Citrus Sinensis ID: 043430

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------26
Protein Sequence
MALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEHHcccccccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHcc
Secondary Structure Prediction (SSPRO)
cccEccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccHHHccccccccccccHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccccccccEccccEcccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
malvgstsitptkssfvqpqsqpfitkprsnihpisavhaadsakppsavktttkapepvlktsnvgpqkwtvdswkskkalqlpeypnkeELESVLKtlddfppivfaGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLmfggqmpvVKVGrmagqfakprsdpfeekngvklpsyrgdnvngdafdeksrnpdpqRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Flexible Loop (DISEMBL)
malvgstsitptkssfvqpqsqpfiTKPRSNIHPISAvhaadsakppsavktttkapepvlktsnvgpqkwtvdsWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQfakprsdpfeekngvklpsyrgdnvngdafdeksrnpdpQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Low Complexity Region (SEG)
MALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGearsleerlaeaaMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Disordered region (IsUnstruct)
**********************************************************************************************SVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMA*******************************************LIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDF***
Disordered Region (DISOPRED)
***************************************************************************WKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAK**********GVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFT**
Disordered Region (DISEMBL)
*********TPTKSSFVQPQSQPFITKPRSNIHPISAV*****************APEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Disordered Region (DISPRO)
*********************************PI*************************************VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	258	2.2.26 [Sep-21-2011]
P27608	542	Phospho-2-dehydro-3-deoxy	N/A	no	0.961	0.457	0.742	1e-109
P37216	541	Phospho-2-dehydro-3-deoxy	N/A	no	1.0	0.476	0.706	1e-109
P21357	538	Phospho-2-dehydro-3-deoxy	N/A	no	0.949	0.455	0.755	1e-108
Q75W16	539	Phospho-2-dehydro-3-deoxy	yes	no	0.868	0.415	0.786	1e-102
P37215	511	Phospho-2-dehydro-3-deoxy	N/A	no	0.860	0.434	0.75	1e-100
Q75LR2	554	Phospho-2-dehydro-3-deoxy	no	no	0.984	0.458	0.643	1e-100
P37822	511	Phospho-2-dehydro-3-deoxy	N/A	no	0.860	0.434	0.745	1e-99
P29976	525	Phospho-2-dehydro-3-deoxy	yes	no	0.868	0.426	0.741	1e-98
Q00218	507	Phospho-2-dehydro-3-deoxy	no	no	0.856	0.435	0.710	2e-97
P80574	450	Phospho-2-dehydro-3-deoxy	yes	no	0.713	0.408	0.548	4e-57

>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1

 Score =  394 bits (1012), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/264 (74%), Positives = 213/264 (80%), Gaps = 16/264 (6%)

Query: 11  PTKSSFVQPQS---QPF--------ITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEP 59
           P KS  VQ QS    P          TKP   + PISA+H++DS+K P      +  P P
Sbjct: 14  PNKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSP 73

Query: 60  -----VLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARS 114
                    + V   +WTV+SWKSKKALQLPEYPN+EEL+SVLKT+++FPPIVFAGEARS
Sbjct: 74  PAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARS 133

Query: 115 LEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGR 174
           LEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGR
Sbjct: 134 LEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGR 193

Query: 175 MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLL 234
           MAGQFAKPRSD FEEKNGVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLL
Sbjct: 194 MAGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLL 253

Query: 235 RAFATGGYAAMQRVTQWNLDFTEH 258
           RAFATGGYAAMQR+ QWNLDFTEH
Sbjct: 254 RAFATGGYAAMQRINQWNLDFTEH 277

Nicotiana tabacum (taxid: 4097)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 5EC: 4

>sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1

 Score =  392 bits (1008), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/276 (70%), Positives = 216/276 (78%), Gaps = 18/276 (6%)

Query: 1   MALVGSTSITPTKSSFVQPQSQPFITKPRSN-------------IHPISAVHAADSAKPP 47
           MAL  +T+     S+    Q+QP ++ P  N             + PI+AVH++DS K P
Sbjct: 1   MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKNP 60

Query: 48  SAVKTTTKAPEPVLKTSN-----VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDD 102
                 TK+  P    +      V   +W VDSWKSKKALQLPEYP++EEL SVLKT+D+
Sbjct: 61  IVSDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRSVLKTIDE 120

Query: 103 FPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM 162
           FPPIVFAGEARSLEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLM
Sbjct: 121 FPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLM 180

Query: 163 FGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIR 222
           FGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIR
Sbjct: 181 FGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIR 240

Query: 223 AYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           AYCQSAATLNLLRAFATGGYAAMQR+ QWNLDFTEH
Sbjct: 241 AYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEH 276

Involved in maintaining the supply of chorismate for the biosynthesis of the aromatic amino acids and other chorismate-derived metabolites.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2

 Score =  389 bits (1000), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/254 (75%), Positives = 209/254 (82%), Gaps = 9/254 (3%)

Query: 10  TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSN---- 65
           +P K++F    S    TK    + PISAVH++DS K P      +K+  P    +     
Sbjct: 27  SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAP 82

Query: 66  -VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAM 124
            V   +W VDSWKSKKALQLPEYPN+EEL SVLKT+D+FPPIVFAGEARSLEERL EAAM
Sbjct: 83  AVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAM 142

Query: 125 GKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRS 184
           G+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRS
Sbjct: 143 GRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRS 202

Query: 185 DPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAA 244
           D FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRAFATGGYAA
Sbjct: 203 DSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAA 262

Query: 245 MQRVTQWNLDFTEH 258
           MQR+ QWNLDFTEH
Sbjct: 263 MQRINQWNLDFTEH 276

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/229 (78%), Positives = 198/229 (86%), Gaps = 5/229 (2%)

Query: 35  ISAVHAADSAKPPSAVKTTTKAPEPVL----KTSNVGPQKWTVDSWKSKKALQLPEYPNK 90
           +SAVHAAD AK    V+   KA  P      +   VG  KWTVDSWK+KKALQLPEYP++
Sbjct: 38  VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQ 97

Query: 91  EELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDT 150
           EEL+SVLKT++ FPP+VFAGEAR LEERLA+AAMG+AF+LQGGDCAESFKEFNANNIRDT
Sbjct: 98  EELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDT 157

Query: 151 FRILLQMGVVLMFGGQMPVVK-VGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFD 209
           FRILLQMG VLMFGGQMPVVK VGRMAGQFAKPRSD FEE++GVKLPSYRGDN+NGD FD
Sbjct: 158 FRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFD 217

Query: 210 EKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           EKSR PDPQR+IRAY QS ATLNLLRAFATGGYAAMQRVTQWNLDF +H
Sbjct: 218 EKSRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDH 266

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1

 Score =  364 bits (934), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/240 (75%), Positives = 199/240 (82%), Gaps = 18/240 (7%)

Query: 18  QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWK 77
           QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSWK
Sbjct: 27  QPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWK 68

Query: 78  SKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
           +KKALQLPEYP+++ELESVLKTL+  PP+VFAGEARSLEE+L EAA+GKAFLLQGGDCAE
Sbjct: 69  TKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAE 128

Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
           SFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEE NGVKLPS
Sbjct: 129 SFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPS 188

Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
           Y+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRAFATGGYAAMQRVT+WNLDF E
Sbjct: 189 YKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVE 248

May be involved in the synthesis of secondary metabolites derived from intermediates of the pre-chorismate pathway up to shikimate.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2

 Score =  364 bits (934), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/278 (64%), Positives = 208/278 (74%), Gaps = 24/278 (8%)

Query: 2   ALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAK-PPSAVKTTTKAPEPV 60
           ++ G  ++ P   S     +  F+T  R     + AVHAA+ +K PP  V +  K   P 
Sbjct: 8   SMAGGAAVVP--RSATATTASAFVTMKRRAT-AVRAVHAAEPSKNPPVGVPSAAKTSSPS 64

Query: 61  LK--------------------TSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTL 100
           +                     T  V P +W VDSW++KKALQLPEYPN  ELE+VLKT+
Sbjct: 65  VAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTI 124

Query: 101 DDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 160
           + FPPIVFAGEAR LEERLA+AAMG+AFLLQGGDCAESFKEFN NNIRDTFR+LLQM  V
Sbjct: 125 EAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAV 184

Query: 161 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRL 220
           L FGGQMPV+KVGRMAGQFAKPRS+ FEE++GVKLPSYRGDN+NGDAF+EKSR PDPQR+
Sbjct: 185 LTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRM 244

Query: 221 IRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           +RAY QSAATLNLLRAFATGGYAAMQRVTQWNLDFT+H
Sbjct: 245 VRAYAQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQH 282

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1

 Score =  362 bits (929), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 179/240 (74%), Positives = 198/240 (82%), Gaps = 18/240 (7%)

Query: 18  QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWK 77
           QP+   F T      HPISAVHAA+ +K  +AVK                  KW++DSWK
Sbjct: 27  QPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWK 68

Query: 78  SKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
           +KKALQLPEYP+++ELESVLKTL+  PP+VFAGEARSLEE+L EAA+GKAFLLQGGDCAE
Sbjct: 69  TKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAE 128

Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
           SFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDP EE NGVKLPS
Sbjct: 129 SFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPS 188

Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
           Y+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRAFATGGYAAMQRVT+WNLDF E
Sbjct: 189 YKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVE 248

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2

 Score =  359 bits (921), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 172/232 (74%), Positives = 200/232 (86%), Gaps = 8/232 (3%)

Query: 26  TKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLP 85
           TKP+S ++ ++AVHAA+ A+   +VK +       + +S+ G  KWT +SWK KKALQLP
Sbjct: 38  TKPKS-VNLVTAVHAAEPARNAVSVKES-------VASSSSGALKWTPESWKLKKALQLP 89

Query: 86  EYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNAN 145
           +YPN  ELESVLKT++ FPPIVFAGEAR+LEERLA+AA+GKAFLLQGGDCAESFKEFNA 
Sbjct: 90  DYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGGDCAESFKEFNAT 149

Query: 146 NIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNG 205
           NIRDTFR+LLQM +VL FGGQ+PV+KVGRMAGQFAKPRSD FEEK+GVKLPSY+GDN+NG
Sbjct: 150 NIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGVKLPSYKGDNING 209

Query: 206 DAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
           D FDEKSR PDP R+IRAY QSAATLNLLRAFATGGYAA+QRVTQWNLDF E
Sbjct: 210 DTFDEKSRIPDPNRMIRAYTQSAATLNLLRAFATGGYAAIQRVTQWNLDFVE 261

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2

 Score =  355 bits (911), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 169/238 (71%), Positives = 198/238 (83%), Gaps = 17/238 (7%)

Query: 23  PFITKPRSNIH--PISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKK 80
           P+   PR  I   P+ AVH+ D  K      +T  A   V         KW+++SWKSKK
Sbjct: 17  PYRHAPRRPISFSPVFAVHSTDPKK------STQSASASV---------KWSLESWKSKK 61

Query: 81  ALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFK 140
           ALQLP+YP++++++SVL+TL  FPPIVFAGEAR LE++L +AAMG+AF+LQGGDCAESFK
Sbjct: 62  ALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFK 121

Query: 141 EFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRG 200
           EFNANNIRDTFR+LLQMGVVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEEK+GVKLPSYRG
Sbjct: 122 EFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRG 181

Query: 201 DNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           DN+NGDAFDEKSR PDP R++RAY QS ATLNLLRAFATGGYAAMQRV+QWNLDFT+H
Sbjct: 182 DNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATGGYAAMQRVSQWNLDFTQH 239

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

>sp|P80574|AROF_STRCO Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=aroH PE=1 SV=3

 Score =  221 bits (563), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 101/184 (54%), Positives = 135/184 (73%)

Query: 74  DSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGG 133
           ++W+   A Q PEYP+ E L +V+  L+ +PP+VFAGE   L  R+A  A G+AFLLQGG
Sbjct: 13  NTWRDLPAAQQPEYPDTEALRAVIADLESYPPLVFAGECDQLRARMAAVAKGEAFLLQGG 72

Query: 134 DCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGV 193
           DCAE+F   +A++IR+  + LLQMG VL +   +PVVKVGR+AGQ++KPRS P E ++GV
Sbjct: 73  DCAEAFDAVSADHIRNKLKTLLQMGAVLTYAASVPVVKVGRIAGQYSKPRSKPTETRDGV 132

Query: 194 KLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNL 253
            LP+YRGD+VNG  F E +R PDP+RL R Y  SA+TLNL+RAF TGGYA +++V  WN 
Sbjct: 133 TLPTYRGDSVNGFDFTEAARIPDPERLKRMYHASASTLNLVRAFTTGGYADLRQVHAWNQ 192

Query: 254 DFTE 257
           DF +
Sbjct: 193 DFVK 196

Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (taxid: 100226)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
224063263	531	2-dehydro-3-deoxyphosphoheptonate aldola	0.972	0.472	0.796	1e-115
224084626	531	2-dehydro-3-deoxyphosphoheptonate aldola	0.972	0.472	0.785	1e-112
255545782	535	Phospho-2-dehydro-3-deoxyheptonate aldol	0.976	0.471	0.784	1e-109
2398679	535	3-deoxy-D-arabino-heptulosonate 7-phosph	0.965	0.465	0.760	1e-108
76782190	539	putative 3-deoxy-D-arabino-heptulosonate	0.992	0.474	0.75	1e-108
114193	542	RecName: Full=Phospho-2-dehydro-3-deoxyh	0.961	0.457	0.742	1e-107
350534836	541	phospho-2-dehydro-3-deoxyheptonate aldol	1.0	0.476	0.706	1e-107
262181539	548	3-deoxy-D-arabino-heptulosonate-7-phosph	0.996	0.468	0.715	1e-106
169475	509	3-deoxy-D-arabino-heptulosonate 7-phosph	0.949	0.481	0.755	1e-106
584777	538	RecName: Full=Phospho-2-dehydro-3-deoxyh	0.949	0.455	0.755	1e-106

>gi|224063263|ref|XP_002301067.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa] gi|222842793|gb|EEE80340.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/261 (79%), Positives = 226/261 (86%), Gaps = 10/261 (3%)

Query: 6   STSITPTKSSFVQPQSQP-----FITKPRSNIHPISAVHAADSAKPPSAVKT---TTKAP 57
           S+S+ PTKS  + P ++P     F TKP  +I  ISAVH+AD +K PS +KT   T+   
Sbjct: 5   SSSVIPTKS--LIPSNKPHHPCFFTTKPSRSILHISAVHSADPSKSPSPIKTPAATSTKA 62

Query: 58  EPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEE 117
             V  T+NVG  KWTV+SWKSKKALQLPEYPNKE+L+SVL+TLD FPPIVFAGEAR+LEE
Sbjct: 63  ATVAPTTNVGTGKWTVESWKSKKALQLPEYPNKEDLDSVLETLDAFPPIVFAGEARNLEE 122

Query: 118 RLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAG 177
           RLAEAAMG AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAG
Sbjct: 123 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAG 182

Query: 178 QFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAF 237
           QFAKPRSDP EEKNGVKLPSYRGDNVNGDAFDEKSR PDPQR+IRAYCQSAATLNLLRAF
Sbjct: 183 QFAKPRSDPLEEKNGVKLPSYRGDNVNGDAFDEKSRIPDPQRMIRAYCQSAATLNLLRAF 242

Query: 238 ATGGYAAMQRVTQWNLDFTEH 258
           ATGGYAAMQRVTQWNLDFTEH
Sbjct: 243 ATGGYAAMQRVTQWNLDFTEH 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084626|ref|XP_002307364.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa] gi|118486265|gb|ABK94974.1| unknown [Populus trichocarpa] gi|222856813|gb|EEE94360.1| 2-dehydro-3-deoxyphosphoheptonate aldolase/ 3-deoxy-d-arabino-heptulosonate 7-phosphate synthetase [Populus trichocarpa]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/261 (78%), Positives = 224/261 (85%), Gaps = 10/261 (3%)

Query: 6   STSITPTKSSFVQPQSQP-----FITKPRSNIHPISAVHAADSAKPPSAVKT---TTKAP 57
           S+SI P+KS  + P ++P     F TKP  +   ISAVH+AD +K P  +KT   T+   
Sbjct: 5   SSSIIPSKS--LIPSNKPHQPCFFTTKPSRSTLRISAVHSADPSKSPPPIKTPAATSTKA 62

Query: 58  EPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEE 117
             V  T NVG  KWTV+SWKSKKALQLPEYP+KE+ +SVLKTLD FPPIVFAGEARSLEE
Sbjct: 63  TTVAPTVNVGAGKWTVESWKSKKALQLPEYPDKEDFDSVLKTLDAFPPIVFAGEARSLEE 122

Query: 118 RLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAG 177
           +LAEAAMG AFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPV+KVGR+AG
Sbjct: 123 KLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVIKVGRLAG 182

Query: 178 QFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAF 237
           QFAKPRSDPFEEK+GVKLPSYRGDNVNGDAFDEKSR PDPQR+IRAYCQSAATLNLLRAF
Sbjct: 183 QFAKPRSDPFEEKDGVKLPSYRGDNVNGDAFDEKSRIPDPQRMIRAYCQSAATLNLLRAF 242

Query: 238 ATGGYAAMQRVTQWNLDFTEH 258
           ATGGYAAMQRVTQWNLDFTEH
Sbjct: 243 ATGGYAAMQRVTQWNLDFTEH 263

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545782|ref|XP_002513951.1| Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis] gi|223547037|gb|EEF48534.1| Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/264 (78%), Positives = 220/264 (83%), Gaps = 12/264 (4%)

Query: 6   STSITPTKS--SFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSA-------VKTTTKA 56
           STSI PT S  S ++P         RS +H ISAVH+A+ +K P         +KT+  A
Sbjct: 5   STSILPTNSFISSIKPHQPSPPPSSRSILH-ISAVHSAEPSKNPIGKQQQQQPLKTSAAA 63

Query: 57  PEPVLK--TSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARS 114
                   +SNV   KW++DSWKSKKALQLPEYPNKEELESVLKTLD FPPIVFAGEARS
Sbjct: 64  TATTAAAPSSNVVSGKWSIDSWKSKKALQLPEYPNKEELESVLKTLDAFPPIVFAGEARS 123

Query: 115 LEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGR 174
           LEE+LAEAAMG AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPVVKVGR
Sbjct: 124 LEEKLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVVKVGR 183

Query: 175 MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLL 234
           MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSR PDPQR+IRAYCQSAATLNLL
Sbjct: 184 MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRIPDPQRMIRAYCQSAATLNLL 243

Query: 235 RAFATGGYAAMQRVTQWNLDFTEH 258
           RAFATGGYAAMQRVTQWNLDFTEH
Sbjct: 244 RAFATGGYAAMQRVTQWNLDFTEH 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2398679|emb|CAA75092.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Morinda citrifolia]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/255 (76%), Positives = 214/255 (83%), Gaps = 6/255 (2%)

Query: 6   STSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLK--T 63
           S  + P  S+FV   S+P I     ++ PISAVHAAD  + P+    T  +  P +    
Sbjct: 20  SQPLLPKTSNFVSNPSKPSI----RSVEPISAVHAADKPQKPTPPSATVSSAVPTVSAPV 75

Query: 64  SNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAA 123
             +  +KWT++SWK+KKALQLPEYP++ ELESVLKTLD FPPIVFAGEARSLEERLAEAA
Sbjct: 76  VKIPEKKWTLESWKTKKALQLPEYPDQVELESVLKTLDSFPPIVFAGEARSLEERLAEAA 135

Query: 124 MGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPR 183
           MG AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPR
Sbjct: 136 MGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPR 195

Query: 184 SDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYA 243
           S+PFEEKNGVKLPSYRGDNVNGDAFD KSR PDPQR+IRAYCQ+AATLNLLRAFATGGYA
Sbjct: 196 SEPFEEKNGVKLPSYRGDNVNGDAFDAKSRAPDPQRMIRAYCQAAATLNLLRAFATGGYA 255

Query: 244 AMQRVTQWNLDFTEH 258
           AMQRVTQWNLDFTEH
Sbjct: 256 AMQRVTQWNLDFTEH 270

Source: Morinda citrifolia

Species: Morinda citrifolia

Genus: Morinda

Family: Rubiaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76782190|gb|ABA54865.1| putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 3 [Fagus sylvatica]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/276 (75%), Positives = 222/276 (80%), Gaps = 20/276 (7%)

Query: 1   MALV---GSTSITPTKSSFVQPQS--------QP-FITKPRSNIHPISAVHAADSAKPPS 48
           MAL    GS+ + PTKS F+Q QS        QP F  KPRS +  ISAVHAA+ AK P 
Sbjct: 1   MALTSSSGSSVVIPTKS-FIQTQSLVPSLKSHQPSFSIKPRS-LPSISAVHAAEPAKNPI 58

Query: 49  AVKTTTK------APEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDD 102
                 K        +    T N  P KWT++SWK+KKALQLPEYP++E   SVL+TL+ 
Sbjct: 59  VSDKPVKQQITPTTTKTTTSTHNAVPGKWTLESWKTKKALQLPEYPDQEAFNSVLETLEA 118

Query: 103 FPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM 162
           FPPIVFAGEAR+LEE+L EAAMG AFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM
Sbjct: 119 FPPIVFAGEARNLEEKLGEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM 178

Query: 163 FGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIR 222
           FGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSR PDPQRLIR
Sbjct: 179 FGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRTPDPQRLIR 238

Query: 223 AYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           AYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Sbjct: 239 AYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 274

Source: Fagus sylvatica

Species: Fagus sylvatica

Genus: Fagus

Family: Fagaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|114193|sp|P27608.1|AROF_TOBAC RecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1; AltName: Full=DAHP synthase 1; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase 1; Flags: Precursor gi|170225|gb|AAA34068.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Nicotiana tabacum] gi|228697|prf||1808327A deoxyheptulosonate phosphate synthase

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/264 (74%), Positives = 213/264 (80%), Gaps = 16/264 (6%)

Query: 11  PTKSSFVQPQS---QPF--------ITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEP 59
           P KS  VQ QS    P          TKP   + PISA+H++DS+K P      +  P P
Sbjct: 14  PNKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSP 73

Query: 60  -----VLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARS 114
                    + V   +WTV+SWKSKKALQLPEYPN+EEL+SVLKT+++FPPIVFAGEARS
Sbjct: 74  PAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARS 133

Query: 115 LEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGR 174
           LEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGR
Sbjct: 134 LEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGR 193

Query: 175 MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLL 234
           MAGQFAKPRSD FEEKNGVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLL
Sbjct: 194 MAGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLL 253

Query: 235 RAFATGGYAAMQRVTQWNLDFTEH 258
           RAFATGGYAAMQR+ QWNLDFTEH
Sbjct: 254 RAFATGGYAAMQRINQWNLDFTEH 277

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350534836|ref|NP_001234418.1| phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [Solanum lycopersicum] gi|584778|sp|P37216.1|AROG_SOLLC RecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2; AltName: Full=DAHP synthase 2; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase 2; Flags: Precursor gi|410488|emb|CAA79856.1| phospho-2-dehydro-3-deoxyheptonate aldolase [Solanum lycopersicum]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/276 (70%), Positives = 216/276 (78%), Gaps = 18/276 (6%)

Query: 1   MALVGSTSITPTKSSFVQPQSQPFITKPRSN-------------IHPISAVHAADSAKPP 47
           MAL  +T+     S+    Q+QP ++ P  N             + PI+AVH++DS K P
Sbjct: 1   MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKNP 60

Query: 48  SAVKTTTKAPEPVLKTSN-----VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDD 102
                 TK+  P    +      V   +W VDSWKSKKALQLPEYP++EEL SVLKT+D+
Sbjct: 61  IVSDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRSVLKTIDE 120

Query: 103 FPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM 162
           FPPIVFAGEARSLEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLM
Sbjct: 121 FPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLM 180

Query: 163 FGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIR 222
           FGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIR
Sbjct: 181 FGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIR 240

Query: 223 AYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           AYCQSAATLNLLRAFATGGYAAMQR+ QWNLDFTEH
Sbjct: 241 AYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEH 276

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|262181539|gb|ACY29660.1| 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase 02 [Vitis vinifera]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/281 (71%), Positives = 224/281 (79%), Gaps = 24/281 (8%)

Query: 1   MALVGSTSITPTKS-SFVQPQSQP----------FITKP--RSNIHPISAVHAADSAKPP 47
           MAL G TSI PT S SF+Q Q+ P           +T P   ++I PISAVH+AD +K P
Sbjct: 1   MALAG-TSIIPTNSNSFLQTQALPSSTSKSHQPYLLTNPTKSASIRPISAVHSADPSKNP 59

Query: 48  ----------SAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVL 97
                     +A  ++        K S   P KW+++SWKSKKALQLPEYP+ E+LESVL
Sbjct: 60  VVSDKSPKAPAAAASSAATTASTTKVSGAVPGKWSIESWKSKKALQLPEYPDPEDLESVL 119

Query: 98  KTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 157
           +TL+ FPPIVFAGEARSLEERLAEAAMG AFLLQGGDCAESFKEFNANNIRDTFRILLQM
Sbjct: 120 RTLEAFPPIVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQM 179

Query: 158 GVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDP 217
           G VLMFGGQ+PV+KVGRMAGQFAKPRS+ FEEKNGVKLPSYRGDNVNGDAFD KSR PDP
Sbjct: 180 GAVLMFGGQVPVIKVGRMAGQFAKPRSESFEEKNGVKLPSYRGDNVNGDAFDVKSRTPDP 239

Query: 218 QRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           QR+IRAYCQ+AATLNLLRAFATGGYA+MQRVTQWNLDFTEH
Sbjct: 240 QRMIRAYCQAAATLNLLRAFATGGYASMQRVTQWNLDFTEH 280

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|169475|gb|AAA33810.1| 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (aro1; EC 4.1.2.15) precursor [Solanum tuberosum]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/254 (75%), Positives = 209/254 (82%), Gaps = 9/254 (3%)

Query: 10  TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSN---- 65
           +P K++F    S    TK    + PISAVH++DS K P      +K+  P    +     
Sbjct: 27  SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAP 82

Query: 66  -VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAM 124
            V   +W VDSWKSKKALQLPEYPN+EEL SVLKT+D+FPPIVFAGEARSLEERL EAAM
Sbjct: 83  AVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAM 142

Query: 125 GKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRS 184
           G+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRS
Sbjct: 143 GRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRS 202

Query: 185 DPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAA 244
           D FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRAFATGGYAA
Sbjct: 203 DSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAA 262

Query: 245 MQRVTQWNLDFTEH 258
           MQR+ QWNLDFTEH
Sbjct: 263 MQRINQWNLDFTEH 276

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|584777|sp|P21357.2|AROF_SOLTU RecName: Full=Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic; AltName: Full=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1; AltName: Full=DAHP synthase 1; AltName: Full=Phospho-2-keto-3-deoxyheptonate aldolase 1; Flags: Precursor

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/254 (75%), Positives = 209/254 (82%), Gaps = 9/254 (3%)

Query: 10  TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSN---- 65
           +P K++F    S    TK    + PISAVH++DS K P      +K+  P    +     
Sbjct: 27  SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAP 82

