Citrus Sinensis ID: 043734

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
MALSGKFLFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHccccccccEEEEEEEEEEEcccccccEEEEcccccccccccccccccEEEEEEccccccccccccEEEEEEEEEEEEccccccEEEEEEEEEEEccccccccEEEEEEccccccccEEEEEEccccEEEEEEEEEEEEEEEcccccEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccEEEEEccccccccccccccccEEEEEcccccccccccccccccccEEEEEccccccEEEEEEEEEEEEcccccccEEEEEccccHHHHHccccEEcccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEc
Coil and Loop (DISEMBL)
MALSGKFLFLVGVLTLFCTTEAMKSKVTRMQFYMhdivsgptatavpvagrsnftspdpikamfgsvfvmdnpltmtpdpnstviGRAQGIYAMSSQQDEFSLLMTLTygftsgpyngssfsvlgrnpvmsevrempivggtGIFRLARGYClaktssmdqmDAVIGYNVTLLHY
Flexible Loop (DISEMBL)
MALSGKFLFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAktssmdqmdaVIGYNVTLLHY
Low Complexity Region (SEG)
MALSGKFLFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY
Disordered region (IsUnstruct)
****GKFLFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTM*****STVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLL**
Disordered Region (DISOPRED)
***SGKFLFLVGVLTLFCTT****SKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY
Disordered Region (DISEMBL)
MALSGKFLFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY
Disordered Region (DISPRO)
MALSGKFLFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALSGKFLFLVGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
P13240	184	Disease resistance respon	N/A	no	0.885	0.842	0.264	8e-11

>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2

 Score = 66.6 bits (161), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 15/170 (8%)

Query: 3   LSGKFLFLVGVLTLFCTTEAMKSK------VTRMQFYMHDIV----SGPTATAVPVAGRS 52
           +  K L L   + LF  + A+ +K         + FY HDI+    +   AT+  VA   
Sbjct: 1   MGSKLLVLFVFVMLFALSSAIPNKRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPE 60

Query: 53  --NFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYG 110
             + T   P ++ FG++ V D+P+T++   +S  +GRAQG Y +   ++ ++  ++ T+ 
Sbjct: 61  GVSLTKLAP-QSHFGNIIVFDDPITLSHSLSSKQVGRAQGFY-IYDTKNTYTSWLSFTFV 118

Query: 111 FTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMD 160
             S  + G + +  G +P++++ R++ + GGTG F + RG     T + +
Sbjct: 119 LNSTHHQG-TITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITTDAFE 167

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
255547099	176	Disease resistance response protein, put	0.891	0.886	0.839	3e-75
449522292	183	PREDICTED: uncharacterized LOC101212940	0.994	0.950	0.721	4e-68
449440887	183	PREDICTED: uncharacterized protein LOC10	0.994	0.950	0.710	2e-67
225455712	178	PREDICTED: disease resistance response p	1.0	0.983	0.707	4e-66
224058943	149	predicted protein [Populus trichocarpa]	0.845	0.993	0.733	9e-58
88771147	184	dirigent-like protein pDIR12 [Picea glau	0.845	0.804	0.559	2e-40
310975328	184	dirigent-like protein [Picea omorika] gi	0.845	0.804	0.559	2e-40
310975322	184	dirigent-like protein [Picea mariana] gi	0.845	0.804	0.559	3e-40
224105209	184	predicted protein [Populus trichocarpa]	0.914	0.869	0.508	5e-40
310975316	184	dirigent-like protein [Picea abies] gi|3	0.845	0.804	0.552	5e-40

>gi|255547099|ref|XP_002514607.1| Disease resistance response protein, putative [Ricinus communis] gi|223546211|gb|EEF47713.1| Disease resistance response protein, putative [Ricinus communis]

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 131/156 (83%), Positives = 147/156 (94%)

Query: 20  TEAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPD 79
           TEA+KSK+TR+QFYMHDIV GP  TAVPVAGR+NFTS DPI A FGS+FV+DNPLT++PD
Sbjct: 21  TEALKSKITRVQFYMHDIVGGPNPTAVPVAGRTNFTSQDPIAASFGSIFVIDNPLTVSPD 80

Query: 80  PNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIV 139
           PNSTV+GRAQGIYAMSSQQ EFSLLMTLTYGF +GPYNGS+FSV+GRNPVMSEVREMP+V
Sbjct: 81  PNSTVVGRAQGIYAMSSQQKEFSLLMTLTYGFITGPYNGSTFSVVGRNPVMSEVREMPVV 140

Query: 140 GGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY 175
           GGTGIFRLARGYC+A+T SMDQMDA+IGYNVTLLHY
Sbjct: 141 GGTGIFRLARGYCMARTHSMDQMDAIIGYNVTLLHY 176

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522292|ref|XP_004168161.1| PREDICTED: uncharacterized LOC101212940 [Cucumis sativus]

 Score =  262 bits (669), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 127/176 (72%), Positives = 149/176 (84%), Gaps = 2/176 (1%)

Query: 1   MALSGKFLFL-VGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGR-SNFTSPD 58
           MA+S K L + + +L   C+TEA+   VTR+QFYMHDIVSGP  TA+ VAGR +N+T  D
Sbjct: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYTGTD 60

Query: 59  PIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNG 118
           PI AMFGSVF+MDNPLT+TP+ NST+IGRAQGIYAMSSQQ+EFSLLMTLT+G T G YNG
Sbjct: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSSQQNEFSLLMTLTFGMTGGQYNG 120

Query: 119 SSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLH 174
           SSFSV+GRNP+M+EVREMP+VGGTGIFRL RGYCLA+T S   MDAVIGYNVTL+H
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 176

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440887|ref|XP_004138215.1| PREDICTED: uncharacterized protein LOC101212940 [Cucumis sativus]

 Score =  259 bits (663), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 125/176 (71%), Positives = 148/176 (84%), Gaps = 2/176 (1%)

Query: 1   MALSGKFLFL-VGVLTLFCTTEAMKSKVTRMQFYMHDIVSGPTATAVPVAGR-SNFTSPD 58
           MA+S K L + + +L   C+TEA+   VTR+QFYMHDIVSGP  TA+ VAGR +N+   D
Sbjct: 1   MAVSSKILVISMAILVAVCSTEALDPNVTRIQFYMHDIVSGPNPTAIQVAGRQTNYAGTD 60

Query: 59  PIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNG 118
           PI AMFGSVF+MDNPLT+TP+ NST+IGRAQGIYAMS+QQ+EFSLLMTLT+G T G YNG
Sbjct: 61  PIAAMFGSVFMMDNPLTVTPELNSTLIGRAQGIYAMSAQQNEFSLLMTLTFGMTGGQYNG 120

Query: 119 SSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLH 174
           SSFSV+GRNP+M+EVREMP+VGGTGIFRL RGYCLA+T S   MDAVIGYNVTL+H
Sbjct: 121 SSFSVVGRNPIMNEVREMPVVGGTGIFRLVRGYCLARTFSFRNMDAVIGYNVTLIH 176

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455712|ref|XP_002266825.1| PREDICTED: disease resistance response protein 206 [Vitis vinifera]

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 126/178 (70%), Positives = 149/178 (83%), Gaps = 3/178 (1%)

Query: 1   MALSGKFLFLVGVLTLF-CTTEAMKSK-VTRMQFYMHDIVSGPTATAVPVAGR-SNFTSP 57
           MA++ + +FL+  L    CTTEAMK K VT +QFYMHDIVSGP  TAV VAG+ +N TS 
Sbjct: 1   MAMTSRLVFLIAFLVASSCTTEAMKKKKVTNIQFYMHDIVSGPNPTAVKVAGQLTNSTSS 60

Query: 58  DPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYN 117
           + I + FGS++V+D+PLT TP  NST++GRAQGIYAM+SQQDEFSLLMT+TYGF SG YN
Sbjct: 61  NWIASTFGSIYVIDDPLTATPQMNSTLMGRAQGIYAMASQQDEFSLLMTITYGFVSGRYN 120

Query: 118 GSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY 175
           GSSFSV+GRNPVM+EVREMPIVGGTGIFRLA GYCLA T SM++MDAVIGYN TL+HY
Sbjct: 121 GSSFSVVGRNPVMNEVREMPIVGGTGIFRLASGYCLAHTYSMNEMDAVIGYNATLIHY 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058943|ref|XP_002299656.1| predicted protein [Populus trichocarpa] gi|222846914|gb|EEE84461.1| predicted protein [Populus trichocarpa]

 Score =  228 bits (580), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 110/150 (73%), Positives = 128/150 (85%), Gaps = 2/150 (1%)

Query: 26  KVTRMQFYMHDIVSGPTATAVPVAGRSNFT-SPDPIKAMFGSVFVMDNPLTMTPDPNSTV 84
           K TR+QFYMHD++SGP  T+V VAG  N T SP+   A+FG +++MDNPLT+TPDPNSTV
Sbjct: 1   KATRIQFYMHDVISGPNPTSVRVAGPDNSTISPNATAALFGPIYMMDNPLTVTPDPNSTV 60

Query: 85  IGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGI 144
           +GRAQGIY MSSQ +E SLLM+ T GF SGPYNGS+FSVLGRNP+M+EVREMP+VGGTGI
Sbjct: 61  VGRAQGIYGMSSQ-NELSLLMSFTVGFISGPYNGSTFSVLGRNPIMNEVREMPVVGGTGI 119

Query: 145 FRLARGYCLAKTSSMDQMDAVIGYNVTLLH 174
           FRLARGYCLAKT SM   DA+IGYNVTLLH
Sbjct: 120 FRLARGYCLAKTHSMVGFDAIIGYNVTLLH 149

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|88771147|gb|ABD52123.1| dirigent-like protein pDIR12 [Picea glauca] gi|310975334|gb|ADP55104.1| dirigent-like protein [Picea jezoensis] gi|310975336|gb|ADP55105.1| dirigent-like protein [Picea jezoensis] gi|310975338|gb|ADP55106.1| dirigent-like protein [Picea jezoensis] gi|310975340|gb|ADP55107.1| dirigent-like protein [Picea glauca] gi|310975342|gb|ADP55108.1| dirigent-like protein [Picea glauca] gi|310975344|gb|ADP55109.1| dirigent-like protein [Picea glauca]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 108/152 (71%), Gaps = 4/152 (2%)

Query: 24  KSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNST 83
           + KV+ + FY HDIV+G  ATAV VA  +  T   P    FGSV VMD+ LT  P+  S 
Sbjct: 37  REKVSHLHFYFHDIVAGQNATAVQVAS-APMTKSSPTG--FGSVVVMDDCLTEGPEVTSK 93

Query: 84  VIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTG 143
           V+GRAQGIY +SS Q+ F LLM  T+ F SG YNGS+ +++G+N  + EVREMPIVGG+G
Sbjct: 94  VVGRAQGIY-VSSSQENFHLLMASTFVFESGKYNGSTLAMIGKNAALEEVREMPIVGGSG 152

Query: 144 IFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY 175
           +FRLARGY LA+T S+D   AV+ YNVT+LHY
Sbjct: 153 LFRLARGYALARTHSIDSTTAVVEYNVTVLHY 184

Source: Picea glauca

Species: Picea glauca

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|310975328|gb|ADP55101.1| dirigent-like protein [Picea omorika] gi|310975330|gb|ADP55102.1| dirigent-like protein [Picea omorika] gi|310975332|gb|ADP55103.1| dirigent-like protein [Picea omorika]

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 107/152 (70%), Gaps = 4/152 (2%)

Query: 24  KSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNST 83
           + KV+ + FY HDIV+G  ATAV VA  +  T   P    FGSV VMD+ LT  P+  S 
Sbjct: 37  REKVSHLHFYFHDIVAGQNATAVQVA-SAPMTKSSPTG--FGSVVVMDDCLTEGPEVTSK 93

Query: 84  VIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTG 143
           V+GRAQGIY +SS Q+ F LLM  T+ F SG YNGS+ +++G+N  + EVREMPIVGG+G
Sbjct: 94  VVGRAQGIY-VSSSQENFHLLMASTFVFESGKYNGSTLAMIGKNAALEEVREMPIVGGSG 152

Query: 144 IFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY 175
           +FRLARGY LA T S+D   AV+ YNVT+LHY
Sbjct: 153 LFRLARGYALAHTHSIDSTSAVVEYNVTVLHY 184

Source: Picea omorika

Species: Picea omorika

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|310975322|gb|ADP55098.1| dirigent-like protein [Picea mariana] gi|310975324|gb|ADP55099.1| dirigent-like protein [Picea mariana] gi|310975326|gb|ADP55100.1| dirigent-like protein [Picea mariana]

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/152 (55%), Positives = 107/152 (70%), Gaps = 4/152 (2%)

Query: 24  KSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNST 83
           + KV+ + FY HDIV+G  ATAV VA  +  T   P    FGSV VMD+ LT  P+  S 
Sbjct: 37  REKVSHLHFYFHDIVAGQNATAVQVA-SAPMTKSSPTG--FGSVVVMDDCLTEGPEVTSK 93

Query: 84  VIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTG 143
           V+GRAQGIY +SS Q+ F LLM  T+ F SG YNGS+ +++G+N  + EVREMPIVGG+G
Sbjct: 94  VVGRAQGIY-VSSSQENFHLLMASTFVFESGKYNGSTLAMIGKNAALEEVREMPIVGGSG 152

Query: 144 IFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY 175
           +FRLARGY LA T S+D   AV+ YNVT+LHY
Sbjct: 153 LFRLARGYALAHTHSIDSTTAVVEYNVTVLHY 184

Source: Picea mariana

Species: Picea mariana

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105209|ref|XP_002313728.1| predicted protein [Populus trichocarpa] gi|222850136|gb|EEE87683.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 90/177 (50%), Positives = 118/177 (66%), Gaps = 17/177 (9%)

Query: 10  LVGVLTLFCTT---------EAMKSKVTRMQFYMHDIVSGPTATAVPVAGRS-NFTSPDP 59
           LVGV+    +T         EA K  VT +QFY HDI+SG   TA+ VA  S +  SP  
Sbjct: 13  LVGVMQWAKSTNAESWASRLEAEKENVTNLQFYFHDILSGKNPTAIKVAQPSADNKSP-- 70

Query: 60  IKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGS 119
              +FGS+ + D+PLT  PDPNS  +GRAQGIY  S+ Q+E +L+M + + FT G YNGS
Sbjct: 71  --TLFGSIMMADDPLTEGPDPNSKPVGRAQGIYG-SAGQNELALIMAMNFAFTDGIYNGS 127

Query: 120 SFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQM--DAVIGYNVTLLH 174
             S+LG+NP M+ VREMPIVGGTG+FR ARGY +A+T  +D    DA++GYNVT++H
Sbjct: 128 CISLLGKNPAMNPVREMPIVGGTGLFRFARGYAVAQTYWLDLTTGDAIVGYNVTVVH 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|310975316|gb|ADP55095.1| dirigent-like protein [Picea abies] gi|310975318|gb|ADP55096.1| dirigent-like protein [Picea abies]

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 84/152 (55%), Positives = 107/152 (70%), Gaps = 4/152 (2%)

Query: 24  KSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNST 83
           + KV+ + FY HDIV+G  ATAV VA  +  T   P    FGSV VMD+ LT  P+  S 
Sbjct: 37  REKVSHLHFYFHDIVAGQNATAVQVAS-APMTKSSPTG--FGSVVVMDDCLTEGPEVTSK 93

Query: 84  VIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTG 143
           V+GRAQGIY +SS Q+ F LLM  T+ F SG YNGS+ +++G+N  + EVREMPIVGG+G
Sbjct: 94  VVGRAQGIY-VSSSQENFHLLMASTFVFESGKYNGSTLAMIGKNAALEEVREMPIVGGSG 152

Query: 144 IFRLARGYCLAKTSSMDQMDAVIGYNVTLLHY 175
           +FRLARGY  A+T S+D   AV+ YNVT+LHY
Sbjct: 153 LFRLARGYAFARTHSIDSTTAVVEYNVTVLHY 184

Source: Picea abies

Species: Picea abies

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
TAIR|locus:2047002	187	AT2G21100 "AT2G21100" [Arabido	0.857	0.802	0.493	1.3e-36
TAIR|locus:2162366	182	AT5G42510 "AT5G42510" [Arabido	0.96	0.923	0.445	2.5e-33
TAIR|locus:2162361	185	AT5G42500 "AT5G42500" [Arabido	0.828	0.783	0.463	4.7e-32
TAIR|locus:2091521	186	AT3G13650 "AT3G13650" [Arabido	0.828	0.779	0.461	6.9e-31
TAIR|locus:2154359	191	AT5G49040 "AT5G49040" [Arabido	0.84	0.769	0.445	1.8e-30
TAIR|locus:2121249	190	AT4G38700 "AT4G38700" [Arabido	0.862	0.794	0.445	2.3e-30
TAIR|locus:2035661	187	AT1G55210 "AT1G55210" [Arabido	0.828	0.775	0.441	3.8e-30
TAIR|locus:2017689	193	AT1G22900 "AT1G22900" [Arabido	0.828	0.751	0.442	4.9e-30
TAIR|locus:2009769	189	AT1G65870 "AT1G65870" [Arabido	0.828	0.767	0.476	7.9e-30
TAIR|locus:2196282	185	AT1G58170 "AT1G58170" [Arabido	0.84	0.794	0.432	2.7e-29

TAIR|locus:2047002 AT2G21100 "AT2G21100" [Arabidopsis thaliana (taxid:3702)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 77/156 (49%), Positives = 110/156 (70%)

Query:    21 EAMKSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDP 80
             E  K KVT +QFY HD +SG   TAV VA  ++ T   P   +FG+VF++D+ LT T DP
Sbjct:    36 ETGKDKVTNLQFYFHDTLSGKNPTAVKVAQGTD-TEKSP--TLFGAVFMVDDALTETADP 92

Query:    81 NSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVG 140
              S ++GRAQG+Y  SS ++E  L+M +++ F  GPY  S+ S++G+N  M+ +REMPIVG
Sbjct:    93 KSKLVGRAQGLYG-SSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVG 151

Query:   141 GTGIFRLARGYCLAKTSSMDQM--DAVIGYNVTLLH 174
             GTG+FR+ARGY +A+T+  D    DA++GYNVT++H
Sbjct:   152 GTGMFRMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2162366 AT5G42510 "AT5G42510" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 78/175 (44%), Positives = 105/175 (60%)

Query:     3 LSGKFLFLVGVLTLFCTT--EAMK-SKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDP 59
             LS   L  V V     TT  +  K  K T + FY HD++SG   TAV VA     T+   
Sbjct:    12 LSSILLLAVSVTAYSTTTPYQGYKPEKFTHLHFYFHDVISGDKPTAVKVAEARPTTT--- 68

Query:    60 IKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGS 119
             +   FG + + D+PLT  PDP+S  +GRAQG+YA ++ +D     M   Y FT+G +NGS
Sbjct:    69 LNVKFGVIMIADDPLTEGPDPSSKEVGRAQGMYASTAMKD-IVFTMVFNYVFTAGEFNGS 127

Query:   120 SFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLLH 174
             + +V GRN + S+VRE+PI+GGTG FR ARGY L KT  +  +DAV+ YNV + H
Sbjct:   128 TIAVYGRNDIFSKVRELPIIGGTGAFRFARGYALPKTYKIVGLDAVVEYNVFIWH 182

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2162361 AT5G42500 "AT5G42500" [Arabidopsis thaliana (taxid:3702)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 69/149 (46%), Positives = 98/149 (65%)

Query:    26 KVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVI 85
             K T + FY HD++SG   TAV VA  +  T+   +   FG + + D+PLT  PDP+S  +
Sbjct:    41 KFTHLHFYFHDVISGDKPTAVKVA-EARRTNSSNVN--FGVIMIADDPLTEGPDPSSKEV 97

Query:    86 GRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIF 145
             GRAQG+YA+++ ++  S  M     FT+G +NGS+ ++ GRN + S+VREMPI+GGTG F
Sbjct:    98 GRAQGMYALTAMKN-ISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAF 156

Query:   146 RLARGYCLAKTSSMDQMDAVIGYNVTLLH 174
             R ARGY  AKT  +  +DAV+ YNV + H
Sbjct:   157 RFARGYAQAKTYKVVGLDAVVEYNVFIWH 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2091521 AT3G13650 "AT3G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 71/154 (46%), Positives = 100/154 (64%)

Query:    24 KSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNST 83
             K K+T  + Y HDI+SG   ++V +        P    + FGSV V+DN LT     NST
Sbjct:    40 KEKLTHFRVYWHDILSGSNPSSVVI------NPPISNSSFFGSVTVIDNRLTTEVAVNST 93

Query:    84 VIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTG 143
             ++G+AQGIYA + Q+D  S LM + + F +G YNGSS ++LGRN V+++VREMP++GG+G
Sbjct:    94 LVGQAQGIYAATGQRDA-SALMVMNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSG 152

Query:   144 IFRLARGYCLAKTSSMDQM--DAVIGYNVTLLHY 175
             +FR ARGY  A+T   DQ   DA + Y+  +LHY
Sbjct:   153 LFRFARGYVEARTMWFDQKSGDATVEYSCYVLHY 186

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

TAIR|locus:2154359 AT5G49040 "AT5G49040" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 69/155 (44%), Positives = 103/155 (66%)

Query:    24 KSKVTRMQFYMHDIVSGPTATAVPVAGR-SNFTSPDPIKAMFGSVFVMDNPLTMTPDPNS 82
             K K+T ++ Y HDIV+G   +++ + G  + ++S     + FGS+ ++DN LT+    NS
Sbjct:    42 KEKLTHLRVYWHDIVTGRNPSSIRIQGPVAKYSS----SSYFGSITMIDNALTLDVPINS 97

Query:    83 TVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGT 142
             TV+G+AQG+Y  ++Q+ E  LLM +   F +G YNGS+ ++LGRN VMS+VREMP+VGG+
Sbjct:    98 TVVGQAQGMYVGAAQK-EIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGS 156

Query:   143 GIFRLARGYCLAKTSSMDQM--DAVIGYNVTLLHY 175
             G+FR ARGY  A+T   D    DA +  N  +LHY
Sbjct:   157 GMFRFARGYVEARTKLFDMKTGDATVESNCYILHY 191

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2121249 AT4G38700 "AT4G38700" [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 70/157 (44%), Positives = 100/157 (63%)

Query:    24 KSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNST 83
             + KVTR++FY+HD +SG   TAV +A  +N T        FGS+FV+D+PLT+ P+ +S 
Sbjct:    35 EEKVTRVRFYLHDTLSGQNPTAVRIA-HANLTGGSASPVGFGSLFVIDDPLTVGPEKHSK 93

Query:    84 VIGRAQGIYAMSSQQ-DEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEV--REMPIVG 140
              IG  QG+Y    +   +F+++M     FT+G +NGSS S+  RNPV  EV  RE+ IVG
Sbjct:    94 EIGNGQGMYVSGCKDLSKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGEREIAIVG 153

Query:   141 GTGIFRLARGYCLAKTSSMDQM--DAVIGYNVTLLHY 175
             G G FR+ARG+   KT+ +D    DAV+ Y+ T+ HY
Sbjct:   154 GRGKFRMARGFVKVKTNKIDMKTGDAVLRYDATVYHY 190

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2035661 AT1G55210 "AT1G55210" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 68/154 (44%), Positives = 99/154 (64%)

Query:    24 KSKVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNST 83
             K K+T  + Y HDI+SGP  T++ +        P    + FG++ ++DN LT     NST
Sbjct:    41 KEKLTHFKVYWHDILSGPNPTSIMIQ------PPVTNSSYFGAISMIDNALTAKVPMNST 94

Query:    84 VIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTG 143
             V+G+AQG YA ++Q+ E   LM + + F +G YNGS+ ++LGRN  +SEVREMPIVGG+G
Sbjct:    95 VLGQAQGFYAGAAQK-ELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSG 153

Query:   144 IFRLARGYCLAKTS--SMDQMDAVIGYNVTLLHY 175
             +FR ARGY  A+T   ++   DA + Y+  +LHY
Sbjct:   154 LFRFARGYVEARTKWINLKNGDATVEYSCYVLHY 187

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2017689 AT1G22900 "AT1G22900" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 66/149 (44%), Positives = 93/149 (62%)

Query:    26 KVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVI 85
             K+T + FY HDI+SG   T + VA      S   +   FG+V ++D P+T  P+ +S  +
Sbjct:    49 KLTHLHFYFHDIISGDKPTTIRVAEAPGTNSSATV---FGAVLIVDAPVTEGPELSSKEV 105

Query:    86 GRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIF 145
             GRAQG+YA S+    F   M   + FT G +NGS+ ++ GRNP++ E RE+PI+GGTG F
Sbjct:   106 GRAQGLYA-STDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDF 164

Query:   146 RLARGYCLAKTSSMDQMDAVIGYNVTLLH 174
             R ARGY L KT  +  +DAV+ YNV + H
Sbjct:   165 RFARGYALPKTYKVVNIDAVVEYNVFIWH 193

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2009769 AT1G65870 "AT1G65870" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 72/151 (47%), Positives = 98/151 (64%)

Query:    26 KVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVI 85
             K+T + FY HDIVSG   T+V VA   N  + +     FG V V+D+ LT+ P+  S  +
Sbjct:    43 KLTHLHFYFHDIVSGDKPTSVQVA---NGPTTNSSATGFGLVAVVDDKLTVGPEITSEEV 99

Query:    86 GRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIF 145
             GRAQG+YA S+ Q++  LLM     FT G ++ S+ ++ GRNPV+S+VREMPI+GGTG F
Sbjct:   100 GRAQGMYA-SADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAF 158

Query:   146 RLARGYCLAKTS--SMDQMDAVIGYNVTLLH 174
             R  RGY LAKT   ++   DAV+ YNV + H
Sbjct:   159 RFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2196282 AT1G58170 "AT1G58170" [Arabidopsis thaliana (taxid:3702)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 67/155 (43%), Positives = 98/155 (63%)

Query:    24 KSKVTRMQFYMHDIVSGPTATAVPVAGR-SNFTSPDPIKAMFGSVFVMDNPLTMTPDPNS 82
             K K+T  + Y HDIV+G  +++V +      +T        FG + ++DNPLT+TP  +S
Sbjct:    36 KEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATG----FGLMRMIDNPLTLTPKLSS 91

Query:    83 TVIGRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGT 142
              ++GRAQG YA +S++ E  LLM + +    G YNGS+ +VLGRN V  +VREMP++GG+
Sbjct:    92 KMVGRAQGFYAGTSKE-EIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGS 150

Query:   143 GIFRLARGYCLAKTSSMDQM--DAVIGYNVTLLHY 175
             G+FR ARGY  A T   +    +A++ YN  LLHY
Sbjct:   151 GLFRFARGYVQASTHEFNLKTGNAIVEYNCYLLHY 185

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	175
pfam03018	144	pfam03018, Dirigent, Dirigent-like protein	3e-63

>gnl|CDD|217321 pfam03018, Dirigent, Dirigent-like protein

 Score =  191 bits (487), Expect = 3e-63
 Identities = 81/150 (54%), Positives = 104/150 (69%), Gaps = 7/150 (4%)

Query: 26  KVTRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVI 85
           K+T + FYMHDIV+GP ATAV VA       P    + FG+V V+D+PLT  PD NS ++
Sbjct: 1   KLTHLHFYMHDIVTGPNATAVQVAS-----PPGTNSSGFGTVVVIDDPLTEGPDLNSKLV 55

Query: 86  GRAQGIYAMSSQQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIF 145
           GRAQG Y + + QD  SLLM  T+ FTSG YNGS+ +V+GRNPV  EVRE+ +VGGTG F
Sbjct: 56  GRAQGFY-VYASQDGLSLLMAFTFVFTSGEYNGSTLAVMGRNPVFEEVRELSVVGGTGKF 114

Query: 146 RLARGYCLAKT-SSMDQMDAVIGYNVTLLH 174
           R+ARGY LA+T  S+   DA++  NV + H
Sbjct: 115 RMARGYALARTYFSLTSGDAIVELNVYVKH 144

This family contains a number of proteins which are induced during disease response in plants. Members of this family are involved in lignification. Length = 144

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PF03018	144	Dirigent: Dirigent-like protein; InterPro: IPR0042	100.0
PF06351	176	Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR	97.94
PLN02343	229	allene oxide cyclase	97.34
PF11528	134	DUF3224: Protein of unknown function (DUF3224); In	86.3

>PF03018 Dirigent: Dirigent-like protein; InterPro: IPR004265 This family contains a number of proteins which are induced during disease response in plants

Probab=100.00  E-value=1.3e-53  Score=334.93  Aligned_cols=142  Identities=50%  Similarity=0.830  Sum_probs=134.5

Q ss_pred             c-ceEEEEEeeccCCCCCceeeeecCCCCCCCCCccCCcceEEEEecccccCCCCCCCceeeeeEEEEeecCCCcceEEE
Q 043734           27 V-TRMQFYMHDIVSGPTATAVPVAGRSNFTSPDPIKAMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQQDEFSLLM  105 (175)
Q Consensus        27 k-~~l~fY~Hd~~~g~n~t~~~v~~~~~~~~~~~~~~~FG~~~v~Dd~ltegp~~~S~~VGraqG~~~~~~s~~~~~~~~  105 (175)
                      | +||+|||||+++|||+|+++|++++++. .    .+||+++|+||||||||+++||+||||||+|+ .+++++.+|++
T Consensus         1 ~~t~l~fY~H~~~~g~n~t~~~v~~~~~~~-~----~~FG~~~V~D~~lt~gp~~~S~~VGraqG~~~-~~s~~~~~~~~   74 (144)
T PF03018_consen    1 KETHLHFYMHDIVSGPNPTAVVVAEPPGPS-S----SGFGTVVVFDDPLTEGPDPDSKLVGRAQGFYV-SASLDGSSWFM   74 (144)
T ss_pred             CceEEEEEeeecCCCCCCCEEEeccCCCCC-C----CCCcEEEEEeeceEcCCCCCCccceEEEEEEE-eecccCccEEE
Confidence            5 8999999999999999999999887432 1    37999999999999999999999999999999 99999999999


Q ss_pred             EEEEEEecCCcCCceEEEEcCCCCCCCceeeEEeecccceeceEeEEEEEEE-EecCCCeEEEEEEEEEe
Q 043734          106 TLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPIVGGTGIFRLARGYCLAKTS-SMDQMDAVIGYNVTLLH  174 (175)
Q Consensus       106 ~~t~vF~~g~~~GSTL~v~G~~~~~~~~~E~aVVGGTG~Fr~ArGya~~~t~-~~~~~~~v~e~~v~v~h  174 (175)
                      +++++|++++||||||+++|+++..+++||||||||||+|||||||++++++ +..+.++|+||||||+|
T Consensus        75 ~~~~vF~~g~~~GStl~v~G~~~~~~~~~e~~VVGGTG~Fr~ArG~~~~~~~~~~~~~~~v~e~~v~~~h  144 (144)
T PF03018_consen   75 SFTLVFEDGEYNGSTLSVMGRDPFFEPVRELAVVGGTGEFRMARGYAKLRTVFDSSGGNAVLELNVHLFH  144 (144)
T ss_pred             EEEEEEEecccCCCeEEEeCCCcccCcccEEeEecCCCeEcceEEEEEEEEEeecCCCCEEEEEEEEEEC
Confidence            9999999999999999999999998999999999999999999999999999 66699999999999998

>PF06351 Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR009410 This family consists of several plant specific allene oxide cyclase proteins (5

Probab=97.94  E-value=0.00027  Score=56.68  Aligned_cols=91  Identities=20%  Similarity=0.248  Sum_probs=66.4

Q ss_pred             CCcceEEEEecccccCCCCCCCceeeeeEEEEeec---CCCcceEEEEEEEEEecCCcCCceEEEEcCCCCCCCceeeEE
Q 043734           62 AMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSS---QQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPI  138 (175)
Q Consensus        62 ~~FG~~~v~Dd~ltegp~~~S~~VGraqG~~~~~~---s~~~~~~~~~~t~vF~~g~~~GSTL~v~G~~~~~~~~~E~aV  138 (175)
                      ...|+.+-|.|+|++|.-  -+.+|--+|+-++..   .+.+-.+--..++.|-+   .| .|+++|....-+ ..-++|
T Consensus        34 nslGDlvpFsNklY~g~l--~~rlGitaG~Cvliq~~p~k~GdryEaiySfyfGd---yG-hISvqGpy~t~e-DtyLAV  106 (176)
T PF06351_consen   34 NSLGDLVPFSNKLYDGDL--QKRLGITAGICVLIQHVPEKKGDRYEAIYSFYFGD---YG-HISVQGPYLTYE-DTYLAV  106 (176)
T ss_dssp             S-TT-EEEEEEEEEETTS--S-EEEEEEEEEEEEEEECCCTEEEEEEEEEEE-GG---GE-EEEEEEEEETTS--EEEEE
T ss_pred             hhcccccccccccccchh--hhhhcccceEEEEEEeccccCCceEEEEEEEEecc---cc-eEEEeccccccc-ceeEEE
Confidence            458999999999999864  688999999988422   22333444556677755   46 999999986654 468999


Q ss_pred             eecccceeceEeEEEEEEEEe
Q 043734          139 VGGTGIFRLARGYCLAKTSSM  159 (175)
Q Consensus       139 VGGTG~Fr~ArGya~~~t~~~  159 (175)
                      .||||-|+.|+|-++++.+-+
T Consensus       107 TGGtGiF~g~~GqVkL~qivf  127 (176)
T PF06351_consen  107 TGGTGIFEGVYGQVKLHQIVF  127 (176)
T ss_dssp             EEEEETTTT-EEEEEEEEEET
T ss_pred             eccCceeecceEEEEEEEeec
Confidence            999999999999998887755

3.99.6 from EC). The allene oxide cyclase (AOC)-catalysed step in jasmonate (JA) biosynthesis is important in the wound response of tomato [].; GO: 0016853 isomerase activity, 0009507 chloroplast; PDB: 2GIN_A 2DIO_B 2BRJ_B 2Q4I_B 1Z8K_A 1ZVC_A.

>PLN02343 allene oxide cyclase

Probab=97.34  E-value=0.0051  Score=51.23  Aligned_cols=91  Identities=20%  Similarity=0.263  Sum_probs=71.9

Q ss_pred             CCcceEEEEecccccCCCCCCCceeeeeEEEEeecC---CCcceEEEEEEEEEecCCcCCceEEEEcCCCCCCCceeeEE
Q 043734           62 AMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQ---QDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPI  138 (175)
Q Consensus        62 ~~FG~~~v~Dd~ltegp~~~S~~VGraqG~~~~~~s---~~~~~~~~~~t~vF~~g~~~GSTL~v~G~~~~~~~~~E~aV  138 (175)
                      ...|+++-|.++|++|.  --|.+|--.|+-++.-.   +.+-.+=..+++.|-|   .| .|++||....-+ ..-++|
T Consensus        85 ~sLGDlVPFsNKlY~g~--L~kRlGiTaG~Cvliq~~pek~gDryEa~ySfyfGD---yG-HisvqGpyltye-Dt~Lai  157 (229)
T PLN02343         85 NALGDLVPFTNKLYTGD--LKKRLGITAGLCVLIQHVPEKKGDRYEAIYSFYFGD---YG-HISVQGPYLTYE-DTYLAI  157 (229)
T ss_pred             ccccceeccccccccch--hhhhhcccceeEEEEEeccccCCceeEEEEEEEecC---cc-eeEEeccccccc-cceEEe
Confidence            45899999999999975  45789999998874221   2344566677888866   46 899999987654 368999


Q ss_pred             eecccceeceEeEEEEEEEEe
Q 043734          139 VGGTGIFRLARGYCLAKTSSM  159 (175)
Q Consensus       139 VGGTG~Fr~ArGya~~~t~~~  159 (175)
                      .||+|-|+.|+|-+.+..+-+
T Consensus       158 TGGsGiFega~GqvkL~qivf  178 (229)
T PLN02343        158 TGGSGIFEGAYGQVKLHQIVF  178 (229)
T ss_pred             ecCcceeecceeEEEEeeeee
Confidence            999999999999998887665

>PF11528 DUF3224: Protein of unknown function (DUF3224); InterPro: IPR021607 This bacterial family of proteins has no known function

Probab=86.30  E-value=11  Score=29.26  Aligned_cols=88  Identities=18%  Similarity=0.174  Sum_probs=52.3

Q ss_pred             CCceeeeeEEEEeecCC-CcceEEEEEEEEE-ecCCcCCceEEEE--cCCCCCCCceeeEEe--ecccceeceEeEEEEE
Q 043734           82 STVIGRAQGIYAMSSQQ-DEFSLLMTLTYGF-TSGPYNGSSFSVL--GRNPVMSEVREMPIV--GGTGIFRLARGYCLAK  155 (175)
Q Consensus        82 S~~VGraqG~~~~~~s~-~~~~~~~~~t~vF-~~g~~~GSTL~v~--G~~~~~~~~~E~aVV--GGTG~Fr~ArGya~~~  155 (175)
                      -.+.|++++-|+ .+-. ++...++.+..+= +-...+| |+.++  |.........+|-||  -|||++...+|-..++
T Consensus        40 G~l~Gts~~~~L-~~y~~~g~a~yva~E~~~Gtl~Gr~G-sFvl~h~G~~~~g~~~~~~~VVPgSGTGeL~Gl~Gsg~~~  117 (134)
T PF11528_consen   40 GDLEGTSTGEYL-MAYDPDGSAGYVAFERFTGTLDGRSG-SFVLQHSGTFDAGTASSSFTVVPGSGTGELAGLSGSGTIT  117 (134)
T ss_dssp             TTEEEEEEEEEE-EEEECTTEEEEEEEEEEEEEETTEEE-EEEEEEEEEEETTEEEEEEEE-TT--EETTTTEEEEEEEE
T ss_pred             eEEEEEEEEEEE-EEEcCCCcEEEEEEEEEEEEECCceE-EEEEEEEEEEcCCcceEEEEEeCCCCchhhcCCEEEEEEE
Confidence            457788888888 4432 4445555443221 2234566 44444  444333345689999  9999999999998665


Q ss_pred             EEEecCCCeEEEEEEEEEe
Q 043734          156 TSSMDQMDAVIGYNVTLLH  174 (175)
Q Consensus       156 t~~~~~~~~v~e~~v~v~h  174 (175)
                      ...   +...++|+..+-+
T Consensus       118 ~~~---g~h~y~f~y~l~d  133 (134)
T PF11528_consen  118 IDE---GQHAYDFEYTLPD  133 (134)
T ss_dssp             EET---TCEEEEEEEEEEE
T ss_pred             ECC---CCceeeEEEECCC
Confidence            443   4447788877643

; PDB: 2OOJ_B 2Q03_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
2brj_A	188	Arabidopsis thaliana genomic DNA, chromosome 3, TA	98.77
4h6b_A	195	Allene oxide cyclase; B-barrel, oxylipins, fatty a	98.52

>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A

Probab=98.77  E-value=2.1e-07  Score=74.26  Aligned_cols=101  Identities=22%  Similarity=0.244  Sum_probs=79.0

Q ss_pred             CCcceEEEEecccccCCCCCCCceeeeeEEEEeecC----CCcceEEEEEEEEEecCCcCCceEEEEcCCCCCCCceeeE
Q 043734           62 AMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQ----QDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMP  137 (175)
Q Consensus        62 ~~FG~~~v~Dd~ltegp~~~S~~VGraqG~~~~~~s----~~~~~~~~~~t~vF~~g~~~GSTL~v~G~~~~~~~~~E~a  137 (175)
                      ...|+.+.|+++|.++..  -+.||.-+|+-+ ...    +.+..+-..+++.|-+   .| .|++||....- +...+|
T Consensus        43 ~slGDlvpFsNkLydg~l--~~rvG~taG~Cv-~~~~~p~~~gdryE~tyS~yfgd---~G-hISvQGpy~t~-~Dt~LA  114 (188)
T 2brj_A           43 FGLGDLVPFTNKLYTGDL--KKRVGITAGLCV-VIEHVPEKKGERFEATYSFYFGD---YG-HLSVQGPYLTY-EDSFLA  114 (188)
T ss_dssp             SCTTCEEEECCEEEETTS--SCEEEEEEEEEE-EEEEEGGGTEEEEEEEEEEECGG---GE-EEEEEEEEETT-BCEEEE
T ss_pred             cCcccEEeeccccccccc--ceeccccceEEE-EEEecCCCCCcEEEEEEEEEeCC---Cc-eEEEecccccc-ccceee
Confidence            458999999999997653  589999999988 443    3344566677788865   35 99999996433 347899


Q ss_pred             EeecccceeceEeEEEEEEEEecCCCeEEEEEEEEE
Q 043734          138 IVGGTGIFRLARGYCLAKTSSMDQMDAVIGYNVTLL  173 (175)
Q Consensus       138 VVGGTG~Fr~ArGya~~~t~~~~~~~~v~e~~v~v~  173 (175)
                      |.||||.|+.|+|.+.++++.+.   .-++|.+||.
T Consensus       115 ITGGTGif~gA~G~Vkl~~i~~P---~k~~yTf~L~  147 (188)
T 2brj_A          115 ITGGAGIFEGAYGQVKLQQLVYP---TKLFYTFYLK  147 (188)
T ss_dssp             EEEEEETTTTCEEEEEEEEEETT---TEEEEEEEEE
T ss_pred             EecCcceEcceEEEEEEEeeccC---ceEEEEEEEe
Confidence            99999999999999999998773   2477777764

>4h6b_A Allene oxide cyclase; B-barrel, oxylipins, fatty acid, metabolites, allene-oxide C activity, isomerase; HET: 10X 10Y; 1.35A {Physcomitrella patens} PDB: 4h6c_A 4h6a_A* 4h69_A*

Probab=98.52  E-value=1.5e-06  Score=69.66  Aligned_cols=91  Identities=21%  Similarity=0.264  Sum_probs=71.0

Q ss_pred             CCcceEEEEecccccCCCCCCCceeeeeEEEEeec---CCCcceEEEEEEEEEecCCcCCceEEEEcCCCCCCCceeeEE
Q 043734           62 AMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSS---QQDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMPI  138 (175)
Q Consensus        62 ~~FG~~~v~Dd~ltegp~~~S~~VGraqG~~~~~~---s~~~~~~~~~~t~vF~~g~~~GSTL~v~G~~~~~~~~~E~aV  138 (175)
                      ...|+++.|+++|+++..  -+.||...|+-++..   ...+..+--..++.|.+   .| +|+++|..-.-+ ..-+||
T Consensus        51 ~slGDLvpFsnkLydg~l--~~RiGitaG~Cv~i~~~~~k~GdryEci~Tf~fGD---~G-hIsvqGpy~t~e-Ds~lAI  123 (195)
T 4h6b_A           51 NSLGDLVPFSNKIYDGSL--KTRLGITAGLCTLISHSDQKNGDRYEALYSFYFGD---YG-HISVQGPYITYE-DSYLAI  123 (195)
T ss_dssp             CCTTCEEEECCEEEETTS--CCEEEEEEEEEEEEEEETTTTEEEEEEEEEEECGG---GC-EEEEEEEEETTB-CEEEEE
T ss_pred             cccccccccccccccccc--cccccccccEEEEEeecCCCCCceEEEEEEEEecC---Cc-eEEEecceeccC-ceeEEE
Confidence            459999999999999875  788999999987322   12333444556778865   46 999999985543 467999


Q ss_pred             eecccceeceEeEEEEEEEEe
Q 043734          139 VGGTGIFRLARGYCLAKTSSM  159 (175)
Q Consensus       139 VGGTG~Fr~ArGya~~~t~~~  159 (175)
                      +||||.|+.|+|-+.+..+-+
T Consensus       124 TGGTGiF~Ga~GqVkl~qiv~  144 (195)
T 4h6b_A          124 TGGSGIFAGCYGQAKLHQIIF  144 (195)
T ss_dssp             EEESGGGTTCEEEEEEEEEET
T ss_pred             ecCcceEcccEEEEEEeEeee
Confidence            999999999999998887765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d2brja1	174	Allene oxide cyclase, AOC {Thale cress (Arabidopsi	97.74
d2ooja1	133	Hypothetical protein SO1590 {Shewanella oneidensis	83.81

>d2brja1 b.159.1.1 (A:15-188) Allene oxide cyclase, AOC {Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]}

class: All beta proteins
fold: AOC barrel-like
superfamily: Allene oxide cyclase-like
family: Allene oxide cyclase-like
domain: Allene oxide cyclase, AOC
species: Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]

Probab=97.74  E-value=0.00027  Score=53.60  Aligned_cols=90  Identities=21%  Similarity=0.279  Sum_probs=71.5

Q ss_pred             CCcceEEEEecccccCCCCCCCceeeeeEEEEeecC----CCcceEEEEEEEEEecCCcCCceEEEEcCCCCCCCceeeE
Q 043734           62 AMFGSVFVMDNPLTMTPDPNSTVIGRAQGIYAMSSQ----QDEFSLLMTLTYGFTSGPYNGSSFSVLGRNPVMSEVREMP  137 (175)
Q Consensus        62 ~~FG~~~v~Dd~ltegp~~~S~~VGraqG~~~~~~s----~~~~~~~~~~t~vF~~g~~~GSTL~v~G~~~~~~~~~E~a  137 (175)
                      ...|+.+-|-|+|++|.  .-|.+|--.|+-+. -+    ..+..+--..++.|.|   -| .|++||....-++ .-++
T Consensus        29 n~lGDlVpFsNkly~g~--l~kRlGitaG~C~l-iq~~pek~gdryEa~ySfyfGD---yG-hISvqGpyltyeD-tyla  100 (174)
T d2brja1          29 FGLGDLVPFTNKLYTGD--LKKRVGITAGLCVV-IEHVPEKKGERFEATYSFYFGD---YG-HLSVQGPYLTYED-SFLA  100 (174)
T ss_dssp             SCTTCEEEECCEEEETT--SSCEEEEEEEEEEE-EEEEGGGTEEEEEEEEEEECGG---GE-EEEEEEEEETTBC-EEEE
T ss_pred             ccccccccccchhcccc--hhhhccceeeEEEE-EEecCCcCcceeEEEEEEEecC---cc-cEEEecccccccc-ceee
Confidence            45999999999999864  46889999998873 32    2333455667788876   46 9999999877644 6899


Q ss_pred             EeecccceeceEeEEEEEEEEe
Q 043734          138 IVGGTGIFRLARGYCLAKTSSM  159 (175)
Q Consensus       138 VVGGTG~Fr~ArGya~~~t~~~  159 (175)
                      |+||||-|+.|+|-+.+..+-+
T Consensus       101 iTGGsGiFeGa~GqVkL~qivf  122 (174)
T d2brja1         101 ITGGAGIFEGAYGQVKLQQLVY  122 (174)
T ss_dssp             EEEEEETTTTCEEEEEEEEEET
T ss_pred             eecccceeecceeEEEEeeeee
Confidence            9999999999999998887765

>d2ooja1 b.159.2.1 (A:2-134) Hypothetical protein SO1590 {Shewanella oneidensis [TaxId: 70863]}

class: All beta proteins
fold: AOC barrel-like
superfamily: SO1590-like
family: SO1590-like
domain: Hypothetical protein SO1590
species: Shewanella oneidensis [TaxId: 70863]

Probab=83.81  E-value=5.6  Score=28.21  Aligned_cols=84  Identities=14%  Similarity=0.088  Sum_probs=52.3

Q ss_pred             CCceeeeeEEEEeec--CCCcceEEEEEEEE-EecCCcCCceEEEE--cCCCCCCCceeeEEe--ecccceeceEeEEEE
Q 043734           82 STVIGRAQGIYAMSS--QQDEFSLLMTLTYG-FTSGPYNGSSFSVL--GRNPVMSEVREMPIV--GGTGIFRLARGYCLA  154 (175)
Q Consensus        82 S~~VGraqG~~~~~~--s~~~~~~~~~~t~v-F~~g~~~GSTL~v~--G~~~~~~~~~E~aVV--GGTG~Fr~ArGya~~  154 (175)
                      -.+-|+.++.++ .+  ..++...++.+..+ =+-...+| |+.++  |..........|-||  -|||++...+|...+
T Consensus        39 Gdl~G~s~~e~l-~~y~~~~g~A~yvg~E~f~G~l~Gr~G-tfvlqh~G~~~~g~~~~~~~IVpgSgTGeL~Gl~G~~~i  116 (133)
T d2ooja1          39 GELEARSQGEML-SAMTAVKGSAGYVAIEQVVGKLCGRQG-SFVLQHFGIMTDGQNRLHLEVVPHSGAGELTGLYGTMAI  116 (133)
T ss_dssp             SSEEEEEEEEEE-EEECSSTTCEEEEEEEEEEEEETTEEE-EEEEEEEEEECC--CEEEEEECTTCCEETTTTEEEEEEE
T ss_pred             eeeeeEEEEEEE-EEecCCCCceEEEEEEEEEEEECCceE-EEEEEEeeEEcCCccceEEEEEcCCCCccccccEEEEEE
Confidence            457899999999 55  23444455444321 12234566 45444  555555566789999  999999999999876


Q ss_pred             EEEEecCCCeEEEEEE
Q 043734          155 KTSSMDQMDAVIGYNV  170 (175)
Q Consensus       155 ~t~~~~~~~~v~e~~v  170 (175)
                      + +  +.+..-++|+.
T Consensus       117 ~-~--e~G~h~y~~dy  129 (133)
T d2ooja1         117 S-I--ENGQHFYEFSF  129 (133)
T ss_dssp             E-E--ETTEEEEEEEE
T ss_pred             E-E--eCCeEEEEEEE
Confidence            4 2  34444455544