Citrus Sinensis ID: 043576

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPCACA
Secondary Structure (PSIPRED)
cEEEEEEcccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccEEcccccccc
Coil and Loop (DISEMBL)
mmhmtfywGRQVTLLFDfwrtdswpsyALTLLACFLFSAFYQYLEDRRVRLNRiavgqkpaiadvetpllqrKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVfrsesddvtlvvdnpcaca
Flexible Loop (DISEMBL)
MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVgqkpaiadvetpllQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRsesddvtlVVDNPCACA
Low Complexity Region (SEG)
MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPCACA
Disordered region (IsUnstruct)
***MTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPC***
Disordered Region (DISOPRED)
MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPCACA
Disordered Region (DISEMBL)
MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPCACA
Disordered Region (DISPRO)
*MHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIA*******************VGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPCACA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPCACA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
Q93VM8	146	Copper transporter 5 OS=A	yes	no	0.986	0.965	0.540	3e-42
Q69P80	149	Copper transporter 5.1 OS	yes	no	1.0	0.959	0.563	4e-29
Q8GWP3	145	Copper transporter 6 OS=A	no	no	0.748	0.737	0.316	4e-14
Q9FGU8	151	Copper transporter 3 OS=A	no	no	0.825	0.781	0.337	2e-13
Q94EE4	161	Copper transporter 1 OS=O	no	no	0.755	0.670	0.376	9e-12
Q39065	170	Copper transporter 1 OS=A	no	no	0.811	0.682	0.331	6e-11
Q9STG2	158	Copper transporter 2 OS=A	no	no	0.727	0.658	0.318	2e-10
Q8SAA5	145	Copper transporter 4 OS=A	no	no	0.769	0.758	0.333	6e-10
Q60EN8	151	Copper transporter 2 OS=O	no	no	0.748	0.708	0.380	1e-09
Q6Z0Q9	176	Putative copper transport	no	no	0.314	0.255	0.644	3e-08

>sp|Q93VM8|COPT5_ARATH Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=2 SV=1

 Score =  169 bits (429), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/148 (54%), Positives = 105/148 (70%), Gaps = 7/148 (4%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTFYWG + T+LFDFW+TDSW SY LTL+ACF+FSAFYQYLE+RR++   ++  ++ 
Sbjct: 1   MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query: 61  -----AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVV 115
                + + V  PL+ +   G  SAA+ A   LFG+N+ +GYLLMLA MSFNGGVF+A+V
Sbjct: 61  PPPPRSSSGVSAPLIPKS--GTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIV 118

Query: 116 LGLMIGYLVFRSESDDVTLVVDNPCACA 143
           +GL  GY VFRS+        D+PC CA
Sbjct: 119 VGLTAGYAVFRSDDGGADTATDDPCPCA 146

Involved in the transport of copper.
Arabidopsis thaliana (taxid: 3702)

>sp|Q69P80|COP51_ORYSJ Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1 PE=2 SV=1

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/149 (56%), Positives = 102/149 (68%), Gaps = 6/149 (4%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQK- 59
           MMHMTFYWG+ VT+LFD WRT +W  Y L+L+A  L SAFYQYLE  R+R+  +A  +  
Sbjct: 1   MMHMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPA 60

Query: 60  ----PAIADV-ETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAV 114
               PA +D    PLL          AR+A   LFG+NSG+GYLLMLA+MSFNGGVF+AV
Sbjct: 61  SIPPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVFVAV 120

Query: 115 VLGLMIGYLVFRSESDDVTLVVDNPCACA 143
           V+GL  GYL FRS   +  +VVDNPCACA
Sbjct: 121 VVGLAAGYLAFRSSDGEDLVVVDNPCACA 149

Involved in the transport of copper.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8GWP3|COPT6_ARATH Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 32/139 (23%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTF+WG+   +LF  W   S   Y L L+  FL +   ++L    +           
Sbjct: 24  MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSI----------- 72

Query: 61  AIADVETPLLQRKVVGKFSAARIAG---TALFGINSGVGYLLMLAIMSFNGGVFLAVVLG 117
                        + G+ S +R  G   TA++ + +G+ YL+MLA+MSFNGGVF+  + G
Sbjct: 73  -------------LRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAG 119

Query: 118 LMIGYLV-----FRSESDD 131
             +G+++     F++ SDD
Sbjct: 120 FAVGFMLFGSTAFKNPSDD 138

Involved in the transport of copper.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGU8|COPT3_ARATH Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 27/145 (18%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTF+WG+   +LFD W   S   Y + L   F+ SAF + L       +R     K 
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECL-------SRCGF-MKS 80

Query: 61  AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120
             A +   LLQ              TA++ + + + YL+MLA+MSFNGGVF+A + G  +
Sbjct: 81  GPASLGGGLLQ--------------TAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGL 126

Query: 121 GYLV-----FRSESDDVTLVVDNPC 140
           G+++     FR+ S +    V + C
Sbjct: 127 GFMIFGSRAFRATSSNSHTEVQSHC 151

Involved in the transport of copper.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EE4|COPT1_ORYSJ Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 60/125 (48%), Gaps = 17/125 (13%)

Query: 3   HMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAI 62
           HMTF+WG+   +LF  W       YAL L+  F  +   ++L  RR              
Sbjct: 34  HMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRR-------------- 79

Query: 63  ADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGY 122
           AD     L R+       AR    A+  +  GV YLLMLA+MSFNGGVFL  V G   G+
Sbjct: 80  ADACLAALARRAPAAGGLAR---AAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGF 136

Query: 123 LVFRS 127
           L FR+
Sbjct: 137 LAFRA 141

Involved in the transport of copper, in cooperation with SWEET11 and COPT2. Contributes to the removal of copper (Cu) from xylem, and thus to the sensitivity toward bacterial pathogens such as X.oryzae pv. oryzae (Xoo).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 32/148 (21%)

Query: 5   TFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIAD 64
           TF+WG+   +LF  W   S   YAL L+  F  +   ++L                    
Sbjct: 45  TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSS---------------- 88

Query: 65  VETPLLQRKVVGKFSAARIAG---TALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIG 121
                L R   G  SA R AG   TA++ +  G+ YL+MLA+MSFN GVFL  + G  +G
Sbjct: 89  -----LLRGSTGD-SANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVG 142

Query: 122 YLV-----FRSESDD--VTLVVDNPCAC 142
           +++     FR+ SDD     V  + CAC
Sbjct: 143 FMLFGSQTFRNTSDDRKTNYVPPSGCAC 170

Copper transporter involved in copper acquisition and transport in leaves. Required for copper homeostasis and normal plant growth and development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9STG2|COPT2_ARATH Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 28/132 (21%)

Query: 6   FYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADV 65
           F+WG+   +LF  W   S   YAL L+  FL +   ++L                     
Sbjct: 34  FFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWL--------------------A 73

Query: 66  ETPLLQRKVVGKFS-AARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLV 124
            +P+L  +V G  + AA +A TA++ + +G+ YL+MLA+MSFN GVF+  + G  +G+ +
Sbjct: 74  HSPIL--RVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFL 131

Query: 125 -----FRSESDD 131
                F+  SDD
Sbjct: 132 FGSTTFKKPSDD 143

Involved in the transport of copper.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8SAA5|COPT4_ARATH Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 19/129 (14%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           ++H TFYWG    +LF  W       YAL L+  F  +   ++L  R    + I  G   
Sbjct: 29  LLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLA-RCSDASSIKQG--- 84

Query: 61  AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120
             AD    +  R             TA++ + SG  YL++LA++SFNGGVFLA + G  +
Sbjct: 85  --ADKLAKVAFR-------------TAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHAL 129

Query: 121 GYLVFRSES 129
           G+ VFR  +
Sbjct: 130 GFAVFRGRA 138

Involved in the transport of copper.

Arabidopsis thaliana (taxid: 3702)

>sp|Q60EN8|COPT2_ORYSJ Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 19/126 (15%)

Query: 2   MHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPA 61
           MHMTF+WG+   +LF  W       YAL +L  F+F A    LE R  R+       +  
Sbjct: 23  MHMTFFWGKNTEVLFTLWPGARGGMYALAIL--FMF-ALAVLLEFRGYRV------LEAR 73

Query: 62  IADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIG 121
           +A    P     +     A R+          GV YL+MLA+MSFNGGVFLA+V G   G
Sbjct: 74  LARRRAPRAAAALRTAVHAVRV----------GVAYLIMLALMSFNGGVFLAIVAGHAAG 123

Query: 122 YLVFRS 127
           +L FR+
Sbjct: 124 FLAFRA 129

Involved in the transport of copper, in cooperation with SWEET11 and COPT1. Contributes to the removal of copper (Cu) from xylem, and thus to the sensitivity toward bacterial pathogens such as X.oryzae pv. oryzae (Xoo).

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6Z0Q9|COP52_ORYSJ Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica GN=COPT5.2 PE=3 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 34/45 (75%)

Query: 1  MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLE 45
          MMHM+FYWG  VT+LFD WRT  WP Y  +LLA FL +A YQ+LE
Sbjct: 1  MMHMSFYWGTSVTILFDGWRTSGWPGYLASLLALFLAAALYQHLE 45

Involved in the transport of copper.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
225429714	144	PREDICTED: copper transporter 5 [Vitis v	0.986	0.979	0.691	9e-49
449452941	142	PREDICTED: copper transporter 5-like [Cu	0.993	1.0	0.636	2e-48
388493856	143	unknown [Lotus japonicus] gi|388502884|g	0.986	0.986	0.6	7e-46
255550209	143	copper transporter, putative [Ricinus co	0.993	0.993	0.618	1e-45
255550423	144	copper transporter, putative [Ricinus co	0.993	0.986	0.620	5e-45
224069160	141	copper transporter [Populus trichocarpa]	0.965	0.978	0.650	7e-44
357465895	143	Copper transporter [Medicago truncatula]	0.986	0.986	0.586	1e-43
224088697	149	copper transporter [Populus trichocarpa]	0.993	0.953	0.6	2e-43
356563950	148	PREDICTED: copper transporter 5-like [Gl	1.0	0.966	0.594	6e-42
356514766	143	PREDICTED: copper transporter 5-like [Gl	0.986	0.986	0.579	1e-41