Query: 66  -VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAM 124
            V   +W VDSWKSKKALQLPEYPN+EEL SVLKT+D+FPPIVFAGEARSLEERL EAAM
Sbjct: 83  AVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAM 142

Query: 125 GKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRS 184
           G+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRS
Sbjct: 143 GRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRS 202

Query: 185 DPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAA 244
           D FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRAFATGGYAA
Sbjct: 203 DSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAA 262

Query: 245 MQRVTQWNLDFTEH 258
           MQR+ QWNLDFTEH
Sbjct: 263 MQRINQWNLDFTEH 276

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	258
TAIR|locus:2009547	527	AT1G22410 [Arabidopsis thalian	0.988	0.483	0.657	3.8e-85
TAIR|locus:2005525	525	DHS1 "3-deoxy-D-arabino-heptul	0.937	0.460	0.664	1.3e-82
TAIR|locus:2005526	507	DHS2 "3-deoxy-d-arabino-heptul	0.910	0.463	0.656	7.4e-82
TIGR_CMR|SPO_1942	465	SPO_1942 "3-deoxy-7-phosphohep	0.728	0.404	0.547	1.5e-53
TIGR_CMR|CJE_0816	446	CJE_0816 "3-deoxy-7-phosphohep	0.717	0.414	0.556	1.5e-51
ASPGD|ASPL0000049433	482	AN1673 [Emericella nidulans (t	0.724	0.387	0.465	4.2e-40
UNIPROTKB|G4N683	466	MGG_08596 "Phospho-2-dehydro-3	0.709	0.392	0.454	1.1e-37
UNIPROTKB|A0R033	464	aroG "Phospho-2-dehydro-3-deox	0.693	0.385	0.426	3.6e-34
UNIPROTKB|O53512	462	aroG "Phospho-2-dehydro-3-deox	0.693	0.387	0.426	2.5e-33

TAIR|locus:2009547 AT1G22410 [Arabidopsis thaliana (taxid:3702)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 173/263 (65%), Positives = 197/263 (74%)

Query:     1 MALV-GSTSITPTKSSFV---QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKA 56
             MAL+ GS +++  KSS +   QP     +++P S    ISAV         S+    T  
Sbjct:     1 MALMNGSMNLSSVKSSMINHRQPNFSSAVSRPTS--FRISAVQTDPKTPAASSASAATTT 58

Query:    57 PEPVLKTS--NVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXX 114
             P  + K    NVG  KW  +SW++KKALQ P+YP+   LE+VL+T++ FPPIVFAG    
Sbjct:    59 PATLTKPVGVNVGKGKWAPESWRTKKALQQPDYPDLAALEAVLETIEAFPPIVFAGEARL 118

Query:   115 XXXXXXXXXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGR 174
                      MG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQ+PVVKVGR
Sbjct:   119 LEERLGQAAMGEAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQVPVVKVGR 178

Query:   175 MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLL 234
             MAGQFAKPRSD FEEK+GVKLPSYRGDN+NGDAFD KSR PDPQR+IRAYCQSAATLNLL
Sbjct:   179 MAGQFAKPRSDSFEEKDGVKLPSYRGDNINGDAFDSKSRIPDPQRMIRAYCQSAATLNLL 238

Query:   235 RAFATGGYAAMQRVTQWNLDFTE 257
             RAFATGGYAAMQRVTQWNLDFTE
Sbjct:   239 RAFATGGYAAMQRVTQWNLDFTE 261

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0009536 "plastid" evidence=IDA

TAIR|locus:2005525 DHS1 "3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 170/256 (66%), Positives = 197/256 (76%)

Query:     5 GSTSITPT--KSSFVQPQSQPFI-TKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVL 61
             G  S  P+  +SSF      P + TKP+S ++ ++AVHAA+ A+   +VK      E V 
Sbjct:    17 GDLSHRPSNRQSSFT---FHPAVNTKPKS-VNLVTAVHAAEPARNAVSVK------ESVA 66

Query:    62 KTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXX 121
              +S+ G  KWT +SWK KKALQLP+YPN  ELESVLKT++ FPPIVFAG           
Sbjct:    67 SSSS-GALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLEERLAD 125

Query:   122 XXMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAK 181
               +GKAFLLQGGDCAESFKEFNA NIRDTFR+LLQM +VL FGGQ+PV+KVGRMAGQFAK
Sbjct:   126 AAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAK 185

Query:   182 PRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGG 241
             PRSD FEEK+GVKLPSY+GDN+NGD FDEKSR PDP R+IRAY QSAATLNLLRAFATGG
Sbjct:   186 PRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLLRAFATGG 245

Query:   242 YAAMQRVTQWNLDFTE 257
             YAA+QRVTQWNLDF E
Sbjct:   246 YAAIQRVTQWNLDFVE 261

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA;IGI;IDA;TAS

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=ISM;TAS

GO:0009423 "chorismate biosynthetic process" evidence=IGI;IDA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009617 "response to bacterium" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2005526 DHS2 "3-deoxy-d-arabino-heptulosonate 7-phosphate synthase" [Arabidopsis thaliana (taxid:3702)]

 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 166/253 (65%), Positives = 195/253 (77%)

Query:     9 ITPTKSSFVQPQS-QPFITKPRSNIH--PISAVHAADSAKPPSAVKTTTKAPEPVLKTSN 65
             +T   SS +  +S  P+   PR  I   P+ AVH+ D    P   K+T  A   V     
Sbjct:     2 VTLNASSPLTTKSFLPYRHAPRRPISFSPVFAVHSTD----PK--KSTQSASASV----- 50

Query:    66 VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMG 125
                 KW+++SWKSKKALQLP+YP++++++SVL+TL  FPPIVFAG             MG
Sbjct:    51 ----KWSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMG 106

Query:   126 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSD 185
             +AF+LQGGDCAESFKEFNANNIRDTFR+LLQMGVVLMFGGQ+PV+KVGRMAGQFAKPRSD
Sbjct:   107 QAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSD 166

Query:   186 PFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAM 245
             PFEEK+GVKLPSYRGDN+NGDAFDEKSR PDP R++RAY QS ATLNLLRAFATGGYAAM
Sbjct:   167 PFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATGGYAAM 226

Query:   246 QRVTQWNLDFTEH 258
             QRV+QWNLDFT+H
Sbjct:   227 QRVSQWNLDFTQH 239

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA;IGI

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA;TAS

GO:0009507 "chloroplast" evidence=ISM;IDA;TAS

GO:0009423 "chorismate biosynthetic process" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0009534 "chloroplast thylakoid" evidence=IDA

TIGR_CMR|SPO_1942 SPO_1942 "3-deoxy-7-phosphoheptulonate synthase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 103/188 (54%), Positives = 138/188 (73%)

Query:    70 KWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFL 129
             +W   +W++K  +Q+P+Y ++ EL  V   L  FPP+VFAG              G+AFL
Sbjct:    12 EWQKSNWRAKPRVQMPDYTDQAELARVEAQLSQFPPLVFAGEARRLKRHLGAAGRGEAFL 71

Query:   130 LQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEE 189
             LQGGDCAESF +F+A+ IRDTF+++LQM +VL FG ++PV+KVGRMAGQFAKPRS P E 
Sbjct:    72 LQGGDCAESFDQFSADGIRDTFKVMLQMAMVLTFGAKVPVIKVGRMAGQFAKPRSAPTEV 131

Query:   190 KNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVT 249
              +GV+LPSYRGD +N  AF  ++R P+PQ++++AY Q+AATLNLLRAF+TGG+A M RV 
Sbjct:   132 LDGVELPSYRGDIINELAFTPEARMPNPQKMLQAYTQAAATLNLLRAFSTGGFADMNRVH 191

Query:   250 QWNLDFTE 257
              W L FT+
Sbjct:   192 SWTLGFTD 199

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

TIGR_CMR|CJE_0816 CJE_0816 "3-deoxy-7-phosphoheptulonate synthase" [Campylobacter jejuni RM1221 (taxid:195099)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 103/185 (55%), Positives = 126/185 (68%)

Query:    71 WTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLL 130
             W  +SWK+    Q P YP++EE+  VL  L+  PP+VFAG               +AFLL
Sbjct:     2 WAKNSWKNYPIKQQPIYPDQEEMNRVLARLEKLPPLVFAGEVRNLQKSLARVCKKEAFLL 61

Query:   131 QGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEK 190
             QGGDCAESF+ F A NIRD F+ILLQM +VL F G  PV+K+GR+AGQFAKPRS  FEE 
Sbjct:    62 QGGDCAESFENFGAVNIRDMFKILLQMAIVLTFAGGCPVIKIGRIAGQFAKPRSSDFEEL 121

Query:   191 NGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQ 250
             +G+ LPSYRGD +NG  F E++R PDP R++ AY QSA TLNLLR FA GG A +  V +
Sbjct:   122 DGISLPSYRGDIINGFEFSEQARIPDPHRMLEAYYQSATTLNLLRGFAKGGLADLHEVHR 181

Query:   251 WNLDF 255
             WNL F
Sbjct:   182 WNLGF 186

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS

GO:0009423 "chorismate biosynthetic process" evidence=ISS

ASPGD|ASPL0000049433 AN1673 [Emericella nidulans (taxid:162425)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 88/189 (46%), Positives = 116/189 (61%)

Query:    66 VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMG 125
             +G + W   SW SK   Q   Y + E ++S L+ L+  PP+V                +G
Sbjct:     1 MGAEDWNPKSWTSKPIKQDVVYEDVEGVQSALRKLEKLPPLVTTHEIANLKKSLKNVALG 60

Query:   126 KAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSD 185
             KAF+LQGGDCAE F   N + I    ++LLQM +VL++G  MPVV++ R+AGQFAKPRS+
Sbjct:    61 KAFVLQGGDCAELFDYCNQDMIEAKVKLLLQMSLVLIWGANMPVVRIARIAGQFAKPRSN 120

Query:   186 PFEEKNGVKLPSYRGDNVNG-DAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAA 244
             P E  NGV++PS+RGDN+NG DA  + SR PDP RL+ AY  SAATLN LRA  + G A 
Sbjct:   121 PMEVVNGVEMPSFRGDNINGFDATPD-SRRPDPSRLVSAYFHSAATLNYLRASLSSGLAD 179

Query:   245 MQRVTQWNL 253
             +     W L
Sbjct:   180 LHSPLDWGL 188

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IEA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|G4N683 MGG_08596 "Phospho-2-dehydro-3-deoxyheptonate aldolase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 84/185 (45%), Positives = 110/185 (59%)

Query:    69 QKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAF 128
             Q W  DSW+SK   Q PEYP++E L+     L   PPIV                 GKAF
Sbjct:     6 QGWAPDSWRSKPIKQCPEYPDQEALKKATTQLKRLPPIVHPREIERLKELLSDVAHGKAF 65

Query:   129 LLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFE 188
             LLQGGDCAE F     + I    ++LLQM +VL++GG   VV++GRMAGQ+AKPRS P E
Sbjct:    66 LLQGGDCAELFDYCEQSTIESKIKLLLQMSLVLIWGGNKRVVRIGRMAGQYAKPRSSPTE 125

Query:   189 EKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRV 248
               +G ++PS+RGD +NG   D+  R  DP R+++AY  S+ATLN +RA  + G A + R 
Sbjct:   126 IVDGREVPSFRGDILNGFPLDQ--RELDPGRMVQAYHHSSATLNYVRASISSGIADLHRP 183

Query:   249 TQWNL 253
               W L
Sbjct:   184 LDWGL 188

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|A0R033 aroG "Phospho-2-dehydro-3-deoxyheptonate aldolase AroG" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 78/183 (42%), Positives = 110/183 (60%)

Query:    73 VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQG 132
             +DS  +K A+Q P + + +  +++   L+  PP+                  GKAFLLQG
Sbjct:    26 LDSALAKPAVQQPSW-DPDAAKAMRTVLESVPPVTVPSEIEKLKGLLADVAQGKAFLLQG 84

Query:   133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
             GDCAE+F +    +IR   R LLQM VVL +G  MPVVKV R+AGQ+AKPRS    + + 
Sbjct:    85 GDCAETFVDNTEPHIRANIRTLLQMAVVLTYGASMPVVKVARIAGQYAKPRSS---DVDA 141

Query:   193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
             + L SYRGD +NG A D  +R  DP RL+RAY  ++A +NL+RA  + G A++  V +WN
Sbjct:   142 LGLKSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLMRALTSSGLASLHLVHEWN 201

Query:   253 LDF 255
              +F
Sbjct:   202 REF 204

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0030145 "manganese ion binding" evidence=ISS

UNIPROTKB|O53512 aroG "Phospho-2-dehydro-3-deoxyheptonate aldolase AroG" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 78/183 (42%), Positives = 107/183 (58%)

Query:    73 VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQG 132
             +D+  +K A Q P +P  + L ++   L+  PP+                  G+AFLLQG
Sbjct:    26 LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 84

Query:   133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
             GDCAE+F +    +IR   R LLQM VVL +G  MPVVKV R+AGQ+AKPRS   +    
Sbjct:    85 GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADID---A 141

Query:   193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
             + L SYRGD +NG A D  +R  DP RL+RAY  ++A +NL+RA  + G A++  V  WN
Sbjct:   142 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 201

Query:   253 LDF 255
              +F
Sbjct:   202 REF 204


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      258       245   0.00099  113 3  11 22  0.46    33
                                                     32  0.45    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  188 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.78u 0.10s 22.88t   Elapsed:  00:00:01
  Total cpu time:  22.78u 0.10s 22.88t   Elapsed:  00:00:01
  Start:  Mon May 20 23:08:17 2013   End:  Mon May 20 23:08:18 2013

GO:0003849 "3-deoxy-7-phosphoheptulonate synthase activity" evidence=IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009423 "chorismate biosynthetic process" evidence=TAS

GO:0030145 "manganese ion binding" evidence=IDA

GO:0040007 "growth" evidence=IMP

GO:0051260 "protein homooligomerization" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P29976	AROF_ARATH	2, ., 5, ., 1, ., 5, 4	0.7413	0.8682	0.4266	yes	no
Q75W16	AROG_ORYSJ	2, ., 5, ., 1, ., 5, 4	0.7860	0.8682	0.4155	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.5.1.54	0.824
3rd Layer	2.5.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	258
PLN02291	474	PLN02291, PLN02291, phospho-2-dehydro-3-deoxyhepto	1e-154
pfam01474	437	pfam01474, DAHP_synth_2, Class-II DAHP synthetase	1e-125
TIGR01358	443	TIGR01358, DAHP_synth_II, 3-deoxy-7-phosphoheptulo	1e-113
COG3200	445	COG3200, AroG, 3-deoxy-D-arabino-heptulosonate 7-p	1e-102

>gnl|CDD|177928 PLN02291, PLN02291, phospho-2-dehydro-3-deoxyheptonate aldolase

 Score =  438 bits (1129), Expect = e-154
 Identities = 180/221 (81%), Positives = 196/221 (88%), Gaps = 14/221 (6%)

Query: 38  VHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVL 97
           VHAA+ +K P               +S  GP+KW+ DSW+SKKALQLPEYP++ ELE VL
Sbjct: 1   VHAAEPSKTPV--------------SSAGGPKKWSPDSWRSKKALQLPEYPDQAELEEVL 46

Query: 98  KTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQM 157
           KTL+ FPP+VFAGEARSLEERLAEAAMG+AFLLQGGDCAESFKEFNANNIRDTFR+LLQM
Sbjct: 47  KTLEAFPPLVFAGEARSLEERLAEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRVLLQM 106

Query: 158 GVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDP 217
           GVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEK+GVKLPSYRGDN+NGDAFDEKSR PDP
Sbjct: 107 GVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRRPDP 166

Query: 218 QRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           QR++RAY QSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH
Sbjct: 167 QRMVRAYSQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 207

Length = 474

>gnl|CDD|216520 pfam01474, DAHP_synth_2, Class-II DAHP synthetase family

 Score =  361 bits (930), Expect = e-125
 Identities = 121/189 (64%), Positives = 145/189 (76%)

Query: 70  KWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFL 129
           +WT DSW+SK A Q PEYP+   L +VL  L   PP+VFAGE R L+E+LA+ A G+AFL
Sbjct: 1   EWTPDSWRSKPAAQQPEYPDPAALAAVLAELASLPPLVFAGEIRRLKEQLADVARGEAFL 60

Query: 130 LQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEE 189
           LQGGDCAESF EF A++IRD F++LLQM VVL +G   PVVKVGR+AGQFAKPRS   E 
Sbjct: 61  LQGGDCAESFAEFTADHIRDKFKVLLQMAVVLTYGAGKPVVKVGRIAGQFAKPRSSDTET 120

Query: 190 KNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVT 249
            +GV LPSYRGD +NG  F E++R PDPQRL+RAY QSAATLNLLRAFA GGYA + +V 
Sbjct: 121 VDGVTLPSYRGDIINGPEFTEEARRPDPQRLLRAYHQSAATLNLLRAFAQGGYADLHQVH 180

Query: 250 QWNLDFTEH 258
            WNL F ++
Sbjct: 181 DWNLGFVKN 189

Members of this family are aldolase enzymes that catalyze the first step of the shikimate pathway. Length = 437

>gnl|CDD|130425 TIGR01358, DAHP_synth_II, 3-deoxy-7-phosphoheptulonate synthase, class II

 Score =  332 bits (853), Expect = e-113
 Identities = 115/188 (61%), Positives = 144/188 (76%)

Query: 71  WTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLL 130
           W+  SW+SK A Q P YP+   LE+VL TL   PP+VFAGE R L+ +LA+ A G+AFLL
Sbjct: 1   WSPQSWRSKPAAQQPTYPDAGALEAVLDTLRSLPPLVFAGEIRRLKRQLAQVAEGEAFLL 60

Query: 131 QGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEK 190
           QGGDCAESFK+  A++IR+  R+LLQM VVL +G  +PVVKVGR+AGQ+AKPRS P E +
Sbjct: 61  QGGDCAESFKDCTADHIRNKLRVLLQMAVVLTYGASLPVVKVGRIAGQYAKPRSAPTETR 120

Query: 191 NGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQ 250
           +GV LPSYRGD +NG AF E +R PDP+RL+RAY QSAATLNL+RA  TGGYA + +V  
Sbjct: 121 DGVTLPSYRGDIINGPAFTEAARVPDPRRLVRAYHQSAATLNLVRALTTGGYADLHQVHY 180

Query: 251 WNLDFTEH 258
           WNL+F  +
Sbjct: 181 WNLEFVGY 188

This model represents the class II family of 3-deoxy-7-phosphoheptulonate synthase, aka phospho-2-dehydro-3-deoxyheptonate aldolase, as found in plants and some bacteria. It shows some similarity to the class I family found in many bacteria. The enzyme catalyzes the first of 7 steps in the biosynthesis of chorismate, that last common precursor of all three aromatic amino acids. Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog [Amino acid biosynthesis, Aromatic amino acid family]. Length = 443

>gnl|CDD|225741 COG3200, AroG, 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]

 Score =  305 bits (782), Expect = e-102
 Identities = 115/188 (61%), Positives = 140/188 (74%)

Query: 68  PQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKA 127
           P  W  +SW++K   Q P YP+ + L  V   L  +PP+VFAGEAR L+E+LA  A G+A
Sbjct: 2   PTTWLPNSWRAKPIQQQPTYPDAQALARVEARLRSYPPLVFAGEARRLQEQLARVAKGEA 61

Query: 128 FLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPF 187
           FLLQGGDCAESF +  A+NIRD FR+LLQM VVL F G  PVVKVGR+AGQFAKPRS   
Sbjct: 62  FLLQGGDCAESFADHGADNIRDNFRVLLQMAVVLTFAGSRPVVKVGRIAGQFAKPRSSDH 121

Query: 188 EEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQR 247
           E+  GV LPSYRGD +NG  FD ++R PDP+RL++AY QSAATLNLLRAFA+GG A ++ 
Sbjct: 122 EQLGGVTLPSYRGDIINGIEFDAEAREPDPERLLKAYAQSAATLNLLRAFASGGLADLEN 181

Query: 248 VTQWNLDF 255
           V +WNL F
Sbjct: 182 VHRWNLGF 189

Length = 445

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	258
PLN02291	474	phospho-2-dehydro-3-deoxyheptonate aldolase	100.0
TIGR01358	443	DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthas	100.0
PF01474	439	DAHP_synth_2: Class-II DAHP synthetase family; Int	100.0
COG3200	445	AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (	100.0

>PLN02291 phospho-2-dehydro-3-deoxyheptonate aldolase

Probab=100.00  E-value=1.4e-87  Score=646.05  Aligned_cols=190  Identities=90%  Similarity=1.417  Sum_probs=187.9

Q ss_pred             CCCCccccccCccccCCCCCCHHHHHHHHHHhccCCCccCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhhcchhhHH
Q 043430           69 QKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIR  148 (258)
Q Consensus        69 ~~Ws~~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~a~Ei~~Lr~~La~vA~G~AFlLQgGDCAEsF~e~~~~~I~  148 (258)
                      ..|+|+|||++|++|||+|||+++|+.|+++|+++|||||++||++||++||+||+|+|||||||||||+|+||++++|+
T Consensus        18 ~~W~p~sWr~~pa~QqP~y~D~~~l~~v~~~L~~~PPLV~a~Ei~~Lr~~LA~va~G~AFlLQgGDCAE~F~~~~~~~ir   97 (474)
T PLN02291         18 KKWSPDSWRSKKALQLPEYPDQAELEEVLKTLEAFPPLVFAGEARSLEERLAEAAMGRAFLLQGGDCAESFKEFNANNIR   97 (474)
T ss_pred             CCCChhhhhcCccccCCCCCCHHHHHHHHHHHhcCCCcCCHHHHHHHHHHHHHHhcCCeEEEeCCchhhhhhhhCHHHHH
Confidence            45999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCceEEeeccccCCCCCCCCchhhcCCeecccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 043430          149 DTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSA  228 (258)
Q Consensus       149 ~k~~~Llqma~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~v~G~~LPsYRGD~VNg~~f~~~aR~PDP~RLl~aY~~Sa  228 (258)
                      +|+++|+|||.||++++++|||||||||||||||||+++|++||++||||||||||+++||+++|+|||+|||+||+||+
T Consensus        98 ~k~~~llqMa~vL~~~~~~PVVkVGRiAGQyAKPRSs~~E~~dGv~LPsYRGD~VN~~e~t~~aR~PDP~Rll~aY~~Sa  177 (474)
T PLN02291         98 DTFRVLLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRRPDPQRMVRAYSQSA  177 (474)
T ss_pred             HHHHHHHHHHHHHhhcCCCCeEEecccccccCCCCCCCcccCCCEeccccCCccccCcCCCHhhcCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccccccccccccchhhhcC
Q 043430          229 ATLNLLRAFATGGYAAMQRVTQWNLDFTEH  258 (258)
Q Consensus       229 atLn~lRa~~~gG~Adl~~~~~W~l~fv~~  258 (258)
                      +|||+||+|..|||||||++++||++|+++
T Consensus       178 atlnllRa~~~gg~adl~~~~~W~~~fv~~  207 (474)
T PLN02291        178 ATLNLLRAFATGGYAAMQRVTQWNLDFTEH  207 (474)
T ss_pred             HHHHHHHHHhcCCchhhccccccchhhhcc
Confidence            999999999999999999999999999974

>TIGR01358 DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthase, class II

Probab=100.00  E-value=3.2e-87  Score=640.40  Aligned_cols=188  Identities=61%  Similarity=1.061  Sum_probs=186.8

Q ss_pred             CCccccccCccccCCCCCCHHHHHHHHHHhccCCCccCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhhcchhhHHHH
Q 043430           71 WTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDT  150 (258)
Q Consensus        71 Ws~~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~a~Ei~~Lr~~La~vA~G~AFlLQgGDCAEsF~e~~~~~I~~k  150 (258)
                      |+|+|||++|++|||+|||+++|+.|+++|+++||||+++||++||++||+||+|+|||||||||||+|+||++++|++|
T Consensus         1 w~p~sWr~~pa~QqP~y~D~~~l~~v~~~L~~~PPLV~a~Ei~~Lr~~La~va~G~aFlLQgGDCAE~F~~~~~~~i~~k   80 (443)
T TIGR01358         1 WSPQSWRSKPAAQQPTYPDAGALEAVLDTLRSLPPLVFAGEIRRLKRQLAQVAEGEAFLLQGGDCAESFKDCTADHIRNK   80 (443)
T ss_pred             CCchhhhcCccccCCCCCCHHHHHHHHHHHhcCCCcCCHHHHHHHHHHHHHHhCCCEEEEeCccccCchhhcCHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCceEEeeccccCCCCCCCCchhhcCCeecccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 043430          151 FRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAAT  230 (258)
Q Consensus       151 ~~~Llqma~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~v~G~~LPsYRGD~VNg~~f~~~aR~PDP~RLl~aY~~Saat  230 (258)
                      +++|+|||.||++++++|||||||||||||||||+++|++||++||||||||||+++||+++|+|||+|||+||+||++|
T Consensus        81 ~~~llqMa~vl~~~~~~PVVkVGRiAGQyAKPRS~~~E~~~G~~LPsYRGD~VN~~e~t~~aR~PDP~Rll~aY~~saat  160 (443)
T TIGR01358        81 LRVLLQMAVVLTYGASLPVVKVGRIAGQYAKPRSAPTETRDGVTLPSYRGDIINGPAFTEAARVPDPRRLVRAYHQSAAT  160 (443)
T ss_pred             HHHHHHHHHHHhhcCCCCeEEecccccccCCCCCCCcccCCCEeccccCCccccCcCCChhhcCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccccccccccccchhhhcC
Q 043430          231 LNLLRAFATGGYAAMQRVTQWNLDFTEH  258 (258)
Q Consensus       231 Ln~lRa~~~gG~Adl~~~~~W~l~fv~~  258 (258)
                      ||+||+|..|||||||++++||++|+++
T Consensus       161 ln~lRa~~~gg~adl~~~~~W~~~f~~~  188 (443)
T TIGR01358       161 LNLVRALTTGGYADLHQVHYWNLEFVGY  188 (443)
T ss_pred             HHHHHHHhcCCchhhcccchhhhhhhhc
Confidence            9999999999999999999999999974

Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog.

>PF01474 DAHP_synth_2: Class-II DAHP synthetase family; InterPro: IPR002480 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family (2

Probab=100.00  E-value=4.6e-87  Score=638.82  Aligned_cols=188  Identities=62%  Similarity=1.075  Sum_probs=151.3

Q ss_pred             CCCccccccCccccCCCCCCHHHHHHHHHHhccCCCccCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhhcchhhHHH
Q 043430           70 KWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRD  149 (258)
Q Consensus        70 ~Ws~~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~a~Ei~~Lr~~La~vA~G~AFlLQgGDCAEsF~e~~~~~I~~  149 (258)
                      +|+|+||+++|++|||.|||+.+|+.|+++|+++||||+++||++||++||+||+|+|||||||||||+|+||++++|++
T Consensus         1 ~W~p~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~~~Ei~~Lr~~La~va~G~AFlLQgGDCAEsF~e~~~~~I~~   80 (439)
T PF01474_consen    1 EWSPSSWRSKPAAQQPEYPDPDALAEVLAKLASLPPLVFAGEIRRLREQLADVARGEAFLLQGGDCAESFAECTADHIRD   80 (439)
T ss_dssp             ---HHHHHTS--SS---S-HHHHH-HHHHHHTTS--SS-HHHHHHHHHHHHHHHTTSSEEEEEEESS--STT-SHHHHHH
T ss_pred             CCChhhHHhCCcccCCCCcCHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHcCCeEEEeCCCcccChhhcChHHHHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCceEEeeccccCCCCCCCCchhhcCCeecccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 043430          150 TFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAA  229 (258)
Q Consensus       150 k~~~Llqma~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~v~G~~LPsYRGD~VNg~~f~~~aR~PDP~RLl~aY~~Saa  229 (258)
                      |+++|+|||.+|++++++|||||||||||||||||+++|++||++||||||||||+++||+++|+|||+|||+||++|++
T Consensus        81 k~~~Llqma~vL~~~~~~PVVrVGRiAGQyAKPRS~~~E~vdG~~LPsyRGD~VN~~~~~~~aR~PDP~RlL~aY~~Saa  160 (439)
T PF01474_consen   81 KFKLLLQMALVLTYGAGKPVVRVGRIAGQYAKPRSSPTETVDGVELPSYRGDIVNGPEFTPEARRPDPQRLLRAYFHSAA  160 (439)
T ss_dssp             HHHHHHHHHHHHHHHHTS-EEEEEEBSS------S-SB----TTSSB----TTTS-SSSSHHHHS--THHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCeEEechhhhcccCCCCCCccCCCCccCcccccccccCCCCChhhcCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccccccccccccchhhhc
Q 043430          230 TLNLLRAFATGGYAAMQRVTQWNLDFTE  257 (258)
Q Consensus       230 tLn~lRa~~~gG~Adl~~~~~W~l~fv~  257 (258)
                      |||+||+|++|||||||++++||++||+
T Consensus       161 tLn~lRa~~~~G~Adl~~~~~W~~~fv~  188 (439)
T PF01474_consen  161 TLNLLRAFASGGFADLHHVHQWNLDFVR  188 (439)
T ss_dssp             HHHHHHHHHTSCCG-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCChhhhcccccchhhhhc
Confidence            9999999999999999999999999996

5.1.54 from EC) catalyse the first step in aromatic amino acid biosynthesis from chorismate. Class I (see IPR006218 from INTERPRO) includes bacterial and yeast enzymes; class II includes higher plants and various microorganisms []. The first step in the common pathway leading to the biosynthesis of aromatic compounds is the stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). This reaction is catalyzed by DAHP synthase, a metal-activated enzyme, which in microorganisms is the target for negative-feedback regulation by pathway intermediates or by end products.; GO: 0003849 3-deoxy-7-phosphoheptulonate synthase activity, 0009073 aromatic amino acid family biosynthetic process; PDB: 3NUD_A 3KGF_A 2W19_A 3NUE_B 3PFP_A 2B7O_B 3RZI_A 3NV8_B 2W1A_A.

>COG3200 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-83  Score=604.96  Aligned_cols=190  Identities=60%  Similarity=1.036  Sum_probs=188.3

Q ss_pred             CCCCccccccCccccCCCCCCHHHHHHHHHHhccCCCccCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhhcchhhHH
Q 043430           69 QKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIR  148 (258)
Q Consensus        69 ~~Ws~~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~a~Ei~~Lr~~La~vA~G~AFlLQgGDCAEsF~e~~~~~I~  148 (258)
                      +.|+|.||+++|++|||.|||..+|+.|.++|+++|||||++|+++|+++||+||.|+|||||||||||+|.|+++++||
T Consensus         3 ~~w~p~swr~kpi~Q~p~ypd~~~l~~v~a~L~~~PplvfAgEar~Lk~~LA~Va~g~AfLLQgGDCAEsf~~~~a~~Ir   82 (445)
T COG3200           3 TTWLPNSWRAKPIQQQPTYPDAQALARVEARLRSYPPLVFAGEARRLQEQLARVAKGEAFLLQGGDCAESFADHGADNIR   82 (445)
T ss_pred             cccCcchhhcCchhcCCCCCCHHHHHHHHHHHhcCCCeeecHHHHHHHHHHHHHhcCceEEEeCCcHHHHHHhcccHHHH
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCceEEeeccccCCCCCCCCchhhcCCeecccccCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 043430          149 DTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSA  228 (258)
Q Consensus       149 ~k~~~Llqma~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~v~G~~LPsYRGD~VNg~~f~~~aR~PDP~RLl~aY~~Sa  228 (258)
                      ++|++|+||++||+|++++|||||||||||||||||+++|+.+|++|||||||||||.+|++++|+|||+|||+||++|+
T Consensus        83 d~frvllqMAvVLtfa~~~PVvKVgRIAGQfAKPRSs~~e~~g~vtLpsYRGDiiNG~e~~~~~R~pdP~R~l~aY~qsa  162 (445)
T COG3200          83 DNFRVLLQMAVVLTFAGSRPVVKVGRIAGQFAKPRSSDHEQLGGVTLPSYRGDIINGIEFDAEAREPDPERLLKAYAQSA  162 (445)
T ss_pred             HHHHHHHHHHHHHHhccCCceEEeeeecccccCCCCCchhccCCeeccccccccccCccCChhhcCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcccccccccccccchhhhcC
Q 043430          229 ATLNLLRAFATGGYAAMQRVTQWNLDFTEH  258 (258)
Q Consensus       229 atLn~lRa~~~gG~Adl~~~~~W~l~fv~~  258 (258)
                      +|||+||+|+.||||||+.+|+||++||++
T Consensus       163 AtlNLlRafa~gG~A~L~~vh~W~l~Fv~~  192 (445)
T COG3200         163 ATLNLLRAFASGGLADLENVHRWNLGFVKN  192 (445)
T ss_pred             HHHHHHHHHhccccchHHHHHHHHHhhhcC
Confidence            999999999999999999999999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	258
2w19_A	472	Non-Covalent Complex Between Dahp Synthase And Chor		5e-37
3rzi_A	462	The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-		5e-37
3kgf_A	464	The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-		6e-37
2b7o_A	464	The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-		2e-31

>pdb|2W19|A Chain A, Non-Covalent Complex Between Dahp Synthase And Chorismate Mutase From Mycobacterium Tuberculosis Length = 472

Iteration: 1
 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 73  VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQG 132
           +D+  +K A Q P +P  + L ++   L+  PP+                  G+AFLLQG
Sbjct: 36  LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 94
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
           GDCAE+F +    +IR   R LLQM VVL +G  MPVVKV R+AGQ+AKPRS    + + 
Sbjct: 95  GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRS---ADIDA 151
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
           + L SYRGD +NG A D  +R  DP RL+RAY  ++A +NL+RA  + G A++  V  WN
Sbjct: 152 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 211
Query: 253 LDFT 256
            +F 
Sbjct: 212 REFV 215

>pdb|3RZI|A Chain A, The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis Cocrystallized And Complexed With Phenylalanine And Tryptophan Length = 462

Iteration: 1
 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 73  VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQG 132
           +D+  +K A Q P +P  + L ++   L+  PP+                  G+AFLLQG
Sbjct: 26  LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 84
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
           GDCAE+F +    +IR   R LLQM VVL +G  MPVVKV R+AGQ+AKPRS    + + 
Sbjct: 85  GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRS---ADIDA 141
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
           + L SYRGD +NG A D  +R  DP RL+RAY  ++A +NL+RA  + G A++  V  WN
Sbjct: 142 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 201
Query: 253 LDFT 256
            +F 
Sbjct: 202 REFV 205

>pdb|3KGF|A Chain A, The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis Complexed With Phenylalanine And Tryptophan Length = 464

Iteration: 1
 Score =  150 bits (379), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 73  VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQG 132
           +D+  +K A Q P +P  + L ++   L+  PP+                  G+AFLLQG
Sbjct: 28  LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 86
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
           GDCAE+F +    +IR   R LLQM VVL +G  MPVVKV R+AGQ+AKPRS    + + 
Sbjct: 87  GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRS---ADIDA 143
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
           + L SYRGD +NG A D  +R  DP RL+RAY  ++A +NL+RA  + G A++  V  WN
Sbjct: 144 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 203
Query: 253 LDFT 256
            +F 
Sbjct: 204 REFV 207

>pdb|2B7O|A Chain A, The Structure Of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase From Mycobacterium Tuberculosis Length = 464

Iteration: 1
 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 104/184 (56%), Gaps = 4/184 (2%)
Query: 73  VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGXXXXXXXXXXXXXMGKAFLLQG 132
           +D+  +K A Q P +P  + L +    L+  PP+                  G+AFLLQG
Sbjct: 28  LDAALAKPAAQQPTWPADQAL-AXRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 86
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
           GDCAE+F +    +IR   R LLQ  VVL +G   PVVKV R+AGQ+AKPRS    + + 
Sbjct: 87  GDCAETFXDNTEPHIRGNVRALLQXAVVLTYGASXPVVKVARIAGQYAKPRS---ADIDA 143
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
           + L SYRGD +NG A D  +R  DP RL+RAY  ++A  NL+RA  + G A++  V  WN
Sbjct: 144 LGLRSYRGDXINGFAPDAAAREHDPSRLVRAYANASAAXNLVRALTSSGLASLHLVHDWN 203
Query: 253 LDFT 256
            +F 
Sbjct: 204 REFV 207
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	258
3rzi_A	462	Probable 3-deoxy-D-arabino-heptulosonate 7-phosph	4e-72

>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A* Length = 462

 Score =  226 bits (578), Expect = 4e-72
 Identities = 84/192 (43%), Positives = 116/192 (60%), Gaps = 4/192 (2%)

Query: 67  GPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGK 126
              +  +D+  +K A Q P +P  + L  +   L+  PP+    E   L+E+LA+ A G+
Sbjct: 20  TDLRTRLDAALAKPAAQQPTWPADQALA-MRTVLESVPPVTVPSEIVRLQEQLAQVAKGE 78

Query: 127 AFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDP 186
           AFLLQGGDCAE+F +    +IR   R LLQM VVL +G  MPVVKV R+AGQ+AKPRS  
Sbjct: 79  AFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSAD 138

Query: 187 FEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQ 246
               + + L SYRGD +NG A D  +R  DP RL+RAY  ++A +NL+RA  + G A++ 
Sbjct: 139 I---DALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLH 195

Query: 247 RVTQWNLDFTEH 258
            V  WN +F   
Sbjct: 196 LVHDWNREFVRT 207

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	258
3rzi_A	462	Probable 3-deoxy-D-arabino-heptulosonate 7-phosph	100.0

>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*

Probab=100.00  E-value=3e-84  Score=620.18  Aligned_cols=181  Identities=46%  Similarity=0.785  Sum_probs=179.4

Q ss_pred             ccccccCccccCCCCCCHHHHHHHHHHhccCCCccCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhhcchhhHHHHHH
Q 043430           73 VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFR  152 (258)
Q Consensus        73 ~~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~a~Ei~~Lr~~La~vA~G~AFlLQgGDCAEsF~e~~~~~I~~k~~  152 (258)
                      ++||+++|++|||.|| +++|+.|+++|+++|||||++||++||++||+||+|+|||||||||||+|+||++++|++|++
T Consensus        26 ~~sWr~~pa~QqP~yp-~~~l~~v~~~L~~~PPLV~a~Ei~~Lr~~La~va~G~AFlLQGGDCAEsF~~~~~~~ir~k~~  104 (462)
T 3rzi_A           26 LDAALAKPAAQQPTWP-ADQALAMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVR  104 (462)
T ss_dssp             HHHHHTSCCTTCCCCC-HHHHHHHHHHHTTSCCSSCHHHHHHHHHHHHHHHTTSCEEEEEECSSCCSTTCCHHHHHHHHH
T ss_pred             ccchhhCCcccCCCCC-HHHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHHCCCEEEEeCccccCChhhcChHHHHHHHH
Confidence            4799999999999999 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCceEEeeccccCCCCCCCCchhhcCCeecccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 043430          153 ILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLN  232 (258)
Q Consensus       153 ~Llqma~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~v~G~~LPsYRGD~VNg~~f~~~aR~PDP~RLl~aY~~SaatLn  232 (258)
                      +|+|||+||+|++++|||||||||||||||||+++|   |++|||||||||||.+||+++|+|||+|||+||+||++|||
T Consensus       105 ~llqMa~vLt~g~~~PVVkvGRiAGQfAKPRSs~~E---Gv~LPsYRGD~VNg~~f~~~aR~PDP~Rll~aY~~SaatlN  181 (462)
T 3rzi_A          105 ALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADID---ALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMN  181 (462)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECSCCCCCCCSCSBC---TTSSBCCCCTTTSCSSSSHHHHSCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCCeEEecccccccCCCCCCCcC---CCcccccCCccccCCCCChhhcCCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999   99999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccccccccccccchhhhc
Q 043430          233 LLRAFATGGYAAMQRVTQWNLDFTE  257 (258)
Q Consensus       233 ~lRa~~~gG~Adl~~~~~W~l~fv~  257 (258)
                      +||+|++|||||||++++||++||+
T Consensus       182 llRa~~~gG~Adl~~~~~W~~~fv~  206 (462)
T 3rzi_A          182 LVRALTSSGLASLHLVHDWNREFVR  206 (462)
T ss_dssp             HHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred             HHHHhccCChhhhhccccchhhhcc
Confidence            9999999999999999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	258
d2b7oa1	462	c.1.10.8 (A:1-462) Probable DAHP synthetase AroG,	7e-92

>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG, phenylalanine-repressible {Mycobacterium tuberculosis [TaxId: 1773]} Length = 462

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class-II DAHP synthetase
domain: Probable DAHP synthetase AroG, phenylalanine-repressible
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  276 bits (708), Expect = 7e-92
 Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 6/211 (2%)

Query: 50  VKTTTKAPEPVLKTSNVGPQ--KWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIV 107
           +  T   P   L +    P   +  +D+  +K A Q P +P  + L  +   L+  PP+ 
Sbjct: 1   MNWTVDIPIDQLPSLPPLPTDLRTRLDAALAKPAAQQPTWPADQALA-MRTVLESVPPVT 59

Query: 108 FAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQM 167
              E   L+E+LA+ A G+AFLLQGGDCAE+F +    +IR   R LLQM VVL +G  M
Sbjct: 60  VPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASM 119

Query: 168 PVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQS 227
           PVVKV R+AGQ+AKPRS      + + L SYRGD +NG A D  +R  DP RL+RAY  +
Sbjct: 120 PVVKVARIAGQYAKPRSADI---DALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANA 176

Query: 228 AATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
           +A +NL+RA  + G A++  V  WN +F   
Sbjct: 177 SAAMNLVRALTSSGLASLHLVHDWNREFVRT 207

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	258
d2b7oa1	462	Probable DAHP synthetase AroG, phenylalanine-repre	100.0

>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG, phenylalanine-repressible {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class-II DAHP synthetase
domain: Probable DAHP synthetase AroG, phenylalanine-repressible
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.7e-83  Score=611.22  Aligned_cols=184  Identities=46%  Similarity=0.781  Sum_probs=180.0

Q ss_pred             CCCccccccCccccCCCCCCHHHHHHHHHHhccCCCccCHHHHHHHHHHHHHHhCCCeeEEecCCccchhhhcchhhHHH
Q 043430           70 KWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRD  149 (258)
Q Consensus        70 ~Ws~~sWr~~pa~QqP~ypD~~~L~~v~~~L~~~PPLV~a~Ei~~Lr~~La~vA~G~AFlLQgGDCAEsF~e~~~~~I~~  149 (258)
                      .|.+++|+++||+|||.|||+..| +|+++|+++|||||++||++||++||+||+|+|||||||||||+|+||++++|++
T Consensus        23 ~~~~~~~~~~Pa~QqP~ypd~~~l-~v~~~L~~~PPLV~a~Ei~~Lk~~La~va~G~AFlLQgGDCAEsF~~~~~~~Ir~  101 (462)
T d2b7oa1          23 RTRLDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCAETFMDNTEPHIRG  101 (462)
T ss_dssp             HHHHHHHHTSCCTTCCCCCHHHHH-HHHHHHTSSCCSSCHHHHHHHHHHHHHHHTTSCEEEEEECSSCCSTTCSHHHHHH
T ss_pred             hhhhhhhhcCccccCCCCCCHHHH-HHHHHHhcCCCcCCHHHHHHHHHHHHHHhCCCEEEEECcccccChhhcChHHHHH
Confidence            378889999999999999999998 5999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCceEEeeccccCCCCCCCCchhhcCCeecccccCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 043430          150 TFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAA  229 (258)
Q Consensus       150 k~~~Llqma~vL~~g~~~PVVkVGRiAGQfAKPRS~~~E~v~G~~LPsYRGD~VNg~~f~~~aR~PDP~RLl~aY~~Saa  229 (258)
                      |+++|+|||.||++++++|||||||||||||||||+++   ||++||||||||||+.+|++++|+|||+|||+||+||++
T Consensus       102 k~k~llqMa~vL~~~~~~PVVkVGRiAGQyAKPRS~~~---dgv~LpsYRGDiVN~~~f~~~aR~PDP~Rll~aY~~Saa  178 (462)
T d2b7oa1         102 NVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADI---DALGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASA  178 (462)
T ss_dssp             HHHHHHHHHHHHHHHHTSCEEEEEECSSCCCCCCSCSB---CTTSSBCCCCTTTSCSSSSHHHHSCCTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCCCEEEeccchhcccCCccCcc---cccccccccCCcccCCCCChhccCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999986   689999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccccccccccccchhhhc
Q 043430          230 TLNLLRAFATGGYAAMQRVTQWNLDFTE  257 (258)
Q Consensus       230 tLn~lRa~~~gG~Adl~~~~~W~l~fv~  257 (258)
                      |||+||+|..|||||||++++||++|++
T Consensus       179 tLNllRa~~~gg~AdL~~v~~Wn~~f~~  206 (462)
T d2b7oa1         179 AMNLVRALTSSGLASLHLVHDWNREFVR  206 (462)
T ss_dssp             HHHHHHHHHTSTTSCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhccCccchhhhhhccccccc
Confidence            9999999999999999999999999986