Citrus Sinensis ID: 043833

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVSM
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHEEcccccEEEEEEEEEEEEccccccEEEEEEEEEEEEccccEEEEEEEEEEEEEEEccEEEEEcccccccccccccEEEEEEEEEEcccccHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccEEEEcccccccccccccccEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccccEEEEEEEEEEEccccEEEEEEEEEEEEEEEcccEEcccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEccEEEEEEcccEEEcccccccccEEccccEEEEcc
Coil and Loop (DISEMBL)
mensrpatgypapthngypppntaypysaappqsqpysyppyyqpptrrnnllrPLVVAAVAVTVILGCALLIFWLvvrpripefhltslsvsnfstnqsqvtGNWDAAIEaynpnkkmrvSYYDVVSGiyydgnyltrtplppfsqdtrertplsakfSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGfkyggwrtrRRLVrvwcpdvpvnvsskgsgslvggarkcrvsm
Flexible Loop (DISEMBL)
mensrpatgypapthngyppPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSvsnfstnqsqvtgNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLsakfsvidsyverkvldsinaerargavkfdfrleaiagfkyggwrtrrRLVRvwcpdvpvnvsskgsgslvggarkcrvsm
Low Complexity Region (SEG)
MENSRPATGYPAPTHNGYPPPNTaypysaappqsqpysyppyyqppTRRNNLLRPLvvaavavtvILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPvnvsskgsgslvggARKCRVSM
Disordered region (IsUnstruct)
************************************************RNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPL*************SAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNV*******************
Disordered Region (DISOPRED)
**************************************************NLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPV**************RKCRVSM
Disordered Region (DISEMBL)
**********PAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVS**********ARKCRVSM
Disordered Region (DISPRO)
**********PAP*HNGYPPPNTAYPYSAAPPQSQP*******QPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVSM
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENSRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVSM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	237	2.2.26 [Sep-21-2011]
Q8VZ13	221	Uncharacterized protein A	no	no	0.658	0.705	0.229	9e-09

>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 5/161 (3%)

Query: 73  IFWLVVRPRIPEFHLTSLSVSNFS--TNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGI 130
           I +L +RP+   + + + SV  F+   N   +   +   I++YNP K + V Y+ +    
Sbjct: 57  ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIST 116

Query: 131 YYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLE 190
            +    +    + PF Q  +  T +  +    +  + +     + AE+++G ++ +  + 
Sbjct: 117 AHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYIT 176

Query: 191 AIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGSGSLVGGAR 231
           A   +K   +R+RRR ++  C  V +NV+   S SL G  R
Sbjct: 177 ARVSYKTWIFRSRRRTLKAVCTPVMINVT---SSSLDGFQR 214

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
255565765	239	conserved hypothetical protein [Ricinus	0.953	0.945	0.461	6e-48
224054468	248	predicted protein [Populus trichocarpa]	0.978	0.935	0.433	7e-43
225464826	239	PREDICTED: uncharacterized protein LOC10	0.962	0.953	0.395	4e-41
356550082	271	PREDICTED: uncharacterized protein LOC10	0.877	0.767	0.416	4e-38
449530299	248	PREDICTED: uncharacterized protein At1g0	0.962	0.919	0.42	1e-37
224104577	246	predicted protein [Populus trichocarpa]	0.974	0.939	0.456	1e-36
449445007	243	PREDICTED: uncharacterized protein At1g0	0.932	0.909	0.419	5e-35
18401372	243	late embryogenesis abundant hydroxyproli	0.932	0.909	0.404	2e-33
297822391	243	hypothetical protein ARALYDRAFT_481623 [	0.881	0.860	0.404	4e-31
326505238	330	predicted protein [Hordeum vulgare subsp	0.805	0.578	0.376	9e-24

>gi|255565765|ref|XP_002523872.1| conserved hypothetical protein [Ricinus communis] gi|223536960|gb|EEF38598.1| conserved hypothetical protein [Ricinus communis]

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 109/236 (46%), Positives = 151/236 (63%), Gaps = 10/236 (4%)

Query: 4   SRPATGYPAPTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPPTRRNNLLRPLVVAAVAV 63
           S P TGYPAPT + +P PN   PY  APP +  Y Y      P  R  LLR ++ A +  
Sbjct: 8   SGPVTGYPAPT-SQHPFPN-GNPY--APPPTNLYYYNHQTPTPLYRTTLLRRIIAAIIVA 63

Query: 64  TVILGCALLIFWLVVRPRIPEFHLTSLSVSNF--STNQSQVTGNWDAAIEAYNPNKKMRV 121
           TV+     LI WLV+RP  P+FH+TS S+SNF  S +  ++T NW+A  + YNPNKK+++
Sbjct: 64  TVLFFTIFLICWLVIRPHRPQFHITSFSISNFNISASSQRLTANWNARFQVYNPNKKLKI 123

Query: 122 SYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARG 181
           SY ++V  +      L++T +PP  QDT+  T L A FS +D+YV+ +VL  INA  AR 
Sbjct: 124 SYDNIVCSLLLKSELLSQTRIPPLYQDTKNLTSLDASFSALDTYVDDRVLKDINA--ARP 181

Query: 182 AVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSS--KGSGSLVGGARKCRV 235
            + F+ RL A  GFK GG+R R RL+RVWC +VP+++SS   GSG+L GG+R+C+V
Sbjct: 182 TLAFNVRLMADVGFKVGGFRARHRLLRVWCDNVPLSLSSATSGSGNLTGGSRECKV 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054468|ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|222845533|gb|EEE83080.1| predicted protein [Populus trichocarpa]

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 145/240 (60%), Gaps = 8/240 (3%)

Query: 4   SRPATGYP-APTHNGYPPP--NTAYPYSAAPPQ--SQPYSYPPYYQPPTRRNNLLRPLVV 58
           SRPATGYP  P    +PPP   +AYPY A PP   + PY+Y      P +R   LR L++
Sbjct: 7   SRPATGYPFVPNGLHHPPPPAGSAYPYQAPPPHQPTYPYTYNTNQTYPNQRAIFLRRLII 66

Query: 59  AAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQV--TGNWDAAIEAYNPN 116
           A +  T I    L I WLV+RP  PEF +TSLS+SNF+ + S    TG W+A  +  NPN
Sbjct: 67  ALIIFTGIFFTILFICWLVIRPHFPEFRVTSLSISNFNVSSSSSSVTGTWNARFQVSNPN 126

Query: 117 KKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINA 176
           KKM++SY ++ + I+Y   +L++T +PPF Q  R  T +  ++    SY+  + ++ IN+
Sbjct: 127 KKMKISYNEIQTSIFYKSEFLSQTRIPPFRQGKRNVTDIDVEYGATSSYIGERTVNQINS 186

Query: 177 ERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKG-SGSLVGGARKCRV 235
           +  R  V F+ R+ A AGFK  G+  RRRL+RV+C DV V  S  G SG+L GGA +C V
Sbjct: 187 DEGRRLVSFNLRIVADAGFKVEGFWARRRLLRVYCNDVAVGTSGNGRSGNLTGGAVRCSV 246

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464826|ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/248 (39%), Positives = 144/248 (58%), Gaps = 20/248 (8%)

Query: 1   MEN-SRPATGYPAPTHNGYPPPNTA---------YPYSAAPPQSQPYSYPPYYQPPTRRN 50
           ME+  RP TGYPAP   GYP P++           P    P  + PY  PPY  P   R 
Sbjct: 1   MEDPHRPVTGYPAP---GYPQPHSTATAYPYNAPPPPYYNPNAAHPYHAPPYSSP---RA 54

Query: 51  NLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAI 110
             LR  + A +A  +I+G  + I WLV+RPR+P F + S S+S+F+ + SQ++G W+ + 
Sbjct: 55  TFLRRFLAAMIAFFIIVGTIIFIVWLVLRPRLPYFSVASASLSSFNVSASQLSGEWNISF 114

Query: 111 EAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKV 170
           +  NPNKK+ +SY  + S I Y    L++T + PF Q T+  T ++A F+ I +YV+   
Sbjct: 115 DVRNPNKKISISYDRIESSIAYKSATLSQTTIAPFYQGTKNETTVTATFAAIGAYVD--- 171

Query: 171 LDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNVSSKGS-GSLVGG 229
           + +INAER RG+V F  ++ A   FK G W+ R R +   C D+ + + S  S GSLVGG
Sbjct: 172 VLAINAERTRGSVSFTVKVFARVSFKSGVWKARSRFLSAQCNDIALGLPSNASRGSLVGG 231

Query: 230 ARKCRVSM 237
           +R+CRV +
Sbjct: 232 SRECRVGL 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550082|ref|XP_003543419.1| PREDICTED: uncharacterized protein LOC100780672 [Glycine max]

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 127/216 (58%), Gaps = 8/216 (3%)

Query: 23  TAYPYSAAPPQSQPY--SYPPYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRP 80
           T YPY+A   Q Q Y  +YPP     +R  +  R      + + V+ G  L+I WLV+RP
Sbjct: 59  TGYPYAA---QQQYYNTTYPPPRSYASR--SFFRAFFATMICLAVVFGVVLIITWLVLRP 113

Query: 81  RIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRT 140
            +P F L SLSVSN S+    ++  W  +    N NKKM VSY  + S I+Y  NY++ +
Sbjct: 114 SLPHFTLHSLSVSNLSSTSQSLSATWHLSFLVRNGNKKMTVSYNALRSSIFYRQNYISES 173

Query: 141 PLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGW 200
            L PF QDTR +T L+A  +   +Y+E K++D++NAER   +V FD ++ A   F+ G W
Sbjct: 174 QLAPFRQDTRSQTTLNATLTAAGTYLEPKLIDNLNAERNASSVLFDVQVVAATSFRSGSW 233

Query: 201 RTRRRLVRVWCPDVPVNV-SSKGSGSLVGGARKCRV 235
           R R R+++V C  VPV V S   SG LVGG R+C+V
Sbjct: 234 RFRTRVLKVLCRKVPVGVSSKSSSGDLVGGDRECQV 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530299|ref|XP_004172133.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/250 (42%), Positives = 147/250 (58%), Gaps = 22/250 (8%)

Query: 4   SRPATGYPA-------PTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPP------TRRN 50
           SRP TGYPA       P  N +P    AYPY AAPP    YSYP  Y  P        R 
Sbjct: 5   SRPVTGYPAYPNGRPPPPPNSHPQAQ-AYPY-AAPP----YSYPTQYANPYDSTHHNARL 58

Query: 51  NLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAI 110
           + LR L+   + V +I    L I WLV+RP++PEF + S  V+NFST    ++ +W    
Sbjct: 59  SFLRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGF 118

Query: 111 EAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKV 170
             +NPNKKM VSY  + S ++Y+  +LT T +PPF+Q+ + ++ ++A FS + +YVE   
Sbjct: 119 SVFNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASS 178

Query: 171 LDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV---PVNVSSKGSGSLV 227
           L+ IN +R RG +KF+  + A  GF+ G WRTRRRL+RV C D+     + +S GSG L+
Sbjct: 179 LNKINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLI 238

Query: 228 GGARKCRVSM 237
           G +R CRV +
Sbjct: 239 GESRACRVGI 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104577|ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|222849894|gb|EEE87441.1| predicted protein [Populus trichocarpa]

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/239 (45%), Positives = 155/239 (64%), Gaps = 8/239 (3%)

Query: 4   SRPATGYP---APTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQP-PTRRNNLLRPLVVA 59
           SRPATGYP      H   PPP TAYPY A PPQ     Y    QP P +R  LLR L+ A
Sbjct: 7   SRPATGYPFVPNGIHYPPPPPGTAYPYQAPPPQPANPYYYNTNQPYPNQRATLLRRLIAA 66

Query: 60  AVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVT--GNWDAAIEAYNPNK 117
            + VTVI    L I WLV+RP +PEF +TSLSVS+F+ + S  +  GNW+A  + YNPNK
Sbjct: 67  LIIVTVIFFTILFIVWLVIRPHLPEFRVTSLSVSSFNASSSSSSVSGNWNARFQVYNPNK 126

Query: 118 KMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAE 177
            +++SY D+ S IYY   +L++T +PPF Q  +  T ++A++  + SY+  + ++ IN +
Sbjct: 127 -LKISYGDIQSSIYYKSEFLSQTRIPPFKQAKKNVTDINAEYGAMGSYIAGRAVNQINGD 185

Query: 178 RARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPV-NVSSKGSGSLVGGARKCRV 235
           + RG+V F+ ++ A A ++ GG+R RRRL+RV+C D+ V    + GSG+L GGAR+C+V
Sbjct: 186 KGRGSVSFNLKIVADAVYRVGGFRARRRLLRVFCDDLAVGISGNGGSGNLTGGARRCKV 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445007|ref|XP_004140265.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 142/243 (58%), Gaps = 22/243 (9%)

Query: 4   SRPATGYPA-------PTHNGYPPPNTAYPYSAAPPQSQPYSYPPYYQPP------TRRN 50
           SRP TGYPA       P  N +P    AYPY AAPP    YSYP  Y  P        R 
Sbjct: 5   SRPVTGYPAYPNGRPPPPPNSHPQAQ-AYPY-AAPP----YSYPTQYANPYDSTHHNARL 58

Query: 51  NLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAI 110
           + LR L+   + V +I    L I WLV+RP++PEF + S  V+NFST    ++ +W    
Sbjct: 59  SFLRALIAGIIVVFIITAVILFIIWLVLRPQLPEFRVDSFQVTNFSTAAKTLSASWFIGF 118

Query: 111 EAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKV 170
             +NPNKKM VSY  + S ++Y+  +LT T +PPF+Q+ + ++ ++A FS + +YVE   
Sbjct: 119 SVFNPNKKMTVSYDFIDSTLFYNNEFLTDTRVPPFAQEKKTQSVVNASFSALSAYVEASS 178

Query: 171 LDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV---PVNVSSKGSGSLV 227
           L+ IN +R RG +KF+  + A  GF+ G WRTRRRL+RV C D+     + +S GSG L+
Sbjct: 179 LNKINDDRRRGTIKFNVGISARVGFRAGWWRTRRRLLRVLCEDLSVSFSSSNSSGSGKLI 238

Query: 228 GGA 230
           G A
Sbjct: 239 GEA 241

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401372|ref|NP_565642.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|13272403|gb|AAK17140.1|AF325072_1 unknown protein [Arabidopsis thaliana] gi|5306271|gb|AAD42003.1| expressed protein [Arabidopsis thaliana] gi|15146320|gb|AAK83643.1| At2g27260/F12K2.16 [Arabidopsis thaliana] gi|20147333|gb|AAM10380.1| At2g27260/F12K2.16 [Arabidopsis thaliana] gi|330252871|gb|AEC07965.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 147/247 (59%), Gaps = 26/247 (10%)

Query: 4   SRPATGYPAPTH-----------NGYPPP--NTAYPYSAAPPQSQPYSYPPYYQP-PTRR 49
           SRPATGYP P             NGYP P   TAYPY          ++ PYY P P  R
Sbjct: 5   SRPATGYPYPYPYPNPQQQQPPTNGYPNPAAGTAYPYQ---------NHNPYYAPQPNPR 55

Query: 50  NNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAA 109
             ++R L +      ++LG  L IF+L+VRP++P+ +L SLSVSNF+ + +QV+G WD  
Sbjct: 56  AVIIRRLFIVFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQ 115

Query: 110 IEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERK 169
           ++  NPN KM + Y   +  +YY+   L+ T L PF Q  +++T ++A  SV  +YV+ +
Sbjct: 116 LQFRNPNSKMSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGR 175

Query: 170 VLDSINAERA-RGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDVPVNV-SSKGSGSLV 227
           ++DSI  ER+ +G V+FD R+ +   F+YG +R RRR V V+C DV V V  S G G +V
Sbjct: 176 LVDSIGKERSVKGNVEFDLRMISYVTFRYGAFR-RRRYVTVYCDDVAVGVPVSSGEGKMV 234

Query: 228 GGARKCR 234
           G +++C+
Sbjct: 235 GSSKRCK 241

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822391|ref|XP_002879078.1| hypothetical protein ARALYDRAFT_481623 [Arabidopsis lyrata subsp. lyrata] gi|297324917|gb|EFH55337.1| hypothetical protein ARALYDRAFT_481623 [Arabidopsis lyrata subsp. lyrata]

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 136/225 (60%), Gaps = 16/225 (7%)

Query: 16  NGYP--PPNTAYPYSAAPPQSQPYSYPPYYQPP--TRRNNLLRPLVVAAVAVTVILGCAL 71
           NGYP     TAYPY          ++ PYY PP    R  ++R L +  +   +ILG  L
Sbjct: 27  NGYPNAATGTAYPYQ---------NHNPYYAPPQPNPRAVIIRRLFIVFMTFLLILGLIL 77

Query: 72  LIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIY 131
            IF+LVVRP++P+ +L SLSVSNF+ + +QV+G WD  ++  NPN KM + Y   +  +Y
Sbjct: 78  FIFFLVVRPQLPDVYLNSLSVSNFNVSNNQVSGKWDLQVQFRNPNSKMSLHYDAALCAMY 137

Query: 132 YDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERA-RGAVKFDFRLE 190
           Y+   L+ T L PF Q  +++T ++A  SV  +YV+ ++ DSI  ER+  G+V+FD R+ 
Sbjct: 138 YNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLADSIGKERSVTGSVEFDLRMI 197

Query: 191 AIAGFKYGGWRTRRRLVRVWCPDVPVNV-SSKGSGSLVGGARKCR 234
           +   F+YG +R RRR V V+C DV V +  S  SG +VG  ++C+
Sbjct: 198 SYVTFRYGAFR-RRRYVTVYCDDVVVGLPVSSVSGKMVGSDKRCK 241

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326505238|dbj|BAK03006.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 109/207 (52%), Gaps = 16/207 (7%)

Query: 41  PYYQPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSN--FSTN 98
           PY   P      LR L+   VA  ++LG    I WL++RPR P F L+SL++S   +S  
Sbjct: 130 PYQAAPPPPPTCLRRLLALVVAAFLLLGAGTFIVWLLLRPRAPAFSLSSLTLSRVAYSPA 189

Query: 99  QSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYD---GNYLTRTPLPPFSQDTRERTPL 155
            S ++  +DA++ A NPN K+ +SY  +V+  Y D    + +  T L PF+Q  R  T L
Sbjct: 190 NSSLSAAFDASLLADNPNSKLTISYSSLVA--YVDLAPSSPIAVTSLAPFAQGPRNATTL 247

Query: 156 SAKFSVIDSYV---ERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCP 212
           + +  V  +YV   E   L S N     G ++   RL AIA F  GGWRTRRR +RV C 
Sbjct: 248 AFRLDVDGTYVGPDEAAALKSGNG----GTMEVQVRLAAIAVFDRGGWRTRRRAMRVLCD 303

Query: 213 DVPVNVSSKGS--GSLVGGARKCRVSM 237
            VPV    K +      G AR+C+V +
Sbjct: 304 GVPVTFRGKNATDAKFDGPARRCQVVL 330

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2039632	243	AT2G27260 "AT2G27260" [Arabido	0.886	0.864	0.368	1.8e-32
TAIR|locus:2039185	227	YLS9 "AT2G35980" [Arabidopsis	0.704	0.735	0.304	2e-15
TAIR|locus:2079974	300	AT3G52460 "AT3G52460" [Arabido	0.611	0.483	0.294	1.4e-13
TAIR|locus:2020163	239	AT1G54540 "AT1G54540" [Arabido	0.573	0.569	0.269	7.5e-11
TAIR|locus:2195783	224	AT1G61760 "AT1G61760" [Arabido	0.607	0.642	0.251	9.4e-11
TAIR|locus:2205180	221	AT1G08160 "AT1G08160" [Arabido	0.704	0.755	0.213	3.2e-10
TAIR|locus:2164092	213	AT5G53730 "AT5G53730" [Arabido	0.552	0.615	0.297	8.4e-10
TAIR|locus:2172681	207	AT5G22870 "AT5G22870" [Arabido	0.704	0.806	0.214	1.1e-09
TAIR|locus:2164305	231	NHL3 "AT5G06320" [Arabidopsis	0.578	0.593	0.278	2e-07
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.620	0.565	0.236	8.8e-07

TAIR|locus:2039632 AT2G27260 "AT2G27260" [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 80/217 (36%), Positives = 118/217 (54%)

Query:     4 SRPATGYPAP-----THNGYPPPNTXXXXXXXXXXXXXXXXXXXXXXXTRRNNLLRPLXX 58
             SRPATGYP P          PP N                          R  ++R L  
Sbjct:     5 SRPATGYPYPYPYPNPQQQQPPTNGYPNPAAGTAYPYQNHNPYYAPQPNPRAVIIRRLFI 64

Query:    59 XXXXXXXILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKK 118
                    +LG  L IF+L+VRP++P+ +L SLSVSNF+ + +QV+G WD  ++  NPN K
Sbjct:    65 VFTTFLLLLGLILFIFFLIVRPQLPDVNLNSLSVSNFNVSNNQVSGKWDLQLQFRNPNSK 124

Query:   119 MRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAER 178
             M + Y   +  +YY+   L+ T L PF Q  +++T ++A  SV  +YV+ +++DSI  ER
Sbjct:   125 MSLHYETALCAMYYNRVSLSETRLQPFDQGKKDQTVVNATLSVSGTYVDGRLVDSIGKER 184

Query:   179 A-RGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214
             + +G V+FD R+ +   F+YG +R RRR V V+C DV
Sbjct:   185 SVKGNVEFDLRMISYVTFRYGAFR-RRRYVTVYCDDV 220

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2039185 YLS9 "AT2G35980" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 53/174 (30%), Positives = 78/174 (44%)

Query:    66 ILGCALLIFWLVVRPRIPEFHLTSLSVSNFS-TNQSQVTG-NWDAAIEAYNPNKKMRVSY 123
             ILG A LIFWL+VRPR  +FH+T  S++ F  T+   +   N    +   NPNK++ + Y
Sbjct:    51 ILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGL-Y 109

Query:   124 YDVVSG-IYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLD-SINAERARG 181
             YD +    YY+G   +   L PF Q  +  T L+  F   +  +       ++NAER  G
Sbjct:   110 YDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISG 169

Query:   182 AVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV--PXXXXXXXXXXXXXXARKC 233
                 + +      FK G  + RR   +V C D+  P                KC
Sbjct:   170 VYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKC 223

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0051707 "response to other organism" evidence=TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0010150 "leaf senescence" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2079974 AT3G52460 "AT3G52460" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 46/156 (29%), Positives = 72/156 (46%)

Query:    66 ILGC-ALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYY 124
             +L C +  I WLV+RP+IP F + + SVSNF+      +  W A +   N N K++  Y+
Sbjct:   118 VLLCISTTITWLVLRPQIPLFSVNNFSVSNFNVTGPVFSAQWTANLTIENQNTKLK-GYF 176

Query:   125 DVVSGIYYDGN------YLTRTPLPPFSQDTRERTPLSAKFSVIDSY---VERKVLDSIN 175
             D + G+ Y  N      +L      P   +T++   +    +  D     V   V+D + 
Sbjct:   177 DRIQGLVYHQNAVGEDEFLATAFFQPVFVETKKSVVIGETLTAGDKEQPKVPSWVVDEMK 236

Query:   176 AERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWC 211
              ER  G V F  R+     FK  GW  R   ++V+C
Sbjct:   237 KERETGTVTFSLRMAVWVTFKTDGWAARESGLKVFC 272

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2020163 AT1G54540 "AT1G54540" [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 7.5e-11, P = 7.5e-11
 Identities = 38/141 (26%), Positives = 67/141 (47%)

Query:    67 LGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQS-QVTGNWDAAIEAYNPNKKMRVSYYD 125
             L  A+ + + V  P++P + + SL V+N   N    ++  +   I A NPN+K+ + YY+
Sbjct:    68 LAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPNEKIGI-YYE 126

Query:   126 VVS--GIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAV 183
                  G++YD   L   P+P F Q  R  T L+   +    Y    VL ++  ++  G V
Sbjct:   127 KGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRAQY-GNTVLAALQQQQQTGRV 185

Query:   184 KFDFRLEAIAGFKYGGWRTRR 204
               D ++ A    K G  + ++
Sbjct:   186 PLDLKVNAPVAIKLGNLKMKK 206

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2195783 AT1G61760 "AT1G61760" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 37/147 (25%), Positives = 65/147 (44%)

Query:    67 LGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDV 126
             LG    I W+ ++P  P  H+   S+S  S      T +    I A+NPN+ + + YYD 
Sbjct:    55 LGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGI-YYDS 113

Query:   127 VSG-IYYDGNYLTRTPLP-PFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVK 184
             + G +YY    +  T L  PF QD +  + +    S     V +     +  +R +G + 
Sbjct:   114 MEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIM 173

Query:   185 FDFRLEAIAGFKYGGWRTRRRLVRVWC 211
             F  ++ ++  FK   W ++   +   C
Sbjct:   174 FRLKVRSMIRFKVYTWHSKSHKMYASC 200

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2205180 AT1G08160 "AT1G08160" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 36/169 (21%), Positives = 77/169 (45%)

Query:    48 RRNNLLRPLXXXXXXXXXILGCALLIFWLVVRPRIPEFHLTSLSVSNFS--TNQSQVTGN 105
             RR N +  +         ++G A+LI +L +RP+   + + + SV  F+   N   +   
Sbjct:    32 RRMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAK 91

Query:   106 WDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSY 165
             +   I++YNP K + V Y+ +     +    +    + PF Q  +  T +  +    +  
Sbjct:    92 FSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVA 151

Query:   166 VERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214
             + +     + AE+++G ++ +  + A   +K   +R+RRR ++  C  V
Sbjct:   152 LSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPV 200

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164092 AT5G53730 "AT5G53730" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 42/141 (29%), Positives = 68/141 (48%)

Query:    68 GCALLIF--WLVVRPRIPEFHLTSLSVS--NFSTNQSQV-TGNWDAAIEAYNPNKKMRVS 122
             G  L+IF  WL++ P  PEF LT   +   N +T+ + +   +    + + NPNKK+ + 
Sbjct:    37 GLLLIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGI- 95

Query:   123 YYDVVSGIY--YDGNYLT-RTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERA 179
             YYD +  +Y  Y G  +T    LPPF Q   E   L+A     +  V +     I+ ER+
Sbjct:    96 YYDKLL-VYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERS 154

Query:   180 RGAVKFDFRLEAIAGFKYGGW 200
              G +    +++    +K G W
Sbjct:   155 TGKIIIGMKMDGKLRWKIGTW 175

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2172681 AT5G22870 "AT5G22870" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 36/168 (21%), Positives = 73/168 (43%)

Query:    48 RRNNLLRPLXXXXXXXXXILGCALLIFWLVVRPRIPEFHLTSLSVSNFS-TNQSQVTGNW 106
             RR +L+  +         +     LI WL  +P+   + + + SV NF+ TN + ++  +
Sbjct:    21 RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query:   107 DAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYV 166
                I+++NPN ++ V Y  V   + +    L    + PF Q       +       +  V
Sbjct:    81 QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAV 140

Query:   167 ERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214
              +     + ++ + G + F+  ++A   FK G W++  R  ++ C  V
Sbjct:   141 SKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHV 188

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164305 NHL3 "AT5G06320" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 42/151 (27%), Positives = 71/151 (47%)

Query:    66 ILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQSQ-VTGNWDAAIEAYNPNKKMRVSYY 124
             +LG A LI WL+ RP   +FH+T   ++ F+ + +  +  N D      NPN+++ V Y 
Sbjct:    58 LLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYD 117

Query:   125 DV-VSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFS----VIDSYVERKVL-DSINAER 178
             ++ V G Y D  +     +  F Q  +  T +  K      V+    ERK L + +N++ 
Sbjct:   118 EIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQI 177

Query:   179 ARGAVKFDFRLEAIAGFKYG---GWRTRRRL 206
              R     D +L     FK+G    WR + ++
Sbjct:   178 YR----IDAKLRLKIRFKFGLIKSWRFKPKI 204

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009617 "response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 8.8e-07, P = 8.8e-07
 Identities = 36/152 (23%), Positives = 72/152 (47%)

Query:    66 ILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-SQVTGNWDAAIEAYNPNKKMRVSYY 124
             + G +  + +L+ RP  P++ +   SVS  + N  S ++ +++  + + N N K+ V YY
Sbjct:    88 LAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGV-YY 146

Query:   125 DVVSGI--YYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGA 182
             +  S +  YY+   ++   +P F Q  +  T +    S     +   +   +  E ++  
Sbjct:   147 EKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKT 206

Query:   183 VKFDFRLEAIAGFKYGGWRTRRRLVRVWCPDV 214
             V F  +++A    K+G  +T   +V V C DV
Sbjct:   207 VPFKLKIKAPVKIKFGSVKTWTMIVNVDC-DV 237

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_I001567 hypothetical protein (248 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	237
PTZ00395	1560	PTZ00395, PTZ00395, Sec24-related protein; Provisi	0.003

>gnl|CDD|185594 PTZ00395, PTZ00395, Sec24-related protein; Provisional

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 8   TGYPAPTHNGYP---PPNTAYPYSAAPPQSQPYSYPPYYQPP 46
            GY  P ++       PN+  PY+  P  + PYS PP   PP
Sbjct: 412 AGYSNPGNSNPGYNNAPNSNTPYNNPPNSNTPYSNPPNSNPP 453

Length = 1560

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.44
smart00769	100	WHy Water Stress and Hypersensitive response.	98.51
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.04
COG5608	161	LEA14-like dessication related protein [Defense me	97.23
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.09
PLN03160	219	uncharacterized protein; Provisional	96.51

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=2.1e-35  Score=251.00  Aligned_cols=181  Identities=17%  Similarity=0.296  Sum_probs=152.4

Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhheeeeeeCCCcEEEEEeeEEeeeccCC-----CceeEEEEEEEEEeCCCceeeE
Q 043833           47 TRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPRIPEFHLTSLSVSNFSTNQ-----SQVTGNWDAAIEAYNPNKKMRV  121 (237)
Q Consensus        47 ~~r~~~~r~l~~~l~~l~lllgi~~~i~~lvlrP~~P~~~v~s~~v~~~n~s~-----s~l~~~~~~~l~v~NPN~k~~i  121 (237)
                      .+|++|++|+++++++++++++++++++|++||||+|+|+|++++|++|++++     ..+|++++++++++|||+ ++|
T Consensus        31 ~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~  109 (219)
T PLN03160         31 TRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASF  109 (219)
T ss_pred             cccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeE
Confidence            34555666666665666666777888899999999999999999999999853     268888999999999998 999


Q ss_pred             EEeceEEEEEECCEEEeeeecCCceeCCCCceEEEEEEEEeeeecChHHHHHHHHHhcCCeEEEEEEEEEEEEEEEeEEE
Q 043833          122 SYYDVVSGIYYDGNYLTRTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDFRLEAIAGFKYGGWR  201 (237)
Q Consensus       122 ~Y~~~~~~v~Y~g~~lg~~~lp~F~q~~~~~t~v~~~l~~~~~~l~~~~~~~l~~d~~~g~v~~~v~v~~~vr~k~g~~~  201 (237)
                      +|++++++++|+|+.+|++.+|+|+|++++++.+++++...+..+.+  ..+|.+|+.+|.++|+++++.++++++|++.
T Consensus       110 ~Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~--~~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~  187 (219)
T PLN03160        110 KYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS--VPGLLTDISSGLLNMNSYTRIGGKVKILKII  187 (219)
T ss_pred             EEcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc--chhHHHHhhCCeEEEEEEEEEEEEEEEEEEE
Confidence            99999999999999999999999999999999999998766544432  2468899999999999999999999999999


Q ss_pred             EeeeeEEEECCceeEeeccCCCcccccCCCCceec
Q 043833          202 TRRRLVRVWCPDVPVNVSSKGSGSLVGGARKCRVS  236 (237)
Q Consensus       202 s~~~~~~v~C~~v~v~~~~~~~g~~~~~~~~C~v~  236 (237)
                      ++++.++++|+ +.|.+++.     ..++++|+..
T Consensus       188 k~~v~~~v~C~-v~V~~~~~-----~i~~~~C~~~  216 (219)
T PLN03160        188 KKHVVVKMNCT-MTVNITSQ-----AIQGQKCKRH  216 (219)
T ss_pred             EEEEEEEEEeE-EEEECCCC-----EEeccEeccc
Confidence            99999999998 77766332     4456789865

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.44  E-value=4.4e-13  Score=99.48  Aligned_cols=97  Identities=27%  Similarity=0.425  Sum_probs=73.0

Q ss_pred             EEEEeCCCceeeEEEeceEEEEEECCEEEe-eeecCCceeCCCCceEEEEEEEEeeeecChHHHHHHHHHhcCCeEEEEE
Q 043833          109 AIEAYNPNKKMRVSYYDVVSGIYYDGNYLT-RTPLPPFSQDTRERTPLSAKFSVIDSYVERKVLDSINAERARGAVKFDF  187 (237)
Q Consensus       109 ~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg-~~~lp~F~q~~~~~t~v~~~l~~~~~~l~~~~~~~l~~d~~~g~v~~~v  187 (237)
                      +|+++|||. ++++|++++++++|+|..+| ....++|.|++++++.+.+.+..+...+    .+.+.++. .|...+++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-ccccceEE
Confidence            589999999 99999999999999999999 7889999999999999999888775444    44566666 66777777


Q ss_pred             EEEEEEEEEE-eE--EEEeeeeEEEEC
Q 043833          188 RLEAIAGFKY-GG--WRTRRRLVRVWC  211 (237)
Q Consensus       188 ~v~~~vr~k~-g~--~~s~~~~~~v~C  211 (237)
                      .+++++++++ +.  +.+.+++++.+|
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~~  101 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCEC  101 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeEC
Confidence            7777888884 33  333444444444

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.51  E-value=2.4e-06  Score=63.90  Aligned_cols=83  Identities=17%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             CceeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEeeeecC-CceeCCCCceEEEEEEEEeeeecChHHHHHHHHHh
Q 043833          100 SQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLP-PFSQDTRERTPLSAKFSVIDSYVERKVLDSINAER  178 (237)
Q Consensus       100 s~l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~lp-~F~q~~~~~t~v~~~l~~~~~~l~~~~~~~l~~d~  178 (237)
                      +.++.++.+.+++.|||. +.+.++.++..++++|..+|++..+ ++..++++++.+.+.+... ...    ...+..++
T Consensus        11 ~~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~-~~~----~~~~~~~l   84 (100)
T smart00769       11 SGLEIEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN-LFL----AEALIWHI   84 (100)
T ss_pred             cceEEEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee-hhH----hHHHHHhh
Confidence            367899999999999998 9999999999999999999999986 7999999999999988873 222    23344554


Q ss_pred             cCC-eEEEEEE
Q 043833          179 ARG-AVKFDFR  188 (237)
Q Consensus       179 ~~g-~v~~~v~  188 (237)
                      .+| .++++++
T Consensus        85 ~~~~~~~y~l~   95 (100)
T smart00769       85 ANGEEIPYRLD   95 (100)
T ss_pred             ccCCCccEEEE
Confidence            444 3444443

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.04  E-value=0.00021  Score=61.27  Aligned_cols=84  Identities=13%  Similarity=0.142  Sum_probs=62.9

Q ss_pred             eeCCCcEEEEEeeEEeee--ccCCCceeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEeeeecCCc-eeCCCCceE
Q 043833           78 VRPRIPEFHLTSLSVSNF--STNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPF-SQDTRERTP  154 (237)
Q Consensus        78 lrP~~P~~~v~s~~v~~~--n~s~s~l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~lp~F-~q~~~~~t~  154 (237)
                      |=|+.-.++-.++.....  +-+.+.+..++.-.|.++|+|. ..+.-.+++++++|....+|.+..... ..++++.+.
T Consensus        96 LfPRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q  174 (238)
T PF07092_consen   96 LFPRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNF-YPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQ  174 (238)
T ss_pred             EeCcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCE-EEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCce
Confidence            346665555444444333  3344579999999999999996 999999999999999999999877643 667787777


Q ss_pred             EEEEEEEe
Q 043833          155 LSAKFSVI  162 (237)
Q Consensus       155 v~~~l~~~  162 (237)
                      +..++...
T Consensus       175 ~~~tV~t~  182 (238)
T PF07092_consen  175 VNYTVKTT  182 (238)
T ss_pred             EEEEeeEE
Confidence            77766553

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.23  E-value=0.059  Score=43.16  Aligned_cols=92  Identities=10%  Similarity=0.162  Sum_probs=69.7

Q ss_pred             CCcEEEEEeeEEeeeccCCCceeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEeeeec-CCceeCCCCceEEEEEE
Q 043833           81 RIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPL-PPFSQDTRERTPLSAKF  159 (237)
Q Consensus        81 ~~P~~~v~s~~v~~~n~s~s~l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~l-p~F~q~~~~~t~v~~~l  159 (237)
                      +.|.+.--.+......    .....+-.++.++|||. +.+--..++..++-+|..+|++.. .++..++++...+.+.+
T Consensus        31 ~~p~ve~~ka~wGkvt----~s~~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l  105 (161)
T COG5608          31 KKPGVESMKAKWGKVT----NSETEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPL  105 (161)
T ss_pred             CCCCceEEEEEEEEEe----ccceEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEE
Confidence            5666666666655542    23467888999999998 999999999999999999999764 57999999999999999


Q ss_pred             EEeeeecChHHHHHHHHHhcCC
Q 043833          160 SVIDSYVERKVLDSINAERARG  181 (237)
Q Consensus       160 ~~~~~~l~~~~~~~l~~d~~~g  181 (237)
                      ..+...+.+.    +...+.+|
T Consensus       106 ~~d~~~~ke~----w~~hi~ng  123 (161)
T COG5608         106 RLDNSKIKEW----WVTHIENG  123 (161)
T ss_pred             EEehHHHHHH----HHHHhhcc
Confidence            8875444333    44444445

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.09  E-value=0.0033  Score=57.28  Aligned_cols=38  Identities=26%  Similarity=0.420  Sum_probs=32.6

Q ss_pred             ceeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEee
Q 043833          101 QVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTR  139 (237)
Q Consensus       101 ~l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~  139 (237)
                      .-..-||+++.+.|||- +.|..++.++.|+-+...++.
T Consensus       345 ~qELmfdl~V~A~NPn~-~~V~I~d~dldIFAKS~yvg~  382 (387)
T PF12751_consen  345 EQELMFDLTVEAFNPNW-FTVTIDDMDLDIFAKSRYVGT  382 (387)
T ss_pred             cceEEEeeEEEEECCCe-EEEEeccceeeeEecCCccCc
Confidence            56688999999999997 999999999999987665553

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=96.51  E-value=0.047  Score=46.58  Aligned_cols=103  Identities=12%  Similarity=0.026  Sum_probs=64.4

Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHHhheeeeeeCC--CcEEEEEeeEEee-------eccCC----CceeEEEEEEE
Q 043833           44 QPPTRRNNLLRPLVVAAVAVTVILGCALLIFWLVVRPR--IPEFHLTSLSVSN-------FSTNQ----SQVTGNWDAAI  110 (237)
Q Consensus        44 ~~~~~r~~~~r~l~~~l~~l~lllgi~~~i~~lvlrP~--~P~~~v~s~~v~~-------~n~s~----s~l~~~~~~~l  110 (237)
                      ++++++.+||.|+|.+++++++++++++++++=-=.|+  .-.++++++.+..       +|++-    +.-|.|. +.+
T Consensus        31 ~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~  109 (219)
T PLN03160         31 TRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASF  109 (219)
T ss_pred             cccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeE
Confidence            57789999999999998888888888888776556663  4556666655432       23221    1224455 455


Q ss_pred             EEeCCCceeeEEEeceEEEEEECCEEEeeeecCCceeCCCCce
Q 043833          111 EAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLPPFSQDTRERT  153 (237)
Q Consensus       111 ~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~lp~F~q~~~~~t  153 (237)
                      .-+  |..+.++|+...+    +...+..+.++++.+...+.+
T Consensus       110 ~Y~--~~~~~v~Y~g~~v----G~a~~p~g~~~ar~T~~l~~t  146 (219)
T PLN03160        110 KYS--NTTTTIYYGGTVV----GEARTPPGKAKARRTMRMNVT  146 (219)
T ss_pred             EEc--CeEEEEEECCEEE----EEEEcCCcccCCCCeEEEEEE
Confidence            554  3458899987543    233455555666655555555

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.28
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.2
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.05

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.28  E-value=6e-06  Score=66.82  Aligned_cols=77  Identities=14%  Similarity=0.188  Sum_probs=69.9

Q ss_pred             CCcEEEEEeeEEeeeccCCCceeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEeeeecC-CceeCCCCceEEEEEE
Q 043833           81 RIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLP-PFSQDTRERTPLSAKF  159 (237)
Q Consensus        81 ~~P~~~v~s~~v~~~n~s~s~l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~lp-~F~q~~~~~t~v~~~l  159 (237)
                      +.|+++++++++.+++...    .+|.+.|+++|||. ..+.+..++..+.-+|..|+++..+ ++..++++++.+.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~~----~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv  117 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDG----VDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPV  117 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSS----EEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccce----EEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEE
Confidence            6899999999999886653    88999999999998 9999999999999999999999887 5899999999999988


Q ss_pred             EEe
Q 043833          160 SVI  162 (237)
Q Consensus       160 ~~~  162 (237)
                      +..
T Consensus       118 ~v~  120 (174)
T 1yyc_A          118 KVA  120 (174)
T ss_dssp             EES
T ss_pred             EEE
Confidence            775

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.20  E-value=2.4e-06  Score=67.64  Aligned_cols=103  Identities=15%  Similarity=0.230  Sum_probs=80.1

Q ss_pred             CCcEEEEEeeEEeeeccCCCceeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEeeeecC-CceeCCCCceEEEEEE
Q 043833           81 RIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLP-PFSQDTRERTPLSAKF  159 (237)
Q Consensus        81 ~~P~~~v~s~~v~~~n~s~s~l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~lp-~F~q~~~~~t~v~~~l  159 (237)
                      +.|+++++++++.+++..    ..+|.+.|+++|||. ..+.+..++..+.-+|..++++..+ ++..++++++.+.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~~----~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv   94 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRD----SVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPV   94 (151)
T ss_dssp             CSCCCBCSEEEECCCTTT----EECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECC
T ss_pred             CCCEEEEEEeEEeccCcc----eeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEE
Confidence            679999999999877554    578999999999998 9999999999999999999998887 5889999999999888


Q ss_pred             EEeeeecChHHHHHHHHHh-cCCeEEEEEEEEEEE
Q 043833          160 SVIDSYVERKVLDSINAER-ARGAVKFDFRLEAIA  193 (237)
Q Consensus       160 ~~~~~~l~~~~~~~l~~d~-~~g~v~~~v~v~~~v  193 (237)
                      +..-..     ..++..++ ..+.++.+++.+..+
T Consensus        95 ~v~~~~-----l~~~~~~l~~~~~i~Y~l~g~l~i  124 (151)
T 1xo8_A           95 VVPYSI-----LFNLARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             CEEHHH-----HHHHHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEEHHH-----HHHHHHhcccCCcccEEEEEEEEE
Confidence            776321     12222332 346777777555543

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.05  E-value=6.9e-05  Score=58.20  Aligned_cols=73  Identities=12%  Similarity=0.077  Sum_probs=62.0

Q ss_pred             eeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEeeee-cCCceeCCCCceEEEEEEEEeeeecChHHHHHHH
Q 043833          102 VTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTP-LPPFSQDTRERTPLSAKFSVIDSYVERKVLDSIN  175 (237)
Q Consensus       102 l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~-lp~F~q~~~~~t~v~~~l~~~~~~l~~~~~~~l~  175 (237)
                      -...|.+.|++.|||. +.+.++.++..+..+|..||++. ...+..++.+++.+.+.+..+...+.+...+.+.
T Consensus        16 ~~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~   89 (136)
T 3but_A           16 SQTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIA   89 (136)
T ss_dssp             SEEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHH
T ss_pred             cEEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhh
Confidence            3577999999999997 99999999999999999999987 5689999999999999999887666665444444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	237
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.26

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.26  E-value=7.2e-07  Score=68.80  Aligned_cols=104  Identities=14%  Similarity=0.221  Sum_probs=79.4

Q ss_pred             eCCCcEEEEEeeEEeeeccCCCceeEEEEEEEEEeCCCceeeEEEeceEEEEEECCEEEeeeecC-CceeCCCCceEEEE
Q 043833           79 RPRIPEFHLTSLSVSNFSTNQSQVTGNWDAAIEAYNPNKKMRVSYYDVVSGIYYDGNYLTRTPLP-PFSQDTRERTPLSA  157 (237)
Q Consensus        79 rP~~P~~~v~s~~v~~~n~s~s~l~~~~~~~l~v~NPN~k~~i~Y~~~~~~v~Y~g~~lg~~~lp-~F~q~~~~~t~v~~  157 (237)
                      +=+.|++++.++++.+++..    ..++.+.|++.|||. .++..+.++..++.+|..++++..+ ++..++++++.+.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~----~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~v   92 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD----SVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT----EECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCCCeEEEEEEEeeecccc----eEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEEE
Confidence            44679999999999988664    578999999999998 9999999999999999999998776 57889999999999


Q ss_pred             EEEEeeeecChHHHHHHHHHhc-CCeEEEEEEEEEE
Q 043833          158 KFSVIDSYVERKVLDSINAERA-RGAVKFDFRLEAI  192 (237)
Q Consensus       158 ~l~~~~~~l~~~~~~~l~~d~~-~g~v~~~v~v~~~  192 (237)
                      .++..-..     ...+..++. .+.++.+++....
T Consensus        93 pv~v~~~~-----l~~~~~~i~~~~~i~Y~l~g~l~  123 (151)
T d1xo8a_          93 PVVVPYSI-----LFNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             CCCEEHHH-----HHHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEEHHH-----HHHHHHhhccCCCccEEEEEEEE
Confidence            88765222     223333432 3456655544333