Citrus Sinensis ID: 043544

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------62
MDSEQRRKRKRVYRPYSRAQYLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVSSLSLLSSNSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKALDDRKPVTSVAGIRNSRYHIQGKNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLPWERHLRA
ccHHHHHHHccccccccEEEEEEcHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccccccccccccccccccccEEcEEEEccEEEEEEEccccccccEEEEEcccccccHHHHHHHccccccccEEccccccccEEEEccccccccccccccHHcccccccccccccccccccccccccEEEEEEEEEcccEEEEEEEccccccccccccEEEEEEccccccccccEEEEEEcccccccEEEcccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccHHHHHHHccccccccEEEEEEEEEcccccccccccccEEEEEEEccccccccEEEccccccccccccccEEEEccccEEEcccccEEEEEEEccccHHHHHHHHccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccHHHHHHHccccccccccccccccc
ccHHHHHHccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccEEEEEEEcccccccccccccHccccccccccEEEccEEEcccEEEEEEccccccccccEEEEcccccccccccccccccccccccEccccccccEEEEcccccccccccccccccccccccccccccccccccccccccHEEEEHEEccccEEEEEEccccccccccccccEEEEEccccccccccEEEEcHHHHHHHHHHccccccHHccccHHHcccEEEEEccccccccccccccEEEEEcccccccccHHHHHccccccccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEcccEEEcccccccccccHHHHHHHHHHHHHcccccEEEEEEEEEcccccEccccccEEEEEEEcccccccccEEEccHHHcccccccccEEEcccccccccccccEEEEEEEEEccHHHHHHHHHccccEEccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHHHHcccccccccHHHHHcc
mdseqrrkrkrvyrpysraqylsGRSVILCLCFLVFLLFlssdrlpirpvsfkpvlSVSSLsllssnsiqdSFRLTFKSFTLKIEERVLFPDHLLLMVSnkvdqtesLDCVYYKLLNDSATRIEEAAdvrmqpvfsvdeydefrwiarcplppvnysaVVDLrlrrdapaenylslmnnnrtetvhFWDKMAYAAVLDGKTAVVFVKglnlrphresdhtlfrcqfglghwekdeGFAFVTEAVAAAQEVVRCLlprsisknpnkakGIRVAVVNvndkalddrkpvtsvagirnsryhiqgknqrlsrdyvsmpsvarihnskshkqrkgggkfELCVCTMLWNQASLIREWIMYHAWLGVErwfiydnnsddGIQKVIEELNLEnynvsrhnwpwiktqeagfshCALTarneckwvgffdvdeffyfprdhrlgllgenSLRSLVANFSSSKTVAEIRTschsfgpsglsshpaqgvtvgytcrlqsperhksivrpdllnssllnVVHHFRLKagyrylnmpeNIAVINHYKYQVWETFRAKFFRRVATYVVDwqenqntgskdrapglgteaieppnwrlqfCEVWDTGLRDfvlstfadpateslpwerhlra
mdseqrrkrkrvyrpysraqylsgRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVSSLSllssnsiqdsFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFrwiarcplppvnySAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNlrphresdhtLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLlprsisknpnkakgiRVAVvnvndkalddrkpvtsvagirnsryhiqgknqrlsRDYVSMPSVARihnskshkqrkgggKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVvdwqenqntgskdrapglgteaieppnwRLQFCEVWDTGLRDFVLSTfadpateslpwerhlra
MDSEQRRKRKRVYRPYSRAQYLSGRSVIlclcflvfllflSSDRLPIRPVSFKPvlsvsslsllssNSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGfafvteavaaaqevvRCLLPRSISKNPNKAKGIRVAVVNVNDKALDDRKPVTSVAGIRNSRYHIQGKNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLPWERHLRA
************YRPYSRAQYLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVSSLSLLSSNSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKALDD***VTSVAGIRNSRYHI********************************GKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCH************QGVTVGYTCRLQSP*RHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQE****************AIEPPNWRLQFCEVWDTGLRDFVLSTFAD**************
***************YSRAQYLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVSSL********************LKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLL***************QPVFSVDEYDEFRWIARCPL*******************************ETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKALDDRKPVTSVAGIRNSRY**************************************LCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLPWE*****
************YRPYSRAQYLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVSSLSLLSSNSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKALDDRKPVTSVAGIRNSRYHIQGKNQRLSRDYVSMPSVARI***********GGKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLPWERHLRA
********RKRVYRPYSRAQYLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVSSLSLL************FKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLM**NRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKALDDRKPVTSVAGIRNSRYHIQGKNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLPWER****
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSEQRRKRKRVYRPYSRAQYLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVSSLSLLSSNSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLNDSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLMNNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGFAFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKALDDRKPVTSVAGIRNSRYHIQGKNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATESLPWERHLRA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query619 2.2.26 [Sep-21-2011]
B9S2H4578 UPF0392 protein RCOM_0530 N/A no 0.920 0.986 0.606 0.0
Q94K98575 UPF0392 protein At1g27200 yes no 0.904 0.973 0.547 0.0
B9SLR1552 UPF0392 protein RCOM_0530 N/A no 0.770 0.864 0.457 1e-128
Q6YRM6584 UPF0392 protein Os08g0121 yes no 0.815 0.864 0.414 1e-123
>sp|B9S2H4|Y232_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0699480 PE=3 SV=1 Back     alignment and function desciption
 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/620 (60%), Positives = 461/620 (74%), Gaps = 50/620 (8%)

Query: 1   MDSEQRRKRKRVYRPYSRAQ-YLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVS 59
           M+SEQRRKRKR+Y+P S +  + S RS+  CL F VFLLF+SSDR PI+ VSF+PVL+V 
Sbjct: 1   MESEQRRKRKRIYKPDSTSNSFFSVRSLTACLSFFVFLLFISSDRSPIKTVSFRPVLNVP 60

Query: 60  SLSLLSS--NSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLN 117
            +SLL +     +DSF    KS  L +E+RVL PDH+LL+VSNKV  +++LDCVY  L N
Sbjct: 61  -VSLLPTPLGLTRDSFDT--KSLPLIVEDRVLLPDHVLLIVSNKVATSQNLDCVYSNLYN 117

Query: 118 DSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLM 177
                   + DV ++P  SV++Y   + I RC LPP NYSA V LR   +A        +
Sbjct: 118 --------SHDVVLKPALSVNQYHRDKSIVRCQLPPNNYSAAVYLRWSWEA-----AEGV 164

Query: 178 NNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGF 237
                 +V  WD++ Y A+LD  T  VFVKGLNLRPH+ESD + FRC FGL  ++KDEG 
Sbjct: 165 AAAAPASVVSWDRVVYEAMLDWNTVAVFVKGLNLRPHKESDSSKFRCHFGLSKFDKDEGI 224

Query: 238 AFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAV--VNVNDKALDDRKPVTSVAGIRN 295
            F TEA+ AAQEV+RCLLPRSI  NP KA+GIRV V  +N  +  +D             
Sbjct: 225 VFTTEAITAAQEVIRCLLPRSIRNNPVKAQGIRVTVSRINAGEDGVD------------- 271

Query: 296 SRYHIQGKNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIM 355
                             +PSVA+++ +KS+++R   GK+ELC CTMLWNQAS + EWI 
Sbjct: 272 ----------------APLPSVAKVYGAKSYEKRSNRGKYELCACTMLWNQASFLHEWIT 315

Query: 356 YHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNE 415
           YHAWLGV+RWFIYDNNSDDGIQ+V++ELNL+NYNV+RH+WPWIK QEAGFSHCAL AR+E
Sbjct: 316 YHAWLGVQRWFIYDNNSDDGIQEVVDELNLQNYNVTRHSWPWIKAQEAGFSHCALRARSE 375

Query: 416 CKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSH 475
           CKW+GFFDVDEFFY PR     +LGENSLR+LVAN+S S T AEIRT CHSFGPSGL+S 
Sbjct: 376 CKWLGFFDVDEFFYLPRHRGQDMLGENSLRTLVANYSDSSTYAEIRTICHSFGPSGLTSA 435

Query: 476 PAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHY 535
           P+QGVTVGYTCRLQ+PERHKSIVRP+LL+++LLNVVHHF+LK GYRYLN+PE+ AV+NHY
Sbjct: 436 PSQGVTVGYTCRLQAPERHKSIVRPELLDTTLLNVVHHFKLKEGYRYLNVPESTAVVNHY 495

Query: 536 KYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGL 595
           KYQVW+TF+AKFFRRV+TYV +WQE+QN GSKDRAPGLGT AIEPP+WRL+FCEVWDTGL
Sbjct: 496 KYQVWDTFKAKFFRRVSTYVANWQEDQNQGSKDRAPGLGTVAIEPPDWRLRFCEVWDTGL 555

Query: 596 RDFVLSTFADPATESLPWER 615
           +DFVL+ FAD A+  LPWER
Sbjct: 556 KDFVLANFADTASGYLPWER 575

Ricinus communis (taxid: 3988)
>sp|Q94K98|Y1720_ARATH UPF0392 protein At1g27200 OS=Arabidopsis thaliana GN=At1g27200 PE=2 SV=2 Back     alignment and function description
>sp|B9SLR1|Y231_RICCO UPF0392 protein RCOM_0530710 OS=Ricinus communis GN=RCOM_0530710 PE=3 SV=1 Back     alignment and function description
>sp|Q6YRM6|Y8219_ORYSJ UPF0392 protein Os08g0121900 OS=Oryza sativa subsp. japonica GN=Os08g0121900 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query619
255558332578 ubiquitin-protein ligase, putative [Rici 0.920 0.986 0.606 0.0
356501958605 PREDICTED: UPF0392 protein RCOM_0530710- 0.938 0.960 0.584 0.0
224102487601 predicted protein [Populus trichocarpa] 0.938 0.966 0.570 0.0
118486328601 unknown [Populus trichocarpa] 0.938 0.966 0.569 0.0
225424813601 PREDICTED: UPF0392 protein RCOM_0530710- 0.936 0.965 0.607 0.0
356497810605 PREDICTED: UPF0392 protein RCOM_0530710- 0.938 0.960 0.586 0.0
449434865598 PREDICTED: UPF0392 protein RCOM_0530710- 0.932 0.964 0.586 0.0
449523650598 PREDICTED: UPF0392 protein RCOM_0530710- 0.932 0.964 0.584 0.0
224110976594 predicted protein [Populus trichocarpa] 0.930 0.969 0.563 0.0
357486357601 hypothetical protein MTR_5g037020 [Medic 0.924 0.951 0.567 0.0
>gi|255558332|ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|325530317|sp|B9S2H4.1|Y232_RICCO RecName: Full=UPF0392 protein RCOM_0530710 gi|223540685|gb|EEF42248.1| ubiquitin-protein ligase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/620 (60%), Positives = 461/620 (74%), Gaps = 50/620 (8%)

Query: 1   MDSEQRRKRKRVYRPYSRAQ-YLSGRSVILCLCFLVFLLFLSSDRLPIRPVSFKPVLSVS 59
           M+SEQRRKRKR+Y+P S +  + S RS+  CL F VFLLF+SSDR PI+ VSF+PVL+V 
Sbjct: 1   MESEQRRKRKRIYKPDSTSNSFFSVRSLTACLSFFVFLLFISSDRSPIKTVSFRPVLNVP 60

Query: 60  SLSLLSS--NSIQDSFRLTFKSFTLKIEERVLFPDHLLLMVSNKVDQTESLDCVYYKLLN 117
            +SLL +     +DSF    KS  L +E+RVL PDH+LL+VSNKV  +++LDCVY  L N
Sbjct: 61  -VSLLPTPLGLTRDSFDT--KSLPLIVEDRVLLPDHVLLIVSNKVATSQNLDCVYSNLYN 117

Query: 118 DSATRIEEAADVRMQPVFSVDEYDEFRWIARCPLPPVNYSAVVDLRLRRDAPAENYLSLM 177
                   + DV ++P  SV++Y   + I RC LPP NYSA V LR   +A        +
Sbjct: 118 --------SHDVVLKPALSVNQYHRDKSIVRCQLPPNNYSAAVYLRWSWEA-----AEGV 164

Query: 178 NNNRTETVHFWDKMAYAAVLDGKTAVVFVKGLNLRPHRESDHTLFRCQFGLGHWEKDEGF 237
                 +V  WD++ Y A+LD  T  VFVKGLNLRPH+ESD + FRC FGL  ++KDEG 
Sbjct: 165 AAAAPASVVSWDRVVYEAMLDWNTVAVFVKGLNLRPHKESDSSKFRCHFGLSKFDKDEGI 224

Query: 238 AFVTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAV--VNVNDKALDDRKPVTSVAGIRN 295
            F TEA+ AAQEV+RCLLPRSI  NP KA+GIRV V  +N  +  +D             
Sbjct: 225 VFTTEAITAAQEVIRCLLPRSIRNNPVKAQGIRVTVSRINAGEDGVD------------- 271

Query: 296 SRYHIQGKNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFELCVCTMLWNQASLIREWIM 355
                             +PSVA+++ +KS+++R   GK+ELC CTMLWNQAS + EWI 
Sbjct: 272 ----------------APLPSVAKVYGAKSYEKRSNRGKYELCACTMLWNQASFLHEWIT 315

Query: 356 YHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNE 415
           YHAWLGV+RWFIYDNNSDDGIQ+V++ELNL+NYNV+RH+WPWIK QEAGFSHCAL AR+E
Sbjct: 316 YHAWLGVQRWFIYDNNSDDGIQEVVDELNLQNYNVTRHSWPWIKAQEAGFSHCALRARSE 375

Query: 416 CKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSH 475
           CKW+GFFDVDEFFY PR     +LGENSLR+LVAN+S S T AEIRT CHSFGPSGL+S 
Sbjct: 376 CKWLGFFDVDEFFYLPRHRGQDMLGENSLRTLVANYSDSSTYAEIRTICHSFGPSGLTSA 435

Query: 476 PAQGVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHY 535
           P+QGVTVGYTCRLQ+PERHKSIVRP+LL+++LLNVVHHF+LK GYRYLN+PE+ AV+NHY
Sbjct: 436 PSQGVTVGYTCRLQAPERHKSIVRPELLDTTLLNVVHHFKLKEGYRYLNVPESTAVVNHY 495

Query: 536 KYQVWETFRAKFFRRVATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGL 595
           KYQVW+TF+AKFFRRV+TYV +WQE+QN GSKDRAPGLGT AIEPP+WRL+FCEVWDTGL
Sbjct: 496 KYQVWDTFKAKFFRRVSTYVANWQEDQNQGSKDRAPGLGTVAIEPPDWRLRFCEVWDTGL 555

Query: 596 RDFVLSTFADPATESLPWER 615
           +DFVL+ FAD A+  LPWER
Sbjct: 556 KDFVLANFADTASGYLPWER 575

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356501958|ref|XP_003519790.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max] Back     alignment and taxonomy information
>gi|224102487|ref|XP_002312696.1| predicted protein [Populus trichocarpa] gi|222852516|gb|EEE90063.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118486328|gb|ABK95005.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225424813|ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356497810|ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max] Back     alignment and taxonomy information
>gi|449434865|ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449523650|ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224110976|ref|XP_002315701.1| predicted protein [Populus trichocarpa] gi|222864741|gb|EEF01872.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357486357|ref|XP_003613466.1| hypothetical protein MTR_5g037020 [Medicago truncatula] gi|355514801|gb|AES96424.1| hypothetical protein MTR_5g037020 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query619
TAIR|locus:2205829575 AT1G27200 [Arabidopsis thalian 0.489 0.526 0.714 1.1e-159
TAIR|locus:2168798583 AT5G40720 "AT5G40720" [Arabido 0.554 0.588 0.514 4.3e-111
TAIR|locus:2086666 913 AT3G27330 [Arabidopsis thalian 0.541 0.366 0.515 8e-110
TAIR|locus:2126392588 AT4G37420 "AT4G37420" [Arabido 0.483 0.508 0.419 6.8e-69
WB|WBGene00019763425 galt-1 [Caenorhabditis elegans 0.350 0.510 0.223 0.00099
TAIR|locus:2205829 AT1G27200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1237 (440.5 bits), Expect = 1.1e-159, Sum P(2) = 1.1e-159
 Identities = 218/305 (71%), Positives = 259/305 (84%)

Query:   313 SMPSVARIHNSKS--HKQRKGGGKFELCVCTMLWNQASLIREWIMYHAWLGVERWFIYDN 370
             ++PSVARI+ S S   K++K G K ELCVCTMLWNQA  +REWIMYH+WLGVERWFIYDN
Sbjct:   267 ALPSVARIYGSDSIEKKEKKSGVKHELCVCTMLWNQAPFLREWIMYHSWLGVERWFIYDN 326

Query:   371 NSDDGIQKVIEELNLENYNVSRHNWPWIKTQEAGFSHCALTARNECKWVGFFDVDEFFYF 430
             NSDDGIQ+ IE L+ ENYNVSRH WPWIKTQEAGFSHCA+ A+ EC WVGFFDVDEF+YF
Sbjct:   327 NSDDGIQEEIELLSSENYNVSRHVWPWIKTQEAGFSHCAVRAKEECNWVGFFDVDEFYYF 386

Query:   431 PRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCRLQS 490
             P     GL  +N+L+SLV+N++S   V EIRT CHS+GPSGL+S P+QGVTVGYTCR  +
Sbjct:   387 PTHRSQGLPSKNALKSLVSNYTSWDLVGEIRTDCHSYGPSGLTSVPSQGVTVGYTCRQAN 446

Query:   491 PERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRR 550
             PERHKSI+RP+LL SSLLN VHHF+LK G  ++++ E++AV+NHYKYQVW+TF+AKF+RR
Sbjct:   447 PERHKSIIRPELLTSSLLNEVHHFQLKEGVGHMSLVESVAVVNHYKYQVWDTFKAKFYRR 506

Query:   551 VATYVVDWQENQNTGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVLSTFADPATES 610
             VATYVVDWQENQN GSKDRAPGLGTEAIEPP+W+ +FCEVWDTGL+D V+S FAD  T  
Sbjct:   507 VATYVVDWQENQNQGSKDRAPGLGTEAIEPPDWKRRFCEVWDTGLKDLVMSNFADQVTGY 566

Query:   611 LPWER 615
             LPW+R
Sbjct:   567 LPWQR 571
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2168798 AT5G40720 "AT5G40720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086666 AT3G27330 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126392 AT4G37420 "AT4G37420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00019763 galt-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B9S2H4Y232_RICCONo assigned EC number0.60640.92080.9861N/Ano
Q6YRM6Y8219_ORYSJNo assigned EC number0.41420.81580.8647yesno
Q94K98Y1720_ARATHNo assigned EC number0.54750.90460.9739yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00081810
SubName- Full=Putative uncharacterized protein; (601 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query619
pfam01697266 pfam01697, Glyco_transf_92, Glycosyltransferase fa 1e-44
pfam1370497 pfam13704, Glyco_tranf_2_4, Glycosyl transferase f 2e-11
>gnl|CDD|216651 pfam01697, Glyco_transf_92, Glycosyltransferase family 92 Back     alignment and domain information 
 Score =  159 bits (404), Expect = 1e-44
 Identities = 64/270 (23%), Positives = 100/270 (37%), Gaps = 28/270 (10%)

Query: 334 KFELCVCTMLWN--QASLIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVS 391
              +CV  +  N  +   ++E+I YH   G   + IY ++  +   KV++E     Y V 
Sbjct: 2   PVVVCVAPLFGNEAKWLQLQEFIEYHKLQGATHFHIYLHSITEYDYKVLKEYEKTGY-VE 60

Query: 392 RHNWP------------WIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLL 439
              WP              + Q A  + C L  +   KW+ F D+DE          G  
Sbjct: 61  LIPWPPGPPYLEPNSNVEWRNQAAAQNDCLLRYKEAAKWIAFLDLDERLVPRNAPTYGEE 120

Query: 440 GENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQGVTVGYTCR-----LQSPERH 494
             + LRSL      S          +SF PS   + P++ VT  Y+CR     L+     
Sbjct: 121 FLDLLRSLPDISIGSYGFRNQWVVKYSFLPSFFENSPSELVTSLYSCRTRETGLEQEWHK 180

Query: 495 KSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQVWETFRAKFFRRVATY 554
           K IVRP+ +NS  ++    F  K G + L++ +   VI HY+ Q                
Sbjct: 181 KCIVRPEKVNSMWIHFPTKFYNKEGNKILHVKKPEGVIRHYRDQEDG--------EDLEK 232

Query: 555 VVDWQENQNTGSKDRAPGLGTEAIEPPNWR 584
           V + QE      +       +  I      
Sbjct: 233 VRNSQEIWKLFLELPKEDFYSTIIWKCYNE 262

Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily. Length = 266
>gnl|CDD|222329 pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 619
PF01697285 Glyco_transf_92: Glycosyltransferase family 92; In 99.94
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 99.76
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 99.55
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 98.67
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 98.42
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 98.39
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 98.37
PRK10063248 putative glycosyl transferase; Provisional 98.31
PRK10073328 putative glycosyl transferase; Provisional 98.29
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 98.27
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 98.23
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 98.21
PRK11204420 N-glycosyltransferase; Provisional 98.19
cd06423180 CESA_like CESA_like is the cellulose synthase supe 98.15
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 98.14
cd06442224 DPM1_like DPM1_like represents putative enzymes si 98.14
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 98.12
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 98.1
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 98.09
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 98.09
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 98.08
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 98.08
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 98.08
cd04188211 DPG_synthase DPG_synthase is involved in protein N 98.07
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 98.05
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 98.04
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 98.02
PRK14583444 hmsR N-glycosyltransferase; Provisional 98.01
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 98.0
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 97.99
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 97.97
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 97.96
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 97.95
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 97.93
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 97.92
cd06438183 EpsO_like EpsO protein participates in the methano 97.9
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 97.87
PRK10018279 putative glycosyl transferase; Provisional 97.83
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 97.78
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 97.77
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 97.75
KOG4735472 consensus Extracellular protein with conserved cys 97.69
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 97.62
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 97.56
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 97.44
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 97.42
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 97.27
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 97.25
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 97.17
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 96.79
COG1216305 Predicted glycosyltransferases [General function p 96.71
COG1215 439 Glycosyltransferases, probably involved in cell wa 96.46
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 96.22
PF06306347 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase ( 96.18
PRK05454 691 glucosyltransferase MdoH; Provisional 95.99
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 95.86
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 95.57
KOG4735472 consensus Extracellular protein with conserved cys 93.94
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 93.87
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 93.6
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 91.58
KOG2977323 consensus Glycosyltransferase [General function pr 91.54
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 90.0
PF03452269 Anp1: Anp1; InterPro: IPR005109 The members of thi 80.55
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function Back     alignment and domain information 
Probab=99.94  E-value=9.1e-27  Score=237.55  Aligned_cols=203  Identities=35%  Similarity=0.642  Sum_probs=151.2

Q ss_pred             ceEEEEEEeecchHH--HHHHHHHHHHhcCccEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCC---------------
Q 043544          334 KFELCVCTMLWNQAS--LIREWIMYHAWLGVERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWP---------------  396 (619)
Q Consensus       334 k~~L~VctIvkNEA~--~L~EWIeyH~alGVD~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp---------------  396 (619)
                      ++.+|+.++.+||++  .|.|||+||+++|+++|+||++++++++.++|+.|.+.|. |++++||               
T Consensus         2 ~~~vCv~pl~~~~~~~~~l~e~ie~~~~~G~~~~~~Y~~~~~~~~~~vL~~Y~~~g~-v~~~~w~~~~~~~~~~~~~~~~   80 (285)
T PF01697_consen    2 DFVVCVSPLFGNEDDWLQLIEWIEYHRLLGVDHFYFYDNSSSPSVRKVLKEYERSGY-VEVIPWPLRPKFPDFPSPFPDP   80 (285)
T ss_pred             cEEEEccchhcccccHHHHHHHHHHHHHhCCCEEEEEEccCCHHHHHhHHHHhhcCe-EEEEEcccccccCCcccchhhh
Confidence            467888889999954  9999999999999999999999999999999999999998 9999997               


Q ss_pred             ----CcchHHHHHHHHHHHccCCCcEEEEeeCCceeecCCCcccCCcccchHHHHHHhcCCCCceeEEEE--EE---EEe
Q 043544          397 ----WIKTQEAGFSHCALTARNECKWVGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRT--SC---HSF  467 (619)
Q Consensus       397 ----~~~~Q~~A~n~Cl~r~~~~adWVlFlDaDEFL~~P~~~g~~~p~~~sL~dlL~~~~~~p~vgaI~v--~w---~~F  467 (619)
                          +...|..+++||++|++..++||+|+|+||||+ |...   .....++.++++.... ..++++.+  .|   ..+
T Consensus        81 ~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE~lv-P~~~---~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~  155 (285)
T PF01697_consen   81 NSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDEFLV-PTNA---PTYPEEFEDLLREFPN-ISAGAYSFRNSWFYKYEF  155 (285)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhceEEEEeccccEEE-eccc---cchhhHHHHHHhhccc-cceEEEEEeEEEEEeccc
Confidence                124689999999999999999999999999995 6652   0111478888888764 23454443  22   235


Q ss_pred             CCCCCccCCCCCeEEeeEeecCCC--------CCceEEEeCCccccccccceeeEEecCCeeEeeeCCceeEEEeeccCC
Q 043544          468 GPSGLSSHPAQGVTVGYTCRLQSP--------ERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPENIAVINHYKYQV  539 (619)
Q Consensus       468 G~sG~~~~P~~gV~~~yt~Rl~~~--------~r~KsIVRp~~V~~slin~VHh~~l~~G~~~~~l~~~~a~InHY~yrS  539 (619)
                      ++++....|.+++...+.++....        .+.|+||||+.+..+++|.+.++....|.....++...+.|+||+..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~IvrP~~v~~~~~H~~~~~~~~~~~~~~~v~~~~~~i~HYr~~~  235 (285)
T PF01697_consen  156 GPSFYESSPSQLVSSLYFKRFRKTGVKKTRPGHRSKSIVRPEKVNSMGIHHPWKFYNSSGYKILHVPPEIALINHYRDKS  235 (285)
T ss_pred             CccccccchHHhhhcceeeeecccccccccccccceeecChhHeEEEecccceeecCCCCceEEEeCcceEEEeccccCc
Confidence            555544444444443333333211        136999999999998644333322223666778899999999999988


Q ss_pred             hHH
Q 043544          540 WET  542 (619)
Q Consensus       540 ~ee  542 (619)
                      +.+
T Consensus       236 ~~~  238 (285)
T PF01697_consen  236 WPE  238 (285)
T ss_pred             ccc
Confidence            443

The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>KOG4735 consensus Extracellular protein with conserved cysteines [Function unknown] Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [] Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>KOG4735 consensus Extracellular protein with conserved cysteines [Function unknown] Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query619
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 46.0 bits (108), Expect = 3e-05
 Identities = 85/611 (13%), Positives = 168/611 (27%), Gaps = 186/611 (30%)

Query: 64  LSSNSIQDSFRLTFKSFTLK--IEE-------RVLFPDHLLLMVSNKVDQ-TESLDCVYY 113
                +QD  +       +   I           LF   LL      V +  E +  + Y
Sbjct: 33  FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF-WTLLSKQEEMVQKFVEEVLRINY 91

Query: 114 KLLNDSATRIEEAADVRMQPVFSVDEYDEFR---WIARCPLPPVNYS---AVVDLR--LR 165
           K L    + I+     + QP      Y E R   +         N S     + LR  L 
Sbjct: 92  KFL---MSPIKT---EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL 145

Query: 166 RDAPAENYLSL--M-------------NNNRTETVH----FWDKMA-------------- 192
              PA+  + +  +              + + +       FW  +               
Sbjct: 146 ELRPAK-NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK 204

Query: 193 --YAAVLDGKTAVVFVKGLNLRPH--RESDHTLF------RCQFGLGH-WEKD--EGFAF 239
             Y    +  +       + LR H  +     L        C   L +         F  
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264

Query: 240 ------------VTEAVAAAQEVVRCLLPRSISKNPNKAKGIRVAVVNVNDKAL----DD 283
                       VT+ ++AA      L   S++  P++ K + +  ++   + L      
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 284 RKP-VTSVAG--IRNSRYHIQG----KNQRLSRDYVSMPSVARIHNSKSHKQRKGGGKFE 336
             P   S+    IR+              +L+   +   S+  +     +++      F+
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT-IIES-SLNVL-EPAEYRKM-----FD 376

Query: 337 LC------------VCTMLWNQASLIREWIM-----YHAWLGVERW------FIYD---- 369
                         + +++W    +I+  +M      H +  VE+        I      
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFD--VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE 434

Query: 370 ----NNSDDGIQKVIEELNLENYNVSR--HNWPWIKTQEAG--FSHCA---LTARNECKW 418
                 ++  + + I    +++YN+ +   +   I        +SH         +  + 
Sbjct: 435 LKVKLENEYALHRSI----VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERM 490

Query: 419 VGFFDVDEFFYFPRDHRLGLLGENSLRSLVANFSSSKTVAEIRTSCHSFGPSGLSSHPAQ 478
             F  V  F  F                    F   K    IR    ++  SG   +  Q
Sbjct: 491 TLFRMV--FLDF-------------------RFLEQK----IRHDSTAWNASGSILNTLQ 525

Query: 479 GVTVGYTCRLQSPERHKSIVRPDLLNSSLLNVVHHFRLKAGYRYLNMPE----NIAVINH 534
                   +L+  + +  I   D     L+N +  F  K     +         IA++  
Sbjct: 526 --------QLKFYKPY--ICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAE 575

Query: 535 YKYQVWETFRA 545
            +    E  + 
Sbjct: 576 DEAIFEEAHKQ 586

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query619
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 98.68
3bcv_A240 Putative glycosyltransferase protein; protein stru 98.56
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 98.33
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 98.25
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 98.12
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 98.02
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 97.94
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 97.91
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 97.84
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 97.7
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 97.58
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 97.09
2bo4_A 397 Mannosylglycerate synthase; catalysis, glycosyltra 96.73
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 96.56
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 96.41
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 94.66
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 93.8
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 83.37
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
Probab=98.68  E-value=1.9e-07  Score=91.08  Aligned_cols=94  Identities=16%  Similarity=0.158  Sum_probs=74.2

Q ss_pred             EEEEEEeecchHHHHHHHHHHHHhcCc--cEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCC--------CcchHHHHH
Q 043544          336 ELCVCTMLWNQASLIREWIMYHAWLGV--ERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWP--------WIKTQEAGF  405 (619)
Q Consensus       336 ~L~VctIvkNEA~~L~EWIeyH~alGV--D~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp--------~~~~Q~~A~  405 (619)
                      .++|++.++|++++|.++|++-..+-.  -+++|.|++|+|+|.++++.+.+ ...|.++.-+        .......+.
T Consensus         2 ~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~   80 (255)
T 1qg8_A            2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALI   80 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHH
T ss_pred             eEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHH
Confidence            478888889999999999998765533  27999999999999999999965 3347666555        344556778


Q ss_pred             HHHHHHccCCCcEEEEeeCCceeecCCC
Q 043544          406 SHCALTARNECKWVGFFDVDEFFYFPRD  433 (619)
Q Consensus       406 n~Cl~r~~~~adWVlFlDaDEFL~~P~~  433 (619)
                      |.++..  ...+||+|+|.|.++ .|..
T Consensus        81 N~gi~~--a~g~~i~~lD~Dd~~-~~~~  105 (255)
T 1qg8_A           81 NQAIEM--AEGEYITYATDDNIY-MPDR  105 (255)
T ss_dssp             HHHHHH--CCCSEEEEEETTEEE-CTTH
T ss_pred             HHHHHH--cCCCEEEEeCCCCcc-ChHH
Confidence            888876  468999999999998 4543
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query619
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 98.43
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 98.41
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 97.98
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 93.69
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=98.43  E-value=9.8e-07  Score=83.93  Aligned_cols=93  Identities=18%  Similarity=0.201  Sum_probs=71.3

Q ss_pred             EEEEEEeecchHHHHHHHHHHHHhcCc--cEEEEEEcCCCccHHHHHHHHhcCCccEEEeeCCCc--------chHHHHH
Q 043544          336 ELCVCTMLWNQASLIREWIMYHAWLGV--ERWFIYDNNSDDGIQKVIEELNLENYNVSRHNWPWI--------KTQEAGF  405 (619)
Q Consensus       336 ~L~VctIvkNEA~~L~EWIeyH~alGV--D~f~IYDNgStD~T~eIL~~y~~~G~~Vt~~~Wp~~--------~~Q~~A~  405 (619)
                      .++|++.++|++++|.++|++-..+=.  -+++|+|++|+|+|.++|+.+.+.. ++..+..+..        .....+.
T Consensus         2 ~vSiiip~yN~~~~l~~~l~Si~~Qt~~~~eiivvdd~S~d~t~~~l~~~~~~~-~i~~~~~~~~~~~~~~~~~g~~~a~   80 (255)
T d1qg8a_           2 KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDN-RVRFYQSDISGVKERTEKTRYAALI   80 (255)
T ss_dssp             CEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGST-TEEEEECCCCSHHHHHSSCHHHHHH
T ss_pred             EEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHhhhhc-ccccccccccccccccccchhcccc
Confidence            468888889999999999998655422  2799999999999999999986543 3666554422        2334577


Q ss_pred             HHHHHHccCCCcEEEEeeCCceeecCC
Q 043544          406 SHCALTARNECKWVGFFDVDEFFYFPR  432 (619)
Q Consensus       406 n~Cl~r~~~~adWVlFlDaDEFL~~P~  432 (619)
                      |.++..+  +++|++|+|+|.++ .|.
T Consensus        81 N~gi~~a--~g~~i~~lD~Dd~~-~p~  104 (255)
T d1qg8a_          81 NQAIEMA--EGEYITYATDDNIY-MPD  104 (255)
T ss_dssp             HHHHHHC--CCSEEEEEETTEEE-CTT
T ss_pred             ccccccc--cccccccccccccc-ccc
Confidence            8888764  68999999999999 464
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure