Citrus Sinensis ID: 043543
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 381 | ||||||
| 255552394 | 411 | conserved hypothetical protein [Ricinus | 0.994 | 0.922 | 0.841 | 0.0 | |
| 225431485 | 451 | PREDICTED: DUF246 domain-containing prot | 0.994 | 0.840 | 0.823 | 0.0 | |
| 224131156 | 401 | predicted protein [Populus trichocarpa] | 1.0 | 0.950 | 0.824 | 0.0 | |
| 296088556 | 499 | unnamed protein product [Vitis vinifera] | 0.994 | 0.759 | 0.823 | 0.0 | |
| 356516352 | 510 | PREDICTED: DUF246 domain-containing prot | 0.997 | 0.745 | 0.821 | 0.0 | |
| 356507475 | 509 | PREDICTED: DUF246 domain-containing prot | 0.997 | 0.746 | 0.821 | 0.0 | |
| 297794049 | 521 | hypothetical protein ARALYDRAFT_496672 [ | 0.994 | 0.727 | 0.778 | 1e-178 | |
| 18700109 | 391 | AT5g64600/MUB3_12 [Arabidopsis thaliana] | 0.994 | 0.969 | 0.775 | 1e-178 | |
| 42568771 | 522 | O-fucosyltransferase family protein [Ara | 0.994 | 0.726 | 0.775 | 1e-177 | |
| 10178063 | 539 | auxin-independent growth promoter-like p | 0.994 | 0.703 | 0.775 | 1e-177 |
| >gi|255552394|ref|XP_002517241.1| conserved hypothetical protein [Ricinus communis] gi|223543612|gb|EEF45141.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/379 (84%), Positives = 351/379 (92%)
Query: 1 MVAVAHIMNATLVIPQLDKRSFWKDSSTFSDMFDEVHFIKTLRGDLRIAKELPKELESVP 60
MVAVAHIMNATLVIPQLDKRSFW+DSSTF D+FDE+HFI +L+ D+RI KELPKELES+P
Sbjct: 29 MVAVAHIMNATLVIPQLDKRSFWQDSSTFPDIFDELHFITSLQNDVRIVKELPKELESLP 88
Query: 61 RARKHFTSWSGVGYYEEMTQLFKEYQVIHVAKSDSRLANNDLPLDIQRLRCRALYYALRF 120
RARKHFTSWSG+GYYEEMT+L+KE+QVIHV KSDSRL+NNDLPLDIQRLRCRALY+ALRF
Sbjct: 89 RARKHFTSWSGMGYYEEMTRLWKEFQVIHVPKSDSRLSNNDLPLDIQRLRCRALYHALRF 148
Query: 121 SPPIEILGEKLVERLRSLGGRYIALHLRYEKDMLSFTGCTYGLTDAESKELTIMRENTNH 180
SPPIE LG+ LV RL S GGRYIALHLRYEKDMLSFTGC YGLT+AES+EL +MRE+TNH
Sbjct: 149 SPPIESLGKTLVGRLISRGGRYIALHLRYEKDMLSFTGCNYGLTEAESEELRLMRESTNH 208
Query: 181 WKVKKINSTEQRIGGYCPLTPKEVGIFLQALGYPPSTIIYIAAGEIYGGNTHLSELMYRF 240
WKVKKINSTEQR G+CPLTPKEVGIFLQALGY PS IIYIAAGEIYGG +HL ELM RF
Sbjct: 209 WKVKKINSTEQREAGFCPLTPKEVGIFLQALGYSPSMIIYIAAGEIYGGESHLLELMARF 268
Query: 241 PNLVFKETLATKEELKAFANHASQTAALDYLISVESDVFIPSHSGNMARAVEGHRRFLGH 300
PN VFKETLAT EELKAFA HASQTAALDY+ISVESDVF+PSHSGNMARAVEGHRRFLGH
Sbjct: 269 PNTVFKETLATPEELKAFAKHASQTAALDYIISVESDVFVPSHSGNMARAVEGHRRFLGH 328
Query: 301 RKTITPDRRGLVELFDKLKSGKLREGPSFSQRVQQIHENWQGGPRKRKGPLPGIKGRARF 360
RKTITP+RRGLV+LFDKL+SG+++EGP+FS VQ++H+N QG PRKRKGPLPGIKGRAR
Sbjct: 329 RKTITPERRGLVKLFDKLESGQMKEGPTFSNIVQEMHKNRQGAPRKRKGPLPGIKGRARL 388
Query: 361 RTEESFYENPYPECICSSK 379
RTEESFYENPYPECIC SK
Sbjct: 389 RTEESFYENPYPECICRSK 407
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431485|ref|XP_002274676.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224131156|ref|XP_002328468.1| predicted protein [Populus trichocarpa] gi|222838183|gb|EEE76548.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|296088556|emb|CBI37547.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356516352|ref|XP_003526859.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356507475|ref|XP_003522491.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297794049|ref|XP_002864909.1| hypothetical protein ARALYDRAFT_496672 [Arabidopsis lyrata subsp. lyrata] gi|297310744|gb|EFH41168.1| hypothetical protein ARALYDRAFT_496672 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18700109|gb|AAL77666.1| AT5g64600/MUB3_12 [Arabidopsis thaliana] gi|21464583|gb|AAM52246.1| AT5g64600/MUB3_12 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|42568771|ref|NP_201265.3| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|332010542|gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|10178063|dbj|BAB11427.1| auxin-independent growth promoter-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 381 | ||||||
| TAIR|locus:2174754 | 522 | AT5G64600 [Arabidopsis thalian | 0.994 | 0.726 | 0.693 | 4.9e-140 | |
| TAIR|locus:2009467 | 565 | AT1G22460 [Arabidopsis thalian | 0.984 | 0.663 | 0.527 | 1.4e-103 | |
| TAIR|locus:2157096 | 652 | AT5G35570 [Arabidopsis thalian | 0.965 | 0.564 | 0.444 | 3.7e-80 | |
| TAIR|locus:2065563 | 638 | AT2G37980 [Arabidopsis thalian | 0.963 | 0.575 | 0.451 | 1.2e-79 | |
| TAIR|locus:2080285 | 638 | AT3G54100 [Arabidopsis thalian | 0.965 | 0.576 | 0.439 | 1.6e-77 | |
| TAIR|locus:2150129 | 631 | FRB1 "FRIABLE 1" [Arabidopsis | 0.976 | 0.589 | 0.432 | 5.5e-77 | |
| TAIR|locus:2014869 | 499 | AT1G14020 [Arabidopsis thalian | 0.960 | 0.733 | 0.430 | 5.1e-74 | |
| TAIR|locus:2076552 | 512 | AT3G02250 [Arabidopsis thalian | 0.960 | 0.714 | 0.431 | 1.2e-72 | |
| TAIR|locus:2056981 | 508 | AT2G03280 [Arabidopsis thalian | 0.950 | 0.712 | 0.415 | 1.8e-72 | |
| TAIR|locus:2143181 | 508 | AT5G15740 [Arabidopsis thalian | 0.960 | 0.720 | 0.426 | 2.3e-71 |
| TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 263/379 (69%), Positives = 303/379 (79%)
Query: 1 MVAVAHIMNATLVIPQLDKRSFWKDSSTFSDMFDEVHFIKTLRGDLRIAKELPKELESVP 60
+VAVAHIMNATLVIP+LDKRSFW+DSS FSD+FDE FIK+LR D+++ K+LPKE+ES+P
Sbjct: 139 IVAVAHIMNATLVIPELDKRSFWQDSSVFSDIFDEEQFIKSLRRDVKVIKKLPKEVESLP 198
Query: 61 RARKHFTSWSGVGYYEEMTQLFKEYQVIHVAKSDSRLANNDLPLDIQXXXXXXXXXXXXF 120
RARKHFTSWS VGYYEEMT L+KEY+VIHVAKSDSRLANNDLP+D+Q F
Sbjct: 199 RARKHFTSWSSVGYYEEMTHLWKEYKVIHVAKSDSRLANNDLPIDVQRLRCRVLYRGLCF 258
Query: 121 SPPIEILGEKLVERLRSLGGRYIALHLRYEKDMLSFTGCTYGLTDAESKELTIMRENTNH 180
SP IE LG+KLVERL+S GRYIALHLRYEKDML+FTGCTYGLTDAES+EL +MRE+T+H
Sbjct: 259 SPAIESLGQKLVERLKSRAGRYIALHLRYEKDMLAFTGCTYGLTDAESEELRVMRESTSH 318
Query: 181 WKVKKINSTEQRIGGYCPLTPKEVGIFLQALGYPPSTXXXXXXXXXXXXNTHLSELMYRF 240
WK+K INSTEQR G CPLTPKEVGIFL+ LGY ST + LSEL RF
Sbjct: 319 WKIKSINSTEQREEGLCPLTPKEVGIFLKGLGYSQSTVIYIAAGEIYGGDDRLSELKSRF 378
Query: 241 PNLVFKETLATKEELKAFANHASQTAALDYLISVESDVFIPSHSGNMARAVEGHRRFLGH 300
PNLVFKETLA EELK F HA++TAALDY+ISVESDVF+PSHSGNMARAVEGHRRFLGH
Sbjct: 379 PNLVFKETLAGNEELKGFTGHATKTAALDYIISVESDVFVPSHSGNMARAVEGHRRFLGH 438
Query: 301 RKTITPDRRGLVELFDKLKSGKLREGPSFSQRVQQIHENWQXXXXXXXXXXXXXXXXARF 360
R+TITPDR+GLV+LF K++ G+L+EGP S V Q+H++ Q ARF
Sbjct: 439 RRTITPDRKGLVKLFVKMERGQLKEGPKLSNFVNQMHKDRQGAPRRRKGPTQGIKGRARF 498
Query: 361 RTEESFYENPYPECICSSK 379
RTEE+FYENPYPECICSSK
Sbjct: 499 RTEEAFYENPYPECICSSK 517
|
|
| TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2056981 AT2G03280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00034821001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (432 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 381 | |||
| cd11299 | 290 | cd11299, O-FucT_plant, GDP-fucose protein O-fucosy | 1e-141 | |
| pfam10250 | 315 | pfam10250, O-FucT, GDP-fucose protein O-fucosyltra | 1e-109 | |
| cd11296 | 206 | cd11296, O-FucT_like, GDP-fucose protein O-fucosyl | 6e-12 |
| >gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily | Back alignment and domain information |
|---|
Score = 403 bits (1037), Expect = e-141
Identities = 161/306 (52%), Positives = 204/306 (66%), Gaps = 38/306 (12%)
Query: 1 MVAVAHIMNATLVIPQLDKRSFWKDSSTFSDMFDEVHFIKTLRGDLRIAKELPKELESVP 60
VAVA ++NATLV+P+LDK S W DSS F D++D HFIK+L+ D+R+ K+LP+EL S
Sbjct: 20 AVAVARLLNATLVLPELDKNSVWGDSSKFGDIYDVDHFIKSLKDDVRVVKKLPEELASKK 79
Query: 61 RAR--KHFTSWSGVGYY-EEMTQLFKEYQVIHVAKSDSRLANNDLPLDIQRLRCRALYYA 117
K S S YY EE+ L K++ VI +A DSRLAN+ LP +IQRLRCR ++A
Sbjct: 80 PEITVKRVPSRSSPSYYLEEVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLRCRVNFHA 139
Query: 118 LRFSPPIEILGEKLVERLRSLGGRYIALHLRYEKDMLSFTGCTYGLTDAESKELTIMREN 177
LRF P IE LG+KLV+RLR GG ++ALHLR+EKDML+F+GC
Sbjct: 140 LRFVPEIEELGDKLVDRLREAGGPFLALHLRFEKDMLAFSGC------------------ 181
Query: 178 TNHWKVKKINSTEQRIGGYCPLTPKEVGIFLQALGYPPSTIIYIAAGEIYGGNTHLSELM 237
G CPLTP+EVG+ L+ALG+P ST IY+AAGEIYGG L L
Sbjct: 182 -----------------GKCPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLR 224
Query: 238 YRFPNLVFKETLATKEELKAFANHASQTAALDYLISVESDVFIPSHSGNMARAVEGHRRF 297
FPNL KETLAT EEL F+ H+S+ AALDY++ +ESDVF+P++ GN A+AV GHRR+
Sbjct: 225 SIFPNLYTKETLATAEELAPFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRRY 284
Query: 298 LGHRKT 303
LGHRKT
Sbjct: 285 LGHRKT 290
|
Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290 |
| >gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 100.0 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 94.51 | |
| KOG3849 | 386 | consensus GDP-fucose protein O-fucosyltransferase | 90.93 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-53 Score=413.70 Aligned_cols=282 Identities=40% Similarity=0.633 Sum_probs=194.9
Q ss_pred CEeeeecccceEeccccCCCCccCCCCC-----CCCCcChHHHHHhccCCeEEeccCChhhcCCcc--------------
Q 043543 1 MVAVAHIMNATLVIPQLDKRSFWKDSST-----FSDMFDEVHFIKTLRGDLRIAKELPKELESVPR-------------- 61 (381)
Q Consensus 1 aV~vAR~LNATLVlP~l~~~s~w~D~S~-----F~dIfD~d~Fi~~L~~dVrIvk~LP~~~~~~~~-------------- 61 (381)
||++|++||+|||||.+...+.|++.++ |+++||+++|++.++.+|.+.+.+|..+.....
T Consensus 20 a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~~~~~~~~~~~~~~~~~~~~~~~ 99 (351)
T PF10250_consen 20 AVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLPKHWDEVFRLQYCWSPWESGSWD 99 (351)
T ss_dssp HHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-HHHHTTTS--EE-HHHHHHHHS-GGG-EEEESS-B------
T ss_pred HHHHHHHhCCEEEcCCccccccccccccccccChhhhccHHHHHHHhhCceehheeccchhccccchhhcccccccccch
Confidence 5789999999999999999999999988 999999999999999999999999876654211
Q ss_pred -----------------ccccccc-cccchhh-HHhHHHhhhc------cEEEEeecCCccccCCCChhHHHHhhhhhcc
Q 043543 62 -----------------ARKHFTS-WSGVGYY-EEMTQLFKEY------QVIHVAKSDSRLANNDLPLDIQRLRCRALYY 116 (381)
Q Consensus 62 -----------------~~~~p~~-~s~~~yy-~~ilp~l~k~------~Vi~l~~~~~rla~~~lp~~iq~LRCr~nf~ 116 (381)
....+.. |+...+| ++++|.+.++ +|+.|.++...+..+.++.++|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~r-------- 171 (351)
T PF10250_consen 100 DNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDNYLDRDLQR-------- 171 (351)
T ss_dssp --TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--GGGGGGGG--------
T ss_pred hhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhcccCccceE--------
Confidence 1112223 7888888 7799999987 99999999999998888999987
Q ss_pred cccccchHHHHHHHHHHHHHhcCCCeEEEeccchhhhHhhhcCCCCCChhHHHHHHHHHhhccccccccCCchhhhcCCC
Q 043543 117 ALRFSPPIEILGEKLVERLRSLGGRYIALHLRYEKDMLSFTGCTYGLTDAESKELTIMRENTNHWKVKKINSTEQRIGGY 196 (381)
Q Consensus 117 ALrF~p~I~~lg~~lV~Rlr~~g~pfiAlHLR~E~Dmla~sgC~~g~~~~e~~eL~~~R~~~~~w~~k~i~~~~~R~~G~ 196 (381)
+|+|+++|+++|++++++|...++||||+|||+|+|| +++|.+++ +...|+.+|. |..+.+++...+..+.
T Consensus 172 ~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~--~~~C~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~ 242 (351)
T PF10250_consen 172 YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDW--FSACEFKG---ERHLLASPRC----WGKKSINPEKKRRNGC 242 (351)
T ss_dssp G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHH--HHHHCT-T-------TTTHHH----H-GGGTT-----HHHH
T ss_pred EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCch--HhhcccCC---chHHHHHhHh----hccccccchhhhhcCC
Confidence 9999999999999999999955569999999999999 88999955 7777887775 2445577778899999
Q ss_pred CCCCHHHHHHHHHHhCCCCCcEEEEeeccccCCcccchHHHHhCCCcccccccCCHHHHHHHHhhhhhhhhhhheecccC
Q 043543 197 CPLTPKEVGIFLQALGYPPSTIIYIAAGEIYGGNTHLSELMYRFPNLVFKETLATKEELKAFANHASQTAALDYLISVES 276 (381)
Q Consensus 197 CPLtPeEvgl~LralGf~~~T~IYlA~g~iygg~~~l~~L~~~fP~l~tKe~L~~~~eL~~f~~~s~~~aAlDy~V~~~S 276 (381)
||++|++++.+++++|+.+.|.||||+++++||.+.|++|++.||++++|+++.+.+|+++|.+ .++|+||++||++|
T Consensus 243 ~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s 320 (351)
T PF10250_consen 243 CPSTPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRS 320 (351)
T ss_dssp S--HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHS
T ss_pred CCChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999966 99999999999999
Q ss_pred ceeeeCCCCchhHhHhHhhhhcCCC
Q 043543 277 DVFIPSHSGNMARAVEGHRRFLGHR 301 (381)
Q Consensus 277 DvFv~t~~Gnf~~~v~GhR~y~G~~ 301 (381)
|+||+|..++|+.+|+++|.|.|+.
T Consensus 321 ~~Figt~~Stfs~~i~~~R~~~g~~ 345 (351)
T PF10250_consen 321 DVFIGTCGSTFSSNIARERHYRGKP 345 (351)
T ss_dssp SEEEE-TT-HHHHHHHHHHHHSSSS
T ss_pred CEEEecCcchhHHHhhcccCcCCCC
Confidence 9999999999999999999999965
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 381 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 3e-06
Identities = 61/457 (13%), Positives = 121/457 (26%), Gaps = 124/457 (27%)
Query: 2 VAVAHIMNATLVIPQLDKRSFWKDSSTFSDMFDEVHFIKTLRGDLRIAKELPKELESVPR 61
+ + V ++D + FW + + + ++ L +I +
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL--YQIDPNWTSRSDHSSN 222
Query: 62 ARKHFTSWSGVGYYEEMTQLF--KEYQ---VI--HVAKSDSRLANNDLPLDIQRLRCRAL 114
+ S E+ +L K Y+ ++ +V +++ N ++ C+ L
Sbjct: 223 IKLRIHSI-----QAELRRLLKSKPYENCLLVLLNV--QNAKAWN---AFNLS---CKIL 269
Query: 115 YYALRFSPPIEILGEKLVERLRSLGGRYIALHLRYEKDMLSFTGCTYGLTDAESKEL--- 171
RF + L H+ + + LT E K L
Sbjct: 270 LTT-RFKQVTDFLSAATTT------------HISLDHHSM-------TLTPDEVKSLLLK 309
Query: 172 -------------------------TIMRENTNHWK------VKKINSTEQRIGGYCPLT 200
+R+ W K+ + + L
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES--SLNVLE 367
Query: 201 PKEVGIFLQALG-YPPSTIIYIAAGEIYGGNT--------------------HLSELMYR 239
P E L +PPS I + + E
Sbjct: 368 PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427
Query: 240 FPNLVFKETLATKEEL---KAFANHASQTAALDY--LISVESDVFIPSHSG-NMARAVEG 293
P++ + + + E ++ +H + D LI D + SH G ++
Sbjct: 428 IPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487
Query: 294 HR-----------RFLG----HRKTITPDRRGLVELFDKLKSGK---LREGPSFSQRVQQ 335
R RFL H T ++ +LK K P + + V
Sbjct: 488 ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA 547
Query: 336 IHENWQG-GPRKRKGPLPGIKGRARFRTEESFYENPY 371
I + + A +E+ +E +
Sbjct: 548 ILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAH 584
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.35 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.57 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 96.83 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 95.14 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4.5e-12 Score=126.50 Aligned_cols=166 Identities=16% Similarity=0.157 Sum_probs=108.2
Q ss_pred ccccccchHHHHHHHHHHHHHhcCCCeEEEeccchhhhHhhhcCCCCCChhHHHHHHHHHhhccccccccCCchhhhcCC
Q 043543 116 YALRFSPPIEILGEKLVERLRSLGGRYIALHLRYEKDMLSFTGCTYGLTDAESKELTIMRENTNHWKVKKINSTEQRIGG 195 (381)
Q Consensus 116 ~ALrF~p~I~~lg~~lV~Rlr~~g~pfiAlHLR~E~Dmla~sgC~~g~~~~e~~eL~~~R~~~~~w~~k~i~~~~~R~~G 195 (381)
..|+|++.|.++|+..++..-. .+|+++|+|...|+... |.......- --+.--||+..+.. .-...
T Consensus 217 r~l~~s~~l~~~a~~fi~~~L~--~~~~~~h~r~~~dw~~~--~~~~~~~~~------~~y~~~H~Rr~d~~---~~~~~ 283 (408)
T 4ap5_A 217 RSMVFARHLREVGDEFRSRHLN--STDDADRIPFQEDWMKM--KVKLGSALG------GPYLGVHLRRKDFI---WGHRQ 283 (408)
T ss_dssp HTCCBCHHHHHHHHHHHHHHHC--CCTTTTTCCCCSSGGGC--CCCTTCBCC------EEEEEEEECCTTTT---TTTCS
T ss_pred HHhhhhHHHHHHHHHHHHHHhC--cccceeecccchhHhhh--hcccccccC------CCccccccccccch---hhhhc
Confidence 4799999999999998886553 48888999888888764 443211000 00111233322110 00122
Q ss_pred CCCCCHHHHHHHHHHhCCCCCcEEEEeeccccCCcccchHHHHhCCCcccccccCCHHHHHHHHhhhhhhhhhhheeccc
Q 043543 196 YCPLTPKEVGIFLQALGYPPSTIIYIAAGEIYGGNTHLSELMYRFPNLVFKETLATKEELKAFANHASQTAALDYLISVE 275 (381)
Q Consensus 196 ~CPLtPeEvgl~LralGf~~~T~IYlA~g~iygg~~~l~~L~~~fP~l~tKe~L~~~~eL~~f~~~s~~~aAlDy~V~~~ 275 (381)
.+|-.++-+..+.+.+.=-+-+.||||+-+ .++.+..|++.+|.++.-.. ..+++..+ .....|.||-+||.+
T Consensus 284 ~~ps~~~~~~~i~~~~~~~~~~~VyiATD~---~~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~ 356 (408)
T 4ap5_A 284 DVPSLEGAVRKIRSLMKTHRLDKVFVATDA---VRKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAH 356 (408)
T ss_dssp SSCCHHHHHHHHHHHHHHHTCSCEEEEECC---CHHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHhcCCCEEEEeCCC---chhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHh
Confidence 334333333333333322244579999865 24446789999998754322 34566666 345779999999999
Q ss_pred CceeeeCCCCchhHhHhHhhhhcCCC
Q 043543 276 SDVFIPSHSGNMARAVEGHRRFLGHR 301 (381)
Q Consensus 276 SDvFv~t~~Gnf~~~v~GhR~y~G~~ 301 (381)
||+||+|..++|+..|.-.|.+.|+.
T Consensus 357 a~~FiGt~~StfS~~I~~eR~~~G~~ 382 (408)
T 4ap5_A 357 ARFFIGTSVSTFSFRIHEEREILGLD 382 (408)
T ss_dssp EEEEEBCTTCHHHHHHHHHHHHHTBC
T ss_pred CCeeEeCCcCchhHHHHHHHHhcCCC
Confidence 99999999999999999999999976
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00