>gi|225429714|ref|XP_002281982.1| PREDICTED: copper transporter 5 [Vitis vinifera] gi|321496084|gb|ADW93919.1| copper transporter [Vitis vinifera]

 Score =  197 bits (502), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 101/146 (69%), Positives = 114/146 (78%), Gaps = 5/146 (3%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIA--VGQ 58
           MMHMTFYW   VTLL D W+T+SW SY LTLLAC + SAFYQYLEDRR+RL  IA  VG 
Sbjct: 1   MMHMTFYWSTSVTLLIDSWKTESWASYGLTLLACLIASAFYQYLEDRRIRLKLIAASVGS 60

Query: 59  KPAIAD-VETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLG 117
            PA A  +E PLLQ K+ G++SA + AG ALFGINS +GYL+MLA+MSFNGGVFLAVVLG
Sbjct: 61  SPASASPIEEPLLQSKI-GRWSATKFAGAALFGINSAIGYLIMLAVMSFNGGVFLAVVLG 119

Query: 118 LMIGYLVFRSESDDVTLVVDNPCACA 143
           L IGYL+FRS   DV  VVDN CACA
Sbjct: 120 LAIGYLLFRSGDGDVA-VVDNACACA 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452941|ref|XP_004144217.1| PREDICTED: copper transporter 5-like [Cucumis sativus] gi|449489282|ref|XP_004158267.1| PREDICTED: copper transporter 5-like isoform 1 [Cucumis sativus] gi|449489286|ref|XP_004158268.1| PREDICTED: copper transporter 5-like isoform 2 [Cucumis sativus]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/143 (63%), Positives = 113/143 (79%), Gaps = 1/143 (0%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTFYW R+VTLL + WRT SW SY+L+LLACF+ S FYQYLE+ R+RL ++    KP
Sbjct: 1   MMHMTFYWSREVTLLINSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRL-KLLQCPKP 59

Query: 61  AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120
           + +++E PLL+ KV GKF A R AG   FG+NS +GYLLMLAIMSFNGGVF+A+V GL I
Sbjct: 60  SPSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAI 119

Query: 121 GYLVFRSESDDVTLVVDNPCACA 143
           GYLVFRS+ +DV +  +NPCACA
Sbjct: 120 GYLVFRSDDEDVIVSAENPCACA 142

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493856|gb|AFK34994.1| unknown [Lotus japonicus] gi|388502884|gb|AFK39508.1| unknown [Lotus japonicus]

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 87/145 (60%), Positives = 117/145 (80%), Gaps = 4/145 (2%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTFYWG++VT+LFD W+TDSW SY L+LLACF+ + FYQ LE+RR+RL   A G KP
Sbjct: 1   MMHMTFYWGKKVTILFDSWKTDSWTSYILSLLACFIIAVFYQVLENRRIRLKLFAAG-KP 59

Query: 61  AIADVETPLLQRKVVGKFSAA--RIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGL 118
              ++ETPL++RK+VG  + A  ++ G+ LFG++SG+GYLLMLA+MSFNGGVF+A+V+GL
Sbjct: 60  VPLEIETPLIRRKIVGDKAKAGVKVGGSILFGVSSGIGYLLMLAVMSFNGGVFVAIVVGL 119

Query: 119 MIGYLVFRSESDDVTLVVDNPCACA 143
             GY  FRS+ +D ++VVD+ CACA
Sbjct: 120 AFGYFFFRSDGED-SVVVDSSCACA 143

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550209|ref|XP_002516155.1| copper transporter, putative [Ricinus communis] gi|223544641|gb|EEF46157.1| copper transporter, putative [Ricinus communis]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/144 (61%), Positives = 111/144 (77%), Gaps = 2/144 (1%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTFYW ++VTLLFD W+T +W SY LTLL C + SA YQ+LE+RRV+L   A     
Sbjct: 1   MMHMTFYWSKEVTLLFDSWKTKTWLSYGLTLLVCVITSASYQFLENRRVQLKVNAANAGS 60

Query: 61  AIADVETPLLQRKV-VGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLM 119
           A+  V+ PLLQ K   GK+S AR+AG  LFG+NS +GYLLMLA+MSFNGGV LA V GL 
Sbjct: 61  AVG-VDEPLLQSKTGGGKWSVARVAGAVLFGVNSAIGYLLMLAVMSFNGGVLLAAVFGLA 119

Query: 120 IGYLVFRSESDDVTLVVDNPCACA 143
           IGYL+FRSE +++T+++DNPCACA
Sbjct: 120 IGYLLFRSEDENLTMILDNPCACA 143

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550423|ref|XP_002516262.1| copper transporter, putative [Ricinus communis] gi|223544748|gb|EEF46264.1| copper transporter, putative [Ricinus communis]

 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 90/145 (62%), Positives = 110/145 (75%), Gaps = 3/145 (2%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLN--RIAVGQ 58
           MMHMT YWG +VTLLFD W+TDSWPSY L+LLACFLFS+FYQY+EDRR++      A   
Sbjct: 1   MMHMTLYWGIKVTLLFDSWKTDSWPSYLLSLLACFLFSSFYQYMEDRRIKFKSLAAASAA 60

Query: 59  KPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGL 118
               + V  PLL+   +G+FS+A+ A   LFG NS +GYLLMLAIMSFNGGVFLA V GL
Sbjct: 61  TSQPSSVTVPLLRSSKLGRFSSAKFAAAILFGFNSAIGYLLMLAIMSFNGGVFLATVAGL 120

Query: 119 MIGYLVFRSESDDVTLVVDNPCACA 143
            +GYLVFRSE D+  +V+++PCACA
Sbjct: 121 SVGYLVFRSE-DEQVVVIEDPCACA 144

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069160|ref|XP_002326289.1| copper transporter [Populus trichocarpa] gi|222833482|gb|EEE71959.1| copper transporter [Populus trichocarpa]

 Score =  181 bits (460), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 95/146 (65%), Positives = 112/146 (76%), Gaps = 8/146 (5%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAV---G 57
           MMHMT YWG +VTLLFD W+TDSW SY L+LLACFLFSAFYQYLEDRR+R   IAV    
Sbjct: 1   MMHMTLYWGIKVTLLFDCWKTDSWFSYLLSLLACFLFSAFYQYLEDRRIRFKAIAVSNPS 60

Query: 58  QKPAIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLG 117
           Q+P    V  PLL  K   + S+A+ A   LFGIN+ +GYLLMLAIMSFNGGVFLA+VLG
Sbjct: 61  QQP--PPVNAPLLTPK--RRASSAKFATALLFGINAAIGYLLMLAIMSFNGGVFLAIVLG 116

Query: 118 LMIGYLVFRSESDDVTLVVDNPCACA 143
           L +GY++FRS  ++V +VVDN CACA
Sbjct: 117 LTVGYVLFRSGDEEV-VVVDNTCACA 141

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357465895|ref|XP_003603232.1| Copper transporter [Medicago truncatula] gi|355492280|gb|AES73483.1| Copper transporter [Medicago truncatula] gi|388514357|gb|AFK45240.1| unknown [Medicago truncatula]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 85/145 (58%), Positives = 114/145 (78%), Gaps = 4/145 (2%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTFYW ++VTLLFD W+TDSW SYAL+LLAC + S FYQ+LE+RR+RL  +A G KP
Sbjct: 1   MMHMTFYWSKKVTLLFDSWKTDSWTSYALSLLACLIVSIFYQFLENRRIRLKLLASG-KP 59

Query: 61  AIADVETPLLQRKVVGKFS--AARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGL 118
             A +E PLL+R   G  +    R+AG  LFG++S +GY LML++MS+NGGVF+A+V+GL
Sbjct: 60  FPAAIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGL 119

Query: 119 MIGYLVFRSESDDVTLVVDNPCACA 143
            +GYL+FRS+ +D ++VVD+ CACA
Sbjct: 120 AVGYLLFRSDGED-SVVVDSSCACA 143

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088697|ref|XP_002308515.1| copper transporter [Populus trichocarpa] gi|118484944|gb|ABK94337.1| unknown [Populus trichocarpa] gi|222854491|gb|EEE92038.1| copper transporter [Populus trichocarpa]

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 90/150 (60%), Positives = 115/150 (76%), Gaps = 8/150 (5%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQ-- 58
           MMHMTFYWGR+VT+L + W T +W  Y+L+LLAC + S FYQYLE+ R+RL  I+ G   
Sbjct: 1   MMHMTFYWGREVTILVNSWHTKTWLGYSLSLLACLIASIFYQYLENHRMRLKLISSGSVK 60

Query: 59  -KPA-IADVETPLLQRKVVG---KFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLA 113
            KP+  A ++ PLL+    G   ++SAAR+ G  LFGINSG+GYLLML +MSFNGGVFLA
Sbjct: 61  AKPSPSATIDEPLLRTMGGGGKVRWSAARVGGAVLFGINSGIGYLLMLVVMSFNGGVFLA 120

Query: 114 VVLGLMIGYLVFRSESDDVTLVVDNPCACA 143
           VVLGL IGYL+FRSE D+ ++++DNPCACA
Sbjct: 121 VVLGLAIGYLLFRSE-DENSMLLDNPCACA 149

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563950|ref|XP_003550220.1| PREDICTED: copper transporter 5-like [Glycine max]

 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 88/148 (59%), Positives = 111/148 (75%), Gaps = 5/148 (3%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMT YWG++VT+L D W+TDSW SY L+LLAC + +AFYQYLE+RR+RL  +A  ++P
Sbjct: 1   MMHMTLYWGKKVTILIDSWKTDSWTSYVLSLLACLVVAAFYQYLENRRIRLKLLAGDRRP 60

Query: 61  AIA-DVETPLLQRKVVGKFSA---ARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVL 116
             A ++ TPLL+  V G  +A    + A   LFG+NS +GYLLMLAIMSFNGGVFLA+V+
Sbjct: 61  LPAPEIRTPLLRWGVAGGDNARLGVKFAEAVLFGVNSAIGYLLMLAIMSFNGGVFLAIVV 120

Query: 117 GLMIGYLVFRSESDDVTLVVD-NPCACA 143
           GL IGY  FR+E +D  LVVD N CACA
Sbjct: 121 GLTIGYFFFRNEGEDDALVVDNNSCACA 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514766|ref|XP_003526074.1| PREDICTED: copper transporter 5-like [Glycine max]

 Score =  174 bits (440), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/145 (57%), Positives = 109/145 (75%), Gaps = 4/145 (2%)

Query: 1   MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           MMHMTFYW R+V LL D W+T+ W  Y LTLLAC + +AFYQ+LE+RR+RL  I  G KP
Sbjct: 1   MMHMTFYWSRKVNLLIDSWKTNDWTDYLLTLLACLVVAAFYQFLENRRIRLKLIGSG-KP 59

Query: 61  AIADVETPLLQRKVVGK--FSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGL 118
             A++E PLL+RK+ G       ++AG  LFG++S VGYLLML++MSFNGGVF+A+V+GL
Sbjct: 60  FPAEIEAPLLRRKLAGNRVKVGVKVAGAFLFGLSSAVGYLLMLSVMSFNGGVFVAIVVGL 119

Query: 119 MIGYLVFRSESDDVTLVVDNPCACA 143
            +GY  FR+E +D +LVVD  CACA
Sbjct: 120 AVGYFFFRNEGED-SLVVDTSCACA 143

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
TAIR|locus:2180474	146	COPT5 "copper transporter 5" [	0.986	0.965	0.547	2e-40
TAIR|locus:2153311	151	COPT3 "copper transporter 3" [	0.307	0.291	0.454	4.8e-17
TAIR|locus:504955905	145	COPT4 "copper transporter 4" [	0.377	0.372	0.454	1.7e-15
TAIR|locus:504955951	145	COPT6 "copper transporter 6" [	0.762	0.751	0.321	1e-13
WB|WBGene00017954	162	F31E8.4 [Caenorhabditis elegan	0.405	0.358	0.366	8e-12
DICTYBASE|DDB_G0285545	146	DDB_G0285545 "Ctr copper trans	0.937	0.917	0.300	4.1e-10
GENEDB_PFALCIPARUM|PF14_0369	235	PF14_0369 "hypothetical protei	0.797	0.485	0.376	4.7e-10
UNIPROTKB|Q8IL79	235	PF14_0369 "Copper transporter	0.797	0.485	0.376	4.7e-10
UNIPROTKB|J9P9D2	178	SLC31A1 "Uncharacterized prote	0.874	0.702	0.328	8.4e-10
UNIPROTKB|F1NFX8	183	F1NFX8 "Uncharacterized protei	0.860	0.672	0.315	1.4e-09

TAIR|locus:2180474 COPT5 "copper transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 81/148 (54%), Positives = 106/148 (71%)

Query:     1 MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQK- 59
             MMHMTFYWG + T+LFDFW+TDSW SY LTL+ACF+FSAFYQYLE+RR++   ++  ++ 
Sbjct:     1 MMHMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRA 60

Query:    60 P----AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVV 115
             P    + + V  PL+ +   G  SAA+ A   LFG+N+ +GYLLMLA MSFNGGVF+A+V
Sbjct:    61 PPPPRSSSGVSAPLIPKS--GTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIV 118

Query:   116 LGLMIGYLVFRSESDDVTLVVDNPCACA 143
             +GL  GY VFRS+        D+PC CA
Sbjct:   119 VGLTAGYAVFRSDDGGADTATDDPCPCA 146

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA;ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0035434 "copper ion transmembrane transport" evidence=IEA

GO:0015089 "high affinity copper ion transmembrane transporter activity" evidence=IGI

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0005770 "late endosome" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0015680 "intracellular copper ion transport" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2153311 COPT3 "copper transporter 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
 Identities = 20/44 (45%), Positives = 34/44 (77%)

Query:    86 TALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSES 129
             TA++ + + + YL+MLA+MSFNGGVF+A + G  +G+++F S +
Sbjct:    92 TAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRA 135

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA;ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0035434 "copper ion transmembrane transport" evidence=IEA

GO:0015089 "high affinity copper ion transmembrane transporter activity" evidence=IGI

TAIR|locus:504955905 COPT4 "copper transporter 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
 Identities = 25/55 (45%), Positives = 38/55 (69%)

Query:    76 GKFSAARIA-GTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSES 129
             G    A++A  TA++ + SG  YL++LA++SFNGGVFLA + G  +G+ VFR  +
Sbjct:    84 GADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRA 138

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA;ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0035434 "copper ion transmembrane transport" evidence=IEA

GO:0015089 "high affinity copper ion transmembrane transporter activity" evidence=IGI

TAIR|locus:504955951 COPT6 "copper transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 44/137 (32%), Positives = 69/137 (50%)

Query:     1 MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
             MMHMTF+WG+   +LF  W   S   Y L L+  FL +   ++L    +   R       
Sbjct:    24 MMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGR------- 76

Query:    61 AIADVETPLLQRKVVGKFSAAR-IAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLM 119
                            G  S A+ +  TA++ + +G+ YL+MLA+MSFNGGVF+  + G  
Sbjct:    77 ---------------GSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFA 121

Query:   120 IGYLVF-----RSESDD 131
             +G+++F     ++ SDD
Sbjct:   122 VGFMLFGSTAFKNPSDD 138

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA;ISS

GO:0006825 "copper ion transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0035434 "copper ion transmembrane transport" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

WB|WBGene00017954 F31E8.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 101 (40.6 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
 Identities = 22/60 (36%), Positives = 38/60 (63%)

Query:    68 PLLQRKVVGK--FSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVF 125
             PL+Q     K  F++ R+A  AL+G+ + + Y LML  M++N  + L++V+G  +GY +F
Sbjct:    89 PLVQLSGFTKRLFTSYRLAQGALYGLQALLAYTLMLIAMTYNMNLILSIVVGEAVGYFLF 148

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035434 "copper ion transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0285545 DDB_G0285545 "Ctr copper transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 43/143 (30%), Positives = 69/143 (48%)

Query:     4 MTFYWGRQVT-LLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAI 62
             M F+W  + + LLF  W  +S  +YALTLL CF    F ++    R  LN     ++   
Sbjct:     1 MLFHWTYENSPLLFSTWVFNSPGAYALTLLICFSICLFSEFWSTYRHGLNSTNSSEQERS 60

Query:    63 ADVETPLLQRK------VVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVL 116
               +      +K      +  KF  + +  T +  I   V Y +ML  MSFNGG+ ++ VL
Sbjct:    61 LLINNHNSGKKNSSLKDLYNKFLISHLWKTIVHMIAFIVNYTIMLIFMSFNGGICISCVL 120

Query:   117 GLMIGYLVFRSE--SDDVTLVVD 137
             G+ +G+ +F  +  S  V ++ D
Sbjct:   121 GIGVGFYLFGQKRFSKSVAIIED 143

GO:0035434 "copper ion transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

GENEDB_PFALCIPARUM|PF14_0369 PF14_0369 "hypothetical protein" [Plasmodium falciparum (taxid:5833)]

 Score = 144 (55.7 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 47/125 (37%), Positives = 68/125 (54%)

Query:     2 MHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQK-P 60
             M M+F       +LF+ W T S  SY ++L+ CF F      +  + VRLN   V Q  P
Sbjct:    91 MPMSFQLTTHTIILFNKWETKSALSYYISLVLCFFFGIIS--VGFKVVRLN---VEQALP 145

Query:    61 AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120
                D  T + +  V+ K ++ R+  +  F I S   YLLML +M+FN G+F+AVVLGL  
Sbjct:   146 KTED--TNIFKSLVLFKNNSYRMLLS--FVIYSW-DYLLMLIVMTFNVGLFVAVVLGLSF 200

Query:   121 GYLVF 125
             G+ +F
Sbjct:   201 GFFIF 205

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|Q8IL79 PF14_0369 "Copper transporter putative" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 144 (55.7 bits), Expect = 4.7e-10, P = 4.7e-10
 Identities = 47/125 (37%), Positives = 68/125 (54%)

Query:     2 MHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQK-P 60
             M M+F       +LF+ W T S  SY ++L+ CF F      +  + VRLN   V Q  P
Sbjct:    91 MPMSFQLTTHTIILFNKWETKSALSYYISLVLCFFFGIIS--VGFKVVRLN---VEQALP 145

Query:    61 AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120
                D  T + +  V+ K ++ R+  +  F I S   YLLML +M+FN G+F+AVVLGL  
Sbjct:   146 KTED--TNIFKSLVLFKNNSYRMLLS--FVIYSW-DYLLMLIVMTFNVGLFVAVVLGLSF 200

Query:   121 GYLVF 125
             G+ +F
Sbjct:   201 GFFIF 205

GO:0020011 "apicoplast" evidence=RCA

UNIPROTKB|J9P9D2 SLC31A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 44/134 (32%), Positives = 68/134 (50%)

Query:     1 MMHMTFYWG-RQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRR---VRLNRIAV 56
             MMHMTFY+G + V LLF     ++    A   +A FL + FY+ L+  R   +R +++++
Sbjct:    30 MMHMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSI 89

Query:    57 --GQKPAIADVETPLLQ-RKVVGK--FSAARIAGTALFGINSGVGYLLMLAIMSFNGGVF 111
                  P      T L++  K VG+   S   +  T L  I   + Y LML  M++NG + 
Sbjct:    90 RYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLC 149

Query:   112 LAVVLGLMIGYLVF 125
             +AV  G   GY +F
Sbjct:   150 IAVAAGAGTGYFLF 163

GO:0016021 "integral to membrane" evidence=IEA

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA

UNIPROTKB|F1NFX8 F1NFX8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 42/133 (31%), Positives = 64/133 (48%)

Query:     2 MHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPA 61
             + MTF +  ++ LLFD W   S    AL++L   L S  Y+ ++  + ++ R A+   P 
Sbjct:    51 LQMTFSFSDRLVLLFDCWSVHSPTGLALSVLVILLLSVLYEVVKMGKAKVLRRALLAVPP 110

Query:    62 IADVETPLLQRKVV---GKFSAA-------RIAGTALFGINSGVGYLLMLAIMSFNGGVF 111
                 +T L   +     G  S +        +  T L  +   VGY LMLA+MS+N  +F
Sbjct:   111 TFSQDTLLGPNEGDSGDGGVSISPHRWFRYHVGQTLLHVVQVVVGYTLMLAVMSYNAWIF 170

Query:   112 LAVVLGLMIGYLV 124
             L VV G  +GY V
Sbjct:   171 LGVVAGSALGYFV 183

GO:0005375 "copper ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93VM8	COPT5_ARATH	No assigned EC number	0.5405	0.9860	0.9657	yes	no
Q69P80	COP51_ORYSJ	No assigned EC number	0.5637	1.0	0.9597	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032295001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (137 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	143
pfam04145	102	pfam04145, Ctr, Ctr copper transporter family	5e-28

>gnl|CDD|217925 pfam04145, Ctr, Ctr copper transporter family

 Score = 99.1 bits (248), Expect = 5e-28
 Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 24/125 (19%)

Query: 2   MHMTFYWG-RQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP 60
           M M F WG +   +LF  W   +   YA + +A FL +  Y+ L+  R +L R+      
Sbjct: 1   MSMLFNWGTKDTCVLFSGWHITTAGMYAGSCIAIFLLAILYEGLKRVRRKLERM------ 54

Query: 61  AIADVETPLLQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMI 120
                                 +    L  +  G+ YLLML +M++NGG+FLAVVLG  +
Sbjct: 55  -----------------SLFQHLIRALLHFLQVGLSYLLMLIVMTYNGGLFLAVVLGAAL 97

Query: 121 GYLVF 125
           GY +F
Sbjct: 98  GYFLF 102

The redox active metal copper is an essential cofactor in critical biological processes such as respiration, iron transport, oxidative stress protection, hormone production, and pigmentation. A widely conserved family of high-affinity copper transport proteins (Ctr proteins) mediates copper uptake at the plasma membrane. A series of clustered methionine residues in the hydrophilic extracellular domain, and an MXXXM motif in the second transmembrane domain, are important for copper uptake. These methionine probably coordinate copper during the process of metal transport. Length = 102

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
KOG3386	155	consensus Copper transporter [Inorganic ion transp	100.0
PF04145	144	Ctr: Ctr copper transporter family; InterPro: IPR0	100.0
PF11446	55	DUF2897: Protein of unknown function (DUF2897); In	92.97

>KOG3386 consensus Copper transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.4e-39  Score=240.68  Aligned_cols=140  Identities=35%  Similarity=0.485  Sum_probs=114.7

Q ss_pred             CeeeEEEcccceeEEecCceeCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccccccccCcccH
Q 043576            1 MMHMTFYWGRQVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKPAIADVETPLLQRKVVGKFSA   80 (143)
Q Consensus         1 mM~M~F~~~~~~~lLF~~W~~~s~~~~~~s~i~vf~la~~~e~l~~~r~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~   80 (143)
                      ||.|+|||++++++||++|+++|+++|+++|+++|++++++|+||+.|+.++++.+.+.++.++.+.|..+++ +...+.
T Consensus        15 ~m~M~f~~~~~~~iLF~~W~~~s~~~~~ls~i~iflla~l~E~Lk~~r~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~   93 (155)
T KOG3386|consen   15 MMMMFFHFKTIETILFSSWHITSAGGMALSCIAIFLLAVLYEALKFGREKLFRWQQLRQPTGHGHEIPLSGPS-KLLNSA   93 (155)
T ss_pred             ceEEEEecCceeEEEEcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCccccccCcc-hhhhhH
Confidence            6899999999999999999999999999999999999999999999999988775332211111222221111 111157


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhccccCCCcccccCCCccc
Q 043576           81 ARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVFRSESDDVTLVVDNPCAC  142 (143)
Q Consensus        81 ~~~~~~~l~~~q~~l~Y~LMLivMTyN~~i~~aVvlG~~~G~~~f~~~~~~~~~~~~~~c~~  142 (143)
                      .|++|+++|.+|+++||+|||++||||+|+++||++|+++||++|+.+.. .+..++++|+|
T Consensus        94 ~h~~qt~l~~~Q~~~sY~LMLifMtfN~~l~Lavv~Ga~~G~flF~~~~~-~~~~~~~~c~~  154 (155)
T KOG3386|consen   94 SHLIQTLLYVVQLGFSYLLMLIFMTFNGYLFLAVVLGAGVGYFLFGSLTF-TPTSEAEHCHA  154 (155)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhheeeeccc-cCCCccccccC
Confidence            89999999999999999999999999999999999999999999999977 44446777776

>PF04145 Ctr: Ctr copper transporter family; InterPro: IPR007274 The redox active metal copper is an essential cofactor in critical biological processes such as respiration, iron transport, oxidative stress protection, hormone production, and pigmentation

Probab=100.00  E-value=6.6e-39  Score=232.94  Aligned_cols=124  Identities=31%  Similarity=0.556  Sum_probs=58.6

Q ss_pred             eeeEEEccc-ceeEEecCceeCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----C----CCCCC----c-
Q 043576            2 MHMTFYWGR-QVTLLFDFWRTDSWPSYALTLLACFLFSAFYQYLEDRRVRLNRIAVGQKP----A----IADVE----T-   67 (143)
Q Consensus         2 M~M~F~~~~-~~~lLF~~W~~~s~~~~~~s~i~vf~la~~~e~l~~~r~~l~~~~~~~~~----~----~~~~~----~-   67 (143)
                      |+|+|||++ ++++||++|+++|.++|+++|+++|++|+++|++|.+|++++++...+..    +    .++.+    + 
T Consensus         1 M~M~F~~~~~~~~lLF~~W~~~s~~~~~~sci~~f~lav~~e~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (144)
T PF04145_consen    1 MSMYFHWGTIRDCLLFKSWKPSSAGAYVGSCIGVFLLAVLYEFLKALRRRLERRWARRRSRRASCSSSESRSRSDASSKS   80 (144)
T ss_dssp             ------------------------HHHHHHHHHHHHHHHHTTT-------------------------------------
T ss_pred             CeeEEEcCCCccEEEeCCcEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCcccCCCccccccc
Confidence            899999998 89999999999999999999999999999999999999999887632110    0    00000    0 


Q ss_pred             -cc-----ccccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhc
Q 043576           68 -PL-----LQRKVVGKFSAARIAGTALFGINSGVGYLLMLAIMSFNGGVFLAVVLGLMIGYLVF  125 (143)
Q Consensus        68 -~~-----l~~~~~~~~~~~~~~~~~l~~~q~~l~Y~LMLivMTyN~~i~~aVvlG~~~G~~~f  125 (143)
                       +.     ......+.++..|++|+++|++|++++|+|||+|||||+|+|+||++|.++||++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~Y~LMLvvMTyN~~l~~aVv~G~~~G~~~F  144 (144)
T PF04145_consen   81 SPSPSSTSPRSSRRRWFWSQHLIRALLHFVQVLLGYLLMLVVMTYNVYLFIAVVLGAGLGYFLF  144 (144)
T ss_dssp             ---------------------SHHHHHHHHHHHHHHHHHHHHHHTT--SSSHHHHHHTTSS-GG
T ss_pred             ccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhhhheeHHHHHHHHHHHHHheeeC
Confidence             00     00001123468999999999999999999999999999999999999999999998

A widely conserved family of high-affinity copper transport proteins (Ctr proteins) mediates copper uptake at the plasma membrane. A series of clustered methionine residues in the hydrophilic extracellular domain, and an MXXXM motif in the second transmembrane domain, are important for copper uptake. These methionines probably coordinate copper during the process of metal transport.; GO: 0005375 copper ion transmembrane transporter activity, 0035434 copper ion transmembrane transport, 0016021 integral to membrane; PDB: 2LS4_A 2LS2_A 2LS3_A.

>PF11446 DUF2897: Protein of unknown function (DUF2897); InterPro: IPR021550 This is a bacterial family of uncharacterised proteins

Probab=92.97  E-value=0.076  Score=32.81  Aligned_cols=27  Identities=26%  Similarity=0.444  Sum_probs=24.0

Q ss_pred             HhhhhHHHHHHHHHHHHhhhhccccCC
Q 043576          104 MSFNGGVFLAVVLGLMIGYLVFRSESD  130 (143)
Q Consensus       104 MTyN~~i~~aVvlG~~~G~~~f~~~~~  130 (143)
                      ||.|+|+++.+++|..+|...-=+.+.
T Consensus         1 ~~~~~wlIIviVlgvIigNia~LK~sA   27 (55)
T PF11446_consen    1 STWNPWLIIVIVLGVIIGNIAALKYSA   27 (55)
T ss_pred             CcchhhHHHHHHHHHHHhHHHHHHHhc
Confidence            689999999999999999998766655

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
2ls3_A	29	High affinity copper uptake protein 1; HCTR1 TMDS,	98.94
2ls4_A	26	High affinity copper uptake protein 1; HCTR1 TMDS,	98.23
2ls2_A	26	High affinity copper uptake protein 1; HCTR1 TMDS,	97.22

>2ls3_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}

Probab=98.94  E-value=3.1e-13  Score=72.47  Aligned_cols=28  Identities=32%  Similarity=0.508  Sum_probs=26.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 043576           81 ARIAGTALFGINSGVGYLLMLAIMSFNG  108 (143)
Q Consensus        81 ~~~~~~~l~~~q~~l~Y~LMLivMTyN~  108 (143)
                      +|++|+++|++|.++||+|||++||||+
T Consensus         1 ~h~~ra~l~~~q~~~~Y~LML~~MtyN~   28 (29)
T 2ls3_A            1 KHLLQTVLHIIQVVISYFLMLIFMTYNK   28 (29)
Confidence            4789999999999999999999999996

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00