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSK-EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVV-L 224 (383)
Q Consensus 147 ~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~-l 224 (383)
++.+++||+|.+.+.+... +.++++ +++ ..++++.|++.+.|+.+.+++|+..+.+ +++ +
T Consensus 155 -~~~~i~n~v~~~~~~~~~~-------~~~~~~-------~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l 216 (364)
T 1f0k_A 155 -NAEVVGNPVRTDVLALPLP-------QQRLAG-------REGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIW 216 (364)
T ss_dssp -SCEECCCCCCHHHHTSCCH-------HHHHTT-------CCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEE
T ss_pred -CceEeCCccchhhcccchh-------hhhccc-------CCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEE
Confidence 6889999999876544211 011111 233 4466677799999999999999998854 678 5
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhCCC--------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDSDL--------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
+++|++ + .+.+++.++++++ .+++..+|+.||++|+||. |++++|||+||+|||+++.+|..
T Consensus 217 ~i~G~~-----~-~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 217 HQSGKG-----S-QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp EECCTT-----C-HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCCCTT
T ss_pred EEcCCc-----h-HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCc
Confidence 667876 2 3566666666543 3677899999999999983 89999999999999999998764
Q ss_pred --------ccccCCCceeeecccccccccCCCCcccccCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHH
Q 043412 297 --------EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPS--VDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366 (383)
Q Consensus 297 --------e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~ 366 (383)
+++++++|++++++ | +++++++|.++ |++.+++|++++++. .+.|+|+.
T Consensus 287 ~~q~~~~~~~~~~g~g~~~~~~------------------d~~~~~la~~i~~l--~~~~~~~~~~~~~~~-~~~~~~~~ 345 (364)
T 1f0k_A 287 RQQYWNALPLEKAGAAKIIEQP------------------QLSVDAVANTLAGW--SRETLLTMAERARAA-SIPDATER 345 (364)
T ss_dssp CHHHHHHHHHHHTTSEEECCGG------------------GCCHHHHHHHHHTC--CHHHHHHHHHHHHHT-CCTTHHHH
T ss_pred hhHHHHHHHHHhCCcEEEeccc------------------cCCHHHHHHHHHhc--CHHHHHHHHHHHHHh-hccCHHHH
Confidence 46666778888765 6 99999999998 999999999999986 46899999
Q ss_pred HHHHHHHHHHHH
Q 043412 367 VAGIVTDHIKDI 378 (383)
Q Consensus 367 ~~~~~~~~~~~~ 378 (383)
+++++.++|++.
T Consensus 346 ~~~~~~~~y~~~ 357 (364)
T 1f0k_A 346 VANEVSRVARAL 357 (364)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHH
Confidence 999999999764
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-29 Score=228.80 Aligned_cols=276 Identities=12% Similarity=0.105 Sum_probs=189.1
Q ss_pred HHHHHHhhhcCCCccEEEecCCCC-CCCCccccc-CCCCCCCCCCCcccccceeeeec-CCCCHHHHHh-c-CCCCEEEE
Q 043412 56 LAVELYNTECRTNETVVICHSEPG-AWYPPLFDT-LPCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR-C-NRMDFVWV 130 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~ad~vi~ 130 (383)
....+.+++++++||+||+|+... .+....... ...+.+ ...++...+.. ..+...+.+. + +.+|.+++
T Consensus 83 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 156 (375)
T 3beo_A 83 GLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVG------HVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFS 156 (375)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEE------EESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEE------EEecccccccccCCChhHhhhhHHhhhhheeeC
Confidence 345678888899999999986421 111111111 112222 11111100110 1222333332 3 44999999
Q ss_pred eChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccc-cCHHHH
Q 043412 131 PTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYR-KGWDVL 208 (383)
Q Consensus 131 ~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~-K~~~~l 208 (383)
+|+..++.+.+.|++++++.+++|| +|...+.+........ +.+ + +++.++++++|++.+. ||++.+
T Consensus 157 ~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~--~~~--~-------~~~~~vl~~~gr~~~~~K~~~~l 225 (375)
T 3beo_A 157 PTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPV--LEK--L-------GNNRLVLMTAHRRENLGEPMRNM 225 (375)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHH--HHT--T-------TTSEEEEEECCCGGGTTHHHHHH
T ss_pred CCHHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHH--HHh--c-------cCCCeEEEEecccccchhHHHHH
Confidence 9999999999888888899999999 7865543322110000 000 0 2456788899998875 999999
Q ss_pred HHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CC-----C--CccccccccCceEEecCCCCCCChHHHHH
Q 043412 209 LKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DL-----E--KPDDGWAPAADVFVLPSRGEGWGRPLVEA 280 (383)
Q Consensus 209 l~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~-----~--~~v~~~~~~adi~v~ps~~e~~~~~~~Ea 280 (383)
++|+.++.++.|++++++ |.++ +..+.+.+++++... ++ . .++..+|+.||++|+|| |.+++||
T Consensus 226 i~a~~~l~~~~~~~~~i~-~~g~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA 297 (375)
T 3beo_A 226 FRAIKRLVDKHEDVQVVY-PVHM--NPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEA 297 (375)
T ss_dssp HHHHHHHHHHCTTEEEEE-ECCS--CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEE-eCCC--CHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHH
Confidence 999999988888999665 5442 122344555543311 11 1 25668899999999999 6679999
Q ss_pred HHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043412 281 MSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMI 359 (383)
Q Consensus 281 ~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 359 (383)
|+||+|||+++. ++..|++++++|++++. |+++++++|.++++|++.+++|++++++. .
T Consensus 298 ~a~G~Pvi~~~~~~~~~e~v~~g~g~~v~~-------------------d~~~la~~i~~ll~~~~~~~~~~~~~~~~-~ 357 (375)
T 3beo_A 298 PSLGVPVLVLRDTTERPEGIEAGTLKLAGT-------------------DEETIFSLADELLSDKEAHDKMSKASNPY-G 357 (375)
T ss_dssp HHHTCCEEECSSCCSCHHHHHTTSEEECCS-------------------CHHHHHHHHHHHHHCHHHHHHHCCCCCTT-C
T ss_pred HhcCCCEEEecCCCCCceeecCCceEEcCC-------------------CHHHHHHHHHHHHhChHhHhhhhhcCCCC-C
Confidence 999999999965 88999988878777753 89999999999999999999999998875 4
Q ss_pred hcCCHHHHHHHHHHHHH
Q 043412 360 QRFSPETVAGIVTDHIK 376 (383)
Q Consensus 360 ~~~s~~~~~~~~~~~~~ 376 (383)
+.|+|+.+++.+.++++
T Consensus 358 ~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 358 DGRASERIVEAILKHFN 374 (375)
T ss_dssp CSCHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHhh
Confidence 68999999998887653
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-29 Score=229.38 Aligned_cols=284 Identities=11% Similarity=0.077 Sum_probs=193.7
Q ss_pred HHHHHHhhhcCCCccEEEecCC-CCCCCCcccccC-CCCCCCCCCCcccccceeeeec-CCCCHHHHHh--cCCCCEEEE
Q 043412 56 LAVELYNTECRTNETVVICHSE-PGAWYPPLFDTL-PCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR--CNRMDFVWV 130 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~ad~vi~ 130 (383)
....+.+++++.+||+||+|+. ...+...+.... ..+.+ ...++...+.. ..+.....+. .+.+|.+++
T Consensus 74 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 147 (384)
T 1vgv_A 74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVG------HVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFS 147 (384)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEE------EESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEE------EEecccccccccCCCchHhhHHHHHhhccEEEc
Confidence 3567888889999999999964 222221121111 11211 11121111111 1223333333 366999999
Q ss_pred eChHHHHHHHhcCCCCCCeEEecCCC-cCCCCCCCCCCC-C--ccccCCccc-cccCCCCCCCCcEEEEEeeccccc-cC
Q 043412 131 PTDFHVSTFIRSGVDPAKVVKIVQPV-HVGFFDPVNCDP-I--DLASIGKPV-LGLSNMNTSSKEFVFLSVFKWEYR-KG 204 (383)
Q Consensus 131 ~s~~~~~~~~~~~~~~~~i~vi~ngi-d~~~~~~~~~~~-~--~~~~~~~~~-l~~~~~~~~~~~~~i~~~g~~~~~-K~ 204 (383)
+|+..++.+.++|++++++.+++||+ |...+.+..... . ....+.+++ +. +++.++++++||+.+. ||
T Consensus 148 ~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vl~~~gr~~~~~kg 221 (384)
T 1vgv_A 148 PTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFID------PDKKMILVTGHRRESFGRG 221 (384)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCC------TTSEEEEEECCCBSSCCHH
T ss_pred CcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccC------CCCCEEEEEeCCccccchH
Confidence 99999999988898888999999994 432221110000 0 000011111 21 2345788999999876 99
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC---------CCCCccccccccCceEEecCCCCCCCh
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS---------DLEKPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
++.+++|+.++.++.|++++++.++. .....+.+++++... +. +++..+|+.||++|+|| |.
T Consensus 222 ~~~li~a~~~l~~~~~~~~l~i~~g~---~~~~~~~l~~~~~~~~~v~~~g~~~~-~~~~~~~~~ad~~v~~S-----g~ 292 (384)
T 1vgv_A 222 FEEICHALADIATTHQDIQIVYPVHL---NPNVREPVNRILGHVKNVILIDPQEY-LPFVWLMNHAWLILTDS-----GG 292 (384)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEECCB---CHHHHHHHHHHHTTCTTEEEECCCCH-HHHHHHHHHCSEEEESS-----ST
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEcCC---CHHHHHHHHHHhhcCCCEEEeCCCCH-HHHHHHHHhCcEEEECC-----cc
Confidence 99999999999888899999886432 112456666654321 11 45678899999999999 34
Q ss_pred HHHHHHHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
+++|||+||+|||+++. ++..|++.+++|+++++ |+++++++|.++++|++.+++|++++
T Consensus 293 ~~lEA~a~G~PvI~~~~~~~~~e~v~~g~g~lv~~-------------------d~~~la~~i~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 293 IQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGT-------------------DKQRIVEEVTRLLKDENEYQAMSRAH 353 (384)
T ss_dssp GGGTGGGGTCCEEEESSCCSCHHHHHHTSEEEECS-------------------SHHHHHHHHHHHHHCHHHHHHHHSSC
T ss_pred hHHHHHHcCCCEEEccCCCCcchhhhCCceEEeCC-------------------CHHHHHHHHHHHHhChHHHhhhhhcc
Confidence 58999999999999987 88899887778877753 89999999999999999999999998
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 355 REDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++. .+.|+|+.+++.+.++|+++.+
T Consensus 354 ~~~-~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 354 NPY-GDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp CTT-CCSCHHHHHHHHHHHTCCCC--
T ss_pred CCC-cCCCHHHHHHHHHHHHHHhhcc
Confidence 875 5789999999999888776543
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-27 Score=189.08 Aligned_cols=155 Identities=19% Similarity=0.161 Sum_probs=128.1
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccC
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAA 261 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~a 261 (383)
+++|+++|++.++||++.+++|+..+. +.++++|+++|+| +..+.++++++.+++. +++..+|+.|
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g-----~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKG-----PDEKKIKLLAQKLGVKAEFGFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCS-----TTHHHHHHHHHHHTCEEECCCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCC-----ccHHHHHHHHHHcCCeEEEeecCHHHHHHHHHhC
Confidence 578999999999999999999999874 4589999999987 4467777777766542 5577899999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCC-CEEE-cCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGL-PVIA-TNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~-PvI~-~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
|++++||..|+||++++|||+||+ |||+ ++.++..+++.++ +.+++++ |+++++++|.+
T Consensus 76 dv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~-~~~~~~~------------------~~~~l~~~i~~ 136 (166)
T 3qhp_A 76 TLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE-RSLFEPN------------------NAKDLSAKIDW 136 (166)
T ss_dssp SEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSG-GGEECTT------------------CHHHHHHHHHH
T ss_pred CEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCC-ceEEcCC------------------CHHHHHHHHHH
Confidence 999999999999999999999998 9999 5578888888775 2355544 99999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
+++|++.+++|++++++.+ ++|||+.++++
T Consensus 137 l~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 137 WLENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp HHHCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred HHhCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 9999999999999999976 88999998764
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=211.84 Aligned_cols=279 Identities=10% Similarity=0.011 Sum_probs=191.9
Q ss_pred CccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCC--CCHHHHHhcCCCCEEEEeChHHHHHHHh----
Q 043412 68 NETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDR--VSPEHVKRCNRMDFVWVPTDFHVSTFIR---- 141 (383)
Q Consensus 68 ~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ad~vi~~s~~~~~~~~~---- 141 (383)
.-|+|.+|+.....++.++.........++......-...+|..-. +...+.+.+-.+|.|.+.+....+.|.+
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r 228 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVAD 228 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHH
Confidence 4689999987665555444432211110110000001111221111 2355666689999999999988877543
Q ss_pred -c-CCC-------------CCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHH
Q 043412 142 -S-GVD-------------PAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWD 206 (383)
Q Consensus 142 -~-~~~-------------~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~ 206 (383)
. |.+ ..++.++|+|||++.|.+..... .. .-+..+ .++.+|+++||+++.||++
T Consensus 229 ~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~-~~--~lr~~~--------~~~~lIl~VgRLd~~KGi~ 297 (496)
T 3t5t_A 229 LLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQL-PE--GIEEWA--------DGHRLVVHSGRTDPIKNAE 297 (496)
T ss_dssp HCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCC-CT--THHHHH--------TTSEEEEEEEESSGGGCHH
T ss_pred HhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHH-HH--HHHHHh--------CCceEEEEcccCccccCHH
Confidence 2 321 12678999999999987654311 11 111111 2578999999999999999
Q ss_pred HHHHHHHHHhccCCC---eEEEEEeCCCCCCCch----HHHHHHHHhhCC-------C-------CCccccccccCceEE
Q 043412 207 VLLKAYLEEFSKADG---VVLYLLTNPYHSGRDF----GNKIVNFVEDSD-------L-------EKPDDGWAPAADVFV 265 (383)
Q Consensus 207 ~ll~a~~~l~~~~~~---~~l~i~G~~~~~~~~~----~~~~~~~~~~~~-------~-------~~~v~~~~~~adi~v 265 (383)
.+++|+ ++++++|+ +.|+++|.+..++.+. ..++++++...+ + .+++..+|+.||+++
T Consensus 298 ~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~v 376 (496)
T 3t5t_A 298 RAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLI 376 (496)
T ss_dssp HHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEE
T ss_pred HHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEE
Confidence 999999 99888886 5688887654333333 344444443321 1 145678999999999
Q ss_pred ecCCCCCCChHHHHHHHcC---CCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc
Q 043412 266 LPSRGEGWGRPLVEAMSMG---LPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342 (383)
Q Consensus 266 ~ps~~e~~~~~~~Ea~a~G---~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~ 342 (383)
+||..||||++.+|||||| .|+|+|..+|..+.+. ++|++|++. |+++++++|.++++
T Consensus 377 v~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-~~allVnP~------------------D~~~lA~AI~~aL~ 437 (496)
T 3t5t_A 377 FNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG-EYCRSVNPF------------------DLVEQAEAISAALA 437 (496)
T ss_dssp ECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-GGSEEECTT------------------BHHHHHHHHHHHHH
T ss_pred ECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-CCEEEECCC------------------CHHHHHHHHHHHHc
Confidence 9999999999999999997 8999999998888874 357777776 99999999999998
Q ss_pred CH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 343 NV-DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 343 ~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
++ +.++++.++.+++ ...++...+++.+.+.++..
T Consensus 438 m~~~er~~r~~~~~~~-V~~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 438 AGPRQRAEAAARRRDA-ARPWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCBHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHhhc
Confidence 64 6788888888887 47899999999999888765
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-28 Score=224.59 Aligned_cols=195 Identities=11% Similarity=0.045 Sum_probs=150.3
Q ss_pred HHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
...++++|.++++|+..++.+.+.+ ++.+||||+|.+.|.+..... .++.++++++|+
T Consensus 173 ~~~~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~------------------~~~~~~i~~vGr 230 (406)
T 2hy7_A 173 DRVAPTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSP------------------YAEGIHAVAVGS 230 (406)
T ss_dssp HHHGGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCS------------------CCSSEEEEEECC
T ss_pred HHHHHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccc------------------cCCCcEEEEEec
Confidence 3447899999999999999887655 899999999988775432210 123478999999
Q ss_pred cccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCCCCCChH
Q 043412 199 WEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRGEGWGRP 276 (383)
Q Consensus 199 ~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~e~~~~~ 276 (383)
+.+.||+ +..+.++.|+++|+|+|+|+. ....+.+.+..+|.. +++..+|+.||++++||..|++|++
T Consensus 231 l~~~Kg~------~~~l~~~~~~~~l~ivG~g~~----~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~ 300 (406)
T 2hy7_A 231 MLFDPEF------FVVASKAFPQVTFHVIGSGMG----RHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVY 300 (406)
T ss_dssp TTBCHHH------HHHHHHHCTTEEEEEESCSSC----CCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTT
T ss_pred cccccCH------HHHHHHhCCCeEEEEEeCchH----HhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchH
Confidence 9999998 334444578999999998730 000111222333433 4677899999999999999999999
Q ss_pred HHHHH-------HcCCCEEEcCCCCccccccCCCcee-eecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 277 LVEAM-------SMGLPVIATNWSGPTEYLTEENGYP-LLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 277 ~~Ea~-------a~G~PvI~~~~~g~~e~v~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
++||| +||+|||+|+. +....+|++ ++++ |+++++++|.++++|++
T Consensus 301 ~lEAm~Kl~eYla~G~PVIas~~-----v~~~~~G~l~v~~~------------------d~~~la~ai~~ll~~~~--- 354 (406)
T 2hy7_A 301 LADSSMKLLQYDFFGLPAVCPNA-----VVGPYKSRFGYTPG------------------NADSVIAAITQALEAPR--- 354 (406)
T ss_dssp HHHHCHHHHHHHHHTCCEEEEGG-----GTCSCSSEEEECTT------------------CHHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHHHHHhhCCCcEEEehh-----cccCcceEEEeCCC------------------CHHHHHHHHHHHHhCcc---
Confidence 99999 99999999987 333347877 7776 99999999999999887
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHH--HHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIVTDH--IKDI 378 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~~~~--~~~~ 378 (383)
+ ...++|+|+.+++++.++ |+++
T Consensus 355 ------~-~~~~~~sw~~~a~~~~~~~~y~~~ 379 (406)
T 2hy7_A 355 ------V-RYRQCLNWSDTTDRVLDPRAYPET 379 (406)
T ss_dssp ------C-CCSCCCBHHHHHHHHHCGGGSGGG
T ss_pred ------h-hhhhcCCHHHHHHHHHHhhccccc
Confidence 1 235789999999999998 7654
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-25 Score=203.85 Aligned_cols=271 Identities=12% Similarity=0.066 Sum_probs=181.9
Q ss_pred HHHHHHhhhcCCCccEEEecCCCCC-CCCcccccC-CCCCCCCCCCcccccceeeeec-CCCCHHHHHh--cCCCCEEEE
Q 043412 56 LAVELYNTECRTNETVVICHSEPGA-WYPPLFDTL-PCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR--CNRMDFVWV 130 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~ad~vi~ 130 (383)
....+.+++++++||+||+|..... +........ ..+.+ ....+...+.. ..+.....+. .+.+|.+++
T Consensus 79 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (376)
T 1v4v_A 79 ILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVG------HVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFA 152 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEE------EETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEE------EEeCCCccccccCCCchHHHHHHHHHHhceeeC
Confidence 3456788888999999999964321 211111111 11111 11111100110 1122222222 356899999
Q ss_pred eChHHHHHHHhcCCCCCCeEEecCCC-cCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHH
Q 043412 131 PTDFHVSTFIRSGVDPAKVVKIVQPV-HVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLL 209 (383)
Q Consensus 131 ~s~~~~~~~~~~~~~~~~i~vi~ngi-d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll 209 (383)
+|+..++.+.+.|++++++.+++|++ |...+.+... .. +.+ + .++.++++++||+...||++.++
T Consensus 153 ~s~~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~~~~-~~----~~~--~-------~~~~~vl~~~gr~~~~k~~~~ll 218 (376)
T 1v4v_A 153 PTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLG-RL----PEG--L-------PEGPYVTVTMHRRENWPLLSDLA 218 (376)
T ss_dssp SSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHHHHC-CC----CTT--C-------CSSCEEEECCCCGGGGGGHHHHH
T ss_pred CCHHHHHHHHHcCCCcceEEEECCchHHHHhhhhhhh-HH----HHh--c-------CCCCEEEEEeCcccchHHHHHHH
Confidence 99999999999898888999999964 4322111100 00 000 1 23467788899998888999999
Q ss_pred HHHHHHhccCCCeEEEEE-eCCCCCCCchHHHHHHHHhhC---------CCCCccccccccCceEEecCCCCCCChHHHH
Q 043412 210 KAYLEEFSKADGVVLYLL-TNPYHSGRDFGNKIVNFVEDS---------DLEKPDDGWAPAADVFVLPSRGEGWGRPLVE 279 (383)
Q Consensus 210 ~a~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~adi~v~ps~~e~~~~~~~E 279 (383)
+|+.++.++.|++++++. |++ ....+.+++++... +. .++..+|+.||++|.|| + |+ ++|
T Consensus 219 ~a~~~l~~~~~~~~lv~~~g~~----~~~~~~l~~~~~~~~~v~~~g~~g~-~~~~~~~~~ad~~v~~S--~--g~-~lE 288 (376)
T 1v4v_A 219 QALKRVAEAFPHLTFVYPVHLN----PVVREAVFPVLKGVRNFVLLDPLEY-GSMAALMRASLLLVTDS--G--GL-QEE 288 (376)
T ss_dssp HHHHHHHHHCTTSEEEEECCSC----HHHHHHHHHHHTTCTTEEEECCCCH-HHHHHHHHTEEEEEESC--H--HH-HHH
T ss_pred HHHHHHHhhCCCeEEEEECCCC----HHHHHHHHHHhccCCCEEEECCCCH-HHHHHHHHhCcEEEECC--c--CH-HHH
Confidence 999999888889998886 544 12456666665321 11 24568889999999999 3 34 889
Q ss_pred HHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043412 280 AMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDM 358 (383)
Q Consensus 280 a~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 358 (383)
||+||+|||++ +.++..+++++++|++++ . |+++++++|.++++|++.+++|+++
T Consensus 289 A~a~G~PvI~~~~~~~~~~~~~~g~g~lv~-~------------------d~~~la~~i~~ll~d~~~~~~~~~~----- 344 (376)
T 1v4v_A 289 GAALGVPVVVLRNVTERPEGLKAGILKLAG-T------------------DPEGVYRVVKGLLENPEELSRMRKA----- 344 (376)
T ss_dssp HHHTTCCEEECSSSCSCHHHHHHTSEEECC-S------------------CHHHHHHHHHHHHTCHHHHHHHHHS-----
T ss_pred HHHcCCCEEeccCCCcchhhhcCCceEECC-C------------------CHHHHHHHHHHHHhChHhhhhhccc-----
Confidence 99999999987 458888887767777774 2 8999999999999999999999864
Q ss_pred HhcCCHHHHHHHHHHHHHHHHh
Q 043412 359 IQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 359 ~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
.+.|++...++++.+.+.+++.
T Consensus 345 ~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 345 KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp CCSSCCSCHHHHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHHHHhc
Confidence 3557777777888888877654
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=171.55 Aligned_cols=140 Identities=21% Similarity=0.227 Sum_probs=115.7
Q ss_pred CCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHh--hCCC---------C--C
Q 043412 186 TSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVE--DSDL---------E--K 252 (383)
Q Consensus 186 ~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~--~~~~---------~--~ 252 (383)
+++++++|+++|++.+.||++.+++++..+ ++++|+++|++.. .+.++++++ .+++ . +
T Consensus 19 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~-----~~~l~~~~~~~~~~l~~~v~~~g~~~~~ 89 (177)
T 2f9f_A 19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK-----GDHAERYARKIMKIAPDNVKFLGSVSEE 89 (177)
T ss_dssp CCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT-----TSTHHHHHHHHHHHSCTTEEEEESCCHH
T ss_pred cCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc-----HHHHHHHHHhhhcccCCcEEEeCCCCHH
Confidence 356788899999999999999999999886 6899999998743 234555554 3333 2 3
Q ss_pred ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHH
Q 043412 253 PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVD 331 (383)
Q Consensus 253 ~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 331 (383)
++..+|+.||++++||..|++|++++|||+||+|||+++.++..+++.++ +|+++ .. |++
T Consensus 90 e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~------------------d~~ 150 (177)
T 2f9f_A 90 ELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NA------------------DVN 150 (177)
T ss_dssp HHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CS------------------CHH
T ss_pred HHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CC------------------CHH
Confidence 36789999999999999999999999999999999999999999999875 78777 55 999
Q ss_pred HHHHHHHHHhcCHHH-HHHHHHH
Q 043412 332 KLRALMRLVVSNVDE-AKAKGKQ 353 (383)
Q Consensus 332 ~la~~i~~ll~~~~~-~~~~~~~ 353 (383)
+++++|.++++|++. ++++.++
T Consensus 151 ~l~~~i~~l~~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 151 EIIDAMKKVSKNPDKFKKDCFRR 173 (177)
T ss_dssp HHHHHHHHHHHCTTTTHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999999998875 4444443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-21 Score=179.53 Aligned_cols=280 Identities=11% Similarity=0.157 Sum_probs=178.0
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccceeeeec-CCCCHHHHHhc--CCCCEEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKRC--NRMDFVW 129 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~ad~vi 129 (383)
...+..+.+++++++||+||+|......++ ...+.....++ .....+...|.. ..++....+.+ +.+|.++
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv-----~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~ 171 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPV-----GHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHF 171 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCE-----EEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCE-----EEEECCccccccccCCcHHHHHHHHHHhcCEEE
Confidence 456677888999999999999975443222 22222211111 111111111221 23444455443 6789999
Q ss_pred EeChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCC-CCC--ccccCCccc-cccCCCCCCCCcEEEEEeeccc-ccc
Q 043412 130 VPTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNC-DPI--DLASIGKPV-LGLSNMNTSSKEFVFLSVFKWE-YRK 203 (383)
Q Consensus 130 ~~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~-~~~--~~~~~~~~~-l~~~~~~~~~~~~~i~~~g~~~-~~K 203 (383)
++|+..++.+.+.|++++++.+++|+ +|...+.+... ... ....+.+++ +. +++.+++++.+|.. ..|
T Consensus 172 ~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~------~~~~~vlv~~hR~~~~~~ 245 (396)
T 3dzc_A 172 APTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLD------ASKKLILVTGHRRESFGG 245 (396)
T ss_dssp ESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCC------TTSEEEEEECSCBCCCTT
T ss_pred CCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccC------CCCCEEEEEECCcccchh
Confidence 99999999999999998899999995 44322211100 000 000011222 11 23455566665643 347
Q ss_pred CHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CC-----C--CccccccccCceEEecCCCCCCCh
Q 043412 204 GWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DL-----E--KPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 204 ~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~-----~--~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
+++.+++|+.++.+++|++++++.++. ++...+.++++.... ++ . .++..+|+.||++|.+| | |+
T Consensus 246 ~~~~ll~A~~~l~~~~~~~~~v~~~g~---~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~ 318 (396)
T 3dzc_A 246 GFERICQALITTAEQHPECQILYPVHL---NPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GI 318 (396)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEECCB---CHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GG
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeCC---ChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cH
Confidence 799999999999888899999886432 113445555543211 11 1 24458889999999998 3 33
Q ss_pred HHHHHHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
..||+++|+|+|++ +.++..|.+..+.+++++. |++++++++.++++|++.+++|++++
T Consensus 319 -~~EA~a~G~PvV~~~~~~~~~e~v~~G~~~lv~~-------------------d~~~l~~ai~~ll~d~~~~~~m~~~~ 378 (396)
T 3dzc_A 319 -QEEAPSLGKPVLVMRETTERPEAVAAGTVKLVGT-------------------NQQQICDALSLLLTDPQAYQAMSQAH 378 (396)
T ss_dssp -GTTGGGGTCCEEECCSSCSCHHHHHHTSEEECTT-------------------CHHHHHHHHHHHHHCHHHHHHHHTSC
T ss_pred -HHHHHHcCCCEEEccCCCcchHHHHcCceEEcCC-------------------CHHHHHHHHHHHHcCHHHHHHHhhcc
Confidence 48999999999999 6677788887776665542 79999999999999999999998764
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
..|.....++++.+.++
T Consensus 379 -----~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 379 -----NPYGDGKACQRIADILA 395 (396)
T ss_dssp -----CTTCCSCHHHHHHHHHH
T ss_pred -----CCCcCChHHHHHHHHHh
Confidence 34555666666666553
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-20 Score=173.36 Aligned_cols=279 Identities=12% Similarity=0.092 Sum_probs=178.8
Q ss_pred hhhHHHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccceeeeec-CCCCHHHHHh-c-CCCCEE
Q 043412 53 MRNLAVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR-C-NRMDFV 128 (383)
Q Consensus 53 ~~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~ad~v 128 (383)
....+..+.+++++++||+||+|......++ ...+.....++ .....+...|.. .+++....+. + +.+|.+
T Consensus 99 ~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv-----~h~~aglrs~~~~~~~p~~~~r~~~~~~a~~~ 173 (403)
T 3ot5_A 99 TSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKML-----GHVEAGLRTWNKYSPFPEEMNRQLTGVMADIH 173 (403)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEE-----EEESCCCCCSCTTSSTTHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCE-----EEEECCccccccccCCcHHHHHHHHHHhcCEE
Confidence 3456678888999999999999975432221 12111111111 111111111111 1233333333 2 458999
Q ss_pred EEeChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc-ccCHH
Q 043412 129 WVPTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY-RKGWD 206 (383)
Q Consensus 129 i~~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~-~K~~~ 206 (383)
+++|+..++.+.+.|++++++.+++|+ +|...+.+...... ....++ +++.+++++.||... .|+++
T Consensus 174 ~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~--~~~~~l---------~~~~~vlv~~~r~~~~~~~l~ 242 (403)
T 3ot5_A 174 FSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHH--PILENL---------GDNRLILMTAHRRENLGEPMQ 242 (403)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCC--HHHHSC---------TTCEEEEECCCCHHHHTTHHH
T ss_pred ECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcch--HHHHhc---------cCCCEEEEEeCcccccCcHHH
Confidence 999999999999999998999999994 56433322211000 000011 234566677777543 36789
Q ss_pred HHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC------CCC--CccccccccCceEEecCCCCCCChHHH
Q 043412 207 VLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS------DLE--KPDDGWAPAADVFVLPSRGEGWGRPLV 278 (383)
Q Consensus 207 ~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~------~~~--~~v~~~~~~adi~v~ps~~e~~~~~~~ 278 (383)
.+++|+.++.+++|++++++.++. .+...+.++++.... +.. .++..+|+.||+++.+| |...+
T Consensus 243 ~ll~a~~~l~~~~~~~~~v~~~~~---~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~ 314 (403)
T 3ot5_A 243 GMFEAVREIVESREDTELVYPMHL---NPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQE 314 (403)
T ss_dssp HHHHHHHHHHHHCTTEEEEEECCS---CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCC---CHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHH
Confidence 999999999888899999887432 112344454433211 111 25668899999999887 33448
Q ss_pred HHHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 279 EAMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 279 Ea~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
||+++|+|+|++ +.++..|.++.+++++++. |++++++++.++++|++.+++|++++.
T Consensus 315 EA~a~g~PvV~~~~~~~~~e~v~~g~~~lv~~-------------------d~~~l~~ai~~ll~~~~~~~~m~~~~~-- 373 (403)
T 3ot5_A 315 EAPGMGVPVLVLRDTTERPEGIEAGTLKLIGT-------------------NKENLIKEALDLLDNKESHDKMAQAAN-- 373 (403)
T ss_dssp HGGGTTCCEEECCSSCSCHHHHHHTSEEECCS-------------------CHHHHHHHHHHHHHCHHHHHHHHHSCC--
T ss_pred HHHHhCCCEEEecCCCcchhheeCCcEEEcCC-------------------CHHHHHHHHHHHHcCHHHHHHHHhhcC--
Confidence 999999999999 6678888887677776653 899999999999999999999976543
Q ss_pred HHhcCCHHHHHHHHHHHHHHHH
Q 043412 358 MIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
.|.....++++.+.+.+.+
T Consensus 374 ---~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 374 ---PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp ---TTCCSCHHHHHHHHHHHHH
T ss_pred ---cccCCcHHHHHHHHHHHHh
Confidence 3455555666666666554
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=158.12 Aligned_cols=307 Identities=12% Similarity=0.034 Sum_probs=175.5
Q ss_pred CCCCChhHH---HHHHHHHHHhcccCCCceeeeecCCCcccc-------h--hh--cCC-----------ChhhhhHHHH
Q 043412 5 LSGGGYSSE---SWSYILALNEHVKNPRFKLAIEHHGDLQSL-------Q--FW--EGL-----------PHHMRNLAVE 59 (383)
Q Consensus 5 ~~~~G~~~~---~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-------~--~~--~~~-----------~~~~~~~~~~ 59 (383)
++.||.+-| +..++++|+++|+...+ .....+ .+.. + .+ .++ +........+
T Consensus 7 i~~GGTgGHi~palala~~L~~~g~~V~~--vg~~~g-~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (365)
T 3s2u_A 7 IMAGGTGGHVFPALACAREFQARGYAVHW--LGTPRG-IENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQ 83 (365)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHTTCEEEE--EECSSS-THHHHTGGGTCCEEECC--------------CHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHHHHhCCCEEEE--EECCch-HhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 567888777 57899999999875432 222222 1100 0 00 011 1122233456
Q ss_pred HHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHh-cCCCCEEEEeChHHHHH
Q 043412 60 LYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKR-CNRMDFVWVPTDFHVST 138 (383)
Q Consensus 60 l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~vi~~s~~~~~~ 138 (383)
+.+++++++||+|+++....++...+.+.....+. + +++.+.......+. .+.++.++...+..
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~-----v-------ihe~n~~~G~~nr~l~~~a~~v~~~~~~~--- 148 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPL-----V-------IHEQNAVAGTANRSLAPIARRVCEAFPDT--- 148 (365)
T ss_dssp HHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCE-----E-------EEECSSSCCHHHHHHGGGCSEEEESSTTS---
T ss_pred HHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCE-----E-------EEecchhhhhHHHhhccccceeeeccccc---
Confidence 67788999999999986544332222222211111 1 11112222222222 35688887765532
Q ss_pred HHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhcc
Q 043412 139 FIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSK 218 (383)
Q Consensus 139 ~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~ 218 (383)
+ ....++.+++|++..+.+...... ..+. .+...++++.|++...+..+.+.+++..+..+
T Consensus 149 ---~-~~~~k~~~~g~pvr~~~~~~~~~~---------~~~~------~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~ 209 (365)
T 3s2u_A 149 ---F-PASDKRLTTGNPVRGELFLDAHAR---------APLT------GRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE 209 (365)
T ss_dssp ---S-CC---CEECCCCCCGGGCCCTTSS---------CCCT------TSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT
T ss_pred ---c-cCcCcEEEECCCCchhhccchhhh---------cccC------CCCcEEEEECCcCCccccchhhHHHHHhcccc
Confidence 1 234577888888876655433221 1111 23345566667777777777888888777544
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCC-------CCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD-------LEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
.++.++..++. ...+.+.+.....+ +.+++..+|+.||++|.-+ .++++.|++++|+|+|..+
T Consensus 210 -~~~~vi~~~G~-----~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip 279 (365)
T 3s2u_A 210 -IRPAIRHQAGR-----QHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVP 279 (365)
T ss_dssp -TCCEEEEECCT-----TTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC
T ss_pred -cceEEEEecCc-----cccccccceecccccccccccchhhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEec
Confidence 34555444332 22344555555544 3477889999999999543 3689999999999999887
Q ss_pred CCCccc---------cccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Q 043412 292 WSGPTE---------YLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRF 362 (383)
Q Consensus 292 ~~g~~e---------~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~ 362 (383)
.+...+ +.+.+.|++++.. +.+++.|+++|.++++||+.+++|++++++. ....
T Consensus 280 ~p~~~~~~Q~~NA~~l~~~G~a~~l~~~----------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~-~~~~ 342 (365)
T 3s2u_A 280 LPHAIDDHQTRNAEFLVRSGAGRLLPQK----------------STGAAELAAQLSEVLMHPETLRSMADQARSL-AKPE 342 (365)
T ss_dssp -----CCHHHHHHHHHHTTTSEEECCTT----------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHT-CCTT
T ss_pred cCCCCCcHHHHHHHHHHHCCCEEEeecC----------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhc-CCcc
Confidence 654322 3333455555432 1279999999999999999999999999874 3344
Q ss_pred CHHHHHHHHHHHH
Q 043412 363 SPETVAGIVTDHI 375 (383)
Q Consensus 363 s~~~~~~~~~~~~ 375 (383)
..+.+++.+.++.
T Consensus 343 aa~~ia~~i~~la 355 (365)
T 3s2u_A 343 ATRTVVDACLEVA 355 (365)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 4444554444443
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-19 Score=161.44 Aligned_cols=192 Identities=14% Similarity=-0.028 Sum_probs=136.3
Q ss_pred HHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
...+++||.|+++|+.+++.+.+.|++..++.++++. |.. .+... . .+.++++++|+|+
T Consensus 128 ~~~y~~aD~Ii~~S~~~~~~l~~~G~~~~ki~~~~~~-~~~--~~~~~-~-----------------~~~~~~~i~yaG~ 186 (339)
T 3rhz_A 128 IAYYNKADVVVAPSQKMIDKLRDFGMNVSKTVVQGMW-DHP--TQAPM-F-----------------PAGLKREIHFPGN 186 (339)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHHTTCCCSEEEECCSC-CCC--CCCCC-C-----------------CCEEEEEEEECSC
T ss_pred HHHHHHCCEEEECCHHHHHHHHHcCCCcCceeecCCC-Ccc--Ccccc-c-----------------ccCCCcEEEEeCC
Confidence 4458999999999999999999999876777655542 211 11100 0 0235689999999
Q ss_pred cccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCC------
Q 043412 199 WEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRG------ 270 (383)
Q Consensus 199 ~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~------ 270 (383)
+..... ++. + .++++|+++|+|+.. .+. -+..+|.. +++..+++.+|+.+.....
T Consensus 187 l~k~~~----L~~---l---~~~~~f~ivG~G~~~------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~ 249 (339)
T 3rhz_A 187 PERFSF----VKE---W---KYDIPLKVYTWQNVE------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQ 249 (339)
T ss_dssp TTTCGG----GGG---C---CCSSCEEEEESCCCC------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHH
T ss_pred cchhhH----HHh---C---CCCCeEEEEeCCccc------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHH
Confidence 984222 111 1 479999999999542 111 22223332 5667788778887775211
Q ss_pred -CCCChHHHHHHHcCCCEEEcCCCCccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 271 -EGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 271 -e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
..+|.++.||||||+|||+++.++..+++.+ ++|+.++ +.++++++|..+ +++.++
T Consensus 250 ~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~--------------------~~~e~~~~i~~l--~~~~~~ 307 (339)
T 3rhz_A 250 SLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIVK--------------------DVEEAIMKVKNV--NEDEYI 307 (339)
T ss_dssp TTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEES--------------------SHHHHHHHHHHC--CHHHHH
T ss_pred HhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEeC--------------------CHHHHHHHHHHh--CHHHHH
Confidence 3569999999999999999999999999988 5888876 789999999986 467789
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
+|++++++. .+.++++.++++.
T Consensus 308 ~m~~na~~~-a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 308 ELVKNVRSF-NPILRKGFFTRRL 329 (339)
T ss_dssp HHHHHHHHH-THHHHTTHHHHHH
T ss_pred HHHHHHHHH-HHHhhccHHHHHH
Confidence 999999885 4556666555543
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-17 Score=153.48 Aligned_cols=257 Identities=13% Similarity=0.079 Sum_probs=159.3
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhc--CCCCEEEEe
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRC--NRMDFVWVP 131 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ad~vi~~ 131 (383)
.+.+..+.+++++++||+|+++.......+.+.+.....++ ....-|...+. ..++....+.+ +.+|.++++
T Consensus 80 ~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv-----~h~eaglrs~~-~~~pee~nR~~~~~~a~~~~~~ 153 (385)
T 4hwg_A 80 GLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPI-----FHMEAGNRCFD-QRVPEEINRKIIDHISDVNITL 153 (385)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCE-----EEESCCCCCSC-TTSTHHHHHHHHHHHCSEEEES
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCE-----EEEeCCCcccc-ccCcHHHHHHHHHhhhceeecC
Confidence 45677888899999999999997654333322222221112 11111111111 13444333332 568999999
Q ss_pred ChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc---cccCHHH
Q 043412 132 TDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE---YRKGWDV 207 (383)
Q Consensus 132 s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~---~~K~~~~ 207 (383)
++..++.+.+.|++++++.+++|+ +|...+...... ....+.+++ ++++++++++.+|.. ..|+++.
T Consensus 154 te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~--~~~~~~~lg-------l~~~~~iLvt~hr~e~~~~~~~l~~ 224 (385)
T 4hwg_A 154 TEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKIL--KSDILDKLS-------LTPKQYFLISSHREENVDVKNNLKE 224 (385)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHH--HCCHHHHTT-------CCTTSEEEEEECCC-----CHHHHH
T ss_pred CHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcc--hhHHHHHcC-------CCcCCEEEEEeCCchhcCcHHHHHH
Confidence 999999999999998999999985 443211100000 001112222 344567777777643 3478899
Q ss_pred HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHH---Hhh-CCC--C-----CccccccccCceEEecCCCCCCChH
Q 043412 208 LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF---VED-SDL--E-----KPDDGWAPAADVFVLPSRGEGWGRP 276 (383)
Q Consensus 208 ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~---~~~-~~~--~-----~~v~~~~~~adi~v~ps~~e~~~~~ 276 (383)
+++|+.++.+++ ++.+++.... ...+.+++. ... .++ . .++..+++.||+++.+| |..
T Consensus 225 ll~al~~l~~~~-~~~vv~p~~p-----~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv 293 (385)
T 4hwg_A 225 LLNSLQMLIKEY-NFLIIFSTHP-----RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTI 293 (385)
T ss_dssp HHHHHHHHHHHH-CCEEEEEECH-----HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTH
T ss_pred HHHHHHHHHhcC-CeEEEEECCh-----HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccH
Confidence 999999987665 7777775532 223333322 110 010 0 13346789999999776 446
Q ss_pred HHHHHHcCCCEEEcCCC-CccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043412 277 LVEAMSMGLPVIATNWS-GPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAR 355 (383)
Q Consensus 277 ~~Ea~a~G~PvI~~~~~-g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~ 355 (383)
..||+++|+|+|+.... +..|.++.+++.+++. |++++++++.++++|++.++.|++++.
T Consensus 294 ~~EA~alG~Pvv~~~~~ter~e~v~~G~~~lv~~-------------------d~~~i~~ai~~ll~d~~~~~~m~~~~~ 354 (385)
T 4hwg_A 294 TEEASILNLPALNIREAHERPEGMDAGTLIMSGF-------------------KAERVLQAVKTITEEHDNNKRTQGLVP 354 (385)
T ss_dssp HHHHHHTTCCEEECSSSCSCTHHHHHTCCEECCS-------------------SHHHHHHHHHHHHTTCBTTBCCSCCCH
T ss_pred HHHHHHcCCCEEEcCCCccchhhhhcCceEEcCC-------------------CHHHHHHHHHHHHhChHHHHHhhccCC
Confidence 79999999999998663 3567776666666542 899999999999999887776655443
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.2e-17 Score=152.52 Aligned_cols=165 Identities=15% Similarity=0.174 Sum_probs=117.6
Q ss_pred CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 187 SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 187 ~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+++..++++.|++. .++.+.+.+++..+.+. ++++++++++...... ...+...+...+.. ++..+++.||++|.
T Consensus 240 ~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~~~-l~~~~~~v~~~~~~-~~~~~l~~ad~~v~ 314 (412)
T 3otg_A 240 TARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDVSG-LGEVPANVRLESWV-PQAALLPHVDLVVH 314 (412)
T ss_dssp TTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCCTT-CCCCCTTEEEESCC-CHHHHGGGCSEEEE
T ss_pred CCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCChhh-hccCCCcEEEeCCC-CHHHHHhcCcEEEE
Confidence 35567888999885 67777777777776543 5677766655321111 11111222333444 57789999999997
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
++ .+.+++|||++|+|+|+.+.++ ..+.+.+ ++|++++.+ ..|+++++++|.+++
T Consensus 315 ~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~----------------~~~~~~l~~ai~~ll 374 (412)
T 3otg_A 315 HG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPD----------------NISPDSVSGAAKRLL 374 (412)
T ss_dssp SC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGG----------------GCCHHHHHHHHHHHH
T ss_pred CC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcc----------------cCCHHHHHHHHHHHH
Confidence 65 3479999999999999977653 4455544 466666542 128999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
+|++.+++|++.+++. .+.++++.+++.+.+++.+
T Consensus 375 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 375 AEESYRAGARAVAAEI-AAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HCHHHHHHHHHHHHHH-HHSCCHHHHHTTHHHHHC-
T ss_pred hCHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHhcc
Confidence 9999999999998885 6778999999999888754
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.9e-15 Score=139.49 Aligned_cols=161 Identities=14% Similarity=0.116 Sum_probs=111.7
Q ss_pred CCcEEEEEeeccccccCH-HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHH---HHhhCCCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWEYRKGW-DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVN---FVEDSDLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~-~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~adi 263 (383)
++..++++.|+....|+. ..+++++.+. .+.|++++++.+++. ..+.+.. .+.-.+.. +...++..||+
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~-----~~~~l~~~~~~v~~~~~~-~~~~ll~~ad~ 289 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE-----HRALLTDLPDNARIAESV-PLNLFLRTCEL 289 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG-----GGGGCTTCCTTEEECCSC-CGGGTGGGCSE
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc-----chhhcccCCCCEEEeccC-CHHHHHhhCCE
Confidence 456788888988665444 6677777777 777899999998762 1222211 11112222 23567799999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCC----CCccccccC-CCceeeec--ccccccccCCCCcccccCCCHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNW----SGPTEYLTE-ENGYPLLV--GRMSEVTEGPFKGHFWAEPSVDKLRAL 336 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~g~~e~v~~-~~g~~~~~--~~~~~~~~~~~~g~~~~~~~~~~la~~ 336 (383)
+|.. +.+.+++|||++|+|+|+.+. .+..+.+.+ +.|.+++. . ..++++++++
T Consensus 290 ~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~----------------~~~~~~l~~a 349 (391)
T 3tsa_A 290 VICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQA----------------QSDHEQFTDS 349 (391)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHH----------------HTCHHHHHHH
T ss_pred EEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccc----------------cCCHHHHHHH
Confidence 9953 445799999999999999654 233344443 45555553 1 0389999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 337 MRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 337 i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+.++++|++.+++|++.+++. .+..+++.+++.+.+++.
T Consensus 350 i~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 350 IATVLGDTGFAAAAIKLSDEI-TAMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHTCTHHHHHHHHHHHHH-HTSCCHHHHHHHHHHC--
T ss_pred HHHHHcCHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHh
Confidence 999999999999998888774 678899888888776543
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-14 Score=133.88 Aligned_cols=210 Identities=14% Similarity=0.014 Sum_probs=126.6
Q ss_pred CCCEEEEeChHHHHHHHhcCCCCCC-eEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccc
Q 043412 124 RMDFVWVPTDFHVSTFIRSGVDPAK-VVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYR 202 (383)
Q Consensus 124 ~ad~vi~~s~~~~~~~~~~~~~~~~-i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~ 202 (383)
.+|.+++.+....+.... ..+ .+ +..++++++... ... ..... .+++.+++++.|++. .
T Consensus 185 ~~~~~l~~~~~~~~~~~~-~~~-~~~v~~vG~~~~~~~---~~~-~~~~~-------------~~~~~~v~v~~Gs~~-~ 244 (430)
T 2iyf_A 185 HPPRSLVLIPKALQPHAD-RVD-EDVYTFVGACQGDRA---EEG-GWQRP-------------AGAEKVVLVSLGSAF-T 244 (430)
T ss_dssp CCSSEEECSCGGGSTTGG-GSC-TTTEEECCCCC--------CC-CCCCC-------------TTCSEEEEEECTTTC-C
T ss_pred CCCcEEEeCcHHhCCCcc-cCC-CccEEEeCCcCCCCC---CCC-CCccc-------------cCCCCeEEEEcCCCC-C
Confidence 478888887655443322 222 24 777776654211 000 00000 134568899999987 5
Q ss_pred cCHHHHHHHHHHHhccCCCeEE-EEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHH
Q 043412 203 KGWDVLLKAYLEEFSKADGVVL-YLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAM 281 (383)
Q Consensus 203 K~~~~ll~a~~~l~~~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~ 281 (383)
++.+.+.+++..+. +.+++++ +++|.+... +....+...+.-.+..++. .+++.||++|..+ .+.+++|||
T Consensus 245 ~~~~~~~~~~~~l~-~~~~~~~~~~~G~~~~~--~~l~~~~~~v~~~~~~~~~-~~l~~ad~~v~~~----G~~t~~Ea~ 316 (430)
T 2iyf_A 245 KQPAFYRECVRAFG-NLPGWHLVLQIGRKVTP--AELGELPDNVEVHDWVPQL-AILRQADLFVTHA----GAGGSQEGL 316 (430)
T ss_dssp -CHHHHHHHHHHHT-TCTTEEEEEECC---CG--GGGCSCCTTEEEESSCCHH-HHHTTCSEEEECC----CHHHHHHHH
T ss_pred CcHHHHHHHHHHHh-cCCCeEEEEEeCCCCCh--HHhccCCCCeEEEecCCHH-HHhhccCEEEECC----CccHHHHHH
Confidence 55555555554443 2257887 467765321 1101111112223444454 7899999999755 237899999
Q ss_pred HcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043412 282 SMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 282 a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~ 356 (383)
++|+|+|+++..+ ..+.+.+ +.|+.++.+ ..++++++++|.++++|++.++++++.+++
T Consensus 317 ~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~----------------~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~ 380 (430)
T 2iyf_A 317 ATATPMIAVPQAVDQFGNADMLQGLGVARKLATE----------------EATADLLRETALALVDDPEVARRLRRIQAE 380 (430)
T ss_dssp HTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-----------------CCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HhCCCEEECCCccchHHHHHHHHHcCCEEEcCCC----------------CCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 9999999998754 2333333 455555432 117899999999999999999999998887
Q ss_pred HHHhcCCHHHHHHHHHHHHHHH
Q 043412 357 DMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 357 ~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
. .+.++++.+++.+.+++++.
T Consensus 381 ~-~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 381 M-AQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp H-HHHCHHHHHHHHHHTTSCC-
T ss_pred H-HhcCcHHHHHHHHHHHhhcc
Confidence 5 45679999988888776544
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-14 Score=134.34 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=95.8
Q ss_pred CCcEEEEEeecccccc----------CHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHH---HhhCCCCCcc
Q 043412 188 SKEFVFLSVFKWEYRK----------GWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF---VEDSDLEKPD 254 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K----------~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~v 254 (383)
+...++++.|++...| .+..+++++..+ ++++++++++.. .+.+... +.-.+.. +.
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~-----~~~l~~~~~~v~~~~~~-~~ 294 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKL-----AQTLQPLPEGVLAAGQF-PL 294 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC-------------CCTTEEEESCC-CH
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcc-----hhhhccCCCcEEEeCcC-CH
Confidence 4568888899986444 456666665443 688888887621 2222221 1122332 35
Q ss_pred ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC----CccccccC-CCceeeecccccccccCCCCcccccCCC
Q 043412 255 DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS----GPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 255 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
..++..||++|. .+.+.+++|||++|+|+|+.+.. +..+.+.+ +.|++++.+ ..+
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~----------------~~~ 354 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWE----------------QAG 354 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC---------------------
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcc----------------cCC
Confidence 678899999994 44568999999999999996553 44555544 466555432 117
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 330 VDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 330 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
++++++++.++++|++.+++|++.+++. .+..+++.+++.+.
T Consensus 355 ~~~l~~ai~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 355 VESVLAACARIRDDSSYVGNARRLAAEM-ATLPTPADIVRLIE 396 (398)
T ss_dssp --CHHHHHHHHHHCTHHHHHHHHHHHHH-TTSCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHH-HcCCCHHHHHHHHh
Confidence 8999999999999999999999988874 67889998888764
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-13 Score=126.60 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=105.5
Q ss_pred CCcEEEEEeeccccc-cCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYR-KGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~-K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|++... ++.+.+.+++..+.+. ++++++++++.. .+....+...+.-.+.. ++..++..||++|.
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~--~~~l~~~~~~v~~~~~~-~~~~ll~~ad~~v~ 305 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLD--ISPLGTLPRNVRAVGWT-PLHTLLRTCTAVVH 305 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSC--CGGGCSCCTTEEEESSC-CHHHHHTTCSEEEE
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcC--hhhhccCCCcEEEEccC-CHHHHHhhCCEEEE
Confidence 456888999998554 3555555555555433 688999887632 11111111112223333 55678899999995
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEc----CCCCcc--ccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIAT----NWSGPT--EYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~----~~~g~~--e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
. +.+.+++|||++|+|+|+. +..+.. +.+.+ +.|+.++..+ .+++.++ +
T Consensus 306 ~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~----------------~~~~~l~----~ 361 (398)
T 3oti_A 306 H----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDK----------------VDADLLR----R 361 (398)
T ss_dssp C----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGG----------------CCHHHHH----H
T ss_pred C----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCC----------------CCHHHHH----H
Confidence 3 4457999999999999994 445555 66655 5666665321 1556665 8
Q ss_pred HhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
+++|++.+++|++.+++ +....+++.+++.+.+++
T Consensus 362 ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 362 LIGDESLRTAAREVREE-MVALPTPAETVRRIVERI 396 (398)
T ss_dssp HHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHh
Confidence 88999999999888887 478899999998887664
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-12 Score=119.30 Aligned_cols=163 Identities=10% Similarity=0.060 Sum_probs=103.2
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL-LTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|+....+ .+.+..++..+ .+.+ +++++ +|++.. .+....+...+.-.+..++. .++..||++|.
T Consensus 230 ~~~~v~v~~G~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~g~~~~--~~~~~~~~~~v~~~~~~~~~-~ll~~ad~~v~ 303 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEH-PEFFRACAQAF-ADTP-WHVVMAIGGFLD--PAVLGPLPPNVEAHQWIPFH-SVLAHARACLT 303 (402)
T ss_dssp TCCEEEEECCSCSSCC-HHHHHHHHHHH-TTSS-CEEEEECCTTSC--GGGGCSCCTTEEEESCCCHH-HHHTTEEEEEE
T ss_pred CCCEEEEECCCCCcch-HHHHHHHHHHH-hcCC-cEEEEEeCCcCC--hhhhCCCCCcEEEecCCCHH-HHHhhCCEEEE
Confidence 4578888999876544 23333333333 2333 66665 443311 11111111112223444444 88899999996
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCC-C----CccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHH
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNW-S----GPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV 340 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~-~----g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l 340 (383)
.+ ...+++|||++|+|+|+... . +..+.+.+ +.|..++.+ ..+++++++++.++
T Consensus 304 ~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~----------------~~~~~~l~~~~~~l 363 (402)
T 3ia7_A 304 HG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPD----------------QLEPASIREAVERL 363 (402)
T ss_dssp CC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGG----------------GCSHHHHHHHHHHH
T ss_pred CC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCC----------------CCCHHHHHHHHHHH
Confidence 65 23688999999999997654 2 33344433 455544432 12899999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 341 VSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 341 l~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
++|++.++++++.+++ +.+..+++.+++.+.+++++
T Consensus 364 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 364 AADSAVRERVRRMQRD-ILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHCHHHHHHHHHHHHH-HHTSCHHHHHHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHH-HhhCChHHHHHHHHHHHHhh
Confidence 9999999999888776 46778899888888887764
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.30 E-value=4.6e-12 Score=119.85 Aligned_cols=263 Identities=12% Similarity=0.031 Sum_probs=155.2
Q ss_pred HHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHH
Q 043412 57 AVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFH 135 (383)
Q Consensus 57 ~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~ 135 (383)
...+.+.+++.++||++--+....... ..+..++.+.. ....|+-. ... +...|.+++-....
T Consensus 338 ~~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAPVQ------vs~lGyp~--TTG--------l~~iDY~i~D~~~~ 401 (631)
T 3q3e_A 338 LEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQ------AIALGHPA--TTH--------SDFIEYVIVEDDYV 401 (631)
T ss_dssp HHHHHHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSSEE------EEECSSCS--CCC--------CTTCCEEEEEGGGC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCchhHHHHhCCCchhe------EeccCCCc--ccC--------cccCCEEEeCCCCC
Confidence 566778888899999887543221111 11112233322 11112110 011 14567777643211
Q ss_pred HHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCC--CcEEEEEeeccccccCHHHHHHHHH
Q 043412 136 VSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSS--KEFVFLSVFKWEYRKGWDVLLKAYL 213 (383)
Q Consensus 136 ~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~~~g~~~~~K~~~~ll~a~~ 213 (383)
. -..+ ..+++..+|+..= .+.|..... .+...+ ++. +.++|+++++ ..|..+.+++++.
T Consensus 402 -~-~~~~--ysEklirLP~~~~--~~~p~~~~p----~r~~~~-------lp~~~G~v~Fg~fn~--~~Ki~p~~l~~Wa 462 (631)
T 3q3e_A 402 -G-SEEC--FSETLLRLPKDAL--PYVPSALAP----EKVDYL-------LRENPEVVNIGIAST--TMKLNPYFLEALK 462 (631)
T ss_dssp -C-CGGG--CSSEEEEECTTSS--CCCCCTTCC----SSCCCC-------CCSCCSEEEEEEEEC--STTCCHHHHHHHH
T ss_pred -C-cccC--ceeeEEECCCCcc--ccCCcccCC----cccccc-------CCcCCCeEEEEECCc--cccCCHHHHHHHH
Confidence 0 0112 2468888887421 122222111 012222 234 3788888887 4688999999999
Q ss_pred HHhccCCCeEEE--EEeCCCCCCCchHHHHHHHHhhCCCCCcc-----------ccccccCceEEecCCCCCCChHHHHH
Q 043412 214 EEFSKADGVVLY--LLTNPYHSGRDFGNKIVNFVEDSDLEKPD-----------DGWAPAADVFVLPSRGEGWGRPLVEA 280 (383)
Q Consensus 214 ~l~~~~~~~~l~--i~G~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~~adi~v~ps~~e~~~~~~~Ea 280 (383)
++.++.|+..+. +.|.+. .....+.+.+...|+.+++ ...|+.+|+++.|+.+.| |++.+||
T Consensus 463 rIL~~vP~s~L~l~~~g~~~----g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEA 537 (631)
T 3q3e_A 463 AIRDRAKVKVHFHFALGQSN----GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDM 537 (631)
T ss_dssp HHHHHCSSEEEEEEEESSCC----GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHH
T ss_pred HHHHhCCCcEEEEEecCCCc----hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHH
Confidence 999999987664 355321 2223333333444554332 366799999999987654 9999999
Q ss_pred HHcCCCEEEcCCCCcccccc------CC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHH
Q 043412 281 MSMGLPVIATNWSGPTEYLT------EE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQ 353 (383)
Q Consensus 281 ~a~G~PvI~~~~~g~~e~v~------~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~ 353 (383)
|+||+|||+.....+..-+. -+ .++++. .|.+++++...++.+|++.+.+++++
T Consensus 538 LwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-------------------~d~eeYv~~Av~La~D~~~l~~LR~~ 598 (631)
T 3q3e_A 538 VTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-------------------NTVDEYVERAVRLAENHQERLELRRY 598 (631)
T ss_dssp HHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-------------------SSHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-------------------CCHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999987655544432 12 222111 18999999999999999999999998
Q ss_pred HHHHHHh--cCCHHHHHHHHHHHHHHHHh
Q 043412 354 AREDMIQ--RFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 354 a~~~~~~--~~s~~~~~~~~~~~~~~~~~ 380 (383)
.++.... .|+ ...+++.+.|+++++
T Consensus 599 Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 599 IIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 8775433 344 445566666655543
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4.4e-11 Score=111.10 Aligned_cols=160 Identities=14% Similarity=-0.006 Sum_probs=100.8
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCCchHHHHHH---HHhhCCCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL-LTNPYHSGRDFGNKIVN---FVEDSDLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~adi 263 (383)
+...++++.|+..... .+.+-.++..+ .+.+ +++++ +|.+.. .+.+.. .+.-.+..++. .++..||+
T Consensus 246 ~~~~v~v~~Gs~~~~~-~~~~~~~~~al-~~~~-~~~v~~~g~~~~-----~~~l~~~~~~v~~~~~~~~~-~ll~~ad~ 316 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDR-PGFFRDCARAF-DGQP-WHVVMTLGGQVD-----PAALGDLPPNVEAHRWVPHV-KVLEQATV 316 (415)
T ss_dssp CCCEEEEECTTTSCCC-HHHHHHHHHHH-TTSS-CEEEEECTTTSC-----GGGGCCCCTTEEEESCCCHH-HHHHHEEE
T ss_pred CCCEEEEECCCCCCCh-HHHHHHHHHHH-hcCC-cEEEEEeCCCCC-----hHHhcCCCCcEEEEecCCHH-HHHhhCCE
Confidence 4578888989875432 22222233223 3334 77777 443311 111111 11122333333 78899999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCC----CccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWS----GPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMR 338 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~ 338 (383)
+|..+ ...+++||+++|+|+|+.... ...+.+.+ +.|..++.+ ..+++++++++.
T Consensus 317 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~ 376 (415)
T 3rsc_A 317 CVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGE----------------KADGDTLLAAVG 376 (415)
T ss_dssp EEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGG----------------GCCHHHHHHHHH
T ss_pred EEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccC----------------CCCHHHHHHHHH
Confidence 99654 236889999999999996542 23333333 455544432 128999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 339 LVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 339 ~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
++++|++.++++.+.+++ +....+.+.+++.+.+++.+
T Consensus 377 ~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 377 AVAADPALLARVEAMRGH-VRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HHHTCHHHHHHHHHHHHH-HHHSCHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHhhc
Confidence 999999999999888776 46778888888888777653
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=9.4e-10 Score=101.00 Aligned_cols=155 Identities=17% Similarity=0.156 Sum_probs=107.3
Q ss_pred CCcEEEEEeeccccc-------cCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHH---HhhCCCCCccccc
Q 043412 188 SKEFVFLSVFKWEYR-------KGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF---VEDSDLEKPDDGW 257 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~-------K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~ 257 (383)
+...++++.|++... +.+..+++++..+ ++++++++++ ...+.+... +.- +.. +...+
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~-----~~~~~l~~~~~~v~~-~~~-~~~~~ 276 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPD-----TVAEALRAEVPQARV-GWT-PLDVV 276 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCH-----HHHHHHHHHCTTSEE-ECC-CHHHH
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCC-----CCHHhhCCCCCceEE-cCC-CHHHH
Confidence 346789999998764 5677777777543 6788887654 223333322 112 332 34678
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHH
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
+..||++|..+ .+.+++|||++|+|+|+.+..+ ..+.+.+ +.|+.++.+ ..++++
T Consensus 277 l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~----------------~~~~~~ 336 (384)
T 2p6p_A 277 APTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPG----------------EDSTEA 336 (384)
T ss_dssp GGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTT----------------CCCHHH
T ss_pred HhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcC----------------CCCHHH
Confidence 89999999753 4578999999999999998743 4444443 456555432 127999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 333 LRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
++++|.++++|++.++++++.+++. ...-..+.+++.+.++.
T Consensus 337 l~~~i~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 337 IADSCQELQAKDTYARRAQDLSREI-SGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHH-HTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHh
Confidence 9999999999999999998888764 56667777776666554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.2e-10 Score=92.46 Aligned_cols=133 Identities=11% Similarity=0.062 Sum_probs=85.2
Q ss_pred CCcEEEEEeeccc---cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCcccccc--ccCc
Q 043412 188 SKEFVFLSVFKWE---YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWA--PAAD 262 (383)
Q Consensus 188 ~~~~~i~~~g~~~---~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~ad 262 (383)
+...++++.|++. +.|.+..+++++..+ +.++++++++... +.+...+.-.+...+ ..++ ..||
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~-----~~~~~~v~~~~~~~~-~~~l~~~~ad 88 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKP-----DTLGLNTRLYKWIPQ-NDLLGHPKTR 88 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCC-----TTCCTTEEEESSCCH-HHHHTSTTEE
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCc-----ccCCCcEEEecCCCH-HHHhcCCCcC
Confidence 3467899999885 567777777777432 4678777765321 111111222233222 3445 8999
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
++|.. +.+.+++|||++|+|+|+.+..+ ..+.+.+ +.|+.++.. ..++++++++|
T Consensus 89 ~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i 148 (170)
T 2o6l_A 89 AFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFN----------------TMSSTDLLNAL 148 (170)
T ss_dssp EEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTT----------------TCCHHHHHHHH
T ss_pred EEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccc----------------cCCHHHHHHHH
Confidence 99964 34689999999999999998742 2333443 455544422 12899999999
Q ss_pred HHHhcCHHHHHHHH
Q 043412 338 RLVVSNVDEAKAKG 351 (383)
Q Consensus 338 ~~ll~~~~~~~~~~ 351 (383)
.++++|++.++++.
T Consensus 149 ~~ll~~~~~~~~a~ 162 (170)
T 2o6l_A 149 KRVINDPSYKENVM 162 (170)
T ss_dssp HHHHHCHHHHHHHH
T ss_pred HHHHcCHHHHHHHH
Confidence 99999987554443
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=98.98 E-value=7.1e-10 Score=103.80 Aligned_cols=160 Identities=18% Similarity=0.147 Sum_probs=105.8
Q ss_pred CCcEEEEEeecccc-----ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCc
Q 043412 188 SKEFVFLSVFKWEY-----RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAAD 262 (383)
Q Consensus 188 ~~~~~i~~~g~~~~-----~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ad 262 (383)
+...++++.|++.. .+.+..+++++..+ ++++++.+++... ... ..+...+.-.+..++ ..++..||
T Consensus 266 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-~~l-~~~~~~v~~~~~~~~-~~ll~~ad 337 (441)
T 2yjn_A 266 ERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQL-EGV-ANIPDNVRTVGFVPM-HALLPTCA 337 (441)
T ss_dssp SSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTT-SSC-SSCCSSEEECCSCCH-HHHGGGCS
T ss_pred CCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcch-hhh-ccCCCCEEEecCCCH-HHHHhhCC
Confidence 34678899998865 37788888888553 6788887765221 111 001011122233333 56789999
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
++|.. +.+.+++||+++|+|+|+.+..+ ..+.+.+ +.|+.++.. ..++++++++|
T Consensus 338 ~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i 397 (441)
T 2yjn_A 338 ATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVP----------------ELTPDQLRESV 397 (441)
T ss_dssp EEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTT----------------TCCHHHHHHHH
T ss_pred EEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccc----------------cCCHHHHHHHH
Confidence 99963 44579999999999999998743 3344443 455555432 12899999999
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 338 RLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 338 ~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
.++++|++.++++.+.+++ +......+.+++.+.+++.
T Consensus 398 ~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 398 KRVLDDPAHRAGAARMRDD-MLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHH
Confidence 9999999999999888776 4677888888888777654
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.91 E-value=4.3e-09 Score=101.80 Aligned_cols=238 Identities=14% Similarity=0.068 Sum_probs=154.3
Q ss_pred cCCCCEEEEeChHHHHHHHh------cCCCCCCeEEecCCCcCCCCC----CCCC----------C--------------
Q 043412 122 CNRMDFVWVPTDFHVSTFIR------SGVDPAKVVKIVQPVHVGFFD----PVNC----------D-------------- 167 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~------~~~~~~~i~vi~ngid~~~~~----~~~~----------~-------------- 167 (383)
+..++.|-.+|+...+.++. +..-++++.-|.||||...+. |... .
T Consensus 400 i~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~ 479 (796)
T 2c4m_A 400 CYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSY 479 (796)
T ss_dssp HHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGG
T ss_pred HHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhh
Confidence 57899999999999998874 223456899999999988772 2200 0
Q ss_pred CCc---------cccCCcccc-----ccCCCCCCCCcEEEEEeeccccccCHHH-HHHHHHHHhc--cC-----CCeEEE
Q 043412 168 PID---------LASIGKPVL-----GLSNMNTSSKEFVFLSVFKWEYRKGWDV-LLKAYLEEFS--KA-----DGVVLY 225 (383)
Q Consensus 168 ~~~---------~~~~~~~~l-----~~~~~~~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~--~~-----~~~~l~ 225 (383)
... .....+..+ ...++.++++.++++++.|+..+|+.++ ++..+.++.+ +. .+++++
T Consensus 480 ~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~I 559 (796)
T 2c4m_A 480 ADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVI 559 (796)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEE
Confidence 000 000001110 0012456788999999999999999999 8888776653 22 369999
Q ss_pred EEeCCCCCCCchHHH---HHHHHh----hCCCCC--cc-----------ccccccCceEEecCC--CCCCChHHHHHHHc
Q 043412 226 LLTNPYHSGRDFGNK---IVNFVE----DSDLEK--PD-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSM 283 (383)
Q Consensus 226 i~G~~~~~~~~~~~~---~~~~~~----~~~~~~--~v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~ 283 (383)
+.|.+.+........ +.++++ .-.+.+ ++ ..++..||++++||+ .|++|++-|=+|..
T Consensus 560 f~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N 639 (796)
T 2c4m_A 560 FGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN 639 (796)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT
T ss_pred EEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 999985432222111 333333 112333 22 366799999999999 99999999999999
Q ss_pred CCCEEEcCCCCccccccC---CCceeeecccccccccCCCCcccccCCCHHHHHHH---HHHHhcCHHHHHHHHHHHHHH
Q 043412 284 GLPVIATNWSGPTEYLTE---ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL---MRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 284 G~PvI~~~~~g~~e~v~~---~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~---i~~ll~~~~~~~~~~~~a~~~ 357 (383)
|++.|++-.|...|+.++ +|||++... ..++.++... ..-.-.+++ .+++..++
T Consensus 640 GaL~iGtLDGanvEi~e~vG~~NgF~FG~~----------------~~ev~~l~~~y~a~~~y~~~~~-~~~vvd~~--- 699 (796)
T 2c4m_A 640 GALTLGTMDGANVEIVDSVGEENAYIFGAR----------------VEELPALRESYKPYELYETVPG-LKRALDAL--- 699 (796)
T ss_dssp TCEEEEESSTHHHHHHHHHCGGGSEEESCC----------------TTTHHHHHHTCCHHHHHHHSTT-HHHHHHTT---
T ss_pred CCeEEeccCCeEeehhhhcCCCcEEEecCc----------------hhhHHHHHHhhChHHHhhcCHH-HHHHHHHH---
Confidence 999999988877777643 577777541 0256555543 222223443 33333332
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHh
Q 043412 358 MIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+...|||+.- .+|..+|+.++.
T Consensus 700 ~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 700 DNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp TSSSSCCTTC-CHHHHHHHHHHS
T ss_pred HcCCCCCCCH-HHHHHHHHHHHh
Confidence 2357888776 778888888764
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=6.8e-08 Score=95.41 Aligned_cols=176 Identities=11% Similarity=0.079 Sum_probs=129.9
Q ss_pred CCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC-cc---------
Q 043412 185 NTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-PD--------- 254 (383)
Q Consensus 185 ~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~v--------- 254 (383)
+++++.++|+++.++ .|=-+..++++.+++++.|+-+|++.... ......+.+.++..|+.. ++
T Consensus 518 gLp~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~----~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 518 GLPEDAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFP----AVGEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp TCCTTSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETT----GGGHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCCCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCc----HHHHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 367899999988764 57778899999999999999999998754 244677888888888862 22
Q ss_pred --ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHH
Q 043412 255 --DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 255 --~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
...++.+|+++-|.-+ +.+.+..||+++|+|||+-....+..=+. .+++-..+ +++. -..|.++
T Consensus 592 ~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~--~s~l~~~g-l~e~----------ia~~~~~ 657 (723)
T 4gyw_A 592 EHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVA--ASQLTCLG-CLEL----------IAKNRQE 657 (723)
T ss_dssp HHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHH--HHHHHHHT-CGGG----------BCSSHHH
T ss_pred HHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHH--HHHHHHcC-Cccc----------ccCCHHH
Confidence 2456899999988655 44899999999999999986432222111 00110000 1111 1128999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHh
Q 043412 333 LRALMRLVVSNVDEAKAKGKQAREDMIQ--RFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~a~~~~~~--~~s~~~~~~~~~~~~~~~~~ 380 (383)
+.+...++-+|++.+.++...-++.... -|+-..+++.+++.|+++-+
T Consensus 658 Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 658 YEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888877766544 69999999999999998754
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.83 E-value=4.9e-08 Score=94.86 Aligned_cols=234 Identities=15% Similarity=0.037 Sum_probs=151.4
Q ss_pred cCCCCEEEEeChHHHHHHHh------cCCCCCCeEEecCCCcCCCC----CCCCCC----C-----------------Cc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR------SGVDPAKVVKIVQPVHVGFF----DPVNCD----P-----------------ID 170 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~------~~~~~~~i~vi~ngid~~~~----~~~~~~----~-----------------~~ 170 (383)
+..++.|-.+|+-..+.++. +...++++.-|-|||+...+ .|.... . ..
T Consensus 435 i~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~ 514 (824)
T 2gj4_A 435 IAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYV 514 (824)
T ss_dssp HHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGT
T ss_pred HHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhcc
Confidence 68899999999999988863 12235789999999998877 221100 0 00
Q ss_pred --cc---------cCCccc----ccc-CCCCCCCCcEEEEEeeccccccCHHHH-HHHHHHHhc--cCC-----CeEEEE
Q 043412 171 --LA---------SIGKPV----LGL-SNMNTSSKEFVFLSVFKWEYRKGWDVL-LKAYLEEFS--KAD-----GVVLYL 226 (383)
Q Consensus 171 --~~---------~~~~~~----l~~-~~~~~~~~~~~i~~~g~~~~~K~~~~l-l~a~~~l~~--~~~-----~~~l~i 226 (383)
.. ...+.. +.. .++.++++.++++++.|+..+|+.+++ +..+.++.+ +.| ++++++
T Consensus 515 ~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If 594 (824)
T 2gj4_A 515 DDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMI 594 (824)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence 00 000011 000 134567889999999999999999997 777766641 233 689999
Q ss_pred EeCCCCCCCchHHH---HHHHHhhCCC----CC--cc-----------ccccccCceEEecCC--CCCCChHHHHHHHcC
Q 043412 227 LTNPYHSGRDFGNK---IVNFVEDSDL----EK--PD-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMG 284 (383)
Q Consensus 227 ~G~~~~~~~~~~~~---~~~~~~~~~~----~~--~v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G 284 (383)
.|.+.+........ +.++++..+- .+ ++ ..++..||++++||+ .|++|++-|=||..|
T Consensus 595 ~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNG 674 (824)
T 2gj4_A 595 GGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNG 674 (824)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTT
T ss_pred EEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence 99985432222111 3444432221 22 12 366699999999999 999999999999999
Q ss_pred CCEEEcCCCCccccc---cCCCceeeecccccccccCCCCcccccCCCHHHHHHHHH-------HHhcCHHHHHHHHHHH
Q 043412 285 LPVIATNWSGPTEYL---TEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMR-------LVVSNVDEAKAKGKQA 354 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v---~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~-------~ll~~~~~~~~~~~~a 354 (383)
++.|++-.|...|+. ..+|||++.. .++++ .+++ .++++....+++..+.
T Consensus 675 aLtigtlDGanvEi~e~vG~~Ngf~FG~-------------------~~~ev-~~l~~~~~~a~~~Y~~~~~l~~v~d~i 734 (824)
T 2gj4_A 675 ALTIGTMDGANVEMAEEAGEENFFIFGM-------------------RVEDV-DRLDQRGYNAQEYYDRIPELRQIIEQL 734 (824)
T ss_dssp CEEEECSCTTHHHHHHHHCGGGSEECSC-------------------CHHHH-HHHHHHCCCHHHHHHHCHHHHHHHHHH
T ss_pred ceEEEEecCccchhhhccCCCCEEEeCC-------------------cHHHH-HHHHHcCCCHHHHhcCCHHHHHHHHHH
Confidence 999999887776765 3457777763 35555 3332 2333222333333433
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
+...|+|+.- .+|..+|+.++
T Consensus 735 ---~~g~fs~~~~-~~y~~ly~~l~ 755 (824)
T 2gj4_A 735 ---SSGFFSPKQP-DLFKDIVNMLM 755 (824)
T ss_dssp ---HHTTTCTTST-TTTHHHHHHHH
T ss_pred ---HhCCCCCCCh-HHHHHHHHHHH
Confidence 3468998776 67888888775
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=6.3e-08 Score=93.76 Aligned_cols=235 Identities=14% Similarity=0.064 Sum_probs=152.4
Q ss_pred cCCCCEEEEeChHHHHHHHh------cCCCCCCeEEecCCCcCCCC----CCCC-------------------------C
Q 043412 122 CNRMDFVWVPTDFHVSTFIR------SGVDPAKVVKIVQPVHVGFF----DPVN-------------------------C 166 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~------~~~~~~~i~vi~ngid~~~~----~~~~-------------------------~ 166 (383)
+..++.|-.+|+...+.++. +..-++++.-|.|||+...+ .|.. .
T Consensus 411 i~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~ 490 (796)
T 1l5w_A 411 VVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFA 490 (796)
T ss_dssp HHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGG
T ss_pred HHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcC
Confidence 57799999999999998874 22345689999999987655 2210 0
Q ss_pred CC------C-ccccCCcccc-----ccCCCCCCCCcEEEEEeeccccccCHHH-HHHHHHHHhc--cC-----CCeEEEE
Q 043412 167 DP------I-DLASIGKPVL-----GLSNMNTSSKEFVFLSVFKWEYRKGWDV-LLKAYLEEFS--KA-----DGVVLYL 226 (383)
Q Consensus 167 ~~------~-~~~~~~~~~l-----~~~~~~~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~--~~-----~~~~l~i 226 (383)
.. . ......+..+ ...++.++++.++++++.|+..+|+.++ ++..+.++.+ .. .++++++
T Consensus 491 ~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If 570 (796)
T 1l5w_A 491 DDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLF 570 (796)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEE
Confidence 00 0 0000001110 0013456788999999999999999999 7887766653 12 3699999
Q ss_pred EeCCCCCCCchHHH---HHHHHh----hCCCCC--cc-----------ccccccCceEEecCC--CCCCChHHHHHHHcC
Q 043412 227 LTNPYHSGRDFGNK---IVNFVE----DSDLEK--PD-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMG 284 (383)
Q Consensus 227 ~G~~~~~~~~~~~~---~~~~~~----~~~~~~--~v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G 284 (383)
.|.+.+........ +.++++ .-.+.+ ++ ..++..||++++||+ .|++|++-|=+|..|
T Consensus 571 ~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG 650 (796)
T 1l5w_A 571 GAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 650 (796)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTT
T ss_pred EecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence 99985432222111 333333 112223 22 366799999999999 999999999999999
Q ss_pred CCEEEcCCCCccccccC---CCceeeecccccccccCCCCcccccCCCHHHHHHH-------HHHHhcCHHHHHHHHHHH
Q 043412 285 LPVIATNWSGPTEYLTE---ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL-------MRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v~~---~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~-------i~~ll~~~~~~~~~~~~a 354 (383)
++.|++-.|...|+.++ +|||++.. +++++.+. ..-.-.+|+ .+++..++
T Consensus 651 aL~iGtLDGanvEi~e~vG~~NgF~FG~-------------------~~~ev~~l~~~~y~a~~~y~~~~~-~~~vvd~~ 710 (796)
T 1l5w_A 651 ALTVGTLDGANVEIAEKVGEENIFIFGH-------------------TVEQVKAILAKGYDPVKWRKKDKV-LDAVLKEL 710 (796)
T ss_dssp CEEEECSCTTHHHHHHHHCGGGSEECSC-------------------CHHHHHHHHHHCCCHHHHHHHCHH-HHHHHHHH
T ss_pred CeeecCcCCeeeehhhccCCCcEEEecC-------------------CHHHHHHHHHcccCHHHHhhcCHH-HHHHHHHH
Confidence 99999988887777643 46666643 56665532 222223553 44444443
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 355 REDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+...|||+.- .+|..+|+.++.
T Consensus 711 ---~~g~fs~~~~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 711 ---ESGKYSDGDK-HAFDQMLHSIGK 732 (796)
T ss_dssp ---HHTTTTTTCT-TTTHHHHHHTST
T ss_pred ---HcCCCCCCcH-HHHHHHHHHHhc
Confidence 3468999775 778888887753
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=98.69 E-value=8.4e-08 Score=89.16 Aligned_cols=162 Identities=14% Similarity=0.058 Sum_probs=97.6
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL-LTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|+.. .+..+.+.+++..+.. .++++++ +|.+.. .+....+..-+.-.+...+. .++..||++|.
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~~d~~v~ 327 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVD--PADLGEVPPNVEVHQWVPQL-DILTKASAFIT 327 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSC--GGGGCSCCTTEEEESSCCHH-HHHTTCSEEEE
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCC--hHHhccCCCCeEEecCCCHH-HHHhhCCEEEE
Confidence 4568888899876 3344444444444422 4677754 565421 11000010111112333343 68899999885
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
. +...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++.+ ..++++++++|.+++
T Consensus 328 ~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~~ll 387 (424)
T 2iya_A 328 H----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRD----------------QVTAEKLREAVLAVA 387 (424)
T ss_dssp C----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGG----------------GCCHHHHHHHHHHHH
T ss_pred C----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcC----------------CCCHHHHHHHHHHHH
Confidence 3 33479999999999999998742 2222322 444444321 128999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+|++.++++.+.+++ +......+..++.+.++++
T Consensus 388 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 388 SDPGVAERLAAVRQE-IREAGGARAAADILEGILA 421 (424)
T ss_dssp HCHHHHHHHHHHHHH-HHTSCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-HHhcCcHHHHHHHHHHHHh
Confidence 999988888777666 3555566666666655543
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.53 E-value=2e-07 Score=86.38 Aligned_cols=156 Identities=12% Similarity=-0.068 Sum_probs=96.1
Q ss_pred CcEEEEEeecc-ccccCHHHHHHHHHHHhccCCCeEEEEE-eCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 189 KEFVFLSVFKW-EYRKGWDVLLKAYLEEFSKADGVVLYLL-TNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 189 ~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+..++++.|++ ...+..+.+++++..+ +.+++++ |.+.... ..+.+.+.-.+...+ ..++..||++|.
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~----~~~~~~v~~~~~~~~-~~~l~~~d~~v~ 307 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLVL----PDDGADCFAIGEVNH-QVLFGRVAAVIH 307 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCCC----SSCGGGEEECSSCCH-HHHGGGSSEEEE
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCcccc----cCCCCCEEEeCcCCh-HHHHhhCCEEEe
Confidence 46788899998 4777888888888664 3456555 5442110 111111222333333 356799999996
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
.+ ...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++.. ..+.++++++|.++
T Consensus 308 ~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~~l- 366 (415)
T 1iir_A 308 HG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGP----------------IPTFDSLSAALATA- 366 (415)
T ss_dssp CC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSS----------------SCCHHHHHHHHHHH-
T ss_pred CC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcC----------------CCCHHHHHHHHHHH-
Confidence 43 3479999999999999998743 2333333 455544321 12899999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+|++.++++.+.+++ +....-+++..+.++++++
T Consensus 367 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 367 LTPETHARATAVAGT-----IRTDGAAVAARLLLDAVSR 400 (415)
T ss_dssp TSHHHHHHHHHHHHH-----SCSCHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHH-----HhhcChHHHHHHHHHHHHh
Confidence 998877776665543 2334455555566665554
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=4.1e-07 Score=83.67 Aligned_cols=157 Identities=13% Similarity=0.096 Sum_probs=88.6
Q ss_pred CCcEEEEEeeccccccC-HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYRKG-WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~-~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|++...++ .+.+.+++..+.. .+..+++.+++.... ....+.+.+.-.+. -....++..+|++|.
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~--~~~~~~~~v~~~~~-~p~~~lL~~~~~~v~ 310 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLA--LLGELPANVRVVEW-IPLGALLETCDAIIH 310 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCC--CCCCCCTTEEEECC-CCHHHHHTTCSEEEE
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCcccc--ccccCCCCEEEEee-cCHHHHhhhhhheec
Confidence 45678888888755433 3344444444432 356666665542211 00000000111111 123467789999884
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
.+...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++ +.+..+++|++++
T Consensus 311 ----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~--------------------~~~~~~~al~~lL 366 (400)
T 4amg_A 311 ----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAE--------------------AGSLGAEQCRRLL 366 (400)
T ss_dssp ----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECC--------------------TTTCSHHHHHHHH
T ss_pred ----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcC--------------------CCCchHHHHHHHH
Confidence 345578999999999999977643 2222222 4444443 3344578899999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
+|++.+++..+-+.+ +...-+....++.++++
T Consensus 367 ~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 367 DDAGLREAALRVRQE-MSEMPPPAETAAXLVAL 398 (400)
T ss_dssp HCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHh
Confidence 999987776665554 46666777777666553
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.4e-06 Score=80.36 Aligned_cols=156 Identities=12% Similarity=-0.008 Sum_probs=93.6
Q ss_pred CCcEEEEEeeccc-cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWE-YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
++..++++.|+.. ..+.+..+++++..+ ++++++.++....... .....+.-.+..+ ...++..||++|.
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~~---~~~~~v~~~~~~~-~~~ll~~~d~~v~ 290 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGRI---DEGDDCLVVGEVN-HQVLFGRVAAVVH 290 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCCS---SCCTTEEEESSCC-HHHHGGGSSEEEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCcccccc---cCCCCEEEecCCC-HHHHHhhCcEEEE
Confidence 3467888889887 566677777777664 5677776554221100 0000111112222 2567899999995
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
.+ ...++.||+++|+|+|+....+. .+.+.+ +.|..++.. ..+.+++++++.+++
T Consensus 291 ~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~----------------~~~~~~l~~ai~~ll 350 (404)
T 3h4t_A 291 HG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGP----------------TPTVESLSAALATAL 350 (404)
T ss_dssp CC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSS----------------SCCHHHHHHHHHHHT
T ss_pred CC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcC----------------CCCHHHHHHHHHHHh
Confidence 44 34789999999999999876432 122222 445444321 128999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
+ ++.++++.+.+... .. -..+..++.+.+++
T Consensus 351 ~-~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 351 T-PGIRARAAAVAGTI-RT-DGTTVAAKLLLEAI 381 (404)
T ss_dssp S-HHHHHHHHHHHTTC-CC-CHHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHHH-hh-hHHHHHHHHHHHHH
Confidence 8 88777766655432 22 34444555444443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.23 E-value=4.9e-07 Score=83.74 Aligned_cols=137 Identities=12% Similarity=-0.025 Sum_probs=84.4
Q ss_pred CcEEEEEeeccc---cccCHHHHHHHHHHHhccCCCeEEEEE-eCCCCCCCchHHHHHHHHhhCCCCCccccccccCceE
Q 043412 189 KEFVFLSVFKWE---YRKGWDVLLKAYLEEFSKADGVVLYLL-TNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVF 264 (383)
Q Consensus 189 ~~~~i~~~g~~~---~~K~~~~ll~a~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~ 264 (383)
+..++++.|+.. ..+..+.+++++..+ +++++++ |.+... . ..+.+.+.-.+..+ ...++..||++
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~---~-~~~~~~v~~~~~~~-~~~ll~~~d~~ 306 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV---L-PDDRDDCFAIDEVN-FQALFRRVAAV 306 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC---C-SCCCTTEEEESSCC-HHHHGGGSSEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc---c-cCCCCCEEEeccCC-hHHHhccCCEE
Confidence 356788888874 456667777777654 3566665 544211 0 00000111112222 35677999999
Q ss_pred EecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
|. .+...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++.. ..+.++++++|.+
T Consensus 307 v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~~ 366 (416)
T 1rrv_A 307 IH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGP----------------TPTFESLSAALTT 366 (416)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSS----------------CCCHHHHHHHHHH
T ss_pred Ee----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCC----------------CCCHHHHHHHHHH
Confidence 96 334569999999999999987632 2222322 444444321 2389999999999
Q ss_pred HhcCHHHHHHHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQARE 356 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~ 356 (383)
+ +|++.++++.+.+++
T Consensus 367 l-~~~~~~~~~~~~~~~ 382 (416)
T 1rrv_A 367 V-LAPETRARAEAVAGM 382 (416)
T ss_dssp H-TSHHHHHHHHHHTTT
T ss_pred h-hCHHHHHHHHHHHHH
Confidence 9 999877777665443
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=9.9e-05 Score=73.29 Aligned_cols=228 Identities=14% Similarity=0.146 Sum_probs=118.6
Q ss_pred HhcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
....+.|.+++.|+...+.+.+ ++.+++++..++.+-....+..............+ +++++++.+|+|.-.
T Consensus 474 ~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~-------~~~~~~kk~ILyaPT 546 (729)
T 3l7i_A 474 RETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTH-------LNLPSDKKVIMYAPT 546 (729)
T ss_dssp HHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHH-------TTCCSSCEEEEECCC
T ss_pred HhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHH-------hCCCCCCeEEEEeee
Confidence 3457899999999999999888 78776677666554322222111111000001112 224678899999876
Q ss_pred ccccc----C-----HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHH-----HHHHHhhCCCCCccccccccCceE
Q 043412 199 WEYRK----G-----WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK-----IVNFVEDSDLEKPDDGWAPAADVF 264 (383)
Q Consensus 199 ~~~~K----~-----~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~adi~ 264 (383)
+.... + ...-++.+.+.. .++..+++-.-. -.... +...+....-..++..++..||++
T Consensus 547 ~r~~~~~~~~~~~~~~~~~~~~l~~~l--~~~~~li~r~Hp-----~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~l 619 (729)
T 3l7i_A 547 WRDDEFVSKGKYLFELKIDLDNLYKEL--GDDYVILLRMHY-----LISNALDLSGYENFAIDVSNYNDVSELFLISDCL 619 (729)
T ss_dssp CCGGGCCGGGSSCCCCTTCHHHHHHHH--TTTEEEEECCCH-----HHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEE
T ss_pred eeCCccccccccccchhhHHHHHHHHc--CCCeEEEEecCc-----chhccccccccCCcEEeCCCCcCHHHHHHHhCEE
Confidence 64421 1 111233333322 246777665321 00000 000000111124667899999999
Q ss_pred EecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~ 344 (383)
|.= ++-++.|++..++|||..... ..++..+..|+.++... ..+ |... .+.++|.++|.....++
T Consensus 620 ITD-----ySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~---~~p----g~~~--~~~~eL~~~i~~~~~~~ 684 (729)
T 3l7i_A 620 ITD-----YSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYME---DLP----GPIY--TEPYGLAKELKNLDKVQ 684 (729)
T ss_dssp EES-----SCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTS---SSS----SCEE--SSHHHHHHHHTTHHHHH
T ss_pred Eee-----chHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhH---hCC----CCeE--CCHHHHHHHHhhhhccc
Confidence 832 456899999999999987542 33333333566555321 111 2221 28999999998876544
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 345 DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 345 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
+...+..++-++.. -.|+-...++++.+.+-+
T Consensus 685 ~~~~~~~~~~~~~~-~~~~dg~as~ri~~~i~~ 716 (729)
T 3l7i_A 685 QQYQEKIDAFYDRF-CSVDNGKASQYIGDLIHK 716 (729)
T ss_dssp HHTHHHHHHHHHHH-STTCCSCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHh-CCccCChHHHHHHHHHHh
Confidence 33332222222211 123333555666555543
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00098 Score=62.16 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=76.2
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhh----CCCCCccccccc--cC
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVED----SDLEKPDDGWAP--AA 261 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~--~a 261 (383)
+...++++.|..... ..+.+.+++..+... +++++++.+... .....+.+.+.... .+...+ ..++. ++
T Consensus 270 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~-~~~l~~~~~~~~~~~~~v~~w~pq-~~vL~h~~~ 344 (456)
T 2c1x_A 270 PTSVVYISFGTVTTP-PPAEVVALSEALEAS--RVPFIWSLRDKA-RVHLPEGFLEKTRGYGMVVPWAPQ-AEVLAHEAV 344 (456)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHHH--TCCEEEECCGGG-GGGSCTTHHHHHTTTEEEESCCCH-HHHHTSTTE
T ss_pred CcceEEEecCccccC-CHHHHHHHHHHHHhc--CCeEEEEECCcc-hhhCCHHHHhhcCCceEEecCCCH-HHHhcCCcC
Confidence 456888888876532 234443444333222 355555443211 00111122221111 122222 24556 56
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc----ccc-cC-CCceeeecccccccccCCCCcccccCCCHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT----EYL-TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRA 335 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~----e~v-~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~ 335 (383)
|++| ..+...+++||+++|+|+|+-+..+-- ..+ +. +.|..++. ..-+.+++.+
T Consensus 345 ~~fv----th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~----------------~~~~~~~l~~ 404 (456)
T 2c1x_A 345 GAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG----------------GVFTKSGLMS 404 (456)
T ss_dssp EEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG----------------GSCCHHHHHH
T ss_pred CEEE----ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC----------------CCcCHHHHHH
Confidence 7777 334567999999999999999763211 111 12 33332221 1128999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHH
Q 043412 336 LMRLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 336 ~i~~ll~~~~~~~~~~~~a~~ 356 (383)
+++++++|++ .++|.+++++
T Consensus 405 ~i~~ll~~~~-~~~~r~~a~~ 424 (456)
T 2c1x_A 405 CFDQILSQEK-GKKLRENLRA 424 (456)
T ss_dssp HHHHHHHSHH-HHHHHHHHHH
T ss_pred HHHHHHCCCc-HHHHHHHHHH
Confidence 9999999985 4556666555
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0026 Score=59.83 Aligned_cols=150 Identities=13% Similarity=0.056 Sum_probs=78.0
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC--CCC-chHHHHHHHHhhC----CCCCcccccccc
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH--SGR-DFGNKIVNFVEDS----DLEKPDDGWAPA 260 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~--~~~-~~~~~~~~~~~~~----~~~~~v~~~~~~ 260 (383)
+...++++.|.... ...+.+.+.+..+.. .+.+++++.+... ... ...+.+.+..... +...+. .+++.
T Consensus 294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~-~~L~h 369 (482)
T 2pq6_A 294 PGSVVYVNFGSTTV-MTPEQLLEFAWGLAN--CKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD-KVLNH 369 (482)
T ss_dssp TTCEEEEECCSSSC-CCHHHHHHHHHHHHH--TTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH-HHHTS
T ss_pred CCceEEEecCCccc-CCHHHHHHHHHHHHh--cCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH-HHhcC
Confidence 45678888887642 233444444444422 2467766644311 000 0122222222111 222222 46666
Q ss_pred CceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCccccc-CCCHHHHHHHHHH
Q 043412 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWA-EPSVDKLRALMRL 339 (383)
Q Consensus 261 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~la~~i~~ 339 (383)
+++-++-+ .+...+++||+++|+|+|+-+..+ |.. .|+..+. ...+.|+.+. ..+.+++.++|++
T Consensus 370 ~~~~~~vt--h~G~~s~~Eal~~GvP~i~~P~~~--dQ~--~na~~~~--------~~~G~g~~l~~~~~~~~l~~~i~~ 435 (482)
T 2pq6_A 370 PSIGGFLT--HCGWNSTTESICAGVPMLCWPFFA--DQP--TDCRFIC--------NEWEIGMEIDTNVKREELAKLINE 435 (482)
T ss_dssp TTEEEEEE--CCCHHHHHHHHHHTCCEEECCCST--THH--HHHHHHH--------HTSCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCCEEEe--cCCcchHHHHHHcCCCEEecCccc--chH--HHHHHHH--------HHhCEEEEECCCCCHHHHHHHHHH
Confidence 56522222 345679999999999999998742 110 1111110 0012233332 1389999999999
Q ss_pred HhcCHHHHHHHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQARE 356 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~ 356 (383)
+++|++ .++|.+++++
T Consensus 436 ll~~~~-~~~~r~~a~~ 451 (482)
T 2pq6_A 436 VIAGDK-GKKMKQKAME 451 (482)
T ss_dssp HHTSHH-HHHHHHHHHH
T ss_pred HHcCCc-HHHHHHHHHH
Confidence 999986 3556666655
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0048 Score=57.23 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=75.8
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC----CCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS----DLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~adi 263 (383)
+...++++.|..... ..+.+.+.+..+... +.+++++-+... .....+.+.+..... +...+ ..+++.+++
T Consensus 272 ~~~vVyvsfGS~~~~-~~~~~~el~~~l~~~--~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv~w~Pq-~~vL~h~~v 346 (454)
T 3hbf_A 272 NSSVVYISFGSVVTP-PPHELTALAESLEEC--GFPFIWSFRGDP-KEKLPKGFLERTKTKGKIVAWAPQ-VEILKHSSV 346 (454)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHHH--CCCEEEECCSCH-HHHSCTTHHHHTTTTEEEESSCCH-HHHHHSTTE
T ss_pred CCceEEEecCCCCcC-CHHHHHHHHHHHHhC--CCeEEEEeCCcc-hhcCCHhHHhhcCCceEEEeeCCH-HHHHhhcCc
Confidence 456788888876532 233344444333222 456666544310 000011111111111 12122 366688885
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
.++-++ +.-.+++||+++|+|+|+-+..+- ...+.+ +.|..++.+ ..+.+++.+++
T Consensus 347 ~~fvtH--~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~----------------~~~~~~l~~av 408 (454)
T 3hbf_A 347 GVFLTH--SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG----------------VLTKESIKKAL 408 (454)
T ss_dssp EEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGG----------------SCCHHHHHHHH
T ss_pred CeEEec--CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCC----------------CCCHHHHHHHH
Confidence 444343 345699999999999999886321 111111 333322211 13899999999
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 043412 338 RLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 338 ~~ll~~~~~~~~~~~~a~~ 356 (383)
++++++++ .++|.+++++
T Consensus 409 ~~ll~~~~-~~~~r~~a~~ 426 (454)
T 3hbf_A 409 ELTMSSEK-GGIMRQKIVK 426 (454)
T ss_dssp HHHHSSHH-HHHHHHHHHH
T ss_pred HHHHCCCh-HHHHHHHHHH
Confidence 99998853 3445555544
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0029 Score=54.68 Aligned_cols=89 Identities=7% Similarity=-0.061 Sum_probs=58.0
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC------CCCCccccccccCce
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS------DLEKPDDGWAPAADV 263 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~adi 263 (383)
+.++++.|..++..-...+++++.. ... -.+++|.+. ...+.+++..... +..+++..+|+.||+
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~~----~~~-i~vv~G~~~----~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl 228 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELPK----TKI-ISIATSSSN----PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK 228 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSCT----TSC-EEEEECTTC----TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE
T ss_pred CeEEEEECCCchhhHHHHHHHHhhc----CCC-EEEEECCCc----hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE
Confidence 5667777776554333344444422 223 345566652 3456666655432 334788999999999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+|.+ .|.++.|++++|+|.|..+.
T Consensus 229 vI~~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 229 LIIS-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEE-----SSHHHHHHHHTTCCEEEECC
T ss_pred EEEC-----CcHHHHHHHHcCCCEEEEeC
Confidence 9973 25899999999999988764
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.047 Score=50.88 Aligned_cols=139 Identities=15% Similarity=0.105 Sum_probs=72.4
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHH--hhC----CCCCccccccc--
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFV--EDS----DLEKPDDGWAP-- 259 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~--~~~----~~~~~v~~~~~-- 259 (383)
+...++++.|.....-+.+.+.+++..+.. .+.+++++.+.. .....+.+.+.. ... +...+. .++.
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~--~~~~~l~~~~~~--~~~l~~~~~~~~~~~~~~~v~~w~pq~-~vL~h~ 349 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKH--SGVRFLWSNSAE--KKVFPEGFLEWMELEGKGMICGWAPQV-EVLAHK 349 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHH--HTCEEEEECCCC--GGGSCTTHHHHHHHHCSEEEESSCCHH-HHHHST
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHh--CCCcEEEEECCC--cccCChhHHHhhccCCCEEEEccCCHH-HHhCCC
Confidence 456888888887522233334344433322 246776665431 001112222222 111 122332 3454
Q ss_pred cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----ccc-ccC-CCceee-ecccccccccCCCCccccc--CCCH
Q 043412 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEY-LTE-ENGYPL-LVGRMSEVTEGPFKGHFWA--EPSV 330 (383)
Q Consensus 260 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~-v~~-~~g~~~-~~~~~~~~~~~~~~g~~~~--~~~~ 330 (383)
++|+|| ..+...+++||+++|+|+|+-+..+- ... +.. +.|..+ ... . -. ..+.
T Consensus 350 ~~~~fv----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~---------~----~~~~~~~~ 412 (463)
T 2acv_A 350 AIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY---------R----KGSDVVAA 412 (463)
T ss_dssp TEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSC---------C----TTCCCCCH
T ss_pred ccCeEE----ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEeccc---------C----CCCccccH
Confidence 567777 33456799999999999999977321 112 222 333333 100 0 01 2389
Q ss_pred HHHHHHHHHHhc-CHHHHH
Q 043412 331 DKLRALMRLVVS-NVDEAK 348 (383)
Q Consensus 331 ~~la~~i~~ll~-~~~~~~ 348 (383)
+++.++|+++++ +++.++
T Consensus 413 ~~l~~ai~~ll~~~~~~r~ 431 (463)
T 2acv_A 413 EEIEKGLKDLMDKDSIVHK 431 (463)
T ss_dssp HHHHHHHHHHTCTTCTHHH
T ss_pred HHHHHHHHHHHhccHHHHH
Confidence 999999999997 344433
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.052 Score=50.83 Aligned_cols=137 Identities=8% Similarity=0.016 Sum_probs=72.4
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC-----------CCc----hHHHHHHHHhhCCC--
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS-----------GRD----FGNKIVNFVEDSDL-- 250 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~-----------~~~----~~~~~~~~~~~~~~-- 250 (383)
+...++++.|.... ...+.+.+.+..+.. .+.+++++.+.... +.. ..+.+.+..+..|+
T Consensus 267 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v 343 (480)
T 2vch_A 267 LGSVLYVSFGSGGT-LTCEQLNELALGLAD--SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 343 (480)
T ss_dssp TTCEEEEECTTTCC-CCHHHHHHHHHHHHH--TTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEE
T ss_pred CCceEEEecccccC-CCHHHHHHHHHHHHh--cCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEE
Confidence 45788888898743 234444444444432 24566665443210 011 11223322222221
Q ss_pred ---CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-cC-CCceeeecccccccccCCCC
Q 043412 251 ---EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYL-TE-ENGYPLLVGRMSEVTEGPFK 321 (383)
Q Consensus 251 ---~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v-~~-~~g~~~~~~~~~~~~~~~~~ 321 (383)
..+ ..+++.+++.++-+. +.-.+++||+++|+|+|+-+..+ ....+ .. +.|..++.. .
T Consensus 344 ~~w~Pq-~~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~----------~ 410 (480)
T 2vch_A 344 PFWAPQ-AQVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG----------D 410 (480)
T ss_dssp ESCCCH-HHHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC----------T
T ss_pred eCccCH-HHHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecc----------c
Confidence 122 256677775333332 44579999999999999988732 11221 22 344333211 0
Q ss_pred cccccCCCHHHHHHHHHHHhcC
Q 043412 322 GHFWAEPSVDKLRALMRLVVSN 343 (383)
Q Consensus 322 g~~~~~~~~~~la~~i~~ll~~ 343 (383)
+ ...+.++++++|++++++
T Consensus 411 ~---~~~~~~~l~~av~~vl~~ 429 (480)
T 2vch_A 411 D---GLVRREEVARVVKGLMEG 429 (480)
T ss_dssp T---SCCCHHHHHHHHHHHHTS
T ss_pred C---CccCHHHHHHHHHHHhcC
Confidence 0 023899999999999983
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=95.02 E-value=0.069 Score=47.47 Aligned_cols=94 Identities=12% Similarity=0.084 Sum_probs=60.6
Q ss_pred CCcEEEEEeec-cccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC---------CCC----
Q 043412 188 SKEFVFLSVFK-WEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS---------DLE---- 251 (383)
Q Consensus 188 ~~~~~i~~~g~-~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~---------~~~---- 251 (383)
++.++.+..|. ..+.|.+ +.+.++++.|.++ ++++++.|+. ...+..++..+.. .+.
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~-----~e~~~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSA-----KDHEAGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCG-----GGHHHHHHHHTTSCHHHHTTEEECTTTSC
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeCh-----hhHHHHHHHHHhhhhccccceEeccCcCC
Confidence 34577777776 5466665 4788888888665 7889998865 2233333333221 111
Q ss_pred -CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 252 -KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 252 -~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
.++..+++.||++|.... | .+-.|.++|+|+|+--.+
T Consensus 252 l~e~~ali~~a~l~I~~Ds----g-~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 252 LDQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVALYGP 289 (348)
T ss_dssp HHHHHHHHHTSSEEEEESS----H-HHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHHHhCCEEEecCC----H-HHHHHHHcCCCEEEEECC
Confidence 345688899999998752 3 334499999999986543
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.071 Score=44.08 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=33.2
Q ss_pred CCCCccccccc-cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 249 DLEKPDDGWAP-AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 249 ~~~~~v~~~~~-~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
++.+++..+++ .||++|. -+...+++|++++|+|.|.-+..
T Consensus 120 ~f~~~m~~~l~~~AdlvIs----haGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 120 DFSTKMQSIIRDYSDLVIS----HAGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp CSSSSHHHHHHHHCSCEEE----SSCHHHHHHHHHTTCCCCEECCS
T ss_pred eccchHHHHHHhcCCEEEE----CCcHHHHHHHHHhCCCEEEEcCc
Confidence 44477788899 9999993 34567999999999998887764
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=93.46 E-value=0.19 Score=44.83 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=62.6
Q ss_pred CcEEEEEeeccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-----C-----Ccccc
Q 043412 189 KEFVFLSVFKWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-----E-----KPDDG 256 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-----~-----~~v~~ 256 (383)
+..+.+..|.-.+.|.+ +.+.+++..+.++ +.++++.|+. ...+..++.....+. . .++..
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~-----~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~a 257 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGP-----MDLEMVQPVVEQMETKPIVATGKFQLGPLAA 257 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCT-----TTHHHHHHHHHTCSSCCEECTTCCCHHHHHH
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCc-----chHHHHHHHHHhcccccEEeeCCCCHHHHHH
Confidence 45667777764456654 5788888877765 5678888764 223344444433321 1 23567
Q ss_pred ccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccc
Q 043412 257 WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYL 299 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v 299 (383)
+++.||++|.... |..-+ |.++|+|+|+--.+..+...
T Consensus 258 li~~a~~~i~~Ds----G~~Hl-Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 258 AMNRCNLLITNDS----GPMHV-GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp HHHTCSEEEEESS----HHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred HHHhCCEEEECCC----CHHHH-HHhcCCCEEEEECCCCcccc
Confidence 8899999997642 44444 99999999997554444443
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=92.25 E-value=0.57 Score=41.08 Aligned_cols=134 Identities=10% Similarity=0.040 Sum_probs=75.1
Q ss_pred CCcEEEEEeeccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC---CC-----Cccccc
Q 043412 188 SKEFVFLSVFKWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD---LE-----KPDDGW 257 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~---~~-----~~v~~~ 257 (383)
++..+.+..|.-.+.|.+ +.+.+.++.|.++ +.++++.++++ ...+..++..+..+ +. .++..+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~----~e~~~~~~i~~~~~~~~l~g~~sl~el~al 250 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAP----HEEERAKRLAEGFAYVEVLPKMSLEGVARV 250 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSH----HHHHHHHHHHTTCTTEEECCCCCHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCH----HHHHHHHHHHhhCCcccccCCCCHHHHHHH
Confidence 445677777765555654 4777888777543 67888874331 22233333333221 11 245677
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC-C-CceeeecccccccccCCCCcccccCCCHHHHHH
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRA 335 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~ 335 (383)
++.||++|.... |..=+ |.|+|+|+|+--.+..+..... + +...+... ..-...-+++++.+
T Consensus 251 i~~a~l~I~~DS----G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~-----------~~cm~~I~~~~V~~ 314 (326)
T 2gt1_A 251 LAGAKFVVSVDT----GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP-----------GNELSQLTANAVKQ 314 (326)
T ss_dssp HHTCSEEEEESS----HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG-----------GGCGGGCCHHHHHH
T ss_pred HHhCCEEEecCC----cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC-----------cccccCCCHHHHHH
Confidence 899999997742 44444 7779999998743332322221 1 11111100 01122338889999
Q ss_pred HHHHHhcC
Q 043412 336 LMRLVVSN 343 (383)
Q Consensus 336 ~i~~ll~~ 343 (383)
++.++++.
T Consensus 315 ~i~~~l~~ 322 (326)
T 2gt1_A 315 FIEENAEK 322 (326)
T ss_dssp HHHHTTTT
T ss_pred HHHHHHHH
Confidence 99888764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 383 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 9e-14 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-08 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 9e-08 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 70.1 bits (170), Expect = 9e-14
Identities = 49/368 (13%), Positives = 108/368 (29%), Gaps = 20/368 (5%)
Query: 22 NEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPGAW 81
P ++ + H D Q+ + + L + +
Sbjct: 121 IGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLA 180
Query: 82 YPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVP-----TDFHV 136
P + F+ +T VSP + + +F + HV
Sbjct: 181 LPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHV 240
Query: 137 STFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSV 196
I +G+D + + N ++ K + +F +
Sbjct: 241 LHGIVNGIDADVWNPATDHLIHDNYSAANLKN---RALNKKAVAEHFRIDDDGSPLFCVI 297
Query: 197 FKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDG 256
+ ++KG D++ +A E S +V+ + G + ++
Sbjct: 298 SRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEP 357
Query: 257 WAP----AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRM 312
+ D ++PSR E G + A+ G + G + + +
Sbjct: 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVID--------ANH 409
Query: 313 SEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372
+ + G ++ ++D L+ +R V + K + + M S E AG+
Sbjct: 410 AALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLYA 469
Query: 373 DHIKDILS 380
++S
Sbjct: 470 ALYSQLIS 477
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 54.1 bits (128), Expect = 1e-08
Identities = 41/318 (12%), Positives = 84/318 (26%), Gaps = 42/318 (13%)
Query: 71 VVICHSEPGAWYPPLFDTLPCPPT-----------PGYGDFMAVIGRTMFETDRVSPEHV 119
VV H + L P F + + PEH
Sbjct: 123 VVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHT 182
Query: 120 KRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVL 179
V + + + K+ + + F++
Sbjct: 183 GGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKS--- 239
Query: 180 GLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGN 239
L + + F+ + +++ + +L +E S +
Sbjct: 240 -LLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG 298
Query: 240 KIVNFVEDSDLEKPDDGWAP---------AADVFVLPSRGEGWGRPLVEAMSMGLPVIAT 290
+ E K + D ++PS E +G +EAM +G IA+
Sbjct: 299 WARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIAS 358
Query: 291 NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAK 350
G + +T E G + G E+ A+++ + + +
Sbjct: 359 AVGGLRDIITNETGILVKAGDPGELAN-----------------AILKALELSRSDLSKF 401
Query: 351 GKQAREDMIQRFSPETVA 368
+ ++ FS E A
Sbjct: 402 RENCKK-RAMSFSWEKSA 418
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 51.4 bits (122), Expect = 9e-08
Identities = 42/312 (13%), Positives = 92/312 (29%), Gaps = 61/312 (19%)
Query: 108 MFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCD 167
+F +++ D + T+ F+ + +V H + +
Sbjct: 162 IFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTE 221
Query: 168 PIDLASIGKPVLGLSNMNTSSK----------EFVFLSVFKWEYRKGWDVLLKAY---LE 214
+ K + + K SV + +Y KG AY LE
Sbjct: 222 VYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLE 281
Query: 215 EFSKADG-VVLYLLTNPYHSG----RDFGNKIVNFVEDSDLEKPDDGWAP---------- 259
++ + G + + +D +++ N + + GW P
Sbjct: 282 KYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDR 341
Query: 260 --------AADVFVLPSRGEGWGRPLVEAMSMGLP-----VIATNWSGPTEYLTEENGYP 306
+DV ++ +G E ++ P ++ + ++G LT
Sbjct: 342 KLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS----A 397
Query: 307 LLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366
L+V P+ A AL R + ++ E ++ + + +I +
Sbjct: 398 LIV--------NPYDRDEVAA-------ALDRALTMSLAERISRHAEMLD-VIVKNDINH 441
Query: 367 VAGIVTDHIKDI 378
+K I
Sbjct: 442 WQECFISDLKQI 453
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 383 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.88 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.94 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.67 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.54 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.51 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 97.86 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 97.78 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 97.67 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 97.67 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 97.64 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.15 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 96.81 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 96.73 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 94.98 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 94.06 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 91.28 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=2e-38 Score=299.47 Aligned_cols=244 Identities=14% Similarity=0.124 Sum_probs=180.1
Q ss_pred HhcCCCCEEEEeChHHHHHHHh--c--------CCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccc--------c
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIR--S--------GVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG--------L 181 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~--~--------~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~--------~ 181 (383)
..+..+|.++++|...++.... + .....++.+|+||+|.+.|.|................+ .
T Consensus 202 ~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~ 281 (477)
T d1rzua_ 202 GGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVA 281 (477)
T ss_dssp HHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHH
T ss_pred HHHHhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHH
Confidence 3456799999999988775422 1 12345899999999999887754432211100000000 0
Q ss_pred CCCCC-CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---------
Q 043412 182 SNMNT-SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--------- 251 (383)
Q Consensus 182 ~~~~~-~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------- 251 (383)
...++ +++.++|+++||+.++||++.+++|+.++.++ +.+++++|.|+. .....+.+....++..
T Consensus 282 ~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~ 356 (477)
T d1rzua_ 282 EHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDV---ALEGALLAAASRHHGRVGVAIGYNE 356 (477)
T ss_dssp HHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCH---HHHHHHHHHHHHTTTTEEEEESCCH
T ss_pred HhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhh--CCeEEEEecCCc---hHHHHHHHHHhhcCCeEEEEcccCh
Confidence 00111 34678999999999999999999999998765 678999998732 3344444544444322
Q ss_pred CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCH
Q 043412 252 KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSV 330 (383)
Q Consensus 252 ~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (383)
+....+++.||++|+||.+|+||++++|||+||+|||+|+.||++|++.++ +|..++. ..+|+++++.|+
T Consensus 357 ~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~---------~~~G~l~~~~d~ 427 (477)
T d1rzua_ 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASK---------AATGVQFSPVTL 427 (477)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTT---------CCCBEEESSCSH
T ss_pred hHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccC---------CCceEEeCCCCH
Confidence 233467899999999999999999999999999999999999999999875 3333322 246666777799
Q ss_pred HHHHHHHHHHhc---CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 331 DKLRALMRLVVS---NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 331 ~~la~~i~~ll~---~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++|+++|.++++ |++.+++|++++. +++|||+++++++.++|++++.
T Consensus 428 ~~la~ai~~~l~~~~~~~~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 428 DGLKQAIRRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhhCCHHHHHHHHHHHH---HhhCCHHHHHHHHHHHHHHHhC
Confidence 999999998775 8999999998874 5689999999999999999873
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3e-37 Score=280.93 Aligned_cols=334 Identities=16% Similarity=0.085 Sum_probs=225.9
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCC-----h--hhhhHHHHHHhhhcCCCccEEEecCCC
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLP-----H--HMRNLAVELYNTECRTNETVVICHSEP 78 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~l~~~~~~~~pDiV~~~~~~ 78 (383)
.-||.++++.+++++|.++|+..++.. ....++..+.-....++ . ........+...++..++|+||.+...
T Consensus 11 p~GG~e~~~~~la~~L~~~G~~V~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~ 89 (370)
T d2iw1a1 11 PFGGLQRDFMRIASTVAARGHHVRVYT-QSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKM 89 (370)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCEEEEE-SEECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCCSEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEe-cCCCCCCCCceEEEEcCccccccchhhHHHHHHHHHHHHhcccceeeecccC
Confidence 349999999999999999998766422 11122211110011111 1 122334456667778899999998654
Q ss_pred CCCCCcccccCCCCCCCCCCCcccccceeeeecCCC--CHHH---HHhcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEe
Q 043412 79 GAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRV--SPEH---VKRCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKI 152 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi 152 (383)
+.+.. ++.. ... .........+.......+. ...+ ......++.+++.++...+.+.+ .+.+++++.++
T Consensus 90 ~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi 164 (370)
T d2iw1a1 90 PGLDV-YFAA---DVC-YAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQIL 164 (370)
T ss_dssp TTCSE-EECC---SCC-HHHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEEC
T ss_pred chHHH-HHHh---hcc-cceeeeeecCccccccchhchhHHHHHHHHhhccCceEEEecHHHHHHHHHhcCCCcceEEEE
Confidence 32211 1100 000 0000000000000000000 0001 11135678899999988887766 78888899999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
+||+|.+.+.+..........+... +++++.++++++|++.++||++.+++|+.++.++.++..+.++|++.
T Consensus 165 ~~gv~~~~~~~~~~~~~~~~~r~~~-------~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~- 236 (370)
T d2iw1a1 165 PPGIYPDRKYSEQIPNSREIYRQKN-------GIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQD- 236 (370)
T ss_dssp CCCCCGGGSGGGSCTTHHHHHHHHT-------TCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSS-
T ss_pred EeecccccccccCchhhhhhhhhcc-------CCCccceEEEEEeccccccchhhhcccccccccccccceeeeccccc-
Confidence 9999987664433322111111222 24678999999999999999999999999998888888888877762
Q ss_pred CCCchHHHHHHHHhhCCC---------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-
Q 043412 233 SGRDFGNKIVNFVEDSDL---------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE- 302 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~- 302 (383)
....++++++.++. .+++..+|+.||++++||..|+||++++|||+||+|||+|+.+|.+|++.++
T Consensus 237 ----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~ 312 (370)
T d2iw1a1 237 ----KPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADAN 312 (370)
T ss_dssp ----CCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHT
T ss_pred ----cccccccccccccccccccccccccccccccccccccccccccccccceeeecccCCeeEEEeCCCChHHHhcCCC
Confidence 23455566655444 4677899999999999999999999999999999999999999999999874
Q ss_pred Cceee-ecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 303 NGYPL-LVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 303 ~g~~~-~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+|+++ ++. |+++++++|.++++|++++++|+++|++++ +.|+|..+.+++.++|+
T Consensus 313 ~G~l~~~~~------------------d~~~la~~i~~ll~d~~~~~~~~~~ar~~~-~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 313 CGTVIAEPF------------------SQEQLNEVLRKALTQSPLRMAWAENARHYA-DTQDLYSLPEKAADIIT 368 (370)
T ss_dssp CEEEECSSC------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHSCCSCHHHHHHHHHH
T ss_pred ceEEEcCCC------------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-HHhChhHHHHHHHHHHh
Confidence 77655 444 999999999999999999999999999975 55777666777766664
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=2.1e-35 Score=275.37 Aligned_cols=232 Identities=16% Similarity=0.122 Sum_probs=181.9
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccc--cCCccccccCCCCCCCCcEEEEEeec
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLA--SIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
...+|.+++.+......... ++.+..++.+++||+|.+.+.+......... ......++ ..+.++++++|+
T Consensus 184 ~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~G~ 257 (437)
T d2bisa1 184 GYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG------MDEGVTFMFIGR 257 (437)
T ss_dssp HHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTT------CCSCEEEEEESC
T ss_pred HHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhh------ccCCceEEEeec
Confidence 45689999999988776544 5566679999999999988876433221100 00011111 245788999999
Q ss_pred cc-cccCHHHHHHHHHHHhcc--CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC---------CCccccccccCceEEe
Q 043412 199 WE-YRKGWDVLLKAYLEEFSK--ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL---------EKPDDGWAPAADVFVL 266 (383)
Q Consensus 199 ~~-~~K~~~~ll~a~~~l~~~--~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~adi~v~ 266 (383)
+. +.||++.+++|+..+..+ .++++|+++|.++. .....++.+....+. .+++..+++.||++++
T Consensus 258 ~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adi~v~ 334 (437)
T d2bisa1 258 FDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVII 334 (437)
T ss_dssp BCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH---HHHHHHHHHHHTCTTEEEECSCCCHHHHHHHHTTCSEEEE
T ss_pred ccccchhHHHHHhhhcccccccccccceeeeeccccc---ccccchhhhccccccceeccccCcHHHHHHHHhhhccccc
Confidence 86 579999999999888544 57899999998732 223333333333321 1456788999999999
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHH
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVD 345 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~ 345 (383)
||..|++|++++|||+||+|||+|+.||..|++++++|+++++. |+++++++|.++++ |++
T Consensus 335 ~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~~~G~~~~~~------------------d~~~la~~i~~ll~~~~~ 396 (437)
T d2bisa1 335 PSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAG------------------DPGELANAILKALELSRS 396 (437)
T ss_dssp CCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCTTTCEEECTT------------------CHHHHHHHHHHHHTTTTS
T ss_pred cccccccchHHHHHHHCCCCEEEeCCCCcHHhEECCcEEEECCC------------------CHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999999999988888888876 99999999999987 778
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 346 EAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 346 ~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
.+++|++++++.+ ++|||+++++++.++|++++++
T Consensus 397 ~~~~~~~~~~~~~-~~~s~~~~a~~~~~iY~~~i~r 431 (437)
T d2bisa1 397 DLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDR 431 (437)
T ss_dssp CTHHHHHHHHHHH-HHSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHh
Confidence 8999999999975 6799999999999999998865
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=7.4e-27 Score=192.92 Aligned_cols=179 Identities=18% Similarity=0.189 Sum_probs=140.7
Q ss_pred CCcCCCCCCCCCCCCccc----cCCccccccCCCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHHhcc--CCCeEEEEE
Q 043412 155 PVHVGFFDPVNCDPIDLA----SIGKPVLGLSNMNTSSKEFVFLSVFKWE-YRKGWDVLLKAYLEEFSK--ADGVVLYLL 227 (383)
Q Consensus 155 gid~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~--~~~~~l~i~ 227 (383)
|||++.|.+......... ...+++ + ++..+|+++||+. ++||++.++++++.+.++ .++++|+++
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~-------l-~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~ 72 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFG-------M-DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII 72 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTT-------C-CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhC-------C-CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEE
Confidence 788888876543222111 112222 3 5777899999996 689999999999998654 578999999
Q ss_pred eCCCCCCCchHHHHHHHHhhCCC-------C--CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcccc
Q 043412 228 TNPYHSGRDFGNKIVNFVEDSDL-------E--KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEY 298 (383)
Q Consensus 228 G~~~~~~~~~~~~~~~~~~~~~~-------~--~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~ 298 (383)
|.|.. .+....+.+...... . +++..+|+.||++++||..|++|++++|||+||+|||+++.++..|+
T Consensus 73 G~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~ 149 (196)
T d2bfwa1 73 GKGDP---ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDI 149 (196)
T ss_dssp CCBCH---HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHH
T ss_pred eeccc---chhhhhhhhhhccceeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeeecCCCcccee
Confidence 98732 333434444344321 1 45779999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhcCC
Q 043412 299 LTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 299 v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s 363 (383)
+.+++|++++++ |+++++++|.+++. +++.+++|+++|++++ +.||
T Consensus 150 i~~~~g~~~~~~------------------~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a-~~fs 196 (196)
T d2bfwa1 150 ITNETGILVKAG------------------DPGELANAILKALELSRSDLSKFRENCKKRA-MSFS 196 (196)
T ss_dssp CCTTTCEEECTT------------------CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHTC
T ss_pred ecCCceeeECCC------------------CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCC
Confidence 988888888877 99999999999887 7889999999999985 4576
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=9.1e-26 Score=209.23 Aligned_cols=282 Identities=11% Similarity=0.058 Sum_probs=193.1
Q ss_pred cEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhc-----CC
Q 043412 70 TVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRS-----GV 144 (383)
Q Consensus 70 DiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~-----~~ 144 (383)
|+|++|.......+..+.........++...........+............+-.+|.|...+....+.+.+. +.
T Consensus 124 d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~ 203 (456)
T d1uqta_ 124 DIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRV 203 (456)
T ss_dssp CEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCE
T ss_pred CeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCc
Confidence 8999997655444444433222111011000000011122223344555666788999999998888766531 11
Q ss_pred ------------CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHH
Q 043412 145 ------------DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAY 212 (383)
Q Consensus 145 ------------~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~ 212 (383)
...++.++|+|+|...|........... .....- ...++.+|+++||+++.||++.+++|+
T Consensus 204 ~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~-~~~l~~------~~~~~~~il~V~Rld~~KGi~~~l~A~ 276 (456)
T d1uqta_ 204 TTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKA------ELKNVQNIFSVERLDYSKGLPERFLAY 276 (456)
T ss_dssp EEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHH------HTTTCEEEEEECCBCGGGCHHHHHHHH
T ss_pred ccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHH-HHHHHH------hcCCCeEEEEeCCCchhhchHHHHHHH
Confidence 1236788999999877754222111110 000000 024688999999999999999999999
Q ss_pred HHHhccCCC----eEEEEEeCCCCCCCchH----HHHHHHHhh-------CCCC-----------CccccccccCceEEe
Q 043412 213 LEEFSKADG----VVLYLLTNPYHSGRDFG----NKIVNFVED-------SDLE-----------KPDDGWAPAADVFVL 266 (383)
Q Consensus 213 ~~l~~~~~~----~~l~i~G~~~~~~~~~~----~~~~~~~~~-------~~~~-----------~~v~~~~~~adi~v~ 266 (383)
.++++++|+ +.++.+|.+...+.... .++.+++.. .+.. +++..+|+.||+++.
T Consensus 277 ~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~ 356 (456)
T d1uqta_ 277 EALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLV 356 (456)
T ss_dssp HHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEE
T ss_pred HHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeec
Confidence 999988875 67888887755433322 233333322 2332 344678899999999
Q ss_pred cCCCCCCChHHHHHHHcCCC-----EEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLP-----VIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~P-----vI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
||..||||++++|||+||+| +|+|+.+|..+.+.+ |++|+|. |++++|++|.+++
T Consensus 357 ~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~~--g~lVnP~------------------d~~~~A~ai~~aL 416 (456)
T d1uqta_ 357 TPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS--ALIVNPY------------------DRDEVAAALDRAL 416 (456)
T ss_dssp CCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCTT--SEEECTT------------------CHHHHHHHHHHHH
T ss_pred CCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhCC--eEEECcC------------------CHHHHHHHHHHHH
Confidence 99999999999999999999 999999999998854 7777766 9999999999999
Q ss_pred c-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 342 S-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 342 ~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
+ ++++++++.+++++.+ .+||++.+++.+.+.++++.
T Consensus 417 ~~~~~er~~~~~~~~~~v-~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 417 TMSLAERISRHAEMLDVI-VKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp TCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHhhc
Confidence 8 5678889999999986 46999999999999888753
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=9.2e-23 Score=163.28 Aligned_cols=130 Identities=22% Similarity=0.260 Sum_probs=106.2
Q ss_pred EEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC--------CC--CccccccccC
Q 043412 192 VFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD--------LE--KPDDGWAPAA 261 (383)
Q Consensus 192 ~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~--------~~--~~v~~~~~~a 261 (383)
.++++||+.++||++.+++|++++ ++.+++++|.+.. .+..+.+.+.+.... .. +++..+|+.|
T Consensus 14 ~~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 87 (166)
T d2f9fa1 14 FWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK--GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 87 (166)
T ss_dssp CEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT--TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred EEEEEecCccccCHHHHHHHHHHh----cCCeEEEEEeccc--ccchhhhhhhhcccccCcEEEeecccccccccccccc
Confidence 377999999999999999999876 6789999998743 233444444443321 11 4467889999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV 340 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l 340 (383)
|++++||..|++|++++|||++|+|||+++.++..|++.++ +|++++. |+++++++|.++
T Consensus 88 d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-------------------d~~~~~~~i~~l 148 (166)
T d2f9fa1 88 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-------------------DVNEIIDAMKKV 148 (166)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-------------------CHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccceeecCCcceeeecCCcccccCCC-------------------CHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999885 7776543 899999999999
Q ss_pred hcCHHH
Q 043412 341 VSNVDE 346 (383)
Q Consensus 341 l~~~~~ 346 (383)
++|++.
T Consensus 149 ~~~~~~ 154 (166)
T d2f9fa1 149 SKNPDK 154 (166)
T ss_dssp HHCTTT
T ss_pred HhCHHH
Confidence 999764
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.94 E-value=5.1e-10 Score=99.78 Aligned_cols=274 Identities=12% Similarity=0.056 Sum_probs=167.5
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCCccc-ccCCCCCCCCCCCcccccce-eeee-cCCCCHHHHHhc--CCCCEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYPPLF-DTLPCPPTPGYGDFMAVIGR-TMFE-TDRVSPEHVKRC--NRMDFV 128 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~--~~ad~v 128 (383)
......+.+++.+.+||+|+++......++..+ +.....++ .+..+- .... ...++....+.+ +-+|.-
T Consensus 74 ~~~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi------~HiegG~rsg~~~~~~~de~~R~~iskls~~h 147 (373)
T d1v4va_ 74 ARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPV------GHVEAGLRSGNLKEPFPEEANRRLTDVLTDLD 147 (373)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCE------EEETCCCCCSCTTSSTTHHHHHHHHHHHCSEE
T ss_pred HHHHHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhhh------eeecccccccccccCcchhhhhhhhcccccee
Confidence 445567788899999999999976543222111 11111111 122221 1111 123455555542 679999
Q ss_pred EEeChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHH
Q 043412 129 WVPTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDV 207 (383)
Q Consensus 129 i~~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ 207 (383)
++.++..++.+.+.|.++.+|.++.+. +|.-. .... ..... ...+++.+++++.-+....++...
T Consensus 148 f~~t~~~~~~L~~~Ge~~~~I~~vG~p~~D~i~--~~~~-----~~~~~-------~~~~~~~~~lvt~hr~~n~~~~~~ 213 (373)
T d1v4va_ 148 FAPTPLAKANLLKEGKREEGILVTGQTGVDAVL--LAAK-----LGRLP-------EGLPEGPYVTVTMHRRENWPLLSD 213 (373)
T ss_dssp EESSHHHHHHHHTTTCCGGGEEECCCHHHHHHH--HHHH-----HCCCC-------TTCCSSCEEEECCCCGGGGGGHHH
T ss_pred eecchhhhhhhhhhcccccceeecccchhhHHH--hhhh-----hcccc-------cccccccceeEEeccccccchHHH
Confidence 999999999999999999999999874 44211 0000 00000 012456777788777766677888
Q ss_pred HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccCceEEecCCCCCCChHHHH
Q 043412 208 LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAADVFVLPSRGEGWGRPLVE 279 (383)
Q Consensus 208 ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ps~~e~~~~~~~E 279 (383)
+.+++..+.....++.+++.... .........+......-. .+...+++.|++++--| |..+.|
T Consensus 214 ~~~~~~~~~~~~~~~~~i~p~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-----ssgi~E 285 (373)
T d1v4va_ 214 LAQALKRVAEAFPHLTFVYPVHL---NPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-----GGLQEE 285 (373)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCS---CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-----HHHHHH
T ss_pred HHHHHHHHhhhcccceeeeeecc---cccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEeccc-----chhhhc
Confidence 88888888888888888776543 112222222333322110 22235568888888444 567889
Q ss_pred HHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043412 280 AMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDM 358 (383)
Q Consensus 280 a~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 358 (383)
|.++|+|+|.- +.+...+-++.++..++.. |.+++.+++..++++++.++.|...
T Consensus 286 a~~lg~P~Inir~~~eRqeg~~~g~nvlv~~-------------------d~~~I~~~i~~~l~~~~~~~~~~~~----- 341 (373)
T d1v4va_ 286 GAALGVPVVVLRNVTERPEGLKAGILKLAGT-------------------DPEGVYRVVKGLLENPEELSRMRKA----- 341 (373)
T ss_dssp HHHTTCCEEECSSSCSCHHHHHHTSEEECCS-------------------CHHHHHHHHHHHHTCHHHHHHHHHS-----
T ss_pred chhhcCcEEEeCCCccCHHHHhcCeeEEcCC-------------------CHHHHHHHHHHHHcCHHHHhhcccC-----
Confidence 99999999988 4466666555554444433 8999999999999999877765432
Q ss_pred HhcCCHHHHHHHHHHHHHHHH
Q 043412 359 IQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 359 ~~~~s~~~~~~~~~~~~~~~~ 379 (383)
..-|.--+.++++.+.+.+-+
T Consensus 342 ~npYGdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 342 KNPYGDGKAGLMVARGVAWRL 362 (373)
T ss_dssp CCSSCCSCHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHh
Confidence 234554455566666665544
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.67 E-value=9.7e-08 Score=83.89 Aligned_cols=104 Identities=14% Similarity=0.072 Sum_probs=66.7
Q ss_pred CCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc-------ccccc-CCCceeeecccccccccCCC
Q 043412 249 DLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP-------TEYLT-EENGYPLLVGRMSEVTEGPF 320 (383)
Q Consensus 249 ~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~-------~e~v~-~~~g~~~~~~~~~~~~~~~~ 320 (383)
++.+++..+++.||+++.- +.+.++.||+++|+|+|+.+.... ++.+. .+.|..++..
T Consensus 237 ~f~~~~~~lm~~adl~It~----~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~---------- 302 (351)
T d1f0ka_ 237 EFIDDMAAAYAWADVVVCR----SGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQP---------- 302 (351)
T ss_dssp SCCSCHHHHHHHCSEEEEC----CCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGG----------
T ss_pred eehhhHHHHHHhCchhhcc----ccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechh----------
Confidence 3346777889999999843 345899999999999998765321 12222 2444444322
Q ss_pred CcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 321 KGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 321 ~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
.-+.+.+.++|.++ +++.+.+|++++++. ..... ++++.+.+.++.
T Consensus 303 ------~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~-~~~~~----a~~i~~~i~~l~ 348 (351)
T d1f0ka_ 303 ------QLSVDAVANTLAGW--SRETLLTMAERARAA-SIPDA----TERVANEVSRVA 348 (351)
T ss_dssp ------GCCHHHHHHHHHTC--CHHHHHHHHHHHHHT-CCTTH----HHHHHHHHHHHH
T ss_pred ------hCCHHHHHHHHHhh--CHHHHHHHHHHHHcc-CCccH----HHHHHHHHHHHH
Confidence 11688888888775 677788899988763 22223 444555555443
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.54 E-value=1.1e-07 Score=84.55 Aligned_cols=275 Identities=12% Similarity=0.067 Sum_probs=148.2
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCCc-ccccCCCCCCCCCCCcccccceee-e-ecCCCCHHHHHhc--CCCCEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYPP-LFDTLPCPPTPGYGDFMAVIGRTM-F-ETDRVSPEHVKRC--NRMDFV 128 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~--~~ad~v 128 (383)
......+.+++++.+||+|+++......++. ..+.....++ .+..+... . ....++....+.+ +-+|..
T Consensus 74 ~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi------~HiegG~~s~~~~~~~~de~~R~~iskls~~h 147 (377)
T d1o6ca_ 74 SNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAV------GHVEAGLRTGNKYSPFPEELNRQMTGAIADLH 147 (377)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEE------EEESCCCCCSCTTTTTTHHHHHHHHHHHCSEE
T ss_pred HHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccceE------EEEecccccccccccCchhhhccccccceeEE
Confidence 3345667788899999999999765433221 2211111111 22222111 0 0123445555442 679999
Q ss_pred EEeChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccc-cCHH
Q 043412 129 WVPTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYR-KGWD 206 (383)
Q Consensus 129 i~~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~-K~~~ 206 (383)
++.++..++.+.+.|.++.+|.++.+. +|.-......... .. .... ...+.++++..-+.+.. +...
T Consensus 148 f~~t~~~~~~L~~~G~~~~~I~~vG~~~~D~i~~~~~~~~~--~~--~~~~-------~~~~~~ilvt~Hr~~~~~~~~~ 216 (377)
T d1o6ca_ 148 FAPTGQAKDNLLKENKKADSIFVTGNTAIDALNTTVRDGYS--HP--VLDQ-------VGEDKMILLTAHRRENLGEPME 216 (377)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCC--CS--TTTT-------TTTSEEEEECC----------H
T ss_pred eecchhhhhhhhhhccccceEeeccchhHHHHHHHHHHHHh--hh--hhhh-------ccCCceEEEEeccccccccchH
Confidence 999999999999999999999999984 5531111111000 00 0001 12456666666655432 3344
Q ss_pred HHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CCC-------CccccccccCceEEecCCCCCCChHHH
Q 043412 207 VLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DLE-------KPDDGWAPAADVFVLPSRGEGWGRPLV 278 (383)
Q Consensus 207 ~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~~-------~~v~~~~~~adi~v~ps~~e~~~~~~~ 278 (383)
..+.++..+....+++.+++.... .......+....... ++. .+...++..|++++-=| |..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-----ss~i~ 288 (377)
T d1o6ca_ 217 NMFKAIRRIVGEFEDVQVVYPVHL---NPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-----GGVQE 288 (377)
T ss_dssp HHHHHHHHHHHHCTTEEEEEC-------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC-------CHHH
T ss_pred HHHHHHHhhccccccccccccccc---ccccchhhhhccccccceEeccccchHHHHHHHhhhheeeccc-----chhHH
Confidence 555666566666677777665432 111112222111111 110 23346679999988433 44588
Q ss_pred HHHHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 279 EAMSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 279 Ea~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
||..+|+|+|.-.. +...+.+..++..+++. |.+++.+++.+++.++..++.+.+
T Consensus 289 Ea~~lg~P~Inir~~tERqe~~~~g~nilv~~-------------------~~~~I~~~i~~~l~~~~~~~~~~~----- 344 (377)
T d1o6ca_ 289 EAPSLGKPVLVLRDTTERPEGVEAGTLKLAGT-------------------DEENIYQLAKQLLTDPDEYKKMSQ----- 344 (377)
T ss_dssp HGGGGTCCEEEECSCCC---CTTTTSSEEECS-------------------CHHHHHHHHHHHHHCHHHHHHHHH-----
T ss_pred hhhhhhceEEEeCCCCcCcchhhcCeeEECCC-------------------CHHHHHHHHHHHHhChHHHhhhcc-----
Confidence 99999999998755 44555555555555554 899999999999999887665422
Q ss_pred HHhcCCHHHHHHHHHHHHHH
Q 043412 358 MIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~~~ 377 (383)
...-|.-...++++.+.+.+
T Consensus 345 ~~npYGdG~as~rI~~~L~~ 364 (377)
T d1o6ca_ 345 ASNPYGDGEASRRIVEELLF 364 (377)
T ss_dssp CCCTTCCSCHHHHHHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHH
Confidence 12335444455555555543
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=1.6e-07 Score=83.27 Aligned_cols=281 Identities=11% Similarity=0.124 Sum_probs=157.9
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceee-ee-cCCCCHHHHHhc--CCCCEEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTM-FE-TDRVSPEHVKRC--NRMDFVW 129 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~~ad~vi 129 (383)
......+.+.+.+.+||+|+++......++........... ..+..+-.. .. ..+++....+.+ +-+|.-+
T Consensus 72 ~~~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ip-----i~HiegG~~s~~~~~~~pde~~R~~iskls~~hf 146 (376)
T d1f6da_ 72 CRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP-----VGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHF 146 (376)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC-----EEEESCCCCCSCTTSSTTHHHHHHHHHHTCSEEE
T ss_pred HHHHHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCce-----EEEEecccccccccccCchhhhhhhhccceeEEE
Confidence 33455677788889999999997654332222211111111 122222111 11 123445554442 7799999
Q ss_pred EeChHHHHHHHhcCCCCCCeEEecC-CCcCCCCC-C--CCCCCCccc-cCCccccccCCCCCCCCcEEEEEeeccc-ccc
Q 043412 130 VPTDFHVSTFIRSGVDPAKVVKIVQ-PVHVGFFD-P--VNCDPIDLA-SIGKPVLGLSNMNTSSKEFVFLSVFKWE-YRK 203 (383)
Q Consensus 130 ~~s~~~~~~~~~~~~~~~~i~vi~n-gid~~~~~-~--~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~i~~~g~~~-~~K 203 (383)
+.++..++.+.+.|..+++|.++.+ ++|.-... + ......... ....... ...+.+++++.=+.+ ..+
T Consensus 147 ~~~~~~~~~L~~~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ilvt~H~~~~~~~ 220 (376)
T d1f6da_ 147 SPTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFI------DPDKKMILVTGHRRESFGR 220 (376)
T ss_dssp ESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTC------CTTSEEEEECCCCBSSCCH
T ss_pred eccHHHHhHHHhcCCCccccceecCchHHHHHHHHhhhhccchhhhhhhcccccc------CCCCceEEEecccchhhhh
Confidence 9999999999999999999999998 44421000 0 000000000 0000000 123455555554443 345
Q ss_pred CHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC-CC-------CccccccccCceEEecCCCCCCCh
Q 043412 204 GWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD-LE-------KPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 204 ~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~-~~-------~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
....++.++..+.....++.+++.... .........+...... +. .+...+++.|++++-=| |.
T Consensus 221 ~~~~i~~~l~~~~~~~~~~~ii~p~~~---~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vignS-----ss 292 (376)
T d1f6da_ 221 GFEEICHALADIATTHQDIQIVYPVHL---NPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS-----GG 292 (376)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEECCB---CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS-----SG
T ss_pred hHHHHHHHHhhhhhhcceeEEeccccc---chhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEecC-----cc
Confidence 567788888888777778777766532 1122222333322221 10 22335668899888544 45
Q ss_pred HHHHHHHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
.+.||-++|+|+|.-.. ..-.+-+..++..++++ |.+++.+++.+++.++...+.+..
T Consensus 293 gi~Ea~~lg~P~Inir~~ter~~~~~~g~~i~v~~-------------------~~~~I~~ai~~~l~~~~~~~~~~~-- 351 (376)
T d1f6da_ 293 IQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGT-------------------DKQRIVEEVTRLLKDENEYQAMSR-- 351 (376)
T ss_dssp GGGTGGGGTCCEEECSSCCSCHHHHHHTSEEECCS-------------------SHHHHHHHHHHHHHCHHHHHHHHH--
T ss_pred hHhhHHHhCCCEEEcCCCccCccceecCeeEECCC-------------------CHHHHHHHHHHHHhChHhhhhhcc--
Confidence 67799999999986633 33445554454444443 899999999999988865443322
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
....|.-.+.++++.+++++
T Consensus 352 ---~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 352 ---AHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp ---SCCTTCCSCHHHHHHHHHHH
T ss_pred ---CCCCCCCChHHHHHHHHHHh
Confidence 12335545667777776654
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=0.00031 Score=66.51 Aligned_cols=252 Identities=12% Similarity=0.023 Sum_probs=152.2
Q ss_pred cCCCCEEEEeChHHHHHHHh-c-----CCCCCCeEEecCCCcCCCCCCCCC----------------CCCc-cccCCcc-
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-S-----GVDPAKVVKIVQPVHVGFFDPVNC----------------DPID-LASIGKP- 177 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~-----~~~~~~i~vi~ngid~~~~~~~~~----------------~~~~-~~~~~~~- 177 (383)
+..+..+..+|.-..+..++ . .+-+.++.-|.|||+......... .... .....+.
T Consensus 411 l~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~ 490 (796)
T d1l5wa_ 411 VVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFA 490 (796)
T ss_dssp HHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGG
T ss_pred HHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhcc
Confidence 35678899999988886655 2 223568999999998755432110 0000 0000000
Q ss_pred ------------------cc-----ccCCCCCCCCcEEEEEeeccccccCHHHHHHH----HHHHhcc----CCCeEEEE
Q 043412 178 ------------------VL-----GLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKA----YLEEFSK----ADGVVLYL 226 (383)
Q Consensus 178 ------------------~l-----~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a----~~~l~~~----~~~~~l~i 226 (383)
.+ ...+..++++.+.++++-|+..+|...+++.- ...|+.. ..++++++
T Consensus 491 ~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~If 570 (796)
T d1l5wa_ 491 DDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLF 570 (796)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEE
Confidence 00 00124567999999999999999998884433 2334332 12589999
Q ss_pred EeCCCCCCCchHHHHH---HHHhhCC----CC--------Cc-----cccccccCceEEecCC--CCCCChHHHHHHHcC
Q 043412 227 LTNPYHSGRDFGNKIV---NFVEDSD----LE--------KP-----DDGWAPAADVFVLPSR--GEGWGRPLVEAMSMG 284 (383)
Q Consensus 227 ~G~~~~~~~~~~~~~~---~~~~~~~----~~--------~~-----v~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G 284 (383)
.|...+.+..-.+.++ ++.+..+ +. ++ -..+...||+-+..++ .|+.|.+-|-|+..|
T Consensus 571 aGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG 650 (796)
T d1l5wa_ 571 GAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 650 (796)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTT
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcC
Confidence 9987654433223222 2222111 11 11 1356699999999886 699999999999999
Q ss_pred CCEEEcCCCCcccccc---CCCceeeeccc--ccccccCCC----------------------------Ccc-------c
Q 043412 285 LPVIATNWSGPTEYLT---EENGYPLLVGR--MSEVTEGPF----------------------------KGH-------F 324 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v~---~~~g~~~~~~~--~~~~~~~~~----------------------------~g~-------~ 324 (383)
.+.+++-.|...|..+ .+|||++.... +.....++. .+. +
T Consensus 651 ~lnlstlDGw~vE~~~~vg~eN~f~fG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~l 730 (796)
T d1l5wa_ 651 ALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSI 730 (796)
T ss_dssp CEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHT
T ss_pred CeeeecccchHHHHHHhcCccceEEecCchHHHHHHHhcCCChHHHhhcCHHHHHHHHHhhcCCCCCCChHHHHHHHHHH
Confidence 9999999999888876 56999885321 000000000 000 0
Q ss_pred cc----C----CCHHHH---HHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 325 WA----E----PSVDKL---RALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 325 ~~----~----~~~~~l---a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
.. . .|-+++ -+.+.....|++.+.+|...+... .-.||-++++++|.+-
T Consensus 731 ~~~~~D~y~~~~df~~y~~~q~~v~~~Y~d~~~W~~~~~~nia~-~g~FssdR~i~eYa~~ 790 (796)
T d1l5wa_ 731 GKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTAR-CGMFSSDRSIRDYQAR 790 (796)
T ss_dssp STTTCCTTCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH-CGGGBHHHHHHHHHHH
T ss_pred hhcCCChhhhhccHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhC-CCCcChHHHHHHHHHH
Confidence 00 0 011222 234455567898888887776654 3579999999999764
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.78 E-value=0.00029 Score=66.77 Aligned_cols=252 Identities=13% Similarity=0.075 Sum_probs=154.8
Q ss_pred cCCCCEEEEeChHHHHHHHhc------CCCCCCeEEecCCCcCCCCCCCCCCCC--------------c---cc----cC
Q 043412 122 CNRMDFVWVPTDFHVSTFIRS------GVDPAKVVKIVQPVHVGFFDPVNCDPI--------------D---LA----SI 174 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~~------~~~~~~i~vi~ngid~~~~~~~~~~~~--------------~---~~----~~ 174 (383)
+..+..+-.+|.-..+.+++. ...+.++.-+.|||+....-....... . .. ..
T Consensus 435 l~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~ 514 (824)
T d2gj4a1 435 IAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYV 514 (824)
T ss_dssp HHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGT
T ss_pred HHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhC
Confidence 466777888998888777652 234568999999999876532110000 0 00 00
Q ss_pred ---------------Cccccc-----cCCCCCCCCcEEEEEeeccccccCHHH----HHHHHHHHhcc----CCCeEEEE
Q 043412 175 ---------------GKPVLG-----LSNMNTSSKEFVFLSVFKWEYRKGWDV----LLKAYLEEFSK----ADGVVLYL 226 (383)
Q Consensus 175 ---------------~~~~l~-----~~~~~~~~~~~~i~~~g~~~~~K~~~~----ll~a~~~l~~~----~~~~~l~i 226 (383)
.+..+. ..+..++++.+.++++-|+.++|...+ ++..+.++++. ..++++++
T Consensus 515 ~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IF 594 (824)
T d2gj4a1 515 DDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMI 594 (824)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEE
Confidence 000000 012557899999999999999999887 33334555443 23688999
Q ss_pred EeCCCCCCCchHHHHHHHHhhC----CCC----Cc--c-----------ccccccCceEEecCC--CCCCChHHHHHHHc
Q 043412 227 LTNPYHSGRDFGNKIVNFVEDS----DLE----KP--D-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSM 283 (383)
Q Consensus 227 ~G~~~~~~~~~~~~~~~~~~~~----~~~----~~--v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~ 283 (383)
.|...+.+..- +.+.+++... +.. +. + ..++..||+.+..|+ .|..|++-+-+|..
T Consensus 595 aGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN 673 (824)
T d2gj4a1 595 GGKAAPGYHMA-KMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN 673 (824)
T ss_dssp ECCCCTTCHHH-HHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred eCCCCCccHHH-HHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc
Confidence 99875543322 3333332221 111 11 1 356699999999886 69999999999999
Q ss_pred CCCEEEcCCCCcccccc---CCCceeeeccc--ccccccCCCCcc-------------------cccC------------
Q 043412 284 GLPVIATNWSGPTEYLT---EENGYPLLVGR--MSEVTEGPFKGH-------------------FWAE------------ 327 (383)
Q Consensus 284 G~PvI~~~~~g~~e~v~---~~~g~~~~~~~--~~~~~~~~~~g~-------------------~~~~------------ 327 (383)
|.+.+++-.|...|..+ ++||+.+.... +.+...++.... .+.+
T Consensus 674 Gal~lstlDGwnvEi~~~vg~~N~~~fG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~~~~~~~~~~~f~~l~~~ 753 (824)
T d2gj4a1 674 GALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNM 753 (824)
T ss_dssp TCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHH
T ss_pred CCeeeccccchHHHHHHhcCcccEEEeCCChhhhhHHhhcCCCHHHHHhhCHHHHHHHHHhccccCCCCCchhHHHHHHH
Confidence 99999999999888776 45898885321 000000000000 0000
Q ss_pred ----------CCHHHHH---HHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 328 ----------PSVDKLR---ALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 328 ----------~~~~~la---~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
.|-+++. +.+.....||+.+.+|...+... .-.||-++++++|.+-+
T Consensus 754 l~~~D~y~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~~~~nia~-~g~FssdR~i~eY~~~i 813 (824)
T d2gj4a1 754 LMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIAT-SGKFSSDRTIAQYAREI 813 (824)
T ss_dssp HHHCCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT-CGGGBHHHHHHHHHHHT
T ss_pred HhcCChhhhhccHHHHHHHHHHHHHhhcCHHHHHHHHHHHHhc-CCCcChHHHHHHHHHHc
Confidence 0112222 23445566798888888887765 46899999999997654
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=97.67 E-value=7.9e-05 Score=65.52 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=50.5
Q ss_pred ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc--------cccccC-CCceeeecccccccccCCCCcccc
Q 043412 255 DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP--------TEYLTE-ENGYPLLVGRMSEVTEGPFKGHFW 325 (383)
Q Consensus 255 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~--------~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~ 325 (383)
..++..+|++|..+ ...++.|||++|+|+|+.+..+- .+.+.+ +.|..++..
T Consensus 281 ~~ll~~a~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~--------------- 341 (391)
T d1pn3a_ 281 QELFGRVAAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGP--------------- 341 (391)
T ss_dssp HHHHTTSSCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCS---------------
T ss_pred HHHHhhccEEEecC----chHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcC---------------
Confidence 46778999999654 34689999999999999887542 223333 566655543
Q ss_pred cCCCHHHHHHHHHHHhcC
Q 043412 326 AEPSVDKLRALMRLVVSN 343 (383)
Q Consensus 326 ~~~~~~~la~~i~~ll~~ 343 (383)
..++++++++|++++++
T Consensus 342 -~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 342 -VPTIDSLSAALDTALAP 358 (391)
T ss_dssp -SCCHHHHHHHHHHHTST
T ss_pred -CCCHHHHHHHHHHHhCH
Confidence 12799999999999964
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=97.67 E-value=8.3e-05 Score=65.48 Aligned_cols=69 Identities=16% Similarity=0.067 Sum_probs=50.2
Q ss_pred ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCC
Q 043412 255 DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 255 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
..++..+|++| ..|...++.||+++|+|+|+.+..+ ....+.+ +.|..++.. ..+
T Consensus 296 ~~~l~~~~~~V----~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~----------------~~~ 355 (401)
T d1iira_ 296 QVLFGRVAAVI----HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGP----------------IPT 355 (401)
T ss_dssp HHHGGGSSEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSS----------------SCC
T ss_pred HHHHhhcCEEE----ecCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcC----------------CCC
Confidence 56778899999 4567789999999999999987643 2222333 455544432 127
Q ss_pred HHHHHHHHHHHhcC
Q 043412 330 VDKLRALMRLVVSN 343 (383)
Q Consensus 330 ~~~la~~i~~ll~~ 343 (383)
+++++++|.+++++
T Consensus 356 ~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 356 FDSLSAALATALTP 369 (401)
T ss_dssp HHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHhCH
Confidence 99999999999953
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=97.64 E-value=2.5e-05 Score=69.08 Aligned_cols=99 Identities=12% Similarity=0.094 Sum_probs=64.1
Q ss_pred ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCC
Q 043412 255 DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 255 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
..++..+|++| ..|...++.||+++|+|+|+.+..+ ..+.+.+ +.|..++..+ .+
T Consensus 297 ~~ll~~~~~~I----~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~----------------~~ 356 (401)
T d1rrva_ 297 QALFRRVAAVI----HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPT----------------PT 356 (401)
T ss_dssp HHHGGGSSEEE----ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSC----------------CC
T ss_pred HHHhhhccEEE----ecCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCC----------------CC
Confidence 46678899999 4566789999999999999988754 2233333 5555554321 27
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 330 VDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 330 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+++++++|+++++ ++.++ ++++ +.+...- .-+.+-.+++++.+.
T Consensus 357 ~~~L~~ai~~vl~-~~~r~----~a~~-~~~~~~~-~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 357 FESLSAALTTVLA-PETRA----RAEA-VAGMVLT-DGAAAAADLVLAAVG 400 (401)
T ss_dssp HHHHHHHHHHHTS-HHHHH----HHHH-HTTTCCC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-HHHHH----HHHH-HHHHHhh-cCHHHHHHHHHHHhC
Confidence 9999999999994 54333 3333 2333332 234556666666553
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.15 E-value=0.0013 Score=59.00 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=50.5
Q ss_pred ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-cC-CCceeeecccccccccCCCCcccccCCCHHH
Q 043412 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYL-TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 259 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v-~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
..+++|| ..|...++.||+.+|+|+|+....+ ...-+ +. +.|..++. ..+.++
T Consensus 363 p~~~~fI----tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~-----------------~~t~~~ 421 (473)
T d2pq6a1 363 PSIGGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT-----------------NVKREE 421 (473)
T ss_dssp TTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCS-----------------SCCHHH
T ss_pred CcCcEEE----ecCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCC-----------------CcCHHH
Confidence 4666676 4566779999999999999998732 12222 22 33333321 128999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 043412 333 LRALMRLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~a~~ 356 (383)
++++|+++++|+.. +++.++|++
T Consensus 422 l~~ai~~vl~d~~~-~~~r~~a~~ 444 (473)
T d2pq6a1 422 LAKLINEVIAGDKG-KKMKQKAME 444 (473)
T ss_dssp HHHHHHHHHTSHHH-HHHHHHHHH
T ss_pred HHHHHHHHHcCChH-HHHHHHHHH
Confidence 99999999999862 334455544
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=96.81 E-value=0.0019 Score=57.52 Aligned_cols=68 Identities=21% Similarity=0.218 Sum_probs=47.6
Q ss_pred ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccc-cC-CCceeeecccccccccCCCCcccccCCCHHH
Q 043412 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYL-TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 259 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v-~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
..++++| ..|...++.||+.+|+|+|+....+- ..-+ +. +.|..++.+ ..+.++
T Consensus 336 p~~~~fI----tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~----------------~~t~~~ 395 (450)
T d2c1xa1 336 EAVGAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGG----------------VFTKSG 395 (450)
T ss_dssp TTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGG----------------SCCHHH
T ss_pred CceeEEE----ccCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCC----------------CcCHHH
Confidence 5566676 45667799999999999999987432 1122 33 444444322 228999
Q ss_pred HHHHHHHHhcCHHH
Q 043412 333 LRALMRLVVSNVDE 346 (383)
Q Consensus 333 la~~i~~ll~~~~~ 346 (383)
+.++|.++++|+..
T Consensus 396 l~~ai~~vL~d~~y 409 (450)
T d2c1xa1 396 LMSCFDQILSQEKG 409 (450)
T ss_dssp HHHHHHHHHHSHHH
T ss_pred HHHHHHHHhcCcHH
Confidence 99999999999863
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=94.98 E-value=0.033 Score=49.04 Aligned_cols=76 Identities=14% Similarity=0.116 Sum_probs=48.2
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----cccc-ccC-CCceeeecccccccccCCCCcccccCCCHH
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEY-LTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVD 331 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~-v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 331 (383)
...+++|| ..|...++.||+++|+|+|+....+ ...- ++. +.|+.++.+.. ..+.. .+.+
T Consensus 346 ~p~~~~fI----tHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~-------~~~~~---~t~~ 411 (461)
T d2acva1 346 HKAIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-------KGSDV---VAAE 411 (461)
T ss_dssp STTEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-------TTCCC---CCHH
T ss_pred cccCCEEE----ecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeecccc-------ccCCc---cCHH
Confidence 36778888 5566779999999999999987632 2222 233 44544432100 00000 2799
Q ss_pred HHHHHHHHHhcC-HHHH
Q 043412 332 KLRALMRLVVSN-VDEA 347 (383)
Q Consensus 332 ~la~~i~~ll~~-~~~~ 347 (383)
++++++++++++ +..+
T Consensus 412 ~l~~a~~~vl~~d~~~r 428 (461)
T d2acva1 412 EIEKGLKDLMDKDSIVH 428 (461)
T ss_dssp HHHHHHHHHTCTTCTHH
T ss_pred HHHHHHHHHhhCCHHHH
Confidence 999999999975 4343
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.06 E-value=0.046 Score=48.25 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=45.2
Q ss_pred ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-cC-CCceeeecccccccccCCCCcccccCCCHHH
Q 043412 259 PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYL-TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 259 ~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v-~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
..+++|| ..|...++.||+.+|+|+|+.+..+ ....+ +. +.|.-+...+ ....+.++
T Consensus 351 p~~~~fV----tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~-------------~~~~t~~~ 413 (471)
T d2vcha1 351 PSTGGFL----THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD-------------DGLVRREE 413 (471)
T ss_dssp TTEEEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT-------------TSCCCHHH
T ss_pred ccCCEEE----ecCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCC-------------CCcCCHHH
Confidence 3556666 4566779999999999999998732 12222 22 3343222110 01128899
Q ss_pred HHHHHHHHhcCHH
Q 043412 333 LRALMRLVVSNVD 345 (383)
Q Consensus 333 la~~i~~ll~~~~ 345 (383)
++++|+++++|++
T Consensus 414 l~~ai~~vl~~~~ 426 (471)
T d2vcha1 414 VARVVKGLMEGEE 426 (471)
T ss_dssp HHHHHHHHHTSTH
T ss_pred HHHHHHHHhCCcH
Confidence 9999999999875
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=91.28 E-value=0.96 Score=37.64 Aligned_cols=98 Identities=9% Similarity=0.025 Sum_probs=59.1
Q ss_pred cEEEEEee-ccccccC--HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC---------CCC-----C
Q 043412 190 EFVFLSVF-KWEYRKG--WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS---------DLE-----K 252 (383)
Q Consensus 190 ~~~i~~~g-~~~~~K~--~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~---------~~~-----~ 252 (383)
..+++..| +..+.|. .+...+.++.+.++ +.+++++|++ ...+..+...... .+. .
T Consensus 181 ~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~-----~e~~~~~~~~~~~~~~~~~~~~~l~g~~sl~ 253 (348)
T d1pswa_ 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSA-----KDHEAGNEILAALNTEQQAWCRNLAGETQLD 253 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCG-----GGHHHHHHHHTTSCHHHHTTEEECTTTSCHH
T ss_pred CeEEeccccchhhccccchHHHhhhHHHHhhc--CCcccccccc-----chHHHHHHHHHhhhcccccccccccCCccHH
Confidence 44445554 3344454 45577777777665 5678888865 2222222222211 111 2
Q ss_pred ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccc
Q 043412 253 PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYL 299 (383)
Q Consensus 253 ~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v 299 (383)
++..+++.||++|.+.. ..+--|.++|+|+|+--.+..++..
T Consensus 254 el~~li~~a~l~I~~Dt-----g~~HlAaa~g~p~i~lfg~~~~~~~ 295 (348)
T d1pswa_ 254 QAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALYGPSSPDFT 295 (348)
T ss_dssp HHHHHHHTSSEEEEESS-----HHHHHHHHTTCCEEEEESSSCTTSS
T ss_pred HHHHHHhcceeEeecCc-----cHHHHHHHcCCCEEEEECCCCHhhh
Confidence 34577899999998873 4678899999999998644444443
|