Citrus Sinensis ID: 043727

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
LFKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPNSLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMARYR
cccHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccHHHHHHHccccccHHHHHccccccccHHHHHHHcccccccccccccccccccccEEEEEEccccHHHHHccccEEEEccccccEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHccc
ccHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccHHHHccccEEccccHHHHHHHHHccccccHHHHHHHHcccccccccccccccccccEEEEEEEEcccccHHccccEEEEEEcccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccEcccEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHHHHHHccccccHccccccccHHHHHccc
lfklclgdidiiNIVIrsgfkprrslEFIMftseepkrygiSCLGSLLLAGIESLAKDLIstvdgqniSFLHAARsaghakkhndLSSVFLKKGSYSAFVELQIEQGlileeegtSIVIVTAIAASASikvdfegneghagavlmpNSLAAAEVALAVEKHVlesgsidtvgTVGILELhsgainsipskshleididEKRRKTVIEKIHQSAITIAKnrgvtlsefkivnqdppalsdrSIILEAEVALKELNLTYKFMISrayhdspfmaryr
lfklclgdidiinivirsgfkprrSLEFIMFtseepkryGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAArsaghakkhNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPNSLAAAEVALAVEKHVLESGSIDTVGTVGILELHsgainsipskshleidiDEKRRKTVIEKIHQSaitiaknrgvtlsefkivnqdppalsDRSIILEAEVALKELNLTYKFMisrayhdspfmaryr
LFKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVelqieqglileeegtsivivtaiaasasiKVDFEGNEGHAGAVLMPNSlaaaevalavekhvleSGSIDTVGTVGILELHSGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMARYR
*FKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPNSLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHD********
LFKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPNSLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMARYR
LFKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAAR********NDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPNSLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMARYR
LFKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPNSLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMARYR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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LFKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPNSLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEIDIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMARYR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query275 2.2.26 [Sep-21-2011]
Q53389409 N-carbamoyl-L-amino acid N/A no 0.923 0.621 0.327 1e-24
P37113409 N-carbamoyl-L-amino acid N/A no 0.923 0.621 0.323 6e-23
Q57051411 Uncharacterized hydrolase yes no 0.941 0.630 0.298 3e-22
Q01264414 Hydantoin utilization pro N/A no 0.952 0.632 0.289 4e-16
O49434525 Allantoate deiminase, chl no no 0.898 0.470 0.276 4e-13
O32149412 Allantoate amidohydrolase yes no 0.876 0.584 0.281 4e-12
P77425411 Allantoate amidohydrolase N/A no 0.883 0.591 0.250 2e-11
A0QZE3438 Putative hydrolase MSMEG_ no no 0.650 0.408 0.256 3e-07
>sp|Q53389|AMAB2_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=1 SV=1 Back     alignment and function desciption
 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 135/272 (49%), Gaps = 18/272 (6%)

Query: 6   LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDG 65
           L  ++++  +   G      +E + FT EE  R+    +GS  +AG  +L  + +   D 
Sbjct: 96  LAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAG--TLPPEALECRDA 153

Query: 66  QNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAA 125
           + IS   A + AG     + L     K G+  A+VEL IEQG +LEE G  + IVT IA 
Sbjct: 154 EGISLAEAMKQAG--LDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAG 211

Query: 126 SASIKVDFEGNEGHAGAVLMPNSL------AAAEVALAVEKHVLESGSIDTVGTVGILEL 179
              +K   EG   HAGA   P SL      AAA++ + +E+    +G+  TVGTVG L +
Sbjct: 212 LIWVKFTIEGKAEHAGAT--PMSLRRDPMAAAAQIIIVIEEEARRTGT--TVGTVGQLHV 267

Query: 180 HSGAINSIPSKSHLEIDIDEKR---RKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPA 236
           + G IN IP +    +D+ + +   R  V + I   A TIAK R V ++  ++  + PP 
Sbjct: 268 YPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERL-QEMPPV 326

Query: 237 LSDRSIILEAEVALKELNLTYKFMISRAYHDS 268
           L    +   AE A ++L     ++ S A HDS
Sbjct: 327 LCSDEVKRAAEAACQKLGYPSFWLPSGAAHDS 358

Geobacillus stearothermophilus (taxid: 1422)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: 8EC: 7
>sp|P37113|AMAB1_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus stearothermophilus GN=amaB PE=3 SV=2 Back     alignment and function description
>sp|Q57051|Y588_HAEIN Uncharacterized hydrolase HI_0588 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0588 PE=1 SV=1 Back     alignment and function description
>sp|Q01264|HYUC_PSESN Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1 Back     alignment and function description
>sp|O49434|AAH_ARATH Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH PE=1 SV=2 Back     alignment and function description
>sp|O32149|ALLC_BACSU Allantoate amidohydrolase OS=Bacillus subtilis (strain 168) GN=pucF PE=2 SV=1 Back     alignment and function description
>sp|P77425|ALLC_ECOLI Allantoate amidohydrolase OS=Escherichia coli (strain K12) GN=allC PE=1 SV=1 Back     alignment and function description
>sp|A0QZE3|Y3995_MYCS2 Putative hydrolase MSMEG_3995/MSMEI_3903 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3995 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query275
224107899 442 predicted protein [Populus trichocarpa] 0.978 0.608 0.768 1e-106
225432949 474 PREDICTED: N-carbamoyl-L-amino acid hydr 0.978 0.567 0.768 1e-106
297737174 441 unnamed protein product [Vitis vinifera] 0.978 0.609 0.768 1e-106
356576493 460 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.978 0.584 0.728 1e-104
363807862 464 uncharacterized protein LOC100797579 pre 0.978 0.579 0.710 1e-103
357441031 499 N-carbamoyl-L-amino acid hydrolase [Medi 0.963 0.531 0.648 2e-99
108862916 484 amidase, hydantoinase/carbamoylase famil 0.978 0.555 0.710 2e-97
115489416 418 Os12g0597500 [Oryza sativa Japonica Grou 0.978 0.643 0.710 2e-97
222617408 452 hypothetical protein OsJ_36749 [Oryza sa 0.978 0.595 0.710 2e-97
108862917371 amidase, hydantoinase/carbamoylase famil 0.978 0.725 0.710 3e-97
>gi|224107899|ref|XP_002314646.1| predicted protein [Populus trichocarpa] gi|222863686|gb|EEF00817.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/276 (76%), Positives = 233/276 (84%), Gaps = 7/276 (2%)

Query: 5   CLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVD 64
            LG I+ IN++ RSGFKP+RSLE ++FTSEEP R+GI CLGS LLAG E+LA+ L +TVD
Sbjct: 122 VLGAIEAINVLKRSGFKPKRSLEVVLFTSEEPTRFGIGCLGSRLLAGSEALAEALKTTVD 181

Query: 65  GQNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIA 124
           GQNISFL AARSAG+AK+ +D+SSVFLK+GSYSAFVEL IEQG ILE EG SI IVTAIA
Sbjct: 182 GQNISFLEAARSAGYAKEQDDISSVFLKEGSYSAFVELHIEQGPILEAEGLSIGIVTAIA 241

Query: 125 ASASIKVDFEGNEGHAGAVLMPN----SLAAAEVALAVEKHVLESGSIDTVGTVGILELH 180
           A AS+KVDFEGN GHAGAVLMPN     LAAAE+ALAVEKHVL SGSIDTVGTVGILELH
Sbjct: 242 APASLKVDFEGNGGHAGAVLMPNRNDAGLAAAELALAVEKHVLGSGSIDTVGTVGILELH 301

Query: 181 SGAINSIPSKSHLEI---DIDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPAL 237
            GAINSIPSKSH+EI   DIDEKRR  VIEKIHQSA TIA  RGV LSEFKIVNQDPPAL
Sbjct: 302 PGAINSIPSKSHVEIDTRDIDEKRRNDVIEKIHQSAATIASKRGVRLSEFKIVNQDPPAL 361

Query: 238 SDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273
           SD+S+I   E A KELNLT+K MISRAYHDS FMAR
Sbjct: 362 SDKSVIEAMEAASKELNLTHKLMISRAYHDSLFMAR 397

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225432949|ref|XP_002284376.1| PREDICTED: N-carbamoyl-L-amino acid hydrolase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297737174|emb|CBI26375.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576493|ref|XP_003556365.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized hydrolase HI_0588-like [Glycine max] Back     alignment and taxonomy information
>gi|363807862|ref|NP_001242443.1| uncharacterized protein LOC100797579 precursor [Glycine max] gi|255641064|gb|ACU20811.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357441031|ref|XP_003590793.1| N-carbamoyl-L-amino acid hydrolase [Medicago truncatula] gi|355479841|gb|AES61044.1| N-carbamoyl-L-amino acid hydrolase [Medicago truncatula] Back     alignment and taxonomy information
>gi|108862916|gb|ABA99240.2| amidase, hydantoinase/carbamoylase family protein, expressed [Oryza sativa Japonica Group] gi|218187183|gb|EEC69610.1| hypothetical protein OsI_38984 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|115489416|ref|NP_001067195.1| Os12g0597500 [Oryza sativa Japonica Group] gi|113649702|dbj|BAF30214.1| Os12g0597500, partial [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|222617408|gb|EEE53540.1| hypothetical protein OsJ_36749 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|108862917|gb|ABA99241.2| amidase, hydantoinase/carbamoylase family protein, expressed [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query275
TAIR|locus:2158342476 UAH "ureidoglycolate amidohydr 0.974 0.563 0.602 1.2e-72
UNIPROTKB|B9RTE0349 RCOM_0908830 "N-carbamoyl-L-am 0.690 0.544 0.592 2.5e-49
UNIPROTKB|Q53389409 amaB "N-carbamoyl-L-amino acid 0.952 0.640 0.25 1.1e-13
UNIPROTKB|Q4KAF2426 PFL_3679 "N-carbamyl-L-amino a 0.363 0.234 0.259 2.3e-06
UNIPROTKB|Q4K949409 PFL_4137 "N-carbamyl-L-amino a 0.512 0.344 0.236 5.6e-05
TIGR_CMR|SPO_3304394 SPO_3304 "amidase, hydantoinas 0.92 0.642 0.241 8.6e-05
UNIPROTKB|Q4KDM6425 PFL_2550 "N-carbamyl-L-amino a 0.363 0.235 0.259 0.00019
TAIR|locus:2158342 UAH "ureidoglycolate amidohydrolase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 167/277 (60%), Positives = 190/277 (68%)

Query:     6 LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTV-D 64
             LG I+ IN++ RSGFKP+RSLE I+FTSEEP R+GISCLGS LLAG + LA+ L +TV D
Sbjct:   155 LGAIEAINVLKRSGFKPKRSLEIILFTSEEPTRFGISCLGSRLLAGSKELAEALKTTVVD 214

Query:    65 GQNISFLHAARSAGHAK-KHNDLSSVFLKKGSYSAFVXXXXXXXXXXXXXXXXXXXXXXX 123
             GQN+SF+ AARSAG+A+ K +DLSSVFLKKGSY AF+                       
Sbjct:   215 GQNVSFIEAARSAGYAEDKDDDLSSVFLKKGSYFAFLELHIEQGPILEDEGLDIGVVTAI 274

Query:   124 XXXXXXKVDFEGNEGHAGAVLMP--NSXXXXXXXXXXXXXXXX--SGSIDTVGTVGILEL 179
                   KV+FEGN GHAGAVLMP  N                   S SIDTVGTVGILEL
Sbjct:   275 AAPASLKVEFEGNGGHAGAVLMPYRNDAGLAAAELALAVEKHVLESESIDTVGTVGILEL 334

Query:   180 HSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPA 236
             H GAINSIPSKSHLEID   IDE RR TVI+KI +SA TIAK R V LSEFKIVNQDPPA
Sbjct:   335 HPGAINSIPSKSHLEIDTRDIDEARRNTVIKKIQESANTIAKKRKVKLSEFKIVNQDPPA 394

Query:   237 LSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR 273
             LSD+ +I +   A  ELNL++K MISRAYHDS FMAR
Sbjct:   395 LSDKLVIKKMAEAATELNLSHKMMISRAYHDSLFMAR 431
GO:0005739 "mitochondrion" evidence=ISM
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0016787 "hydrolase activity" evidence=IEA
GO:0016813 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines" evidence=IEA
GO:0047652 "allantoate deiminase activity" evidence=IDA
GO:0000256 "allantoin catabolic process" evidence=IDA
GO:0004848 "ureidoglycolate hydrolase activity" evidence=IDA
GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA
GO:0009086 "methionine biosynthetic process" evidence=RCA
UNIPROTKB|B9RTE0 RCOM_0908830 "N-carbamoyl-L-amino acid hydrolase, putative" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
UNIPROTKB|Q53389 amaB "N-carbamoyl-L-amino acid hydrolase" [Geobacillus stearothermophilus (taxid:1422)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KAF2 PFL_3679 "N-carbamyl-L-amino acid amidohydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q4K949 PFL_4137 "N-carbamyl-L-amino acid amidohydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3304 SPO_3304 "amidase, hydantoinase/carbamoylase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KDM6 PFL_2550 "N-carbamyl-L-amino acid amidohydrolase" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
cd03884399 cd03884, M20_bAS, M20 Peptidase beta-alanine synth 1e-67
PRK09290413 PRK09290, PRK09290, allantoate amidohydrolase; Rev 6e-54
PRK12890414 PRK12890, PRK12890, allantoate amidohydrolase; Rev 1e-45
PRK12893412 PRK12893, PRK12893, allantoate amidohydrolase; Rev 5e-43
TIGR01879400 TIGR01879, hydantase, amidase, hydantoinase/carbam 2e-38
PRK12892412 PRK12892, PRK12892, allantoate amidohydrolase; Rev 9e-30
PRK13590591 PRK13590, PRK13590, putative bifunctional OHCU dec 7e-25
PRK13799591 PRK13799, PRK13799, unknown domain/N-carbamoyl-L-a 3e-22
PRK12891414 PRK12891, PRK12891, allantoate amidohydrolase; Rev 4e-19
TIGR03176406 TIGR03176, AllC, allantoate amidohydrolase 7e-17
pfam01546310 pfam01546, Peptidase_M20, Peptidase family M20/M25 3e-14
COG0624409 COG0624, ArgE, Acetylornithine deacetylase/Succiny 1e-11
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 4e-05
pfam07687107 pfam07687, M20_dimer, Peptidase dimerisation domai 2e-04
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 7e-04
>gnl|CDD|193505 cd03884, M20_bAS, M20 Peptidase beta-alanine synthase, an amidohydrolase Back     alignment and domain information 
 Score =  214 bits (548), Expect = 1e-67
 Identities = 96/265 (36%), Positives = 137/265 (51%), Gaps = 12/265 (4%)

Query: 17  RSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARS 76
            +G +P R +E + FT+EE  R+G S LGS  LAG   L  DL++  D   ++   A  +
Sbjct: 101 EAGIRPPRPIEVVAFTNEEGSRFGPSLLGSRALAGTLDLE-DLLALRDADGVTLAEALAA 159

Query: 77  AGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGN 136
            G+      L+      G  +A++EL IEQG +LE EG  I +VT IA    ++V   G 
Sbjct: 160 IGYDP--ERLAEAARDPGDIAAYLELHIEQGPVLEAEGLPIGVVTGIAGIRRLRVTVTGE 217

Query: 137 EGHAGAVLMPN----SLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSH 192
            GHAG   M       LAAAE+ LAVE+   E G  D V TVG LE+   A+N IP +  
Sbjct: 218 AGHAGTTPMALRRDALLAAAELILAVERIARELGD-DLVATVGRLEVEPNAVNVIPGEVE 276

Query: 193 LEIDI---DEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVA 249
             +DI   D+     ++  I  +A  IA  RGV + E + ++  PP   D  ++   E A
Sbjct: 277 FTLDIRSPDDAVLDALVAAIRAAAEEIAARRGVEV-EIERLSDSPPVPFDPELVAALEAA 335

Query: 250 LKELNLTYKFMISRAYHDSPFMARY 274
            + L L+Y+ + S A HD+  MAR 
Sbjct: 336 AEALGLSYRRLPSGAGHDAMIMARI 360

Peptidase M20 family, beta-alanine synthase (bAS; N-carbamoyl-beta-alanine amidohydrolase and beta-ureidopropionase; EC 3.5.1.6) subfamily. bAS is an amidohydrolase and is the final enzyme in the pyrimidine catabolic pathway, which is involved in the regulation of the cellular pyrimidine pool. The bAS catalyzes the irreversible hydrolysis of the N-carbamylated beta-amino acids to beta-alanine or aminoisobutyrate under the release of carbon dioxide and ammonia. Also included in this subfamily is allantoate amidohydrolase (allantoate deiminase), which catalyzes the conversion of allantoate to (S)-ureidoglycolate, one of the crucial alternate steps in purine metabolism. It is possible that these two enzymes arose from the same ancestral peptidase that evolved into two structurally related enzymes with distinct catalytic properties and biochemical roles within the cell. Yeast requires beta-alanine as a precursor of pantothenate and coenzyme A biosynthesis, but generates it mostly via degradation of spermine. Disorders in pyrimidine degradation and beta-alanine metabolism caused by beta-ureidopropionase deficiency (UPB1 gene) in humans are normally associated with neurological disorders. Length = 399
>gnl|CDD|236456 PRK09290, PRK09290, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|237248 PRK12890, PRK12890, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|237250 PRK12893, PRK12893, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|200138 TIGR01879, hydantase, amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>gnl|CDD|183817 PRK12892, PRK12892, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|184168 PRK13590, PRK13590, putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|106740 PRK13799, PRK13799, unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|237249 PRK12891, PRK12891, allantoate amidohydrolase; Reviewed Back     alignment and domain information
>gnl|CDD|234137 TIGR03176, AllC, allantoate amidohydrolase Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|223697 COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|219515 pfam07687, M20_dimer, Peptidase dimerisation domain Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 275
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 100.0
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 100.0
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 100.0
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 100.0
PRK12891414 allantoate amidohydrolase; Reviewed 100.0
PRK12892412 allantoate amidohydrolase; Reviewed 100.0
PRK12890414 allantoate amidohydrolase; Reviewed 100.0
PRK12893412 allantoate amidohydrolase; Reviewed 100.0
PRK09290413 allantoate amidohydrolase; Reviewed 100.0
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 99.96
PLN02693437 IAA-amino acid hydrolase 99.95
PRK07338402 hypothetical protein; Provisional 99.94
PLN02280478 IAA-amino acid hydrolase 99.94
PRK07473376 carboxypeptidase; Provisional 99.94
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 99.93
TIGR01883361 PepT-like peptidase T-like protein. This model rep 99.93
TIGR01891363 amidohydrolases amidohydrolase. This model represe 99.93
PRK06133410 glutamate carboxypeptidase; Reviewed 99.93
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 99.93
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 99.91
PRK06915422 acetylornithine deacetylase; Validated 99.91
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 99.91
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 99.9
PRK00466346 acetyl-lysine deacetylase; Validated 99.9
PRK05469408 peptidase T; Provisional 99.89
PRK13983400 diaminopimelate aminotransferase; Provisional 99.89
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 99.89
PRK08652347 acetylornithine deacetylase; Provisional 99.89
PRK13381404 peptidase T; Provisional 99.89
TIGR01882410 peptidase-T peptidase T. This model represents a t 99.88
PRK07522385 acetylornithine deacetylase; Provisional 99.87
PRK06837427 acetylornithine deacetylase; Provisional 99.87
PRK09133472 hypothetical protein; Provisional 99.87
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 99.87
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 99.86
PRK08262486 hypothetical protein; Provisional 99.86
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 99.85
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 99.85
PRK05111383 acetylornithine deacetylase; Provisional 99.85
PRK07906426 hypothetical protein; Provisional 99.85
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 99.84
PRK13004399 peptidase; Reviewed 99.84
PRK08737364 acetylornithine deacetylase; Provisional 99.83
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 99.83
TIGR01893 477 aa-his-dipept aminoacyl-histidine dipeptidase. 99.83
TIGR01900373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 99.82
PRK04443348 acetyl-lysine deacetylase; Provisional 99.81
PRK06446436 hypothetical protein; Provisional 99.8
KOG2275420 consensus Aminoacylase ACY1 and related metalloexo 99.8
PRK07318466 dipeptidase PepV; Reviewed 99.79
PRK08596421 acetylornithine deacetylase; Validated 99.79
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 99.79
PRK08201456 hypothetical protein; Provisional 99.78
PRK09104464 hypothetical protein; Validated 99.75
PRK07907449 hypothetical protein; Provisional 99.75
PRK07205444 hypothetical protein; Provisional 99.74
PRK07079469 hypothetical protein; Provisional 99.73
TIGR01886466 dipeptidase dipeptidase PepV. This model represent 99.73
PRK06156520 hypothetical protein; Provisional 99.72
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 99.63
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 99.59
PRK15026 485 aminoacyl-histidine dipeptidase; Provisional 99.58
PRK08554438 peptidase; Reviewed 99.52
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.33
KOG2276473 consensus Metalloexopeptidases [Amino acid transpo 97.7
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 97.62
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 97.19
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 97.19
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 97.15
COG4187 553 RocB Arginine degradation protein (predicted deacy 96.97
COG2234435 Iap Predicted aminopeptidases [General function pr 95.8
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 95.7
TIGR03106343 trio_M42_hydro hydrolase, peptidase M42 family. Th 94.94
COG1363355 FrvX Cellulase M and related proteins [Carbohydrat 93.75
PF05450234 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastri 93.48
PF05343292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 93.03
TIGR03107350 glu_aminopep glutamyl aminopeptidase. This model r 92.22
PRK09961344 exoaminopeptidase; Provisional 92.12
PRK09864356 putative peptidase; Provisional 91.32
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 90.66
COG4882486 Predicted aminopeptidase, Iap family [General func 90.33
KOG2195702 consensus Transferrin receptor and related protein 90.18
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information 
Probab=100.00  E-value=1.5e-50  Score=369.70  Aligned_cols=264  Identities=26%  Similarity=0.363  Sum_probs=233.3

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCC
Q 043727            2 FKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAK   81 (275)
Q Consensus         2 ~~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~   81 (275)
                      .+||+++|++++.|++++++|++||+|++|++||++|||++++||+++.|.+. .+.+..++|.+|+|+.|+|+++||++
T Consensus        90 ~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~-~~~~~~~~d~~g~~~~~~~~~~g~~~  168 (406)
T TIGR03176        90 QFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAK-PEDVRTIEDAKGIKFVDAMHACGFDL  168 (406)
T ss_pred             hhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCC-HHHHHhCcCCCCCCHHHHHHHcCCCc
Confidence            48999999999999999999999999999999999999999999999999776 34455678999999999999999976


Q ss_pred             CCCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchhhH----HHHHHHHHHH
Q 043727           82 KHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLMPN----SLAAAEVALA  157 (275)
Q Consensus        82 ~~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~~g----i~aaa~~i~~  157 (275)
                      +  .++...   .++++|||+||||||+||..+.++|+|++++|..||+|+++|+++|+|++|+.+    +.++++++..
T Consensus       169 ~--~~~~~~---~~~~~~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~  243 (406)
T TIGR03176       169 R--KAPTVR---DDIKAFVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQ  243 (406)
T ss_pred             c--cccccc---cccceEEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHH
Confidence            4  233322   379999999999999999999999999999999999999999999999888853    9999999999


Q ss_pred             HHHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCC
Q 043727          158 VEKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDP  234 (275)
Q Consensus       158 l~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p  234 (275)
                      ++++..+.. +..++|||+|+++|++.|+||++|++++|   ++.+.++.+.++|++.+++++..+++++ +++.....+
T Consensus       244 l~~~~~~~~-~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~-ei~~~~~~~  321 (406)
T TIGR03176       244 SIERAKEIG-DPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITI-DIDLWMDEA  321 (406)
T ss_pred             HHHHHHhcC-CCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeE-EEEEEecCC
Confidence            988765432 45799999999767899999999999999   8889999999999999999999999999 888655556


Q ss_pred             CCCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727          235 PALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR  273 (275)
Q Consensus       235 ~~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~  273 (275)
                      |...|+++++.+++++++.+.+....+++++||+++|++
T Consensus       322 p~~~d~~lv~~l~~a~~~~~~~~~~~~sggg~Da~~~~~  360 (406)
T TIGR03176       322 PVPMNKEIVAIIEQLAKAEKLNYRLMHSGAGHDAQIFAP  360 (406)
T ss_pred             CCCCCHHHHHHHHHHHHHcCCCceecCcccHHHHHHHHH
Confidence            677789999999999998876656678889999999975

This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>COG2234 Iap Predicted aminopeptidases [General function prediction only] Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only] Back     alignment and domain information
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
3n5f_A408 Crystal Structure Of L-N-Carbamoylase From Geobacil 4e-13
>pdb|3N5F|A Chain A, Crystal Structure Of L-N-Carbamoylase From Geobacillus Stearothermophilus Cect43 Length = 408 Back     alignment and structure 
Iteration: 1

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 104/268 (38%), Gaps = 10/268 (3%)
Query: 6   LGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDG 65
           L  ++++  +   G      +E + FT EE  R+    +GS  +AG  +L  + +   D 
Sbjct: 96  LAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAG--TLPPEALECRDA 153
Query: 66  QNISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVXXXXXXXXXXXXXXXXXXXXXXXXX 125
           + IS   A + AG     + L     K G+  A+V                         
Sbjct: 154 EGISLAEAMKQAG--LDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAG 211
Query: 126 XXXXKVDFEGNEGHAGAVLMP--NSXXXXXXXXXXXXXXXXSGSIDTVGTVGILELHSGA 183
               K   EG   HAGA  M                       +  TVGTVG L ++ G 
Sbjct: 212 LIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARRTGTTVGTVGQLHVYPGG 271
Query: 184 INSIPSKSHLEIDIDEKR---RKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDR 240
           IN IP +    +D+ + +   R  V + I   A TIAK R V ++  ++  + PP L   
Sbjct: 272 INVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERL-QEMPPVLCSD 330
Query: 241 SIILEAEVALKELNLTYKFMISRAYHDS 268
            +   AE A ++L     ++ S A HDS
Sbjct: 331 EVKRAAEAACQKLGYPSFWLPSGAAHDS 358

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 1e-71
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 9e-70
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 2e-62
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 6e-08
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 2e-06
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 2e-05
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 3e-04
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Length = 408 Back     alignment and structure
 Score =  224 bits (574), Expect = 1e-71
 Identities = 87/264 (32%), Positives = 125/264 (47%), Gaps = 14/264 (5%)

Query: 17  RSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARS 76
             G      +E + FT EE  R+    +GS  +AG   L  + +   D + IS   A + 
Sbjct: 107 EHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGT--LPPEALECRDAEGISLAEAMKQ 164

Query: 77  AGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGN 136
           AG     + L     K G+  A+VEL IEQG +LEE G  + IVT IA    +K   EG 
Sbjct: 165 AGLD--PDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGK 222

Query: 137 EGHAGAVLMPN----SLAAAEVALAVEKHVLESGSIDTVGTVGILELHSGAINSIPSKSH 192
             HAGA  M        AAA++ + +E+    +G   TVGTVG L ++ G IN IP +  
Sbjct: 223 AEHAGATPMSLRRDPMAAAAQIIIVIEEEARRTG--TTVGTVGQLHVYPGGINVIPERVE 280

Query: 193 LEIDI---DEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPPALSDRSIILEAEVA 249
             +D+     + R  V + I   A TIAK R V +   + + + PP L    +   AE A
Sbjct: 281 FVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRV-TTERLQEMPPVLCSDEVKRAAEAA 339

Query: 250 LKELNLTYKFMISRAYHDSPFMAR 273
            ++L     ++ S A HDS  +A 
Sbjct: 340 CQKLGYPSFWLPSGAAHDSVQLAP 363
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Length = 423 Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Length = 474 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Length = 396 Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Length = 373 Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Length = 434 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 100.0
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 100.0
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 100.0
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 99.97
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 99.96
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 99.95
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 99.95
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 99.95
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 99.95
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 99.95
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 99.94
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 99.93
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 99.92
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 99.92
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 99.91
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 99.9
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 99.9
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 99.89
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 99.88
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 99.88
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 99.88
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 99.87
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 99.86
2qyv_A487 XAA-His dipeptidase; YP_718209.1, structural genom 99.83
3khx_A492 Putative dipeptidase sacol1801; DAPE, metallopepti 99.82
3mru_A490 Aminoacyl-histidine dipeptidase; metalloprotease, 99.8
1lfw_A470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 99.8
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 97.62
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 97.61
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 97.58
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 97.57
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 97.44
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 97.37
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 97.36
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 97.35
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 97.09
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 97.07
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 97.04
4f9u_A312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 97.03
3kas_A640 Transferrin receptor protein 1; transferrin recept 96.86
3fed_A707 Glutamate carboxypeptidase III; metallopeptidase, 96.82
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 96.68
2gre_A349 Deblocking aminopeptidase; structural genomi prote 96.64
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 96.22
1vhe_A373 Aminopeptidase/glucanase homolog; structural genom 96.13
2wyr_A332 Cobalt-activated peptidase TET1; hydrolase, large 96.08
1y0y_A353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 95.52
2fvg_A340 Endoglucanase; TM1049, structural genomics, joint 94.98
1vho_A346 Endoglucanase; structural genomics, unknown functi 91.66
1ylo_A348 Hypothetical protein SF2450; structural genomics, 91.49
1q7l_B88 Aminoacylase-1; catalysis, enzyme dimerization, si 90.28
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 88.96
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 85.7
2vpu_A354 TET3, 354AA long hypothetical operon protein FRV; 82.92
1ylo_A348 Hypothetical protein SF2450; structural genomics, 82.71
3kl9_A355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 80.81
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
Probab=100.00  E-value=8.4e-42  Score=311.57  Aligned_cols=264  Identities=33%  Similarity=0.470  Sum_probs=234.9

Q ss_pred             hHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhhhhcccCCCCCcHHHHHHHcCCCCC
Q 043727            3 KLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKDLISTVDGQNISFLHAARSAGHAKK   82 (275)
Q Consensus         3 ~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~g~~~~   82 (275)
                      .|++++|++++.|++.+.+++++|.|+++++||++|||.|+.||+.+.+.++ ++.+ .++|.+|+++.+++.+.|+.++
T Consensus        93 ~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~-~~~~-~~~~~~G~~~~~~l~~~G~~~~  170 (408)
T 3n5f_A           93 LGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLP-PEAL-ECRDAEGISLAEAMKQAGLDPD  170 (408)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCC-GGGG-SCBCTTCCBHHHHHHHTTCCGG
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCC-HHHh-hccCCCCCCHHHHHHHhCCChh
Confidence            5899999999999999988999999999999999999999999999998876 4555 6678899999999999999753


Q ss_pred             CCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCCCcchh-hH---HHHHHHHHHHH
Q 043727           83 HNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHAGAVLM-PN---SLAAAEVALAV  158 (275)
Q Consensus        83 ~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Hag~~p~-~g---i~aaa~~i~~l  158 (275)
                        .+....+++.++++++++|++||+++|+.+.+++++.+++|..+|+|+++|+++|+|+.|+ .+   |.++++++.+|
T Consensus       171 --~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l  248 (408)
T 3n5f_A          171 --RLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVI  248 (408)
T ss_dssp             --GGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHH
T ss_pred             --hhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHH
Confidence              2333333455899999999999999998888999999999999999999999999977895 55   99999999999


Q ss_pred             HHHHHhhCCCCeEEEEEEEEeeCCCCceeCceEEEEEe---CCHhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEecCCCC
Q 043727          159 EKHVLESGSIDTVGTVGILELHSGAINSIPSKSHLEID---IDEKRRKTVIEKIHQSAITIAKNRGVTLSEFKIVNQDPP  235 (275)
Q Consensus       159 ~~~~~~~~~~~~~~tvg~i~~g~~~~NvIP~~a~~~~d---~~~e~~~~~~~~i~~~~~~~~~~~g~~~~~i~~~~~~p~  235 (275)
                      +++.++.+  ..++|+|.|++|+++.|+||++|++.+|   ++.+..+++.++|+++++.++..+|+++ ++++...+||
T Consensus       249 ~~~~~~~~--~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~-~i~~~~~~p~  325 (408)
T 3n5f_A          249 EEEARRTG--TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRV-TTERLQEMPP  325 (408)
T ss_dssp             HHHHHHHS--SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEE-EEEEEEEECC
T ss_pred             HHHHHhcC--CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeE-EEEEecCCCC
Confidence            98875543  7899999999876899999999999999   8899999999999999999988999999 9999888999


Q ss_pred             CCCCHHHHHHHHHHHHHhCCCccccCCCCcchHHhhhc
Q 043727          236 ALSDRSIILEAEVALKELNLTYKFMISRAYHDSPFMAR  273 (275)
Q Consensus       236 ~~~d~~l~~~~~~~~~~~g~~~~~~~~~~g~Da~~~~~  273 (275)
                      +.+|+++++.++++++++|.+....+++++||+++|.+
T Consensus       326 ~~~d~~l~~~~~~a~~~~g~~~~~~~~~ggtD~~~~~~  363 (408)
T 3n5f_A          326 VLCSDEVKRAAEAACQKLGYPSFWLPSGAAHDSVQLAP  363 (408)
T ss_dssp             EECCHHHHHHHHHHHHHHTCCCCEEEESSCCTTTTTTT
T ss_pred             cCCCHHHHHHHHHHHHHcCCCcccCCCcCchHHHHHHH
Confidence            99999999999999998887665667789999999875
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 275
d1r3na1322 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta- 1e-13
d1z2la1293 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydro 2e-09
d1z2la2117 d.58.19.1 (A:213-329) Allantoate amidohydrolase Al 5e-08
d1r3na2116 d.58.19.1 (A:248-363) Peptidase-like beta-alanine 6e-08
d1cg2a2113 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudom 1e-04
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 322 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Peptidase-like beta-alanine synthase, catalytic domain
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

 Score = 67.4 bits (164), Expect = 1e-13
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 6/142 (4%)

Query: 9   IDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESL--AKDLISTVDGQ 66
           ++++     + + P   +  +++ +EE  R+  SC GS + +   SL  A  L+S  + +
Sbjct: 117 LEVLRTFKDNNYVPNYDVCVVVWFNEEGARFARSCTGSSVWSHDLSLEEAYGLMSVGEDK 176

Query: 67  NISFLHAARSAGHAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAAS 126
             S   + ++ G+            K+    A  EL IEQG ILE+E  +I IVT + A 
Sbjct: 177 PESVYDSLKNIGYIGDT----PASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAV 232

Query: 127 ASIKVDFEGNEGHAGAVLMPNS 148
              +V  E     A A    + 
Sbjct: 233 NFHEVCIECVSRSAFAQFKKDQ 254
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Length = 293 Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Length = 117 Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 116 Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Length = 113 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
d1r3na1322 Peptidase-like beta-alanine synthase, catalytic do 99.95
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 99.93
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.84
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.82
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 99.78
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 99.78
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 99.78
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 99.68
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 98.68
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 98.34
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 97.8
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 97.74
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 97.52
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 97.39
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 97.21
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 97.2
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 97.16
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 97.14
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 97.09
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 96.96
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 96.57
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 95.83
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 95.61
d1fnoa3113 Peptidase T (tripeptidase) {Salmonella typhimurium 95.59
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 95.53
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 93.72
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 92.79
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 92.7
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 88.61
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 81.27
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: Peptidase-like beta-alanine synthase, catalytic domain
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

Probab=99.95  E-value=3e-29  Score=214.78  Aligned_cols=134  Identities=25%  Similarity=0.329  Sum_probs=120.8

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCCCceEEEEccCCCCCCCCCCcchhhhhhccCCchhh---hhcccCCCCCcHHHHHHHcC
Q 043727            2 FKLCLGDIDIINIVIRSGFKPRRSLEFIMFTSEEPKRYGISCLGSLLLAGIESLAKD---LISTVDGQNISFLHAARSAG   78 (275)
Q Consensus         2 ~~Gv~a~l~a~~~L~~~~~~~~~~i~~~~~~dEE~~~fg~~~~Gs~~~~~~~~~~~~---~~~~~~~~g~~~~e~~~~~g   78 (275)
                      .+||+++|++++.|+++++++++||+|++|++||++|||.+++||++++|.++ .+.   +.+.+|.+|+++.|+|+++|
T Consensus       110 ~lGV~a~Levl~~l~e~~~~~~~~i~vv~f~~EEg~rFg~~~lGS~~~~G~l~-~~~~~~l~~~~d~~G~~l~~al~~~G  188 (322)
T d1r3na1         110 ILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNEEGARFARSCTGSSVWSHDLS-LEEAYGLMSVGEDKPESVYDSLKNIG  188 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCSSCEEEEECSCSSCSSBSSTTHHHHHHTTSSC-HHHHHTCBBSSCSSCCBHHHHHHHTT
T ss_pred             ccchHHHHHHHHHHhhhccCCCCCcEEEEeeccccccccccccccccccCCCC-HHHHhhhhccccchhhhHHHHHHhcC
Confidence            47999999999999999999999999999999999999999999999999987 333   33446889999999999999


Q ss_pred             CCCCCCCcchhhccCCCceEEEEeecccccccccCCCceEEEEeeecceEEEEEEEecCCCC
Q 043727           79 HAKKHNDLSSVFLKKGSYSAFVELQIEQGLILEEEGTSIVIVTAIAASASIKVDFEGNEGHA  140 (275)
Q Consensus        79 ~~~~~~~~~~~~~~~~~v~~~~~~Hie~g~~le~~~~~~gvv~~~~G~~~~~i~i~G~~~Ha  140 (275)
                      +.++.    .+.+++.++.+|||+||||||+||..+.++|||+++.|..||+|+++|.+.|+
T Consensus       189 ~~~~~----~~~~~~~~i~a~lElHIEQGpvLe~~~~~IGVVtgI~G~~~~~v~~~g~a~~~  246 (322)
T d1r3na1         189 YIGDT----PASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAVNFHEVCIECVSRSA  246 (322)
T ss_dssp             CCCSB----CCSTTTSCCSEEEEEEECSSSHHHHTTCSEEEEEEECCEECCHHHHHHHHHHH
T ss_pred             ccccc----cccccccceeEEEEEEEcCChhHHHCCCCeeccccccceeEEEeeccccccch
Confidence            98753    23455678999999999999999999999999999999999999999988886
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure